Basic Statistics
Measure | Value |
---|---|
Filename | GF-S8.r.slx.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 26439947 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACCT | 497632 | 1.8821217758114268 | No Hit |
GTGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGAC | 219137 | 0.8288102846802228 | No Hit |
GCCTGGAGAATTGGAATTCTTGTTACTCATACTAACAGTGTTGCATCTAT | 98901 | 0.37405899489889294 | No Hit |
CGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACC | 61829 | 0.2338469135357949 | No Hit |
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA | 45616 | 0.17252682087448964 | No Hit |
TGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACC | 43187 | 0.16333996433502684 | No Hit |
CGTGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGA | 41842 | 0.158252964727955 | No Hit |
GGATGTGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAT | 36448 | 0.13785201611788406 | No Hit |
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACCTTG | 35659 | 0.13486789515879136 | No Hit |
TGTGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGA | 30320 | 0.1146749651200133 | No Hit |
GGTGGCTGCTTTTAGGCCTACAATGGTTAAAAGCTGTTTTGTTAATTATT | 26915 | 0.10179672447906192 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATACC | 84545 | 0.0 | 63.573383 | 94 |
CGTCTGG | 13295 | 0.0 | 50.581654 | 1 |
GATCGGA | 5150 | 0.0 | 50.544468 | 2 |
ATCGGAA | 5835 | 0.0 | 44.77532 | 3 |
AGATCGG | 5940 | 0.0 | 43.829353 | 1 |
GTCTGGA | 136935 | 0.0 | 36.974667 | 1 |
CGTGTCT | 12465 | 0.0 | 36.38118 | 1 |
GGAGTCT | 149160 | 0.0 | 36.10816 | 5 |
GAGTCTT | 150850 | 0.0 | 35.745754 | 6 |
AGTCTTG | 151655 | 0.0 | 35.50131 | 7 |
TGGAGTC | 151160 | 0.0 | 35.347534 | 4 |
AGAGCGT | 7165 | 0.0 | 35.085487 | 9 |
CGTTCGA | 3410 | 0.0 | 34.862305 | 8 |
TCTGGAG | 147870 | 0.0 | 34.323784 | 2 |
ACGTTCG | 3475 | 0.0 | 33.942913 | 7 |
GTCTTGG | 162035 | 0.0 | 33.4009 | 8 |
CTGGAGT | 159070 | 0.0 | 33.32453 | 3 |
TCTTGGA | 167180 | 0.0 | 32.35612 | 9 |
GTGTCTG | 76130 | 0.0 | 30.03093 | 1 |
AAGAGCG | 8675 | 0.0 | 29.574205 | 8 |