peakID Chr Start End Strand Detailed.Annotation Distance.to.TSS ID Gene.Name Gene.Alias Gene.Description Gene.Type peak.group peak48 1 283870 284932 + promoter-TSS (AT1G01790.2) 51 AT1G01790 KEA1 ATKEA1|K+ EFFLUX ANTIPORTER 1|K+ efflux antiporter 1|T1N6.21|T1N6_21 K+ efflux antiporter 1 protein-coding common peak56 1 330156 330904 + TTS (AT1G01950.1) 5151 AT1G01950 ARK2 Arabidopsis thaliana KINESIN Ungrouped clade|AtKINUb|F22M8.8|F22M8_8|armadillo repeat kinesin 2|gene B armadillo repeat kinesin 2 protein-coding VNsp peak160 1 1011049 1011415 + promoter-TSS (AT1G03940.1) -87 AT1G03940 AT1G03940 F21M11.13|F21M11_13 HXXXD-type acyl-transferase family protein protein-coding common peak170 1 1085764 1086936 + exon (AT1G04160.1, exon 1 of 38) 180 AT1G04160 XIB ARABIDOPSIS THALIANA MYOSIN XI B|ATXIB|F20D22.7|F20D22_7|MYOSIN XI B|MYOSIN XI-8|XI-8|XI-B|myosin XI B myosin XI B protein-coding VNsp peak180 1 1148847 1149419 + promoter-TSS (AT1G04290.2) -600 AT1G04290 AT1G04290 F19P19.27|F19P19_27 Thioesterase superfamily protein protein-coding common peak188 1 1214191 1214876 + exon (AT1G04470.1, exon 1 of 5) 308 AT1G04470 AT1G04470 F19P19.7|F19P19_7 hypothetical protein (DUF810) protein-coding VNsp peak316 1 1990152 1990361 + promoter-TSS (AT1G04473.1) -98 AT1G04473 AT1G04473 - ncRNA ncRNA common peak340 1 2110695 2111079 + TTS (AT1G06890.2) 260 AT1G04527 AT1G04527 - ncRNA ncRNA VNsp peak529 1 3126290 3126721 + promoter-TSS (AT1G04713.1) -896 AT1G04713 AT1G04713 - ncRNA ncRNA common peak575 1 3361932 3362253 + promoter-TSS (AT1G04783.1) -80 AT1G04783 AT1G04783 - ncRNA ncRNA common peak206 1 1344472 1345503 + promoter-TSS (AT1G04790.1) -2 AT1G04790 AT1G04790 F13M7.22|F13M7_22 RING/U-box superfamily protein protein-coding common peak212 1 1368478 1369547 + promoter-TSS (AT1G04850.1) -72 AT1G04850 AT1G04850 F13M7.16|F13M7_16 ubiquitin-associated (UBA)/TS-N domain-containing protein protein-coding common peak225 1 1435353 1436359 + exon (AT1G05020.1, exon 1 of 1) 1907 AT1G05020 AT1G05020 T7A14.11|T7A14_11 ENTH/ANTH/VHS superfamily protein protein-coding VNsp peak227 1 1441295 1441505 + promoter-TSS (AT1G05030.1) 17 AT1G05030 AT1G05030 T7A14.10|T7A14_10 Major facilitator superfamily protein protein-coding VNsp peak980 1 5355479 5358495 + TTS (AT1G05173.1) 613 AT1G05173 AT1G05173 - ncRNA ncRNA common peak1067 1 5837323 5838479 + promoter-TSS (AT1G05287.1) -10 AT1G05287 AT1G05287 - ncRNA ncRNA common peak1433 1 7773292 7774517 + TTS (AT1G22050.1) -1322 AT1G05703 AT1G05703 - ncRNA ncRNA common peak1570 1 8539881 8540576 + promoter-TSS (AT1G24145.1) 80 AT1G05857 AT1G05857 - ncRNA ncRNA VNsp peak287 1 1836825 1838605 + promoter-TSS (AT1G06070.1) 43 AT1G06070 AT1G06070 T21E18.12|T21E18_12|bZIP69|basic leucine-zipper 69 Basic-leucine zipper (bZIP) transcription factor family protein protein-coding common peak1742 1 9571515 9572471 + promoter-TSS (AT1G06097.1) -462 AT1G06097 AT1G06097 - ncRNA ncRNA common peak290 1 1854935 1855629 + promoter-TSS (AT1G06120.1) 96 AT1G06110 SKIP16 SKP1/ASK-interacting protein 16|T21E18.16|T21E18_16 SKP1/ASK-interacting protein 16 protein-coding common peak291 1 1855843 1856534 + promoter-TSS (AT1G06110.1) 278 AT1G06120 AT1G06120 T21E18.17|T21E18_17 Fatty acid desaturase family protein protein-coding common peak294 1 1867662 1869145 + TTS (AT1G06150.2) 502 AT1G06143 AT1G06143 - basic helix loop helix DNA-binding superfamily protein protein-coding common peak295 1 1875655 1875867 + TTS (AT1G06148.1) 1767 AT1G06148 AT1G06148 - hypothetical protein protein-coding VNsp peak296 1 1876752 1877981 + exon (AT1G06148.2, exon 1 of 3) 162 AT1G06148 AT1G06148 - hypothetical protein protein-coding common peak2031 1 11241445 11241837 + promoter-TSS (AT1G31380.1) 412 AT1G06437 AT1G06437 - ncRNA ncRNA common peak2073 1 11494879 11495953 + TTS (AT1G06493.1) 691 AT1G06493 AT1G06493 - ncRNA ncRNA common peak2119 1 11737807 11740920 + promoter-TSS (AT1G06573.1) -44 AT1G06573 AT1G06573 - ncRNA ncRNA common peak2189 1 12217642 12218844 + promoter-TSS (AT1G06697.1) 95 AT1G06697 AT1G06697 - ncRNA ncRNA common peak329 1 2054988 2055900 + promoter-TSS (AT1G04493.1) 103 AT1G06700 AT1G06700 F4H5.21|F4H5_21 Protein kinase superfamily protein protein-coding VNsp peak2193 1 12230778 12231191 + Intergenic -2022 AT1G06707 AT1G06707 - ncRNA ncRNA common peak332 1 2070399 2070732 + promoter-TSS (AT1G06740.1) -172 AT1G06740 MUG3 F4H5.17|F4H5_17|MUSTANG 3 MuDR family transposase protein-coding VNsp peak2252 1 12643993 12645459 + promoter-TSS (AT1G06777.1) -844 AT1G06777 AT1G06777 - ncRNA ncRNA common peak337 1 2096509 2096790 + promoter-TSS (AT1G06820.2) -104 AT1G06820 CRTISO CAROTENOID AND CHLOROPLAST REGULATION 2|CAROTENOID ISOMERASE|CCR2|F4H5.10|F4H5_10|carotenoid isomerase carotenoid isomerase protein-coding VNsp peak2273 1 12922733 12925503 + TTS (AT1G06837.1) 1113 AT1G06837 AT1G06837 - ncRNA ncRNA VNsp peak2281 1 12996463 12996670 + exon (AT1G06883.1, exon 1 of 1) 147 AT1G06883 AT1G06883 - ncRNA ncRNA VNsp peak2299 1 13107407 13107872 + promoter-TSS (AT1G35540.1) 597 AT1G06907 AT1G06907 - ncRNA ncRNA VNsp peak2325 1 13498540 13499163 + Intergenic -2235 AT1G06963 AT1G06963 - ncRNA ncRNA VNsp peak2334 1 13637004 13638077 + Intergenic 1867 AT1G06967 AT1G06967 - ncRNA ncRNA VNsp peak2351 1 13839012 13840007 + promoter-TSS (AT1G06983.1) -422 AT1G06983 AT1G06983 - ncRNA ncRNA VNsp peak2354 1 13877485 13878417 + Intergenic 5737 AT1G06993 AT1G06993 - ncRNA ncRNA VNsp peak2355 1 13880234 13881094 + Intergenic 8450 AT1G06993 AT1G06993 - ncRNA ncRNA VNsp peak2368 1 14095255 14095620 + Intergenic 18216 AT1G07007 AT1G07007 - ncRNA ncRNA VNsp peak2369 1 14096559 14096956 + Intergenic 16896 AT1G07007 AT1G07007 - ncRNA ncRNA VNsp peak2370 1 14108590 14108853 + Intergenic 4932 AT1G07007 AT1G07007 - ncRNA ncRNA common peak2371 1 14118094 14118591 + Intergenic -4689 AT1G07007 AT1G07007 - ncRNA ncRNA VNsp peak2380 1 14284906 14286512 + TTS (AT1G07027.1) 494 AT1G07027 AT1G07027 - ncRNA ncRNA common peak2381 1 14288254 14288493 + Intergenic -2170 AT1G07027 AT1G07027 - ncRNA ncRNA VNsp peak2415 1 15857205 15857633 + Intergenic 27806 AT1G07117 AT1G07117 - ncRNA ncRNA VNsp peak2416 1 15860620 15861094 + Intergenic 24368 AT1G07117 AT1G07117 - ncRNA ncRNA VNsp peak2417 1 15878938 15879135 + Intergenic 6189 AT1G07117 AT1G07117 - ncRNA ncRNA VNsp peak2487 1 16637186 16638251 + Intergenic -7826 AT1G07233 AT1G07233 - ncRNA ncRNA common peak2488 1 16640888 16641283 + Intergenic -4459 AT1G07233 AT1G07233 - ncRNA ncRNA VNsp peak2489 1 16643333 16643946 + Intergenic -1905 AT1G07233 AT1G07233 - ncRNA ncRNA common peak2563 1 17295466 17296015 + exon (AT1G07323.1, exon 1 of 1) 267 AT1G07323 AT1G07323 - ncRNA ncRNA common peak370 1 2260208 2260844 + promoter-TSS (AT1G07350.6) -339 AT1G07350 SR45a F22G5.31|F22G5_31|serine/arginine rich-like protein 45a RNA-binding (RRM/RBD/RNP motifs) family protein protein-coding common peak2583 1 17386524 17386836 + promoter-TSS (ENSRNA049757649-T1) -115 at1g07357 common peak2696 1 18126849 18127077 + Intergenic 1324 AT1G07523 AT1G07523 - ncRNA ncRNA common peak2734 1 18332834 18333701 + promoter-TSS (AT1G07567.1) 314 AT1G07563 AT1G07563 - ncRNA ncRNA common peak390 1 2394972 2397295 + exon (AT1G07728.2, exon 1 of 2) 1139 AT1G07725 EXO70H6 ATEXO70H6|exocyst subunit exo70 family protein H6 exocyst subunit exo70 family protein H6 protein-coding common peak2893 1 19117534 19118726 + TTS (AT1G51540.1) 449 AT1G07753 AT1G07753 - ncRNA ncRNA VNsp peak2913 1 19232109 19233830 + promoter-TSS (AT1G51810.1) 490 AT1G07767 AT1G07767 - ncRNA ncRNA common peak2933 1 19355192 19355948 + TTS (AT1G07777.1) 1048 AT1G07777 AT1G07777 - ncRNA ncRNA common peak2936 1 19373068 19374653 + exon (AT1G07783.1, exon 1 of 1) 542 AT1G07783 AT1G07783 - ncRNA ncRNA common peak395 1 2420241 2421113 + TTS (AT1G07820.1) 1389 AT1G07820 AT1G07820 F24B9.8 Histone superfamily protein protein-coding common peak2973 1 19589306 19589674 + promoter-TSS (AT1G52600.1) -566 AT1G07823 AT1G07823 - ncRNA ncRNA common peak397 1 2427836 2428292 + TTS (AT1G07870.2) 1359 AT1G07850 AT1G07850 F24B9.5|F24B9_5 transferring glycosyl group transferase (DUF604) protein-coding common peak402 1 2454333 2455203 + promoter-TSS (AT1G07920.1) -3 AT1G07920 AT1G07920 T6D22.2|T6D22_2 GTP binding Elongation factor Tu family protein protein-coding common peak3092 1 20261783 20262806 + TTS (AT1G54270.1) 1983 AT1G07957 AT1G07957 - ncRNA ncRNA VNsp peak411 1 2498663 2499762 + promoter-TSS (AT1G08040.2) -448 AT1G08040 AT1G08040 T6D22.12|T6D22_12 trimethylguanosine synthase (DUF707) protein-coding common peak3183 1 20798950 20799616 + TTS (AT1G08063.1) 704 AT1G08063 AT1G08063 - ncRNA ncRNA common peak419 1 2534715 2535408 + promoter-TSS (AT1G08110.4) -190 AT1G08110 AT1G08110 T6D22.20|T6D22_20 lactoylglutathione lyase family protein / glyoxalase I family protein protein-coding common peak3286 1 21260937 21261499 + promoter-TSS (AT1G08133.1) -821 AT1G08133 AT1G08133 - ncRNA ncRNA VNsp peak431 1 2588516 2589358 + promoter-TSS (AT1G08260.1) 83 AT1G08260 TIL1 ABA