Basic Statistics
Measure | Value |
---|---|
Filename | GF-S7.f.slx.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 21992041 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAG | 1256969 | 5.715563189428393 | No Hit |
GCCGGGCGCGGTGGCGCACGCCTGTAGTCCTAGCTACTCGGGAGGCTGAG | 147693 | 0.6715747756199618 | No Hit |
GGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCA | 128381 | 0.5837611888773762 | No Hit |
GCCGGGCGCGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG | 128112 | 0.5825380190951809 | No Hit |
ACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATATAAA | 90922 | 0.41343138638200977 | No Hit |
ATGACCCACCAAACTCATGCATATCACATAGTTAATCCAAGTCCATGACC | 87480 | 0.39778026968938446 | No Hit |
TGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCA | 69529 | 0.3161552854507683 | No Hit |
ATGCCACAACTAGATACATCAACATGATTTATCACAATTATCTCATCAAT | 44696 | 0.2032371620260257 | No Hit |
GTATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAG | 41789 | 0.19001874359910478 | No Hit |
CCTATGTTCATTAATCGTTGATTATTCTCAACCAATCACAAAGATATCGG | 34465 | 0.1567157864065459 | No Hit |
TATGGCCTACCCATTCCAACTTGGTCTACAAGACGCCACATCCCCTATTA | 30409 | 0.1382727505828131 | No Hit |
GGGAGAGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTTT | 27487 | 0.12498612566246126 | No Hit |
TGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATCTGG | 25858 | 0.11757890047585852 | No Hit |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATTCCTATCTCGTATG | 24924 | 0.11333190948489046 | TruSeq Adapter, Index 27 (97% over 49bp) |
TCAACATGATTTATCACAATTATCTCATCAATAATTACCCTATTTATCTT | 24314 | 0.11055817875203125 | No Hit |
CGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCA | 23029 | 0.10471515581477864 | No Hit |
ATGGCCTACCCATTCCAACTTGGTCTACAAGACGCCACATCCCCTATTAT | 22838 | 0.10384665979842435 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCGCGGT | 32600 | 0.0 | 82.96964 | 6 |
CGCGGTG | 34290 | 0.0 | 79.05878 | 7 |
GGGCGCG | 34350 | 0.0 | 78.63964 | 4 |
GGGCGAT | 164405 | 0.0 | 78.26207 | 9 |
AGGGCGA | 167275 | 0.0 | 76.90806 | 8 |
CTCCCTC | 158010 | 0.0 | 76.60377 | 94 |
GAGGGCG | 169950 | 0.0 | 75.70859 | 7 |
CGGGCGC | 35455 | 0.0 | 75.604744 | 3 |
ATGTGAG | 169075 | 0.0 | 74.44121 | 3 |
CCGGGCG | 35745 | 0.0 | 74.06064 | 2 |
TGAGGGC | 174425 | 0.0 | 73.71757 | 6 |
GTGAGGG | 174525 | 0.0 | 73.52214 | 5 |
GGCGCGG | 36985 | 0.0 | 73.266914 | 5 |
GATGTGA | 168705 | 0.0 | 72.19042 | 2 |
TGTGAGG | 179660 | 0.0 | 71.42763 | 4 |
GGATGTG | 171130 | 0.0 | 71.20055 | 1 |
GCGGTGG | 39425 | 0.0 | 68.91653 | 8 |
CGGTGGC | 39530 | 0.0 | 68.567055 | 9 |
GCCGGGC | 41685 | 0.0 | 63.40219 | 1 |
CTATGCC | 45555 | 0.0 | 59.531475 | 94 |