Basic Statistics
Measure | Value |
---|---|
Filename | GF-S12.r.slx.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 20066984 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACCT | 279819 | 1.3944247924850093 | No Hit |
GTGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGAC | 116847 | 0.5822848117086254 | No Hit |
GCCTGGAGAATTGGAATTCTTGTTACTCATACTAACAGTGTTGCATCTAT | 60646 | 0.3022178121037023 | No Hit |
CGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACC | 37984 | 0.18928604318416759 | No Hit |
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA | 30817 | 0.1535706611417042 | No Hit |
CGTGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGA | 24687 | 0.12302297146397287 | No Hit |
TGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACC | 24369 | 0.1214382789162537 | No Hit |
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACCTTG | 21913 | 0.1091992698055672 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATACC | 52390 | 0.0 | 59.38159 | 94 |
CGTCTGG | 8810 | 0.0 | 46.193676 | 1 |
GATCGGA | 3490 | 0.0 | 42.409477 | 2 |
AGATCGG | 3765 | 0.0 | 38.818253 | 1 |
ATCGGAA | 3825 | 0.0 | 38.69827 | 3 |
GTCTGGA | 84755 | 0.0 | 34.52108 | 1 |
GGAGTCT | 91950 | 0.0 | 33.9771 | 5 |
GAGTCTT | 92915 | 0.0 | 33.60754 | 6 |
CGTGTCT | 8265 | 0.0 | 33.376114 | 1 |
AGTCTTG | 93660 | 0.0 | 33.32131 | 7 |
TGGAGTC | 94040 | 0.0 | 32.874294 | 4 |
TCTGGAG | 92925 | 0.0 | 31.284218 | 2 |
GTCTTGG | 101140 | 0.0 | 31.025717 | 8 |
CTGGAGT | 101570 | 0.0 | 30.2014 | 3 |
TCTTGGA | 104940 | 0.0 | 29.911045 | 9 |
AGAGCGT | 4875 | 0.0 | 28.145205 | 9 |
CGTATAC | 60515 | 0.0 | 27.000486 | 92-93 |
CGCCGTA | 2340 | 0.0 | 26.609205 | 46-47 |
GTCCCGT | 4765 | 0.0 | 26.332306 | 1 |
TCGTATA | 76225 | 0.0 | 26.178953 | 92-93 |