OVERLY SENSITIVE 4|ABO4|EARLY IN SHORT DAYS 7|EMB142|EMB2284|EMB529|EMBRYO DEFECTIVE 142|EMBRYO DEFECTIVE 2284|EMBRYO DEFECTIVE 529|ESD7|POL2A|T23G18.21|T23G18_21|TILTED 1 DNA polymerase epsilon catalytic subunit protein-coding common peak433 1 2606692 2608215 + promoter-TSS (AT1G08270.1) 54 AT1G08270 AT1G08270 T23G18.12|T23G18_12 vacuolar protein sorting-associated protein protein-coding common peak3495 1 22606399 22606791 + promoter-TSS (AT1G08367.1) -191 AT1G08367 U12*$ - ncRNA ncRNA VNsp peak442 1 2657034 2658008 + TTS (AT1G08420.1) -1081 AT1G08430 ALMT1 ARABIDOPSIS THALIANA ALUMINUM-ACTIVATED MALATE TRANSPORTER 1|ATALMT1|T27G7.11|T27G7_11|aluminum-activated malate transporter 1 aluminum-activated malate transporter 1 protein-coding common peak444 1 2683926 2684768 + promoter-TSS (AT1G08470.1) 171 AT1G08480 SDH6 T27G7.26|succinate dehydrogenase 6 succinate dehydrogenase subunit protein-coding common peak3578 1 23025910 23026683 + TTS (AT1G62305.3) -2107 AT1G08497 AT1G08497 - ncRNA ncRNA common peak3580 1 23033793 23034962 + promoter-TSS (AT1G08513.1) -312 AT1G08513 AT1G08513 - ncRNA ncRNA common peak3610 1 23179075 23181084 + promoter-TSS (AT1G08543.1) -11 AT1G08543 AT1G08543 - ncRNA ncRNA common peak450 1 2706438 2707007 + promoter-TSS (AT1G08550.3) -146 AT1G08550 NPQ1 ARABIDOPSIS VIOLAXANTHIN DE-EPOXIDASE 1|AVDE1|F22O13.3|F22O13_3|VIOLAXANTHIN DE-EPOXIDASE PRECURSOR|non-photochemical quenching 1 non-photochemical quenching 1 protein-coding VNsp peak3759 1 23973100 23973292 + promoter-TSS (AT1G08707.1) -912 AT1G08707 AT1G08707 - ncRNA ncRNA VNsp peak466 1 2778797 2779931 + promoter-TSS (AT1G08730.2) -74 AT1G08730 XIC ATXIC|F22O13.200|F22O13_200|MYOSIN XI C Myosin family protein with Dil domain-containing protein protein-coding common peak3802 1 24229852 24230500 + promoter-TSS (AT1G08747.1) 393 AT1G08747 AT1G08747 - ncRNA ncRNA VNsp peak3877 1 24556491 24558639 + promoter-TSS (AT1G08803.1) -547 AT1G08803 AT1G08803 - ncRNA ncRNA common peak474 1 2835865 2836796 + intron (AT1G08840.5, intron 7 of 25) 2139 AT1G08840 emb2411 embryo defective 2411 DNA replication helicase protein-coding VNsp peak3968 1 24954959 24955937 + exon (AT1G66880.3, exon 5 of 5) -1460 AT1G08857 AT1G08857 - ncRNA ncRNA common peak3997 1 25143890 25145505 + promoter-TSS (AT1G67220.1) -348 AT1G08913 AT1G08913 - ncRNA ncRNA common peak4090 1 25613604 25614249 + TTS (AT1G68340.3) -1043 AT1G08977 AT1G08977 - ncRNA ncRNA common peak489 1 2896492 2897174 + exon (AT1G09010.1, exon 9 of 11) 2613 AT1G09010 AT1G09010 F7G19.12|F7G19_12 glycoside hydrolase family 2 protein protein-coding common peak503 1 2964083 2965408 + promoter-TSS (AT1G09180.1) -278 AT1G09180 SARA1A ATSAR1|ATSARA1A|SECRETION-ASSOCIATED RAS 1|T12M4.12|T12M4_12|secretion-associated RAS super family 1 secretion-associated RAS super family 1 protein-coding common peak4375 1 26873079 26874062 + promoter-TSS (AT1G71300.1) 175 AT1G09227 AT1G09227 - ncRNA ncRNA common peak534 1 3146771 3147965 + promoter-TSS (AT1G09720.1) -65 AT1G09720 NET2B F21M12.11|F21M12_11|Networked 2B Kinase interacting (KIP1-like) family protein protein-coding VNsp peak561 1 3278737 3279466 + promoter-TSS (AT1G10040.2) 95 AT1G10050 AT1G10050 ATXYN2|T27I1.7|T27I1_7 glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein protein-coding common peak585 1 3412569 3413393 + promoter-TSS (AT1G10390.2) -107 AT1G10390 AT1G10390 F14N23.29|F14N23_29 Nucleoporin autopeptidase protein-coding common peak601 1 3511309 3512735 + TTS (AT1G10630.1) 299 AT1G10620 PERK11 AtPERK11|F20B24.6|F20B24_6|proline-rich extensin-like receptor kinase 11 Protein kinase superfamily protein protein-coding VNsp peak607 1 3541483 3543852 + intron (AT1G10680.1, intron 3 of 12) 1115 AT1G10680 PGP10 ABCB10|ATP-binding cassette B10|F20B24.12|F20B24_12|P-glycoprotein 10 P-glycoprotein 10 protein-coding common peak614 1 3568543 3571373 + intron (AT1G10740.2, intron 2 of 6) 880 AT1G10740 AT1G10740 T16B5.12|T16B5_12 alpha/beta-Hydrolases superfamily protein protein-coding common peak618 1 3593143 3593417 + promoter-TSS (AT1G10770.1) -700 AT1G10770 AT1G10770 T16B5.9 Plant invertase/pectin methylesterase inhibitor superfamily protein protein-coding common peak623 1 3630518 3631511 + TTS (AT1G10890.4) 2933 AT1G10890 AT1G10890 T19D16.19|T19D16_19 arginine/glutamate-rich 1 protein protein-coding VNsp peak625 1 3643361 3643590 + TTS (AT1G10920.3) 3640 AT1G10910 EMB3103 EMBRYO DEFECTIVE 3103|T19D16.17|T19D16_17 Pentatricopeptide repeat (PPR) superfamily protein protein-coding VNsp peak646 1 3760723 3761534 + promoter-TSS (AT1G11220.1) 37 AT1G11220 AT1G11220 T28P6.12|T28P6_12 cotton fiber, putative (DUF761) protein-coding common peak652 1 3774422 3775808 + Intergenic -2121 AT1G11260 STP1 ATSTP1|SUGAR TRANSPORTER 1|T28P6.9|T28P6_9|sugar transporter 1 sugar transporter 1 protein-coding common peak658 1 3816252 3816789 + TTS (AT1G11350.1) 696 AT1G11340 AT1G11340 T28P6.1|T28P6_1 G-type lectin S-receptor-like Serine/Threonine-kinase protein-coding common peak697 1 4003121 4004105 + promoter-TSS (AT1G11870.6) -144 AT1G11870 SRS ATSRS|F12F1.29|F12F1_29|OVA7|SERYL-TRNA SYNTHETASE|Seryl-tRNA synthetase|ovule abortion 7 Seryl-tRNA synthetase protein-coding common peak737 1 4174048 4174260 + TTS (AT1G12280.1) 2119 AT1G12270 Hop1 F5O11.2|F5O11_2 stress-inducible protein protein-coding common peak766 1 4326390 4327062 + promoter-TSS (AT1G12700.3) -349 AT1G12700 RPF1 RNA processing factor 1|T12C24.31|T12C24_31 RNA processing FACTOR protein-coding common peak768 1 4334330 4334805 + promoter-TSS (AT1G12730.1) -17 AT1G12730 AT1G12730 T12C24.26|T12C24_26 GPI transamidase subunit PIG-U protein-coding common peak771 1 4346300 4347284 + exon (AT1G12750.6, exon 3 of 6) 153 AT1G12750 RBL6 ATRBL6|RHOMBOID-like protein 6|T12C24.28|T12C24_28 RHOMBOID-like protein 6 protein-coding VNsp peak774 1 4365146 4365835 + promoter-TSS (AT1G12800.1) -76 AT1G12800 AT1G12800 F13K23.5|F13K23_5 Nucleic acid-binding, OB-fold-like protein protein-coding common peak798 1 4469265 4469787 + TTS (AT1G13110.1) 2432 AT1G13110 CYP71B7 ''cytochrome P450|F3F19.13|F3F19_13|cytochrome P450|family 71 subfamily B|polypeptide 7|polypeptide 7'' cytochrome P450, family 71 subfamily B, polypeptide 7 protein-coding common peak803 1 4492563 4493189 + promoter-TSS (AT1G13170.1) -209 AT1G13170 ORP1D F3F19.19|F3F19_19|OSBP(oxysterol binding protein)-related protein 1D OSBP(oxysterol binding protein)-related protein 1D protein-coding common peak821 1 4567065 4567929 + promoter-TSS (AT1G13330.1) 253 AT1G13320 PP2AA3 65 KDA REGULATORY SUBUNIT OF PROTEIN PHOSPHATASE 2A|PR65|T6J4.8|T6J4_8|protein phosphatase 2A subunit A3|protein phosphatase 2A subunit A3 protein phosphatase 2A subunit A3 protein-coding common peak842 1 4679694 4680584 + promoter-TSS (AT1G13640.1) -277 AT1G13640 AT1G13640 F21F23.8|F21F23_8 Phosphatidylinositol 3- and 4-kinase family protein protein-coding common peak851 1 4724464 4725092 + TTS (AT1G13770.4) 234 AT1G13780 AT1G13780 F16A14.1|F16A14_1 F-box/RNI-like/FBD-like domains-containing protein protein-coding common peak880 1 4854464 4855711 + promoter-TSS (AT1G14205.1) 200 AT1G14200 AT1G14200 F7A19.29|F7A19_29 RING/U-box superfamily protein protein-coding common peak914 1 5012754 5013783 + intron (AT1G14610.1, intron 4 of 20) 1265 AT1G14610 TWN2 T5E21.11|T5E21_11|TWIN 2|VALRS|VALYL TRNA SYNTHETASE valyl-tRNA synthetase / valine-tRNA ligase (VALRS) protein-coding common peak932 1 5098085 5098437 + promoter-TSS (AT1G14790.1) 9 AT1G14790 RDR1 ATRDRP1|AtRDR1|F10B6.19|F10B6_19|RNA-dependent RNA polymerase 1 RNA-dependent RNA polymerase 1 protein-coding VNsp peak985 1 5380684 5381577 + promoter-TSS (AT1G15660.1) 98 AT1G15660 CENP-C CENP-C HOMOLOGUE|T16N11.16|T16N11_16|centromere protein C centromere protein C protein-coding common peak990 1 5403986 5404586 + promoter-TSS (AT1G15700.1) 156 AT1G15710 AT1G15710 F7H2.5|F7H2_5 prephenate dehydrogenase family protein protein-coding common peak1006 1 5488894 5489730 + promoter-TSS (AT1G15970.2) 167 AT1G15980 PnsB1 NAD(P)H DEHYDROGENASE SUBUNIT 48|NDF1|NDH-dependent cyclic electron flow 1|NDH48|Photosynthetic NDH subcomplex B 1|T24D18.8|T24D18_8 NDH-dependent cyclic electron flow 1 protein-coding common peak1045 1 5705014 5706247 + promoter-TSS (AT1G16690.1) -267 AT1G16690 AT1G16690 F19K19.2|F19K19_2 Enhancer of polycomb-like transcription factor protein protein-coding common peak1072 1 5862473 5862906 + promoter-TSS (AT1G17145.2) 54 AT1G17145 AT1G17145 - RING/U-box superfamily protein protein-coding common peak1079 1 5899710 5900423 + promoter-TSS (AT1G17255.1) 84 AT1G17255 AT1G17255 - ncRNA ncRNA common peak1080 1 5911244 5911874 + exon (AT1G17270.2, exon 1 of 4) 136 AT1G17270 AT1G17270 F20D23.3|F20D23_3 O-fucosyltransferase family protein protein-coding VNsp peak1081 1 5916458 5916818 + TTS (AT1G17280.3) 3226 AT1G17280 UBC34 F20D23.1|F20D23_1|ubiquitin-conjugating enzyme 34 ubiquitin-conjugating enzyme 34 protein-coding common peak1121 1 6140642 6141107 + Intergenic -1528 AT1G17840 ABCG11 ARABIDOPSIS THALIANA WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11|ATP-binding cassette G11|ATWBC11|AtABCG11|COF1|CUTICULAR DEFECT AND ORGAN FUSION 1|DESPERADO|DSO|F2H15.7|F2H15_7|WBC11|white-brown complex homolog protein 11 white-brown complex-like protein protein-coding VNsp peak1123 1 6153723 6154736 + promoter-TSS (AT1G17880.1) -247 AT1G17880 BTF3 ATBTF3|F2H15.11|F2H15_11|basic transcription factor 3 basic transcription factor 3 protein-coding common peak1124 1 6155005 6156175 + exon (AT1G17890.2, exon 1 of 1) 206 AT1G17890 GER2 F2H15.12|F2H15_12 NAD(P)-binding Rossmann-fold superfamily protein protein-coding common peak1131 1 6210032 6210918 + promoter-TSS (AT1G18040.1) -947 AT1G18040 CDKD1;3 AT;CDCKD;3|CAK2AT|CYCLIN-DEPENDENT KINASE D1;3|T10F20.5|T10F20_5|cyclin-dependent kinase D1;3 cyclin-dependent kinase D1;3 protein-coding common peak1139 1 6261137 6262387 + promoter-TSS (AT1G18190.1) -261 AT1G18190 GC2 T10F20.19|golgin candidate 2 golgin Putative 2 protein-coding common peak1143 1 6276107 6276565 + TTS (AT1G18250.2) 1814 AT1G18250 ATLP-1 - Pathogenesis-related thaumatin superfamily protein protein-coding VNsp peak1160 1 6376557 6378643 + TTS (AT1G18530.1) 977 AT1G18530 AT1G18530 F25I16.13|F25I16_13 EF hand calcium-binding protein family protein-coding VNsp peak1164 1 6405381 6406013 + promoter-TSS (AT1G18610.2) 90 AT1G18610 AT1G18610 F25I16.5|F25I16_5 Galactose oxidase/kelch repeat superfamily protein protein-coding common peak1181 1 6483398 6485047 + promoter-TSS (AT1G18800.1) -576 AT1G18800 NRP2 F6A14.10|F6A14_10|NAP1-related protein 2 NAP1-related protein 2 protein-coding common peak1191 1 6543528 6544618 + exon (AT1G18940.1, exon 1 of 2) 292 AT1G18940 AT1G18940 F14D16.8|F14D16_8 Nodulin-like / Major Facilitator Superfamily protein protein-coding common peak1195 1 6559812 6560921 + TTS (AT1G19000.2) 195 AT1G18990 AT1G18990 F14D16.14|F14D16_14 myosin-binding protein, putative (Protein of unknown function, DUF593) protein-coding VNsp peak1201 1 6589762 6590659 + TTS (AT1G19086.1) 375 AT1G19090 RKF2 CRK1|CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 1|F14D16.24|F14D16_24|receptor-like serine/threonine kinase 2 receptor-like serine/threonine kinase 2 protein-coding VNsp peak1202 1 6592892 6593113 + TTS (AT1G19090.1) -1881 AT1G19100 DMS11 AtMORC6|DEFECTIVE IN MERISTEM SILENCING 11|F14D16.25|F14D16_25|MORC6|Microrchidia 6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein protein-coding VNsp peak1223 1 6709467 6710489 + promoter-TSS (AT1G19397.1) 200 AT1G19396 AT1G19396 - hypothetical protein protein-coding common peak1243 1 6835837 6836828 + promoter-TSS (AT1G19780.2) 301 AT1G19780 CNGC8 ATCNGC8|F14P1.12|F14P1_12|cyclic nucleotide gated channel 8|cyclic nucleotide gated channel 8 cyclic nucleotide gated channel 8 protein-coding common peak1263 1 6914882 6915072 + TTS (AT1G19910.1) 1846 AT1G19920 APS2 ASA1|ATP SULFURYLASE ARABIDOPSIS 1|ATP SULFURYLASE PRECURSOR|F6F9.2|F6F9_2 Pseudouridine synthase/archaeosine transglycosylase-like family protein protein-coding common peak1268 1 6926298 6926958 + exon (AT1G19950.1, exon 7 of 7) -1108 AT1G19960 AT1G19960 T20H2.25|T20H2_25 transcription factor protein-coding common peak1288 1 7022871 7023609 + promoter-TSS (AT1G20270.3) -78 AT1G20270 AT1G20270 F14O10.12|F14O10_12 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein protein-coding common peak1296 1 7065115 7066173 + TTS (AT1G20380.2) 4202 AT1G20380 AT1G20380 F14O10.2|F14O10_2 Prolyl oligopeptidase family protein protein-coding common peak1305 1 7137367 7138307 + promoter-TSS (AT1G20610.1) -9 AT1G20610 CYCB2;3 Cyclin B2;3|F5M15.6 Cyclin B2;3 protein-coding common peak1316 1 7201854 7202443 + TTS (AT1G20740.2) 1754 AT1G20740 AT1G20740 F2D10.23|F2D10_23 transport/golgi organization-like protein (DUF833) protein-coding VNsp peak1317 1 7208093 7210091 + promoter-TSS (AT1G20750.1) -79 AT1G20750 AT1G20750 F2D10.24|F2D10_24 RAD3-like DNA-binding helicase protein protein-coding common peak1320 1 7227424 7227949 + promoter-TSS (AT1G20795.1) -120 AT1G20795 AT1G20795 - F-box family protein protein-coding common peak1330 1 7281046 7281657 + promoter-TSS (AT1G20910.2) -115 AT1G20910 AT1G20910 F9H16.11|F9H16_11 ARID/BRIGHT DNA-binding domain-containing protein protein-coding common peak1361 1 7411973 7414027 + promoter-TSS (AT1G21170.2) -50 AT1G21170 SEC5B - Exocyst complex component SEC5 protein-coding common peak1366 1 7442464 7443732 + TTS (AT1G21250.1) -1651 AT1G21270 WAK2 F16F4.5|F16F4_5|wall-associated kinase 2 wall-associated kinase 2 protein-coding common peak1395 1 7587035 7588945 + promoter-TSS (AT1G21640.2) -424 AT1G21640 NADK2 ATNADK2|F8K7.5|F8K7_5|NAD KINASE 2|NAD kinase 2 NAD kinase 2 protein-coding common peak1396 1 7600399 7600987 + promoter-TSS (AT1G21650.2) 8 AT1G21650 SECA2 F8K7.7|F8K7_7 Preprotein translocase SecA family protein protein-coding common peak1402 1 7620130 7620656 + TTS (AT1G21695.1) 1531 AT1G21695 AT1G21695 - hydroxyproline-rich glycoprotein family protein protein-coding VNsp peak1409 1 7653935 7654618 + TTS (AT1G21780.1) 188 AT1G21790 AT1G21790 F8K7.23|F8K7_23 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein protein-coding common peak1442 1 7813998 7818148 + promoter-TSS (AT1G22140.2) -351 AT1G22140 AT1G22140 F2E2.21|F2E2_21 zinc finger CCCH domain protein protein-coding common peak1456 1 7907865 7908743 + TTS (AT1G22403.2) 1205 AT1G22403 AT1G22403 - ncRNA ncRNA common peak1474 1 8015276 8016505 + intron (AT1G22650.1, intron 1 of 4) 260 AT1G22650 A/N-InvD T22J18.18|T22J18_18|alkaline/neutral invertase D Plant neutral invertase family protein protein-coding common peak1481 1 8053615 8056655 + promoter-TSS (AT1G22760.1) -190 AT1G22760 PAB3 POLY(A) BINDING PROTEIN 3|T22J18.7|T22J18_7|poly(A) binding protein 3 poly(A) binding protein 3 protein-coding common peak1526 1 8271652 8272667 + promoter-TSS (AT1G23310.1) -138 AT1G23310 GGT1 ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1|AOAT1|F26F24.16|F26F24_16|GGAT1|GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE|GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE 1|glutamate:glyoxylate aminotransferase glutamate:glyoxylate aminotransferase protein-coding common peak1537 1 8329329 8330145 + promoter-TSS (AT1G23465.1) -187 AT1G23465 AT1G23465 - Peptidase S24/S26A/S26B/S26C family protein protein-coding common peak1566 1 8527186 8528409 + promoter-TSS (AT1G24100.1) 83 AT1G24110 AT1G24110 F3I6.3|F3I6_3 Peroxidase superfamily protein protein-coding common peak1581 1 8591939 8592283 + promoter-TSS (AT1G24256.1) 33 AT1G24256 AT1G24256 - hypothetical protein protein-coding common peak1590 1 8639716 8640964 + promoter-TSS (AT1G24360.1) 147 AT1G24350 AT1G24350 F3I6.29|F3I6_29 Acid phosphatase/vanadium-dependent haloperoxidase-related protein protein-coding common peak1594 1 8663628 8664193 + promoter-TSS (AT1G24450.1) -187 AT1G24450 NFD2 F21J9.11|NUCLEAR FUSION DEFECTIVE 2 Ribonuclease III family protein protein-coding common peak1597 1 8681991 8682543 + promoter-TSS (AT1G24490.2) 33 AT1G24490 ALB4 ALBINA 4|ARABIDOPSIS THALIANA ENVELOPE MEMBRANE INTEGRASE|ARTEMIS|F21J9.16 OxaA/YidC-like membrane insertion protein protein-coding common peak1604 1 8723650 8724712 + exon (AT1G24620.1, exon 1 of 1) 530 AT1G24620 AT1G24620 F21J9.28 EF hand calcium-binding protein family protein-coding VNsp peak1607 1 8737248 8738264 + TTS (AT1G24650.1) -2449 AT1G24660 AT1G24660 - hypothetical protein protein-coding VNsp peak1610 1 8764085 8764912 + Intergenic -1029 AT1G24764 MAP70-2 ATMAP70-2|F5A9.19|F5A9_19|microtubule-associated proteins 70-2 microtubule-associated proteins 70-2 protein-coding common peak1611 1 8794337 8794894 + Intergenic 5795 AT1G24996 AT1G24996 F5A9.10|F5A9_10 hypothetical protein protein-coding VNsp peak1615 1 8846617 8847043 + TTS (AT1G25240.1) 1599 AT1G25240 AT1G25240 F4F7.37|F4F7_37 ENTH/VHS/GAT family protein protein-coding common peak1624 1 8903090 8904461 + promoter-TSS (AT1G25375.1) -347 AT1G25375 AT1G25375 - Metallo-hydrolase/oxidoreductase superfamily protein protein-coding common peak1628 1 8935033 8935993 + promoter-TSS (AT1G25440.1) 31 AT1G25440 BBX15 B-box domain protein 15|F2J7.10|F2J7_10 B-box type zinc finger protein with CCT domain-containing protein protein-coding VNsp peak1643 1 9003909 9004863 + intron (AT1G25682.1, intron 1 of 6) 299 AT1G25682 AT1G25682 F14G11.11|F14G11_11 coiled-coil protein (DUF572) protein-coding common peak1644 1 9019495 9020554 + promoter-TSS (AT1G26090.1) -356 AT1G26090 AT1G26090 F14G11.6 P-loop containing nucleoside triphosphate hydrolases superfamily protein protein-coding common peak1645 1 9027541 9028327 + promoter-TSS (AT1G26110.1) 21 AT1G26110 DCP5 F14G11.8|F14G11_8|decapping 5 decapping 5 protein-coding common peak1647 1 9032247 9033913 + promoter-TSS (AT1G26130.3) 64 AT1G26130 AT1G26130 F28B23.19|F28B23_19 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein protein-coding common peak1654 1 9082446 9083135 + Intergenic -1048 AT1G26250 AT1G26250 F28B23.9|F28B23_9 Proline-rich extensin-like family protein protein-coding common