CHROM POS REF ALT FILTER EFFECT CODON CODON_POS CALLS_Guinea MISSING_Guinea PERCENT_CALLED_Guinea REF_COUNT_Guinea ALT_COUNT_Guinea CALLS_Ghana MISSING_Ghana PERCENT_CALLED_Ghana REF_COUNT_Ghana ALT_COUNT_Ghana CALLS_DR_of_the_Congo MISSING_DR_of_the_Congo PERCENT_CALLED_DR_of_the_Congo REF_COUNT_DR_of_the_Congo ALT_COUNT_DR_of_the_Congo CALLS_Malawi MISSING_Malawi PERCENT_CALLED_Malawi REF_COUNT_Malawi ALT_COUNT_Malawi CALLS_Cambodia MISSING_Cambodia PERCENT_CALLED_Cambodia REF_COUNT_Cambodia ALT_COUNT_Cambodia CALLS_Thailand MISSING_Thailand PERCENT_CALLED_Thailand REF_COUNT_Thailand ALT_COUNT_Thailand CALLS_Guyana MISSING_Guyana PERCENT_CALLED_Guyana REF_COUNT_Guyana ALT_COUNT_Guyana Pf3D7_14_v3 1571068 G A PASS missense_variant atG/atA 3 44 6 0.88 43 1 18 3 0.857142857142857 18 0 50 0 1 50 0 43 7 0.86 43 0 48 2 0.96 48 0 45 3 0.9375 45 0 25 15 0.625 25 0 Pf3D7_14_v3 1571083 A G PASS synonymous_variant gaA/gaG 3 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 50 0 43 7 0.86 41 2 48 2 0.96 48 0 45 3 0.9375 45 0 25 15 0.625 25 0 Pf3D7_14_v3 1571183 T C PASS missense_variant Ttt/Ctt 1 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 49 1 43 7 0.86 43 0 48 2 0.96 48 0 45 3 0.9375 45 0 26 14 0.65 26 0 Pf3D7_14_v3 1571203 G A PASS missense_variant atG/atA 3 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 50 0 43 7 0.86 42 1 48 2 0.96 48 0 45 3 0.9375 45 0 27 13 0.675 27 0 Pf3D7_14_v3 1571227 G C PASS missense_variant atG/atC 3 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 50 0 43 7 0.86 43 0 48 2 0.96 46 2 45 3 0.9375 45 0 27 13 0.675 27 0 Pf3D7_14_v3 1571303 G A PASS missense_variant Gac/Aac 1 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 49 1 43 7 0.86 43 0 48 2 0.96 48 0 45 3 0.9375 45 0 27 13 0.675 27 0 Pf3D7_14_v3 1571313 C T PASS missense_variant gCa/gTa 2 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 50 0 43 7 0.86 42 1 48 2 0.96 48 0 45 3 0.9375 45 0 27 13 0.675 27 0 Pf3D7_14_v3 1571362 C T PASS synonymous_variant gaC/gaT 3 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 50 0 43 7 0.86 42 1 48 2 0.96 48 0 45 3 0.9375 45 0 27 13 0.675 27 0 Pf3D7_14_v3 1571363 A G PASS missense_variant Agg/Ggg 1 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 50 0 43 7 0.86 43 0 48 2 0.96 47 1 45 3 0.9375 42 3 27 13 0.675 27 0 Pf3D7_14_v3 1571385 A T PASS missense_variant gAa/gTa 2 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 47 3 43 7 0.86 43 0 48 2 0.96 48 0 45 3 0.9375 45 0 26 14 0.65 26 0 Pf3D7_14_v3 1571400 T C PASS missense_variant gTa/gCa 2 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 50 0 43 7 0.86 42 1 48 2 0.96 48 0 45 3 0.9375 45 0 27 13 0.675 27 0 Pf3D7_14_v3 1571424 A G PASS missense_variant tAt/tGt 2 44 6 0.88 44 0 18 3 0.857142857142857 17 1 50 0 1 50 0 43 7 0.86 43 0 48 2 0.96 48 0 45 3 0.9375 45 0 27 13 0.675 27 0 Pf3D7_14_v3 1571450 C T PASS missense_variant Cca/Tca 1 44 6 0.88 43 1 18 3 0.857142857142857 18 0 50 0 1 50 0 43 7 0.86 43 0 48 2 0.96 48 0 45 3 0.9375 45 0 28 12 0.7 28 0 Pf3D7_14_v3 1571462 C G PASS missense_variant Cgc/Ggc 1 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 50 0 43 7 0.86 42 1 48 2 0.96 48 0 45 3 0.9375 45 0 28 12 0.7 28 0 Pf3D7_14_v3 1571497 G C PASS synonymous_variant gcG/gcC 3 44 6 0.88 44 0 18 3 0.857142857142857 17 1 50 0 1 49 1 43 7 0.86 42 1 48 2 0.96 48 0 45 3 0.9375 45 0 28 12 0.7 28 0 Pf3D7_14_v3 1571556 C T PASS missense_variant gCc/gTc 2 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 49 1 43 7 0.86 43 0 48 2 0.96 48 0 45 3 0.9375 45 0 27 13 0.675 27 0 Pf3D7_14_v3 1571710 A G PASS synonymous_variant ttA/ttG 3 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 50 0 43 7 0.86 42 1 48 2 0.96 48 0 45 3 0.9375 45 0 27 13 0.675 27 0 Pf3D7_14_v3 1572674 A G PASS missense_variant+splice_region_variant aAt/aGt 2 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 50 0 43 7 0.86 42 1 48 2 0.96 48 0 45 3 0.9375 45 0 24 16 0.6 24 0 Pf3D7_14_v3 1572864 G A PASS synonymous_variant acG/acA 3 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 50 0 43 7 0.86 42 1 48 2 0.96 48 0 45 3 0.9375 45 0 24 16 0.6 20 4 Pf3D7_14_v3 1572868 G A PASS missense_variant Gta/Ata 1 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 49 1 43 7 0.86 43 0 48 2 0.96 48 0 45 3 0.9375 45 0 25 15 0.625 25 0 Pf3D7_14_v3 1573287 C T PASS synonymous_variant acC/acT 3 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 49 1 43 7 0.86 42 1 48 2 0.96 48 0 45 3 0.9375 45 0 20 20 0.5 20 0 Pf3D7_14_v3 1573805 A C PASS missense_variant Aca/Cca 1 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 50 0 43 7 0.86 42 1 48 2 0.96 48 0 45 3 0.9375 45 0 22 18 0.55 22 0 Pf3D7_14_v3 1573876 A G PASS synonymous_variant ttA/ttG 3 44 6 0.88 42 2 18 3 0.857142857142857 18 0 50 0 1 50 0 43 7 0.86 43 0 48 2 0.96 48 0 45 3 0.9375 45 0 25 15 0.625 25 0 Pf3D7_14_v3 1573885 T G PASS synonymous_variant acT/acG 3 44 6 0.88 43 1 18 3 0.857142857142857 18 0 50 0 1 50 0 43 7 0.86 43 0 48 2 0.96 48 0 45 3 0.9375 45 0 25 15 0.625 25 0 Pf3D7_14_v3 1573989 T C PASS missense_variant tTt/tCt 2 44 6 0.88 44 0 18 3 0.857142857142857 18 0 50 0 1 49 1 43 7 0.86 43 0 48 2 0.96 48 0 45 3 0.9375 45 0 23 17 0.575 23 0