Basic Statistics
Measure | Value |
---|---|
Filename | GF-S10.f.slx.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 21318541 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAG | 983157 | 4.6117461790654435 | No Hit |
GCCGGGCGCGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG | 160297 | 0.7519135573114502 | No Hit |
ACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATATAAA | 99697 | 0.46765395436770274 | No Hit |
GGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCA | 91892 | 0.43104263091925477 | No Hit |
ATGACCCACCAAACTCATGCATATCACATAGTTAATCCAAGTCCATGACC | 72903 | 0.3419699312443567 | No Hit |
GCCGGGCGCGGTGGCGCACGCCTGTAGTCCTAGCTACTCGGGAGGCTGAG | 56283 | 0.2640096242983983 | No Hit |
TGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCA | 49732 | 0.23328050451482588 | No Hit |
ATGCCACAACTAGATACATCAACATGATTTATCACAATTATCTCATCAAT | 44552 | 0.2089824064414164 | No Hit |
CCTATGTTCATTAATCGTTGATTATTCTCAACCAATCACAAAGATATCGG | 34000 | 0.1594855858100233 | No Hit |
GTATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAG | 31697 | 0.14868278274765612 | No Hit |
TATGGCCTACCCATTCCAACTTGGTCTACAAGACGCCACATCCCCTATTA | 27975 | 0.1312238018539824 | No Hit |
GGGAGAGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTTT | 25499 | 0.11960949860499366 | No Hit |
TCAACATGATTTATCACAATTATCTCATCAATAATTACCCTATTTATCTT | 24968 | 0.11711870901484299 | No Hit |
TGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATCTGG | 24621 | 0.115491017889076 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCGCGGT | 26555 | 0.0 | 83.91635 | 6 |
CGCGGTG | 28140 | 0.0 | 79.2734 | 7 |
GGGCGCG | 28105 | 0.0 | 79.19506 | 4 |
GGGCGAT | 127880 | 0.0 | 78.86417 | 9 |
AGGGCGA | 130475 | 0.0 | 77.30645 | 8 |
GAGGGCG | 132935 | 0.0 | 75.886475 | 7 |
CGGGCGC | 29675 | 0.0 | 74.40268 | 3 |
ATGTGAG | 133220 | 0.0 | 74.044975 | 3 |
CCGGGCG | 29525 | 0.0 | 73.76502 | 2 |
CTCCCTC | 129040 | 0.0 | 73.30866 | 94 |
GTGAGGG | 137810 | 0.0 | 73.02388 | 5 |
TGAGGGC | 138145 | 0.0 | 72.9903 | 6 |
GGCGCGG | 30595 | 0.0 | 72.85837 | 5 |
GATGTGA | 133250 | 0.0 | 71.59615 | 2 |
GGATGTG | 135080 | 0.0 | 70.65607 | 1 |
TGTGAGG | 142890 | 0.0 | 70.41358 | 4 |
CGGTGGC | 33065 | 0.0 | 67.4657 | 9 |
GCGGTGG | 33335 | 0.0 | 67.130714 | 8 |
GCCGGGC | 35790 | 0.0 | 60.83166 | 1 |
ACTAATC | 15830 | 0.0 | 60.30686 | 1 |