peak1662 1 9125176 9125883 + promoter-TSS (AT1G26370.1) 49 AT1G26370 AT1G26370 RID1|ROOT INITIATION DEFECTIVE 1|T1K7.25|T1K7_25 RNA helicase family protein protein-coding common peak1670 1 9183760 9185289 + promoter-TSS (AT1G26580.1) -43 AT1G26580 AT1G26580 T1K7.5|T1K7_5 ELM2 domain protein protein-coding common peak1678 1 9225264 9226147 + promoter-TSS (AT1G26690.1) 87 AT1G26690 AT1G26690 T24P13.7|T24P13_7 emp24/gp25L/p24 family/GOLD family protein protein-coding common peak1680 1 9246314 9247880 + promoter-TSS (AT1G26740.1) 240 AT1G26750 AT1G26750 T24P13.13|T24P13_13 hypothetical protein protein-coding common peak1681 1 9253028 9253841 + promoter-TSS (AT1G26762.1) -165 AT1G26762 AT1G26762 - transmembrane protein protein-coding common peak1700 1 9357296 9358976 + TTS (AT1G26960.1) -1189 AT1G26970 AT1G26970 T2P11.16 Protein kinase superfamily protein protein-coding common peak1701 1 9373310 9374484 + promoter-TSS (AT1G27000.1) 12 AT1G27000 AT1G27000 T2P11.17 GRIP/coiled-coil protein, putative (DUF1664) protein-coding common peak1731 1 9519964 9521243 + TTS (AT1G27430.1) 1536 AT1G27420 AT1G27420 F17L21.21|F17L21_21 Galactose oxidase/kelch repeat superfamily protein protein-coding VNsp peak1735 1 9544078 9544836 + promoter-TSS (AT1G27480.1) 47 AT1G27480 AT1G27480 F17L21.27|F17L21_27 alpha/beta-Hydrolases superfamily protein protein-coding common peak1736 1 9551190 9551864 + TTS (AT1G27500.1) 2392 AT1G27500 KLCR3 F17L21.29|F17L21_29|kinesin light chain-related 3 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding common peak1748 1 9626784 9627502 + TTS (AT1G27670.1) 1606 AT1G27670 AT1G27670 T22C5.12|T22C5_12 transmembrane protein protein-coding common peak1763 1 9708262 9709330 + promoter-TSS (AT1G27880.1) -65 AT1G27880 AT1G27880 F28L5.4|F28L5_4 DEAD/DEAH box RNA helicase family protein protein-coding common peak1771 1 9745422 9747232 + promoter-TSS (AT1G27970.1) -382 AT1G27970 NTF2B F13K9.26|F13K9_26|nuclear transport factor 2B nuclear transport factor 2B protein-coding common peak1772 1 9757589 9758269 + promoter-TSS (AT1G28000.1) 34 AT1G28000 AT1G28000 F13K9.10|F13K9_10 Pentatricopeptide repeat (PPR) superfamily protein protein-coding common peak1777 1 9778246 9779771 + promoter-TSS (AT1G28050.1) 5 AT1G28060 AT1G28060 F13K9.16|F13K9_16|RDM16|RNA-directed DNA methylation 16 Pre-mRNA-splicing factor 3 protein-coding common peak1782 1 9812774 9813512 + exon (AT1G28120.1, exon 10 of 10) 2417 AT1G28120 AT1G28120 F13K9.21|F13K9_21 ubiquitin thioesterase otubain-like protein protein-coding common peak1792 1 9871400 9872998 + promoter-TSS (AT1G28240.1) 79 AT1G28240 AT1G28240 F3H9.11|F3H9_11 strawberry notch protein (DUF616) protein-coding common peak1812 1 9978854 9980843 + promoter-TSS (AT1G28410.1) -55 AT1G28410 AT1G28410 F3M18.15|F3M18_15 myosin heavy chain-like protein protein-coding common peak1818 1 9999683 10000262 + exon (AT1G28440.1, exon 2 of 2) 3259 AT1G28440 HSL1 F3M18.12|F3M18_12|HAESA-like 1 HAESA-like 1 protein-coding common peak1824 1 10037002 10038120 + TTS (AT1G28560.2) 311 AT1G28550 RABA1i AtRABA1i|F3M18.2|RAB GTPase homolog A1I RAB GTPase homolog A1I protein-coding VNsp peak1829 1 10081021 10082386 + promoter-TSS (AT1G28690.1) -99 AT1G28690 AT1G28690 F1K23.11|F1K23_11 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding common peak1830 1 10087460 10088623 + exon (AT1G28710.1, exon 1 of 3) 425 AT1G28710 AT1G28710 F1K23.9|F1K23_9 Nucleotide-diphospho-sugar transferase family protein protein-coding common peak1831 1 10088717 10089683 + promoter-TSS (AT1G28710.1) 107 AT1G28710 AT1G28710 F1K23.9|F1K23_9 Nucleotide-diphospho-sugar transferase family protein protein-coding VNsp peak1853 1 10195105 10195597 + promoter-TSS (AT1G29170.1) -138 AT1G29170 WAVE2 ATSCAR3|F28N24.14|F28N24_14|SCAR3|WASP (WISKOTT-ALDRICH SYNDROME PROTEIN)-FAMILY VERPROLIN HOMOLOGOUS PROTEIN 2 SCAR family protein protein-coding common peak1855 1 10207095 10208351 + promoter-TSS (AT1G29200.1) -99 AT1G29200 AT1G29200 F28N24.11|F28N24_11 O-fucosyltransferase family protein protein-coding common peak1857 1 10214018 10215493 + promoter-TSS (AT1G29230.1) 74 AT1G29230 CIPK18 ATCIPK18|ATWL1|CBL-interacting protein kinase 18|F28N24.9|F28N24_9|SNF1-RELATED PROTEIN KINASE 3.20|SnRK3.20|WL1|WPL4-LIKE 1 CBL-interacting protein kinase 18 protein-coding common peak1868 1 10265739 10267069 + exon (AT1G29340.1, exon 1 of 1) 2361 AT1G29340 PUB17 ARABIDOPSIS THALIANA PLANT U-BOX 17|ATPUB17|F15D2.34|F15D2_34|plant U-box 17 plant U-box 17 protein-coding common peak1869 1 10273928 10277762 + promoter-TSS (AT1G29357.1) -80 AT1G29357 AT1G29357 - ncRNA ncRNA common peak1871 1 10284160 10284726 + exon (AT1G29380.2, exon 2 of 2) 943 AT1G29380 AT1G29380 F15D2.1|F15D2_1 Carbohydrate-binding X8 domain superfamily protein protein-coding common peak1873 1 10289228 10289678 + TTS (AT1G29400.1) 213 AT1G29395 COR413IM1 COLD REGULATED 314 INNER MEMBRANE 1|COLD REGULATED 314 THYLAKOID MEMBRANE 1|COR413-TM1|COR414-TM1|cold regulated 414 thylakoid membrane 1 COLD REGULATED 314 INNER MEMBRANE 1 protein-coding common peak1881 1 10349257 10350246 + TTS (AT1G29620.1) 285 AT1G29630 AT1G29630 F15D2.37|F15D2_37 5'-3' exonuclease family protein protein-coding common peak1886 1 10378139 10379636 + promoter-TSS (AT1G29680.1) 74 AT1G29680 AT1G29680 F15D2.23|F15D2_23 histone acetyltransferase (DUF1264) protein-coding common peak1887 1 10387171 10388274 + promoter-TSS (AT1G29700.2) 208 AT1G29710 AT1G29710 T3M22.4|T3M22_4 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding common peak1890 1 10413103 10414445 + promoter-TSS (AT1G29740.1) -655 AT1G29740 AT1G29740 F1N18.20|F1N18_20 Leucine-rich repeat transmembrane protein kinase protein-coding VNsp peak1901 1 10477366 10478882 + TTS (AT1G29940.1) 239 AT1G29930 CAB1 AB140|CAB140|CELLULOSE SYNTHASE LIKE C8|CHLOROPHYLL A/B PROTEIN 140|CLSC8|F1N18.3|F1N18_3|LHCB1.3|LIGHT-HARVESTING CHLOROPHYLL A/B-PROTEIN 1.3|chlorophyll A/B binding protein 1 chlorophyll A/B binding protein 1 protein-coding common peak1908 1 10512525 10513539 + promoter-TSS (AT1G30010.1) -119 AT1G30010 nMAT1 T1P2.4|T1P2_4|nuclear maturase 1 Intron maturase, type II family protein protein-coding common peak1913 1 10541563 10544867 + exon (AT1G30050.1, exon 1 of 2) 193 AT1G30050 AT1G30050 T1P2.7|T1P2_7 tropomyosin protein-coding common peak1942 1 10719011 10719601 + TTS (AT1G30360.1) 1537 AT1G30370 DLAH DAD1-like acylhydrolase|T4K22.3|T4K22_3 alpha/beta-Hydrolases superfamily protein protein-coding common peak1950 1 10771287 10771780 + TTS (AT1G30455.1) 1811 AT1G30455 AT1G30455 - cyclin/Brf1-like TBP-binding domain-containing protein protein-coding common peak1969 1 10880737 10881801 + promoter-TSS (AT1G30680.1) -210 AT1G30680 AT1G30680 ATH|Arabidopsis TWINKLE homolog toprim domain-containing protein protein-coding common peak1972 1 10894993 10896507 + exon (AT1G30710.1, exon 1 of 1) 498 AT1G30710 AT1G30710 T5I8.16|T5I8_16 FAD-binding Berberine family protein protein-coding VNsp peak1996 1 11004852 11005571 + exon (AT1G30920.1, exon 1 of 1) 233 AT1G30920 AT1G30920 F17F8.21 F-box family protein protein-coding common peak2004 1 11043023 11043849 + exon (AT1G30970.2, exon 1 of 7) 293 AT1G30970 SUF4 F17F8.14|suppressor of FRIGIDA4 zinc finger (C2H2 type) family protein protein-coding common peak2016 1 11129103 11129439 + exon (AT1G31163.1, exon 3 of 4) 968 AT1G31163 AT1G31163 - F-box associated ubiquitination effector family protein protein-coding common peak2021 1 11156498 11156952 + promoter-TSS (AT1G31220.1) 27 AT1G31220 AT1G31220 F28K20.18|F28K20_18 Formyl transferase protein-coding common peak2032 1 11248540 11249913 + promoter-TSS (AT1G31420.1) 361 AT1G31410 AT1G31410 ENF2|ENLARGED FIL EXPRESSION DOMAIN 2|T8E3.6|T8E3_6 putrescine-binding periplasmic protein-like protein protein-coding common peak2033 1 11259721 11260304 + exon (AT1G31450.1, exon 1 of 1) -1198 AT1G31440 AT1G31440 T8E3.10|T8E3_10 SH3 domain-containing protein protein-coding common peak2036 1 11276446 11277668 + promoter-TSS (AT1G31500.5) -360 AT1G31510 AT1G31510 F27M3.26|F27M3_26 F-box associated ubiquitination effector family protein protein-coding common peak2039 1 11316309 11317278 + promoter-TSS (AT1G31600.1) -148 AT1G31620 AT1G31620 F27M3.18|F27M3_18 hypothetical protein protein-coding common peak2063 1 11436430 11437869 + promoter-TSS (AT1G31860.3) 416 AT1G31870 AT1G31870 F5M6.12|F5M6_12 pre-mRNA-splicing factor of RES complex protein protein-coding common peak2085 1 11552473 11553952 + exon (AT1G32120.1, exon 1 of 2) 786 AT1G32120 AT1G32120 F3C3.9|F3C3_9 serine/threonine-protein phosphatase 7 long form-like protein protein-coding common peak2090 1 11585337 11586644 + TTS (AT1G32180.1) 3661 AT1G32180 CSLD6 ATCSLD6|CELLULOSE SYNTHASE LIKE D6|F3C3.4|F3C3_4|cellulose synthase-like D6 cellulose synthase-like D6 protein-coding common peak2104 1 11652958 11653743 + promoter-TSS (AT1G32310.1) -150 AT1G32310 SAMBA F27G20.14 valine-tRNA ligase protein-coding common peak2115 1 11716681 11717950 + intron (AT1G32450.1, intron 2 of 5) 2673 AT1G32450 