Basic Statistics
Measure | Value |
---|---|
Filename | GF-S12.f.slx.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 20066984 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAG | 702030 | 3.4984330480355195 | No Hit |
GCCGGGCGCGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG | 114792 | 0.5720441098672326 | No Hit |
ACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATATAAA | 68930 | 0.34349955130277676 | No Hit |
GGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCA | 55891 | 0.2785221735363919 | No Hit |
ATGACCCACCAAACTCATGCATATCACATAGTTAATCCAAGTCCATGACC | 45083 | 0.2246625601535338 | No Hit |
GCCGGGCGCGGTGGCGCACGCCTGTAGTCCTAGCTACTCGGGAGGCTGAG | 38862 | 0.19366138927504004 | No Hit |
GGGAGAGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTTT | 33423 | 0.1665571667371639 | No Hit |
TGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCA | 29458 | 0.14679834298965902 | No Hit |
ATGCCACAACTAGATACATCAACATGATTTATCACAATTATCTCATCAAT | 26745 | 0.13327862323506112 | No Hit |
GTATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAG | 23179 | 0.11550814013705298 | No Hit |
TGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATCTGG | 22750 | 0.11337030019060164 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCGCGGT | 18640 | 0.0 | 81.42827 | 6 |
GGGCGAT | 92960 | 0.0 | 79.27741 | 9 |
AGGGCGA | 95370 | 0.0 | 77.23485 | 8 |
CGCGGTG | 19965 | 0.0 | 76.18895 | 7 |
GAGGGCG | 97045 | 0.0 | 75.91649 | 7 |
GGGCGCG | 20220 | 0.0 | 75.3863 | 4 |
ATGTGAG | 98905 | 0.0 | 72.55453 | 3 |
TGAGGGC | 102250 | 0.0 | 72.093346 | 6 |
GTGAGGG | 102200 | 0.0 | 71.928856 | 5 |
CGGGCGC | 21295 | 0.0 | 71.18285 | 3 |
GATGTGA | 98915 | 0.0 | 70.02827 | 2 |
CCGGGCG | 21340 | 0.0 | 69.27563 | 2 |
GGCGCGG | 22185 | 0.0 | 68.79477 | 5 |
GGATGTG | 101135 | 0.0 | 68.47523 | 1 |
TGTGAGG | 107840 | 0.0 | 68.11816 | 4 |
CTCCCTC | 102075 | 0.0 | 67.937035 | 94 |
GCGGTGG | 24690 | 0.0 | 61.608288 | 8 |
CGGTGGC | 25080 | 0.0 | 60.70632 | 9 |
GCCGGGC | 26960 | 0.0 | 54.849205 | 1 |
CTAATCC | 13095 | 0.0 | 49.87152 | 2 |