Predicted mutations
position mutation annotation gene description
574,068 IS150 (–) +3 bp coding (1179‑1181/1449 nt) cusS ← sensory histidine kinase in two‑component regulatory system with CusR, senses copper ions
590,047 Δ2,297 bp IS150‑mediated hokE[entD] hokE, insL‑3, [entD]
735,580 G→T A234D (GCC→GAC)  gltA ← citrate synthase
736,619 T→C intergenic (‑339/‑370) gltA ← / → sdhC citrate synthase/succinate dehydrogenase cytochrome b556 large membrane subunit
923,149 IS150 (–) +3 bp coding (509‑511/831 nt) ybjR → predicted amidase and lipoprotein
1,004,636 G→A R154C (CGT→TGT)  ompF ← outer membrane porin 1a (Ia;b;F)
1,236,018 IS150 (–) +2 bp :: +TC intergenic (‑130/‑90) nhaB ← / → fadR sodium/proton antiporter/fatty acid metabolism regulator
1,294,964 IS3 (–) +4 bp :: +TC intergenic (‑315/‑286) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase
1,334,535 A→C M126L (ATG→CTG)  cysB → DNA‑binding transcriptional dual regulator, O‑acetyl‑L‑serine‑binding
1,457,389 Δ14,145 bp IS150‑mediated hrpA[ydcI] hrpA, ydcF, aldA, gapC, insA‑12, insB‑12, cybB, ydcA, hokB, mokB, insK‑2, insJ‑2, trg, [ydcI]
position mutation annotation gene description
1,640,803 IS150 (–) +3 bp coding (761‑763/855 nt) ynfH → oxidoreductase, membrane subunit
1,887,034 IS150 (+) +3 bp intergenic (‑3/‑154) yobG ← / → ECB_01797 hypothetical protein/hypothetical protein
1,902,189 IS150 (–) +3 bp coding (664‑666/873 nt) yebZ ← predicted inner membrane protein
2,302,013 G→A A556T (GCG→ACG)  pta → phosphate acetyltransferase
2,347,259 IS150 (–) +3 bp coding (287‑289/1347 nt) fadL → long‑chain fatty acid outer membrane transporter
2,963,466 Δ13,009 bp IS150‑mediated ECB_02837[yghK] ECB_02837, ECB_02838, yghF, yghG, pppA, yghJ, [yghK]
3,501,576 IS150 (+) +3 bp intergenic (‑35/‑354) yhiO ← / → uspA universal stress protein UspB/universal stress global response regulator
3,975,518 IS150 (–) +3 bp coding (322‑324/1242 nt) yihS ← predicted glucosamine isomerase
4,188,718 C→T M225I (ATG→ATA yjcF ← hypothetical protein
4,260,612 IS150 (–) +3 bp coding (208‑210/1518 nt) lysU ← lysine tRNA synthetase, inducible
position mutation annotation gene description
4,343,098 Δ1,446 bp IS150‑mediated insK‑2insJ‑2 insK‑2, insJ‑2