NRT1.5 AtNPF7.3|F5D14.23|F5D14_23|NPF7.3|NRT1/ PTR family 7.3|nitrate transporter 1.5 nitrate transporter 1.5 protein-coding common peak2120 1 11749254 11752137 + promoter-TSS (AT1G32490.2) -907 AT1G32490 ESP3 EMB2733|EMBRYO DEFECTIVE 2733|ENHANCED SILENCING PHENOTYPE 3|F5D14.27|F5D14_27 RNA helicase family protein protein-coding common peak2128 1 11800097 11801315 + exon (AT1G32640.1, exon 1 of 1) 701 AT1G32640 MYC2 ATMYC2|F6N18.4|F6N18_4|JAI1|JASMONATE INSENSITIVE 1|JIN1|RD22BP1|ZBF1 Basic helix-loop-helix (bHLH) DNA-binding family protein protein-coding common peak2137 1 11845244 11846915 + TTS (AT1G32740.2) 1091 AT1G32740 AT1G32740 F6N18.12|F6N18_12 SBP (S-ribonuclease binding protein) family protein protein-coding common peak2147 1 11917701 11918675 + Intergenic -3453 AT1G32880 AT1G32880 F9L11.34|F9L11_34 ARM repeat superfamily protein protein-coding common peak2150 1 11930561 11931805 + promoter-TSS (AT1G32928.1) 34 AT1G32928 AT1G32928 - Avr9/Cf-9 rapidly elicited protein protein-coding common peak2164 1 12044602 12046975 + promoter-TSS (AT1G33230.1) -591 AT1G33230 AT1G33230 T9L6.9|T9L6_9 TMPIT-like protein protein-coding common peak2166 1 12058558 12060297 + exon (AT1G33250.1, exon 1 of 3) 365 AT1G33250 AT1G33250 T16O9.11|T16O9_11 beta-1,3-n-acetylglucosaminyltransferase radical fringe protein, putative (DUF604) protein-coding common peak2171 1 12084592 12085709 + exon (AT1G33330.1, exon 1 of 7) 199 AT1G33330 AT1G33330 F10C21.2 Class I peptide chain release factor protein-coding common peak2187 1 12207179 12208385 + TTS (AT1G33700.2) 3837 AT1G33680 AT1G33680 F14M2.18|F14M2_18 KH domain-containing protein protein-coding common peak2188 1 12209083 12209314 + TTS (AT1G33680.1) 4885 AT1G33700 AT1G33700 F14M2.16|F14M2_16 Beta-glucosidase, GBA2 type family protein protein-coding common peak2191 1 12228028 12229087 + TTS (AT1G33730.2) 1293 AT1G33730 CYP76C5 ''cytochrome P450|F14M2.14|F14M2_14|cytochrome P450|family 76|polypeptide 5|polypeptide 5''|subfamily C cytochrome P450, family 76, subfamily C, polypeptide 5 protein-coding common peak2196 1 12241667 12242456 + exon (AT1G33770.1, exon 1 of 7) 447 AT1G33770 AT1G33770 F14M2.11|F14M2_11 Protein kinase superfamily protein protein-coding VNsp peak2197 1 12244205 12245280 + exon (AT1G33770.1, exon 7 of 7) 1489 AT1G33780 AT1G33780 F14M2.10|F14M2_10 electron transporter, putative (DUF179) protein-coding common peak2198 1 12245513 12246614 + TTS (AT1G33770.1) 168 AT1G33780 AT1G33780 F14M2.10|F14M2_10 electron transporter, putative (DUF179) protein-coding common peak2201 1 12269652 12270449 + TTS (AT1G33811.1) 2242 AT1G33811 AT1G33811 - GDSL-like Lipase/Acylhydrolase superfamily protein protein-coding VNsp peak2202 1 12290426 12290761 + Intergenic -2383 AT1G33850 AT1G33850 T3M13.13 Ribosomal protein S19 family protein protein-coding VNsp peak2214 1 12400841 12401875 + promoter-TSS (AT1G34065.2) -322 AT1G34065 SAMC2 S-adenosylmethionine carrier 2 S-adenosylmethionine carrier 2 protein-coding VNsp peak2218 1 12426619 12427128 + promoter-TSS (AT1G34120.3) 95 AT1G34120 IP5PI AT5P1|AT5PTASE1|ATIP5PI|F12G12.6|F12G12_6|INOSITOL POLYPHOSPHATE 5-PHOSPHATASE AT5P1|INOSITOL POLYPHOSPHATE 5-PHOSPHATASE I|MYO-INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 1|inositol polyphosphate 5-phosphatase I inositol polyphosphate 5-phosphatase I protein-coding common peak2234 1 12530253 12531196 + promoter-TSS (AT1G34340.1) -91 AT1G34340 AT1G34340 F7P12.5 alpha/beta-Hydrolases superfamily protein protein-coding common peak2238 1 12556239 12556484 + intron (AT1G34390.1, intron 2 of 13) 356 AT1G34390 ARF22 F7P12.6|F7P12_6|auxin response factor 22 auxin response factor 22 protein-coding VNsp peak2241 1 12592741 12593701 + exon (AT1G34440.1, exon 1 of 5) 358 AT1G34440 AT1G34440 F12K21.23|F12K21_23 transmembrane protein protein-coding VNsp peak2242 1 12603992 12604550 + exon (AT1G34470.1, exon 1 of 9) 110 AT1G34470 AT1G34470 F12K21.21|F12K21_21 magnesium transporter, putative (DUF803) protein-coding common peak2250 1 12623879 12624466 + exon (AT1G34520.1, exon 1 of 1) 738 AT1G34520 AT1G34520 F12K21.17|F12K21_17 MBOAT (membrane bound O-acyl transferase) family protein protein-coding common peak2251 1 12638681 12638959 + TTS (AT1G34540.1) 1766 AT1G34540 CYP94D1 ''cytochrome P450|F12K21.15|F12K21_15|cytochrome P450|family 94|polypeptide 1|polypeptide 1''|subfamily D cytochrome P450, family 94, subfamily D, polypeptide 1 protein-coding common peak2253 1 12650647 12651563 + exon (AT1G34550.2, exon 1 of 7) 191 AT1G34550 EMB2756 EMBRYO DEFECTIVE 2756|F12K21.12|F12K21_12 transmembrane protein (DUF616) protein-coding common peak2256 1 12684919 12687924 + TTS (AT1G06787.1) 597 AT1G34630 AT1G34630 F12K21.3 transmembrane protein protein-coding common peak2257 1 12735795 12738994 + exon (AT1G34750.4, exon 3 of 5) 802 AT1G34750 AT1G34750 F11O6.14 Protein phosphatase 2C family protein protein-coding common peak2258 1 12739816 12740119 + Intergenic -1771 AT1G34750 AT1G34750 F11O6.14 Protein phosphatase 2C family protein protein-coding VNsp peak2261 1 12749490 12751058 + promoter-TSS (AT1G34844.2) 109 AT1G34780 APRL4 APR-like 4|ATAPRL4|F11O6.7|F11O6_7 APR-like 4 protein-coding common peak2262 1 12751232 12752100 + intron (AT1G34844.1, intron 1 of 2) 495 AT1G34844 AT1G34844 - ncRNA ncRNA common peak2263 1 12809228 12809523 + exon (AT1G35030.1, exon 4 of 4) 1129 AT1G35030 AT1G35030 F11O6.5|F11O6_5 hypothetical protein protein-coding VNsp peak2264 1 12823813 12824411 + Intergenic 11955 AT1G35040 AT1G35040 F11O6.10|F11O6_10 hypothetical protein protein-coding VNsp peak2267 1 12861815 12862527 + Intergenic 4067 AT1G35150 AT1G35150 T32G9.31|T32G9_31 General transcription factor 2-related zinc finger protein protein-coding VNsp peak2268 1 12866965 12869793 + exon (AT1G35160.2, exon 4 of 4) 1253 AT1G35160 GF14 PHI 14-3-3 PROTEIN G-BOX FACTOR14 PHI|14-3-3PHI|GENERAL REGULATORY FACTOR 4|GF14 protein phi chain|GRF4|T32G9.30|T32G9_30 GF14 protein phi chain protein-coding common peak2271 1 12896214 12896503 + TTS (AT1G35210.1) 1317 AT1G35210 AT1G35210 T32G9.25|T32G9_25 hypothetical protein protein-coding VNsp peak2275 1 12967843 12968063 + Intergenic 2967 AT1G35330 AT1G35330 T9I1.10|T9I1_10 RING/U-box superfamily protein protein-coding common peak2276 1 12977469 12978135 + promoter-TSS (AT1G35340.6) 92 AT1G35340 AT1G35340 T9I1.11|T9I1_11 ATP-dependent protease La (LON) domain protein protein-coding common peak2277 1 12979704 12980509 + TTS (AT1G35340.6) 2396 AT1G35340 AT1G35340 T9I1.11|T9I1_11 ATP-dependent protease La (LON) domain protein protein-coding VNsp peak2282 1 13012798 13013062 + Intergenic -5359 AT1G35400 AT1G35400 F12A4.7|F12A4_7 hypothetical protein (DUF1184) protein-coding VNsp peak2285 1 13029607 13029988 + TTS (AT1G35430.1) 1578 AT1G35430 AT1G35430 F12A4.3|F12A4_3 transmembrane protein protein-coding VNsp peak2290 1 13047309 13048785 + Intergenic -1067 AT1G35467 RALFL5 RALF-like 5 RALF-like 5 protein-coding common peak2298 1 13106660 13106910 + TTS (AT1G06907.1) -1189 AT1G35537 AT1G35537 - Defensin-like (DEFL) family protein protein-coding VNsp peak2300 1 13108752 13109133 + promoter-TSS (AT1G06907.1) 308 AT1G35540 ARF14 F15O4.64|F15O4_64|auxin response factor 14 auxin response factor 14 protein-coding VNsp peak2305 1 13192362 13192849 + promoter-TSS (AT1G35660.1) -3 AT1G35660 AT1G35660 F15O4.11 erythroid differentiation factor-like protein protein-coding VNsp peak2308 1 13223419 13225252 + promoter-TSS (AT1G35720.1) -833 AT1G35720 ANNAT1 ANN1|ANNEXIN|ANNEXIN A1|ATOXY5|AtANN1|F14D7.2|F14D7_2|OXY5|annexin 1 annexin 1 protein-coding common peak2309 1 13229609 13230694 + promoter-TSS (AT1G35730.1) -220 AT1G35730 PUM9 APUM9|F14D7.3|F14D7_3|pumilio 9 pumilio 9 protein-coding VNsp peak2310 1 13235968 13236186 + Intergenic -6146 AT1G35730 PUM9 APUM9|F14D7.3|F14D7_3|pumilio 9 pumilio 9 protein-coding VNsp peak2311 1 13255660 13256228 + promoter-TSS (AT1G35750.1) -374 AT1G35750 PUM10 APUM10|F14D7.5|F14D7_5|pumilio 10 pumilio 10 protein-coding common peak2312 1 13278876 13280645 + promoter-TSS (AT1G35780.4) -78 AT1G35780 AT1G35780 F14D7.8|F14D7_8 N-lysine methyltransferase protein-coding common peak2316 1 13357172 13357662 + Intergenic -3192 AT1G35895 AT1G35895 - transmembrane protein protein-coding VNsp peak2318 1 13400064 13400479 + Intergenic -22283 AT1G36000 LBD5 LOB domain-containing protein 5|T22A15.8|T22A15_8 LOB domain-containing protein 5 protein-coding VNsp peak2319 1 13423122 13423674 + TTS (AT1G36000.1) 844 AT1G36000 LBD5 LOB domain-containing protein 5|T22A15.8|T22A15_8 LOB domain-containing protein 5 protein-coding VNsp peak2326 1 13532372 13532630 + promoter-TSS (AT1G36160.2) -667 AT1G36160 ACC1 AT-ACC1|EMB22|EMBRYO DEFECTIVE 22|GK|GLOSSYHEAD 1|GSD1|GURKE|PAS3|PASTICCINO 3|SENSITIVE TO FREEZING 3|SFR3|acetyl-CoA carboxylase 1 acetyl-CoA carboxylase 1 protein-coding VNsp peak2327 1 13559357 13559886 + Intergenic 13649 AT1G36180 ACC2 F15C21.2|F15C21_2|acetyl-CoA carboxylase 2 acetyl-CoA carboxylase 2 protein-coding common peak2328 1 13581144 