Basic Statistics
Measure | Value |
---|---|
Filename | CON-S10.f.slx.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16681665 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAG | 1063693 | 6.376419859768194 | No Hit |
GCCGGGCGCGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG | 196291 | 1.1766870992793586 | No Hit |
GGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCA | 122498 | 0.7343271789716433 | No Hit |
TGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCA | 63281 | 0.37934462776947026 | No Hit |
ATGACCCACCAAACTCATGCATATCACATAGTTAATCCAAGTCCATGACC | 58184 | 0.34879012376762153 | No Hit |
ACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATATAAA | 34980 | 0.2096912988002097 | No Hit |
CCTATGTTCATTAATCGTTGATTATTCTCAACCAATCACAAAGATATCGG | 30478 | 0.18270358504381906 | No Hit |
ATGCCACAACTAGATACATCAACATGATTTATCACAATTATCTCATCAAT | 27837 | 0.16687183203834868 | No Hit |
TATGGCCTACCCATTCCAACTTGGTCTACAAGACGCCACATCCCCTATTA | 22222 | 0.1332121224110423 | No Hit |
CGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCA | 21689 | 0.13001699770376637 | No Hit |
GGGTGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAG | 18500 | 0.11090020090920182 | No Hit |
ATGGCCTACCCATTCCAACTTGGTCTACAAGACGCCACATCCCCTATTAT | 17360 | 0.10406635069101315 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCGCGGT | 25060 | 0.0 | 78.91112 | 6 |
GGGCGCG | 25260 | 0.0 | 78.34686 | 4 |
GGGCGAT | 136785 | 0.0 | 76.840675 | 9 |
AGGGCGA | 138585 | 0.0 | 75.85641 | 8 |
CGGGCGC | 25935 | 0.0 | 75.69126 | 3 |
CCGGGCG | 25965 | 0.0 | 75.02447 | 2 |
CTCCCTC | 128625 | 0.0 | 75.003426 | 94 |
CGCGGTG | 26360 | 0.0 | 74.98004 | 7 |
GAGGGCG | 140195 | 0.0 | 74.96829 | 7 |
ATGTGAG | 140175 | 0.0 | 73.47563 | 3 |
GTGAGGG | 144765 | 0.0 | 72.57495 | 5 |
TGAGGGC | 145120 | 0.0 | 72.467575 | 6 |
GGCGCGG | 27475 | 0.0 | 72.20172 | 5 |
GATGTGA | 142590 | 0.0 | 72.168564 | 2 |
GGATGTG | 143960 | 0.0 | 71.39656 | 1 |
TGTGAGG | 147495 | 0.0 | 71.167915 | 4 |
GCCGGGC | 28955 | 0.0 | 67.22927 | 1 |
GCGGTGG | 30335 | 0.0 | 65.18607 | 8 |
CGGTGGC | 30550 | 0.0 | 64.65312 | 9 |
GGGATGT | 20690 | 0.0 | 57.481342 | 1 |