Basic Statistics
Measure | Value |
---|---|
Filename | GF-P1.f.slx.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 24056726 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAG | 1261364 | 5.24329037958033 | No Hit |
GCCGGGCGCGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG | 265704 | 1.1044894471508717 | No Hit |
GGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCA | 155440 | 0.6461394622027952 | No Hit |
ACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATATAAA | 96058 | 0.3992978928221571 | No Hit |
TGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCA | 85765 | 0.3565115219751848 | No Hit |
ATGACCCACCAAACTCATGCATATCACATAGTTAATCCAAGTCCATGACC | 84850 | 0.35270801188823453 | No Hit |
GCCGGGCGCGGTGGCGCACGCCTGTAGTCCTAGCTACTCGGGAGGCTGAG | 76465 | 0.31785289486191926 | No Hit |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATCTCGTATG | 64785 | 0.2693009846809578 | TruSeq Adapter, Index 5 (100% over 49bp) |
ATGCCACAACTAGATACATCAACATGATTTATCACAATTATCTCATCAAT | 43873 | 0.18237311261723646 | No Hit |
CCTATGTTCATTAATCGTTGATTATTCTCAACCAATCACAAAGATATCGG | 36592 | 0.1521071487450121 | No Hit |
TATGGCCTACCCATTCCAACTTGGTCTACAAGACGCCACATCCCCTATTA | 31435 | 0.1306703164844626 | No Hit |
CGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCA | 28102 | 0.11681556334806324 | No Hit |
ATGGCCTACCCATTCCAACTTGGTCTACAAGACGCCACATCCCCTATTAT | 24631 | 0.10238716606740253 | No Hit |
ATGACAAACATACGAAAAACACACCCATTATTTAAAATTATTAACCACTC | 24526 | 0.10195069769676887 | No Hit |
AAAGGTTTGGTCCTGGCCTTATAATTAATTAGAGGTAAAATTACACATGC | 24168 | 0.10046254839498941 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCGCGGT | 41610 | 0.0 | 80.96379 | 6 |
CGCGGTG | 43605 | 0.0 | 77.27874 | 7 |
GGGCGAT | 165635 | 0.0 | 74.47177 | 9 |
CTCCCTC | 152825 | 0.0 | 73.84912 | 94 |
AGGGCGA | 168535 | 0.0 | 73.152115 | 8 |
CGGGCGC | 45925 | 0.0 | 72.90977 | 3 |
GGGCGCG | 46440 | 0.0 | 72.70872 | 4 |
GAGGGCG | 170835 | 0.0 | 72.194305 | 7 |
CCGGGCG | 46595 | 0.0 | 71.09479 | 2 |
ATGTGAG | 170275 | 0.0 | 71.08556 | 3 |
TGAGGGC | 173970 | 0.0 | 70.86396 | 6 |
GTGAGGG | 174540 | 0.0 | 70.66838 | 5 |
GGCGCGG | 48680 | 0.0 | 69.49823 | 5 |
GATGTGA | 174225 | 0.0 | 69.39582 | 2 |
GCGGTGG | 48800 | 0.0 | 69.196915 | 8 |
CGGTGGC | 49150 | 0.0 | 68.70602 | 9 |
GGATGTG | 176340 | 0.0 | 68.57488 | 1 |
GATCGGA | 12840 | 0.0 | 68.09586 | 2 |
AGATCGG | 13110 | 0.0 | 66.67598 | 1 |
TGTGAGG | 185945 | 0.0 | 66.27323 | 4 |