13581363 + Intergenic 32798 AT1G36230 AT1G36230 F15C21.12|F15C21_12 hypothetical protein protein-coding VNsp peak2329 1 13581609 13582127 + Intergenic 32183 AT1G36230 AT1G36230 F15C21.12|F15C21_12 hypothetical protein protein-coding VNsp peak2330 1 13590625 13592704 + Intergenic 22387 AT1G36230 AT1G36230 F15C21.12|F15C21_12 hypothetical protein protein-coding common peak2332 1 13616538 13617073 + TTS (AT1G36240.1) 1915 AT1G36240 AT1G36240 F15C21.6|F15C21_6 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein protein-coding VNsp peak2333 1 13623605 13623812 + Intergenic 8818 AT1G36240 AT1G36240 F15C21.6|F15C21_6 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein protein-coding VNsp peak2337 1 13669335 13669995 + exon (AT1G36310.2, exon 1 of 2) 236 AT1G36310 AT1G36310 F7F23.3|F7F23_3 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein protein-coding common peak2338 1 13670176 13670787 + exon (AT1G36310.2, exon 1 of 2) 1052 AT1G36310 AT1G36310 F7F23.3|F7F23_3 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein protein-coding common peak2339 1 13671247 13671966 + promoter-TSS (AT1G36320.1) -168 AT1G36320 AT1G36320 F7F23.4|F7F23_4 hypothetical protein protein-coding common peak2340 1 13674113 13674477 + TTS (AT1G36320.1) 2521 AT1G36320 AT1G36320 F7F23.4|F7F23_4 hypothetical protein protein-coding VNsp peak2343 1 13703807 13704126 + promoter-TSS (AT1G36390.2) -393 AT1G36390 AT1G36390 F7F23.11|F7F23_11 Co-chaperone GrpE family protein protein-coding common peak2344 1 13721682 13721987 + Intergenic -18261 AT1G36390 AT1G36390 F7F23.11|F7F23_11 Co-chaperone GrpE family protein protein-coding VNsp peak2345 1 13727894 13728313 + Intergenic -24530 AT1G36390 AT1G36390 F7F23.11|F7F23_11 Co-chaperone GrpE family protein protein-coding VNsp peak2346 1 13749027 13749279 + Intergenic -12773 AT1G36510 AT1G36510 F28J9.5|F28J9_5 Nucleic acid-binding proteins superfamily protein-coding VNsp peak2347 1 13767804 13768301 + Intergenic 6126 AT1G36510 AT1G36510 F28J9.5|F28J9_5 Nucleic acid-binding proteins superfamily protein-coding VNsp peak2348 1 13786137 13786346 + Intergenic 24315 AT1G36510 AT1G36510 F28J9.5|F28J9_5 Nucleic acid-binding proteins superfamily protein-coding VNsp peak2349 1 13813566 13813879 + Intergenic 4834 AT1G36580 AT1G36580 F28J9.2|F28J9_2 hypothetical protein protein-coding VNsp peak2350 1 13831525 13832125 + Intergenic -4007 AT1G36623 AT1G36623 - hypothetical protein protein-coding VNsp peak2352 1 13848080 13848688 + TTS (AT1G36627.1) 707 AT1G36627 AT1G36627 - Serine/Threonine-kinase protein-coding VNsp peak2353 1 13850724 13852416 + Intergenic 2117 AT1G36640 AT1G36640 T15P17.13|T15P17_13 transmembrane protein protein-coding VNsp peak2356 1 13895282 13895909 + Intergenic 5236 AT1G36730 AT1G36730 T15P17.7|T15P17_7 Translation initiation factor IF2/IF5 protein-coding VNsp peak2357 1 13900281 13901034 + exon (AT1G36730.1, exon 1 of 2) 174 AT1G36730 AT1G36730 T15P17.7|T15P17_7 Translation initiation factor IF2/IF5 protein-coding common peak2358 1 13908744 13908938 + Intergenic -2296 AT1G36745 AT1G36745 - hypothetical protein protein-coding VNsp peak2363 1 14029666 14030835 + exon (AT1G36990.1, exon 1 of 5) 250 AT1G36990 AT1G36990 T32E20.28|T32E20_28 C-jun-amino-terminal kinase-interacting protein protein-coding common peak2364 1 14047593 14047789 + intron (AT1G37020.1, intron 4 of 7) 956 AT1G37020 AT1G37020 T32E20.20|T32E20_20 Cysteine proteinases superfamily protein protein-coding VNsp peak2365 1 14051781 14052152 + Intergenic 5231 AT1G37020 AT1G37020 T32E20.20|T32E20_20 Cysteine proteinases superfamily protein protein-coding VNsp peak2366 1 14057675 14057951 + Intergenic 11078 AT1G37020 AT1G37020 T32E20.20|T32E20_20 Cysteine proteinases superfamily protein protein-coding VNsp peak2367 1 14075995 14077888 + Intergenic 30206 AT1G37020 AT1G37020 T32E20.20|T32E20_20 Cysteine proteinases superfamily protein protein-coding VNsp peak2373 1 14134804 14135467 + Intergenic -1278 AT1G37113 AT1G37113 - hypothetical protein protein-coding VNsp peak2374 1 14139205 14139739 + TTS (AT1G37113.1) 3059 AT1G37113 AT1G37113 - hypothetical protein protein-coding VNsp peak2379 1 14185407 14186102 + Intergenic -7720 AT1G37150 HCS2 F28L22.1|F28L22_1|holocarboxylase synthetase 2 holocarboxylase synthetase 2 protein-coding VNsp peak2383 1 14332059 14333197 + Intergenic -36375 AT1G38131 AT1G38131 - O-fucosyltransferase family protein protein-coding VNsp peak2384 1 14335816 14336116 + Intergenic -39713 AT1G38131 AT1G38131 - O-fucosyltransferase family protein protein-coding VNsp peak2385 1 14917674 14918497 + Intergenic 4970 AT1G40083 AT1G40083 - hypothetical protein protein-coding VNsp peak2386 1 14920713 14921302 + Intergenic 2048 AT1G40083 AT1G40083 - hypothetical protein protein-coding VNsp peak2387 1 15081972 15085389 + exon (AT1G40104.1, exon 11 of 22) 1728 AT1G40104 AT1G40104 - hypothetical protein protein-coding common peak2388 1 15085662 15085978 + TTS (AT1G40104.1) 3868 AT1G40104 AT1G40104 - hypothetical protein protein-coding common peak2389 1 15138678 15139726 + Intergenic 57250 AT1G40104 AT1G40104 - hypothetical protein protein-coding VNsp peak2390 1 15455084 15455483 + Intergenic -20609 AT1G40390 AT1G40390 F9D18.22|F9D18_22 DNAse I-like superfamily protein protein-coding common peak2391 1 15509063 15509701 + Intergenic -74708 AT1G40390 AT1G40390 F9D18.22|F9D18_22 DNAse I-like superfamily protein protein-coding VNsp peak2393 1 15562209 15562682 + Intergenic 22698 AT1G41820 AT1G41820 T4I21.4|T4I21_4 hypothetical protein protein-coding common peak2395 1 15603908 15604105 + exon (AT1G41830.1, exon 8 of 8) 3960 AT1G41830 SKS6 F5A13.5|F5A13_5|SKU5 SIMILAR 6|SKU5-similar 6 SKU5-similar 6 protein-coding common peak2398 1 15613769 15614458 + Intergenic -6147 AT1G41830 SKS6 F5A13.5|F5A13_5|SKU5 SIMILAR 6|SKU5-similar 6 SKU5-similar 6 protein-coding VNsp peak2400 1 15624132 15625073 + Intergenic -16636 AT1G41830 SKS6 F5A13.5|F5A13_5|SKU5 SIMILAR 6|SKU5-similar 6 SKU5-similar 6 protein-coding VNsp peak2401 1 15645959 15646967 + Intergenic 6079 AT1G41880 AT1G41880 F5A13.4|F5A13_4 Ribosomal protein L35Ae family protein protein-coding VNsp peak2404 1 15656608 15657098 + Intergenic -4311 AT1G41880 AT1G41880 F5A13.4|F5A13_4 Ribosomal protein L35Ae family protein protein-coding VNsp peak2405 1 15684651 15685227 + promoter-TSS (AT1G41920.1) -452 AT1G41920 AT1G41920 F5A13.9|F5A13_9 General transcription factor 2-related zinc finger protein protein-coding VNsp peak2406 1 15688964 15689430 + Intergenic -4710 AT1G41920 AT1G41920 F5A13.9|F5A13_9 General transcription factor 2-related zinc finger protein protein-coding VNsp peak2407 1 15720852 15721832 + Intergenic -4173 AT1G42080 AT1G42080 F19C17.17|F19C17_17 hypothetical protein protein-coding VNsp peak2408 1 15724596 15725004 + Intergenic 5886 AT1G42120 AT1G42120 68114.TRNA-MET-1 tRNA tRNA VNsp peak2409 1 15729157 15731099 + TTS (AT1G42120.1) 558 AT1G42120 AT1G42120 68114.TRNA-MET-1 tRNA tRNA VNsp peak2410 1 15750668 15751424 + Intergenic -10036 AT1G42190 AT1G42190 F19C17.40|F19C17_40 GAG/POL/ENV polyprotein protein-coding VNsp peak2411 1 15754221 15755276 + Intergenic -6334 AT1G42190 AT1G42190 F19C17.40|F19C17_40 GAG/POL/ENV polyprotein protein-coding VNsp peak2412 1 15807256 15807465 + Intergenic 46278 AT1G42190 AT1G42190 F19C17.40|F19C17_40 GAG/POL/ENV polyprotein protein-coding VNsp peak2413 1 15809738 15810032 + Intergenic 48803 AT1G42190 AT1G42190 F19C17.40|F19C17_40 GAG/POL/ENV polyprotein protein-coding common peak2414 1 15811017 15811358 + Intergenic 50105 AT1G42190 AT1G42190 F19C17.40|F19C17_40 GAG/POL/ENV polyprotein protein-coding VNsp peak2419 1 15887972 15888658 + Intergenic -2966 AT1G42430 AT1G42430 F7F22.5|F7F22_5 inactive purple acid phosphatase-like protein protein-coding VNsp peak2420 1 15889449 15889647 + Intergenic -1733 AT1G42430 AT1G42430 F7F22.5|F7F22_5 inactive purple acid phosphatase-like protein protein-coding VNsp peak2422 1 15894692 15895377 + TTS (AT1G42430.1) 3663 AT1G42430 AT1G42430 F7F22.5|F7F22_5 inactive purple acid phosphatase-like protein protein-coding VNsp peak2424 1 15899835 15900722 + promoter-TSS (AT1G42440.1) -173 AT1G42440 AT1G42440 F7F22.4|F7F22_4 pre-rRNA-processing TSR1-like protein protein-coding common peak2425 1 15910730 15911247 + Intergenic -10883 AT1G42440 AT1G42440 F7F22.4|F7F22_4 pre-rRNA-processing TSR1-like protein protein-coding VNsp peak2427 1 15935725 15936465 + promoter-TSS (AT1G42480.2) -61 AT1G42480 AT1G42480 T8D8.4|T8D8_4 TLR4 regulator/MIR-interacting MSAP protein protein-coding common peak2428 1 15970888 15972085 + Intergenic -1568 AT1G42540 GLR3.3 ATGLR3.3|T8D8.1|T8D8_1|glutamate receptor 3.3 glutamate receptor 3.3 protein-coding VNsp peak2429 1 15976957 15978262 + TTS (AT1G42540.3) 804 AT1G42550 PMI1 PLASTID MOVEMENT IMPAIRED1|T8D8.2|T8D8_2 plastid movement impaired1 protein-coding common peak2431 1 15994298 15994938 + Intergenic -11047 AT1G42560 MLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9|ATMLO9|MILDEW RESISTANCE LOCUS O 9|T8D8.5|T8D8_5 Seven transmembrane