product nonamer_count mean_NB sd_NB SE_NB sum_NB nonamer_epitope_count prop_product_hit random_replicate_count random_NB_per_codon_sd random_NB_per_codon_SE random_NB_per_codon_Q1 random_NB_per_codon_Q3 sample_type NB_per_codon NB_per_codon_LOW NB_per_codon_HIGH S 1259 49.732327243844324 35.175765729534895 0.9913584099352073 62613 1195 0.949166004765687 1000 3.787904069002404 0.11978404416267205 33.54821286735505 48.30047656870532 Observed 49.732327243844324 47.78926476037132 51.67538972731733 S 1259 49.732327243844324 35.175765729534895 0.9913584099352073 62613 1195 0.949166004765687 1000 3.787904069002404 0.11978404416267205 33.54821286735505 48.30047656870532 Expected (randomized peptide) 41.04994598888006 33.54821286735505 48.30047656870532 S-i1 26 11.538461538461538 5.43492976389406 1.0658774200423862 300 24 0.9230769230769231 1000 7.548160250230709 0.23869378534675537 0 28.28 Observed 11.538461538461538 9.449341795178462 13.627581281744614 S-i1 26 11.538461538461538 5.43492976389406 1.0658774200423862 300 24 0.9230769230769231 1000 7.548160250230709 0.23869378534675537 0 28.28 Expected (randomized peptide) 6.6486 0 28.28 S-i2 18 7.5 3.417085101111076 0.8054146822957206 135 17 0.9444444444444444 1000 7.915166551829733 0.2502995436336315 0 28.013235294117635 Observed 7.5 5.921387222700387 9.078612777299613 S-i2 18 7.5 3.417085101111076 0.8054146822957206 135 17 0.9444444444444444 1000 7.915166551829733 0.2502995436336315 0 28.013235294117635 Expected (randomized peptide) 6.604 0 28.013235294117635 3a 261 34.47892720306513 34.433164586776854 2.1313593808158715 8999 248 0.9501915708812261 1000 7.484390715537813 0.2366772155971686 25.094348659003835 54.763888888888886 Observed 34.47892720306513 30.301462816666024 38.65639158946424 3a 261 34.47892720306513 34.433164586776854 2.1313593808158715 8999 248 0.9501915708812261 1000 7.484390715537813 0.2366772155971686 25.094348659003835 54.763888888888886 Expected (randomized peptide) 38.761961685823756 25.094348659003835 54.763888888888886 3c 28 29.321428571428573 16.73995789947485 3.1635546828358305 821 27 0.9642857142857143 1000 14.276508490413352 0.45146283864438336 2.331481481481482 56.085185185185175 Observed 29.321428571428573 23.120861393070346 35.521995749786804 3c 28 29.321428571428573 16.73995789947485 3.1635546828358305 821 27 0.9642857142857143 1000 14.276508490413352 0.45146283864438336 2.331481481481482 56.085185185185175 Expected (randomized peptide) 20.977888888888888 2.331481481481482 56.085185185185175 3d 43 5.5813953488372094 6.765573069520829 1.0317402205826982 240 25 0.5813953488372093 1000 6.792562925639171 0.21479969995036718 0 23.66046511627906 Observed 5.5813953488372094 3.559184516495121 7.603606181179298 3d 43 5.5813953488372094 6.765573069520829 1.0317402205826982 240 25 0.5813953488372093 1000 6.792562925639171 0.21479969995036718 0 23.66046511627906 Expected (randomized peptide) 5.090348837209302 0 23.66046511627906 3d-2 20 0 0 0 0 0 0 1000 5.253440182139748 0.16612836527011426 0 17.84473684210526 Observed 0 0 0 3d-2 20 0 0 0 0 0 0 1000 5.253440182139748 0.16612836527011426 0 17.84473684210526 Expected (randomized peptide) 2.341157894736842 0 17.84473684210526 3b 9 1.5555555555555556 1.7400510848184252 0.5800170282728084 14 5 0.5555555555555556 1000 5.322618975385327 0.16831599079449328 0 18.506249999999994 Observed 1.5555555555555556 0.41872218014085116 2.69238893097026 3b 9 1.5555555555555556 1.7400510848184252 0.5800170282728084 14 5 0.5555555555555556 1000 5.322618975385327 0.16831599079449328 0 18.506249999999994 Expected (randomized peptide) 3.036375 0 18.506249999999994 E 61 20.81967213114754 32.8001566036512 4.199629712841874 1270 61 1 1000 13.597792948938183 0.4299999687002233 3.851229508196721 55.54508196721311 Observed 20.81967213114754 12.588397893977469 29.050946368317614 E 61 20.81967213114754 32.8001566036512 4.199629712841874 1270 61 1 1000 13.597792948938183 0.4299999687002233 3.851229508196721 55.54508196721311 Expected (randomized peptide) 23.28739344262295 3.851229508196721 55.54508196721311 M 208 37.69230769230769 29.77486438656273 2.0645153897257416 