CON-P3.f.slx.gz FastQC Report

Basic Statistics

Measure	Value
Filename	CON-P3.f.slx.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	25826399
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAG	1091859	4.227685787708925	No Hit
CAACACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTGACAGATTG	267197	1.0345886780421847	No Hit
GCCGGGCGCGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG	235792	0.9129882954259322	No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA	182244	0.7056500598476776	No Hit
ACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATATAAA	94786	0.3670120638963256	No Hit
TTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGATGTGTTGTT	87746	0.33975313399285745	No Hit
CCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAAT	61401	0.23774510724472275	No Hit
GTGGAGAAGGGTTCCATGTGAACAGCAGTTGAACATGGGTCAGTCGGTCC	56427	0.21848574398622123	No Hit
GGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCA	55172	0.2136263750900774	No Hit
AAAGGTTTGGTCCTGGCCTTATAATTAATTAGAGGTAAAATTACACATGC	52136	0.20187096156920678	No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC	48155	0.18645650134964614	No Hit
TGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATCTGG	46080	0.17842208664088244	No Hit
ATGACCCACCAAACTCATGCATATCACATAGTTAATCCAAGTCCATGACC	39524	0.15303720816827773	No Hit
AACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAATAA	36644	0.1418858277532226	No Hit
CAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAATA	33418	0.1293947328855254	No Hit
TGGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCA	30259	0.11716306249276176	No Hit
ATGCCACAACTAGATACATCAACATGATTTATCACAATTATCTCATCAAT	29044	0.11245857388016037	No Hit
GGACAGCTCTTCTGGAACGGAAAAAACCTTTAATAGTGAATAATTAACAA	26564	0.10285599630052954	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	27200	86.46202	6
CAACACG	30990	84.49843	1
AACACGG	31790	82.45564	2
ACACGGG	32090	81.728745	3
ATGTGAG	130715	79.97937	3
CGCGGTG	29520	79.72182	7
GTGAGGG	134060	79.547874	5
GAGGGCG	134230	79.54743	7
TGAGGGC	134150	79.51792	6
GGATGTG	135120	77.376366	1
ACGGGAA	34435	77.10519	5
CACGGGA	35755	74.06141	4
GCGGTGG	32000	73.617226	8
CGGGAAA	36095	73.56789	6
TGTGAGG	146355	72.80418	4
GGGCGAT	147035	72.628296	9
GTTGATC	25835	69.975	7
CTCCCTC	139130	69.78733	94
AGGGCGA	155405	68.70895	8
CGGTGGC	35160	67.02918	9