MLO family protein protein-coding VNsp peak2432 1 16003738 16004058 + Intergenic -20327 AT1G42560 MLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9|ATMLO9|MILDEW RESISTANCE LOCUS O 9|T8D8.5|T8D8_5 Seven transmembrane MLO family protein protein-coding VNsp peak2433 1 16004472 16005096 + Intergenic -21213 AT1G42560 MLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9|ATMLO9|MILDEW RESISTANCE LOCUS O 9|T8D8.5|T8D8_5 Seven transmembrane MLO family protein protein-coding VNsp peak2434 1 16008705 16009373 + Intergenic -25468 AT1G42560 MLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9|ATMLO9|MILDEW RESISTANCE LOCUS O 9|T8D8.5|T8D8_5 Seven transmembrane MLO family protein protein-coding VNsp peak2435 1 16021842 16022859 + Intergenic -15256 AT1G42615 AT1G42615 - TATA box-binding protein associated factor RNA polymerase I subunit B protein-coding VNsp peak2436 1 16024507 16025058 + Intergenic -12824 AT1G42615 AT1G42615 - TATA box-binding protein associated factor RNA polymerase I subunit B protein-coding VNsp peak2437 1 16074132 16074487 + Intergenic 4258 AT1G42710 AT1G42710 F8D11.16 General transcription factor 2-related zinc finger protein protein-coding VNsp peak2441 1 16125120 16125581 + promoter-TSS (AT1G42960.1) -393 AT1G42960 AT1G42960 F13A11.2|F13A11_2 inner membrane localized protein protein-coding VNsp peak2445 1 16232422 16233113 + promoter-TSS (AT1G43140.1) -18 AT1G43140 AT1G43140 F1I21.19|F1I21_19 Cullin family protein protein-coding common peak2446 1 16238103 16238352 + promoter-TSS (AT1G43145.1) -298 AT1G43145 AT1G43145 - hypothetical protein protein-coding VNsp peak2447 1 16244533 16245684 + Intergenic 6583 AT1G43145 AT1G43145 - hypothetical protein protein-coding VNsp peak2448 1 16252443 16252758 + Intergenic -11205 AT1G43160 RAP2.6 F1I21.18|F1I21_18|related to AP2 6 related to AP2 6 protein-coding VNsp peak2450 1 16267921 16268584 + promoter-TSS (AT1G43171.1) -823 AT1G43171 AT1G43171 - B3 domain protein protein-coding common peak2452 1 16310151 16311328 + exon (AT1G43245.2, exon 1 of 4) 261 AT1G43245 AT1G43245 - SET domain-containing protein protein-coding common peak2453 1 16321953 16322159 + Intergenic 3803 AT1G43260 AT1G43260 F1I21.5|F1I21_5 hAT transposon superfamily protein protein-coding VNsp peak2454 1 16341940 16342521 + Intergenic 4245 AT1G43310 AT1G43310 F1I21.17|F1I21_17 Nucleotide-sugar transporter family protein protein-coding VNsp peak2455 1 16367627 16368015 + Intergenic 8792 AT1G43330 AT1G43330 T10P12.11|T10P12_11 Homeodomain-like superfamily protein protein-coding VNsp peak2456 1 16395810 16396883 + Intergenic 3534 AT1G43560 ty2 AT1G43565|Aty2|T10P12.4|T10P12_4|thioredoxin Y2 thioredoxin Y2 protein-coding VNsp peak2460 1 16429320 16430559 + exon (AT1G43620.5, exon 1 of 15) 287 AT1G43620 UGT80B1 T10P12.7|T10P12_7|TRANSPARENT TESTA 15|TT15 UDP-Glycosyltransferase superfamily protein protein-coding common peak2462 1 16436893 16437824 + exon (AT1G43630.1, exon 1 of 1) 397 AT1G43630 AT1G43630 T10P12.8|T10P12_8 plant/protein (DUF793) protein-coding common peak2467 1 16467545 16468682 + exon (AT1G43670.1, exon 1 of 12) 815 AT1G43670 FBP 6-bisphosphatase|Arabidopsis thaliana cytosolic fructose-1|AtcFBP|F2J6.2|F2J6_2|FINS1|FRUCTOSE INSENSITIVE 1|fructose-1 Inositol monophosphatase family protein protein-coding common peak2469 1 16478150 16478900 + exon (AT1G43690.1, exon 1 of 7) 366 AT1G43690 AT1G43690 F2J6.5|F2J6_5 ubiquitin interaction motif-containing protein protein-coding common peak2470 1 16482266 16482688 + exon (AT1G43690.1, exon 7 of 7) -1754 AT1G43700 VIP1 AtVIP1|F2J6.6|F2J6_6|SUE3|VIRE2-INTERACTING PROTEIN|VIRE2-interacting protein 1|sulphate utilization efficiency 3 VIRE2-interacting protein 1 protein-coding common peak2473 1 16508440 16508875 + TTS (AT1G43730.1) 1127 AT1G43730 AT1G43730 F2J6.21|F2J6_21 RNA-directed DNA polymerase (reverse transcriptase)-related family protein protein-coding VNsp peak2474 1 16518273 16519043 + Intergenic -8874 AT1G43730 AT1G43730 F2J6.21|F2J6_21 RNA-directed DNA polymerase (reverse transcriptase)-related family protein protein-coding common peak2475 1 16523533 16524103 + Intergenic 7247 AT1G43760 AT1G43760 F2J6.14 DNAse I-like superfamily protein protein-coding common peak2476 1 16526755 16527242 + Intergenic 4067 AT1G43760 AT1G43760 F2J6.14 DNAse I-like superfamily protein protein-coding common peak2477 1 16533850 16534553 + Intergenic -3136 AT1G43760 AT1G43760 F2J6.14 DNAse I-like superfamily protein protein-coding VNsp peak2478 1 16547978 16548796 + promoter-TSS (AT1G43770.1) -30 AT1G43770 AT1G43770 F28H19.3|F28H19_3 RING/FYVE/PHD zinc finger superfamily protein protein-coding common peak2481 1 16581201 16581853 + promoter-TSS (AT1G43815.2) -557 AT1G43815 AT1G43815 - hypothetical protein protein-coding VNsp peak2482 1 16601146 16601419 + Intergenic 7536 AT1G43825 AT1G43825 - hypothetical protein protein-coding VNsp peak2484 1 16621306 16621780 + TTS (AT1G43860.2) 2951 AT1G43860 AT1G43860 F28H19.11|F28H19_11 sequence-specific DNA binding transcription factor protein-coding common peak2485 1 16624041 16624565 + exon (AT1G43860.2, exon 1 of 4) 191 AT1G43860 AT1G43860 F28H19.11|F28H19_11 sequence-specific DNA binding transcription factor protein-coding common peak2486 1 16625683 16626096 + Intergenic -1385 AT1G43860 AT1G43860 F28H19.11|F28H19_11 sequence-specific DNA binding transcription factor protein-coding VNsp peak2490 1 16646193 16647082 + promoter-TSS (AT1G43890.2) -59 AT1G43890 RAB18 ARABIDOPSIS RAB GTPASE HOMOLOG B18|ARABIDOPSIS RAB GTPASE HOMOLOG C1|ATRAB-C1|ATRAB18|ATRABC1|F28H19.15|F28H19_15|RAB GTPASE HOMOLOG 18-1|RAB GTPASE HOMOLOG B18|RAB GTPASE HOMOLOG C1|RAB18-1|RABC1 RAB GTPASE HOMOLOG B18 protein-coding common peak2491 1 16668618 16668867 + Intergenic 5210 AT1G43950 ARF23 F9C16.11|F9C16_11|auxin response factor 23 auxin response factor 23 protein-coding VNsp peak2492 1 16685903 16686364 + Intergenic 3430 AT1G43980 AT1G43980 F9C16.15|F9C16_15 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding VNsp peak2495 1 16727015 16727572 + promoter-TSS (AT1G44030.2) -541 AT1G44030 AT1G44030 F9C16.25|F9C16_25 Cysteine/Histidine-rich C1 domain family protein protein-coding VNsp peak2496 1 16737806 16738410 + Intergenic -1084 AT1G44050 AT1G44050 F9C16.28|F9C16_28 Cysteine/Histidine-rich C1 domain family protein protein-coding VNsp peak2498 1 16746150 16746431 + Intergenic 7098 AT1G44050 AT1G44050 F9C16.28|F9C16_28 Cysteine/Histidine-rich C1 domain family protein protein-coding VNsp peak2501 1 16774149 16774796 + TTS (AT1G44110.1) 2880 AT1G44110 CYCA1;1 Cyclin A1;1|T7O23.18|T7O23_18 Cyclin A1;1 protein-coding VNsp peak2503 1 16779565 16780084 + promoter-TSS (AT1G44120.2) -235 AT1G44120 AT1G44120 CELLULOSE SYNTHASE INTERACTIVE 2|CSI2|T7O23.25|T7O23_25 CELLULOSE SYNTHASE INTERACTIVE 2 protein-coding VNsp peak2504 1 16785272 16786148 + exon (AT1G44120.2, exon 4 of 7) 1111 AT1G44125 AT1G44125 - ncRNA ncRNA VNsp peak2511 1 16837598 16838673 + exon (AT1G44350.1, exon 1 of 5) 427 AT1G44350 ILL6 IAA-leucine resistant (ILR)-like gene 6|T18F15.9|T18F15_9 IAA-amino acid hydrolase ILR1-like 6 protein-coding common peak2519 1 16939476 16940478 + intron (AT1G44835.2, intron 1 of 11) 176 AT1G44835 AT1G44835 T12C22.11|T12C22_11 YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein protein-coding common peak2520 1 16942106 16942939 + TTS (AT1G44835.1) 2721 AT1G44835 AT1G44835 T12C22.11|T12C22_11 YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein protein-coding common peak2524 1 16974672 16976256 + promoter-TSS (AT1G44910.2) -140 AT1G44910 PRP40A ATPRP40A|F27F5.2|pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A protein-coding common peak2526 1 16996411 16996731 + Intergenic -1276 AT1G44941 AT1G44941 - hypothetical protein protein-coding VNsp peak2536 1 17075756 17077437 + promoter-TSS (AT1G45145.1) -179 AT1G45145 TRX5 ATH5|ATTRX5|F27F5.21|F27F5_21|LIV1|LOCUS OF INSENSITIVITY TO VICTORIN 1|THIOREDOXIN|THIOREDOXIN H-TYPE 5|TRX-h5|thioredoxin H-type 5 thioredoxin H-type 5 protein-coding common peak2538 1 17082798 17083231 + promoter-TSS (AT1G45150.1) -422 AT1G45150 AT1G45150 F27F5.22|F27F5_22 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase protein-coding common peak2542 1 17152764 17153290 + exon (AT1G45233.2, exon 1 of 4) 131 AT1G45233 THO5 AtTHO5 THO complex, subunit 5 protein-coding VNsp peak2548 1 17191318 17191745 + exon (AT1G45688.1, exon 1 of 3) 127 AT1G45688 AT1G45688 F2G19.25|F2G19_25 transmembrane protein protein-coding common peak2549 1 17192592 17193241 + exon (AT1G45688.1, exon 3 of 3) 1512 AT1G45688 AT1G45688 F2G19.25|F2G19_25 transmembrane protein protein-coding common peak2558 1 17247153 17248125 + Intergenic -5313 AT1G46554 AT1G46554 - ncRNA ncRNA common peak2560 1 17274266 17275161 + promoter-TSS (AT1G46984.1) -9 AT1G46984 AT1G46984 F2G19.21|F2G19_21 F-box family protein protein-coding common peak2566 1 17305773 17307024 + promoter-TSS (AT1G47230.1) -176 AT1G47230 CYCA3;4 CYCLIN A3;4|F8G22.5|F8G22_5 CYCLIN A3;4 protein-coding common peak2570 1 