Basic Statistics
Measure | Value |
---|---|
Filename | CON-P3.f.slx.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 25826399 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAG | 1091859 | 4.227685787708925 | No Hit |
CAACACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTGACAGATTG | 267197 | 1.0345886780421847 | No Hit |
GCCGGGCGCGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG | 235792 | 0.9129882954259322 | No Hit |
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA | 182244 | 0.7056500598476776 | No Hit |
ACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATATAAA | 94786 | 0.3670120638963256 | No Hit |
TTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGATGTGTTGTT | 87746 | 0.33975313399285745 | No Hit |
CCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAAT | 61401 | 0.23774510724472275 | No Hit |
GTGGAGAAGGGTTCCATGTGAACAGCAGTTGAACATGGGTCAGTCGGTCC | 56427 | 0.21848574398622123 | No Hit |
GGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCA | 55172 | 0.2136263750900774 | No Hit |
AAAGGTTTGGTCCTGGCCTTATAATTAATTAGAGGTAAAATTACACATGC | 52136 | 0.20187096156920678 | No Hit |
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC | 48155 | 0.18645650134964614 | No Hit |
TGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATCTGG | 46080 | 0.17842208664088244 | No Hit |
ATGACCCACCAAACTCATGCATATCACATAGTTAATCCAAGTCCATGACC | 39524 | 0.15303720816827773 | No Hit |
AACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAATAA | 36644 | 0.1418858277532226 | No Hit |
CAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAATA | 33418 | 0.1293947328855254 | No Hit |
TGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCA | 30259 | 0.11716306249276176 | No Hit |
ATGCCACAACTAGATACATCAACATGATTTATCACAATTATCTCATCAAT | 29044 | 0.11245857388016037 | No Hit |
GGACAGCTCTTCTGGAACGGAAAAAACCTTTAATAGTGAATAATTAACAA | 26564 | 0.10285599630052954 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCGCGGT | 27200 | 0.0 | 86.46202 | 6 |
CAACACG | 30990 | 0.0 | 84.49843 | 1 |
AACACGG | 31790 | 0.0 | 82.45564 | 2 |
ACACGGG | 32090 | 0.0 | 81.728745 | 3 |
ATGTGAG | 130715 | 0.0 | 79.97937 | 3 |
CGCGGTG | 29520 | 0.0 | 79.72182 | 7 |
GTGAGGG | 134060 | 0.0 | 79.547874 | 5 |
GAGGGCG | 134230 | 0.0 | 79.54743 | 7 |
TGAGGGC | 134150 | 0.0 | 79.51792 | 6 |
GGATGTG | 135120 | 0.0 | 77.376366 | 1 |
ACGGGAA | 34435 | 0.0 | 77.10519 | 5 |
CACGGGA | 35755 | 0.0 | 74.06141 | 4 |
GCGGTGG | 32000 | 0.0 | 73.617226 | 8 |
CGGGAAA | 36095 | 0.0 | 73.56789 | 6 |
TGTGAGG | 146355 | 0.0 | 72.80418 | 4 |
GGGCGAT | 147035 | 0.0 | 72.628296 | 9 |
GTTGATC | 25835 | 0.0 | 69.975 | 7 |
CTCCCTC | 139130 | 0.0 | 69.78733 | 94 |
AGGGCGA | 155405 | 0.0 | 68.70895 | 8 |
CGGTGGC | 35160 | 0.0 | 67.02918 | 9 |