7840 192 0.9230769230769231 1000 8.395436863823718 0.26548702441823824 19.969831730769233 53.89206730769231 Observed 37.69230769230769 33.64585752844524 41.738757856170146 M 208 37.69230769230769 29.77486438656273 2.0645153897257416 7840 192 0.9230769230769231 1000 8.395436863823718 0.26548702441823824 19.969831730769233 53.89206730769231 Expected (randomized peptide) 35.05339423076923 19.969831730769233 53.89206730769231 6 47 40.95744680851064 19.813211936799746 2.890053990707278 1925 47 1 1000 16.563198725135294 0.5237743330942473 13.935106382978722 78.2191489361702 Observed 40.95744680851064 35.292940986724375 46.6219526302969 6 47 40.95744680851064 19.813211936799746 2.890053990707278 1925 47 1 1000 16.563198725135294 0.5237743330942473 13.935106382978722 78.2191489361702 Expected (randomized peptide) 41.56004255319149 13.935106382978722 78.2191489361702 7a 107 33.78504672897196 30.76356213806074 2.9740258051886945 3615 100 0.9345794392523364 1000 11.739486947077907 0.37123517314582755 11.354672897196261 56.23364485981308 Observed 33.78504672897196 27.955956150802123 39.6141373071418 7a 107 33.78504672897196 30.76356213806074 2.9740258051886945 3615 100 0.9345794392523364 1000 11.739486947077907 0.37123517314582755 11.354672897196261 56.23364485981308 Expected (randomized peptide) 31.175897196261683 11.354672897196261 56.23364485981308 7b 29 1.793103448275862 3.098148183590915 0.5753116746745339 52 9 0.3103448275862069 1000 7.919591118230812 0.2504394607084921 0 28.280172413793096 Observed 1.793103448275862 0.6654925659137756 2.9207143306379484 7b 29 1.793103448275862 3.098148183590915 0.5753116746745339 52 9 0.3103448275862069 1000 7.919591118230812 0.2504394607084921 0 28.280172413793096 Expected (randomized peptide) 6.165620689655173 0 28.280172413793096 8 107 31.35514018691589 26.65299457013478 2.576642239328523 3355 105 0.9813084112149533 1000 12.162779630760278 0.38462086311904237 11.336448598130842 58.62149532710278 Observed 31.35514018691589 26.304921397831983 36.405358975999796 8 107 31.35514018691589 26.65299457013478 2.576642239328523 3355 105 0.9813084112149533 1000 12.162779630760278 0.38462086311904237 11.336448598130842 58.62149532710278 Expected (randomized peptide) 32.42254205607477 11.336448598130842 58.62149532710278 N 405 33.97530864197531 29.317726579632126 1.4568095461735517 13760 377 0.9308641975308642 1000 5.5640695391113555 0.1759513280315521 26.307283950617286 48.02524691358025 Observed 33.97530864197531 31.11996193147515 36.830655352475475 N 405 33.97530864197531 29.317726579632126 1.4568095461735517 13760 377 0.9308641975308642 1000 5.5640695391113555 0.1759513280315521 26.307283950617286 48.02524691358025 Expected (randomized peptide) 36.540844444444446 26.307283950617286 48.02524691358025 9b 83 49.265060240963855 25.056562519651507 2.7503150428549588 4089 83 1 1000 12.116803488455396 0.3831669698419279 20.8144578313253 67.31596385542169 Observed 49.265060240963855 43.874442756968136 54.655677724959574 9b 83 49.265060240963855 25.056562519651507 2.7503150428549588 4089 83 1 1000 12.116803488455396 0.3831669698419279 20.8144578313253 67.31596385542169 Expected (randomized peptide) 41.637277108433736 20.8144578313253 67.31596385542169 9c 59 26.694915254237287 19.26069271974449 2.507528609919818 1575 57 0.9661016949152542 1000 10.722466787231488 0.3390741718315955 0.9322033898305084 40.7957627118644 Observed 26.694915254237287 21.780159178794445 31.60967132968013 9c 59 26.694915254237287 19.26069271974449 2.507528609919818 1575 57 0.9661016949152542 1000 10.722466787231488 0.3390741718315955 0.9322033898305084 40.7957627118644 Expected (randomized peptide) 14.638254237288136 0.9322033898305084 40.7957627118644 10 24 5.375 11.794665337973036 2.407575980410437 129 10 0.4166666666666667 1000 18.914523790158512 0.598129760343416 1.25 71.91770833333334 Observed 5.375 0.6561510783955438 10.093848921604456 10 24 5.375 11.794665337973036 2.407575980410437 129 10 0.4166666666666667 1000 18.914523790158512 0.598129760343416 1.25 71.91770833333334 Expected (randomized peptide) 26.74020833333333 1.25 71.91770833333334