Basic Statistics
Measure | Value |
---|---|
Filename | GF-S7.r.slx.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 21992041 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACCT | 491085 | 2.2330123884363435 | No Hit |
GTGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGAC | 206293 | 0.9380348099569293 | No Hit |
GCCTGGAGAATTGGAATTCTTGTTACTCATACTAACAGTGTTGCATCTAT | 67054 | 0.3049012140346592 | No Hit |
CGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACC | 56113 | 0.2551513977261137 | No Hit |
TGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACC | 50674 | 0.23041972320804605 | No Hit |
CGTGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGA | 43363 | 0.197175878309794 | No Hit |
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA | 42542 | 0.1934427095693392 | No Hit |
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACCTTG | 42434 | 0.19295162281663625 | No Hit |
GTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACCTTGAGAGC | 35863 | 0.16307263159431176 | No Hit |
TGTGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGA | 35279 | 0.16041712545006623 | No Hit |
GGATGTGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAT | 34068 | 0.15491058788040638 | No Hit |
GGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACCTTGAG | 26757 | 0.12166674298215432 | No Hit |
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 24944 | 0.11342285147613175 | Illumina Single End PCR Primer 1 (100% over 50bp) |
AGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACC | 22169 | 0.10080465019140335 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATACC | 89335 | 0.0 | 60.26384 | 94 |
GATCGGA | 5190 | 0.0 | 55.67378 | 2 |
CGTCTGG | 11505 | 0.0 | 51.218628 | 1 |
ATCGGAA | 5725 | 0.0 | 50.06541 | 3 |
AGATCGG | 5870 | 0.0 | 48.832478 | 1 |
CGTGTCT | 10830 | 0.0 | 40.829887 | 1 |
AGAGCGT | 6965 | 0.0 | 39.263523 | 9 |
AAGAGCG | 7380 | 0.0 | 37.94707 | 8 |
GTCTGGA | 136770 | 0.0 | 36.48462 | 1 |
GGAGTCT | 153695 | 0.0 | 35.0745 | 5 |
GAGTCTT | 154870 | 0.0 | 34.868042 | 6 |
AGTCTTG | 155445 | 0.0 | 34.62514 | 7 |
TGGAGTC | 154985 | 0.0 | 34.59159 | 4 |
TCTGGAG | 145520 | 0.0 | 34.436726 | 2 |
CTGGAGT | 160640 | 0.0 | 32.98552 | 3 |
CGGAAGA | 9260 | 0.0 | 32.477383 | 5 |
GTCTTGG | 168445 | 0.0 | 32.12975 | 8 |
CGCCGTA | 3995 | 0.0 | 31.70247 | 46-47 |
TCTTGGA | 171980 | 0.0 | 31.491117 | 9 |
CGTATCA | 4190 | 0.0 | 30.063604 | 50-51 |