17327528 17328494 + promoter-TSS (AT1G47271.1) -802 AT1G47271 AT1G47271 - Cystathionine beta-synthase (CBS) family protein protein-coding VNsp peak2574 1 17340183 17340662 + intron (AT1G47300.1, intron 1 of 3) 550 AT1G47300 AT1G47300 T3F24.8|T3F24_8 F-box family protein protein-coding common peak2575 1 17342591 17343424 + promoter-TSS (AT1G07347.1) 268 AT1G47310 AT1G47310 T3F24.7|T3F24_7 signal peptidase I protein-coding common peak2576 1 17345003 17345268 + TTS (AT1G47310.1) -1959 AT1G47317 AT1G47317 - defensin-like protein protein-coding common peak2590 1 17432196 17433213 + promoter-TSS (AT1G47497.1) 204 AT1G47500 RBP47C' ATRBP47C'|F16N3.23|F16N3_23|RNA-binding protein 47C' RNA-binding protein 47C' protein-coding common peak2604 1 17505766 17506792 + TTS (AT1G47610.1) 1565 AT1G47610 AT1G47610 F16N3.9|F16N3_9 Transducin/WD40 repeat-like superfamily protein protein-coding common peak2605 1 17535984 17536538 + promoter-TSS (AT1G47660.1) -710 AT1G47660 AT1G47660 F16N3.35|F16N3_35 hypothetical protein protein-coding VNsp peak2614 1 17592723 17593425 + Intergenic -1609 AT1G47780 AT1G47780 T2E6.14|T2E6_14 alpha/beta-Hydrolases superfamily protein protein-coding VNsp peak2615 1 17607541 17607833 + TTS (AT1G47813.1) 1129 AT1G47813 AT1G47813 T2E6.9|T2E6_9 hypothetical protein protein-coding VNsp peak2618 1 17633940 17635082 + promoter-TSS (AT1G47870.1) -186 AT1G47870 ATE2F2 ARABIDOPSIS THALIANA HOMOLOG OF E2F C|ATE2FC|E2FC|E2FC TRANSCRIPTION FACTOR|T2E6.2|T2E6_2|TRANSCRIPTION FACTOR-2 E2F2 winged-helix DNA-binding transcription factor family protein protein-coding common peak2620 1 17660347 17661068 + promoter-TSS (AT1G47915.1) -45 AT1G47915 AT1G47915 - F-box family protein protein-coding common peak2622 1 17686867 17687557 + exon (AT1G47970.1, exon 1 of 2) 222 AT1G47970 AT1G47970 T2J15.12|T2J15_12 nucleolin protein-coding common peak2623 1 17690352 17690587 + Intergenic 3418 AT1G47980 AT1G47980 T2J15.11|T2J15_11 desiccation-like protein protein-coding VNsp peak2648 1 17825227 17825627 + promoter-TSS (at1g48267) -258 at1g48267 common peak2657 1 17867830 17868736 + promoter-TSS (AT1G48360.4) -239 AT1G48360 AT1G48360 F11A17.9|F11A17_9 zinc ion binding/nucleic acid binding/hydrolase protein-coding common peak2672 1 17962562 17964420 + intron (AT1G48590.3, intron 1 of 1) 652 AT1G48590 AT1G48590 T1N15.21|T1N15_21 Calcium-dependent lipid-binding (CaLB domain) family protein protein-coding common peak2679 1 18029467 18030036 + promoter-TSS (AT1G48745.1) -953 AT1G48745 AT1G48745 - hypothetical protein protein-coding common peak2685 1 18080485 18081522 + exon (AT1G48880.1, exon 1 of 4) 595 AT1G48880 TBL7 F27K7.9|F27K7_9|TRICHOME BIREFRINGENCE-LIKE 7 TRICHOME BIREFRINGENCE-LIKE 7 protein-coding common peak2686 1 18087451 18088150 + promoter-TSS (AT1G48900.2) 79 AT1G48900 AT1G48900 F27K7.8|F27K7_8 Signal recognition particle, SRP54 subunit protein protein-coding common peak2687 1 18091259 18091878 + promoter-TSS (AT1G48910.1) -113 AT1G48910 YUC10 F27K7.7|F27K7_7|YUCCA 10 Flavin-containing monooxygenase family protein protein-coding common peak2706 1 18210918 18212174 + promoter-TSS (AT1G49225.1) -156 AT1G49225 AT1G49225 - hypothetical protein protein-coding common peak2708 1 18217867 18218770 + promoter-TSS (AT1G49245.1) -23 AT1G49245 AT1G49245 - Prefoldin chaperone subunit family protein protein-coding common peak2710 1 18229695 18230499 + TTS (AT1G49280.1) 233 AT1G49270 PERK7 AtPERK7|F13F21.28|F13F21_28|proline-rich extensin-like receptor kinase 7 Protein kinase superfamily protein protein-coding VNsp peak2714 1 18236811 18237011 + TTS (AT1G49310.1) 1586 AT1G49310 AT1G49310 F13F21.30|F13F21_30 transmembrane protein protein-coding common peak2723 1 18282765 18283207 + promoter-TSS (AT1G49400.1) 18 AT1G49400 emb1129 F13F21.17|F13F21_17|embryo defective 1129 Nucleic acid-binding, OB-fold-like protein protein-coding common peak2725 1 18286653 18288155 + promoter-TSS (AT1G49410.1) -370 AT1G49410 TOM6 translocase of the outer mitochondrial membrane 6 translocase of the outer mitochondrial membrane 6 protein-coding common peak2727 1 18304877 18306733 + exon (AT1G49450.1, exon 1 of 1) 360 AT1G49450 AT1G49450 F13F21.11|F13F21_11 Transducin/WD40 repeat-like superfamily protein protein-coding common peak2746 1 18387413 18388012 + promoter-TSS (AT1G49690.1) -90 AT1G49690 AT1G49690 51780.TRNA-ARG-1 tRNA tRNA common peak2757 1 18437899 18438165 + promoter-TSS (AT1G49790.2) -901 AT1G49790 AT1G49790 F10F5.4|F10F5_4 F-box associated ubiquitination effector family protein protein-coding VNsp peak2771 1 18492984 18493667 + promoter-TSS (AT1G49952.1) -68 AT1G49952 AT1G49952 - ncRNA ncRNA common peak2782 1 18552873 18553216 + promoter-TSS (AT1G50070.1) 45 AT1G50070 AT1G50070 51777.TRNA-LEU-2 tRNA tRNA common peak2790 1 18597704 18599262 + promoter-TSS (AT1G50200.2) -4 AT1G50200 ALATS ACD|ALARS|Alanyl-tRNA synthetase|F14I3.17|F14I3_17 Alanyl-tRNA synthetase protein-coding common peak2795 1 18627396 18629118 + TTS (AT1G50300.1) 195 AT1G50290 AT1G50290 F14I3.24|F14I3_24 hypothetical protein protein-coding common peak2804 1 18671925 18673057 + exon (AT1G50410.2, exon 2 of 11) 355 AT1G50410 AT1G50410 CHR28|F11F12.23|F11F12_23|FRG2|SNF2-RING-HELICASE?LIKE 2|chromatin remodeling 28 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein protein-coding common peak2810 1 18706009 18707369 + promoter-TSS (AT1G50490.1) -32 AT1G50490 UBC20 F11F12.16|ubiquitin-conjugating enzyme 20 ubiquitin-conjugating enzyme 20 protein-coding common peak2817 1 18741539 18744641 + exon (AT1G50610.1, exon 2 of 3) 1063 AT1G50610 PRK5 F11F12.7|F11F12_7|pollen receptor like kinase 5 Leucine-rich repeat protein kinase family protein protein-coding common peak2818 1 18747298 18748664 + promoter-TSS (AT1G50620.1) -260 AT1G50620 AT1G50620 F17J6.14|F17J6_14 RING/FYVE/PHD zinc finger superfamily protein protein-coding common peak2831 1 18817043 18817274 + Intergenic -1849 AT1G50760 AT1G50760 F8A12.1|F8A12_1 Aminotransferase-like, plant mobile domain family protein protein-coding VNsp peak2839 1 18834498 18835366 + promoter-TSS (AT1G50820.1) -71 AT1G50820 AT1G50820 F8A12.6|F8A12_6 aminotransferase-like, mobile domain protein protein-coding common peak2849 1 18905072 18905559 + exon (AT1G50990.1, exon 7 of 7) 2637 AT1G50990 BSK11 F8A12.21|F8A12_21|brassinosteroid-signaling kinase 11 kinase with tetratricopeptide repeat domain-containing protein protein-coding common peak2857 1 18937251 18937460 + promoter-TSS (AT1G51120.1) -736 AT1G51120 AT1G51120 F23H24.5|F23H24_5 AP2/B3 transcription factor family protein protein-coding VNsp peak2867 1 18983894 18984727 + promoter-TSS (AT1G51200.3) 29 AT1G51200 AT1G51200 F11M15.7|F11M15_7 A20/AN1-like zinc finger family protein protein-coding common peak2877 1 19030205 19031356 + promoter-TSS (AT1G51340.4) -218 AT1G51340 AT1G51340 F11M15.20|F11M15_20 MATE efflux family protein protein-coding common peak2879 1 19043713 19045732 + promoter-TSS (AT1G51370.1) -337 AT1G51370 AT1G51370 F11M15.27|F11M15_27 F-box/RNI-like/FBD-like domains-containing protein protein-coding common peak2899 1 19142210 19144669 + exon (AT1G51630.1, exon 3 of 6) 881 AT1G51630 MSR2 AtMSR2|F19C24.14|F19C24_14|Mannan Synthesis Related 2 O-fucosyltransferase family protein protein-coding common peak2904 1 19160842 19161720 + exon (AT1G51680.3, exon 1 of 4) 271 AT1G51680 4CL1 4-COUMARATE:COA LIGASE|4-COUMARATE:COA LIGASE 1|4-coumarate:CoA ligase 1|4CL.1|ARABIDOPSIS THALIANA 4-COUMARATE:COA LIGASE 1|AT4CL1|F19C24.11|F19C24_11 4-coumarate:CoA ligase 1 protein-coding common peak2907 1 19179462 19180367 + promoter-TSS (AT1G51720.2) 281 AT1G51710 UBP6 ATUBP6|F19C24.8|F19C24_8|UBIQUITIN-SPECIFIC PROTEASE 6|ubiquitin-specific protease 6 ubiquitin-specific protease 6 protein-coding common peak2910 1 19203189 19204440 + promoter-TSS (AT1G51780.1) -698 AT1G51780 ILL5 F19C24.29|F19C24_29|IAA-leucine resistant (ILR)-like gene 5 IAA-amino acid hydrolase ILR1-like 5 protein-coding common peak2929 1 19320440 19320879 + Intergenic -5743 AT1G51970 AT1G51970 F5F19.3|F5F19_3 B3 domain protein protein-coding common peak2932 1 19349186 19349783 + promoter-TSS (AT1G52030.2) -396 AT1G52030 MBP2 F-ATMBP|F5F19.9|F5F19_9|MBP1.2|MYROSINASE BINDING PROTEIN|myrosinase-binding protein 2 myrosinase-binding protein 2 protein-coding common peak2941 1 19400156 19400419 + TTS (AT1G52130.2) -2043 AT1G52120 AT1G52120 F5F19.18|F5F19_18 Mannose-binding lectin superfamily protein protein-coding common peak2952 1 19467440 19468547 + exon (AT1G52280.1, exon 7 of 7) 1593 AT1G52280 RABG3d AtRABG3d|F19K6.10|F19K6_10|RAB GTPase homolog G3D RAB GTPase homolog G3D protein-coding common peak2971 1 19587106 19588084 + promoter-TSS (AT1G52570.2) -8 AT1G52580 RBL5 ATRBL5|F6D8.20|F6D8_20|RHOMBOID-like protein 5 RHOMBOID-like protein 5 protein-coding VNsp peak2978 1 19608470 19609322 + promoter-TSS (AT1G52630.1) -248 AT1G52630 AT1G52630 F6D8.15|F6D8_15 O-fucosyltransferase family protein protein-coding common peak2992 1 19705618 19707046 + intron (AT1G52905.1, intron 1 of 1) 285 AT1G52905 AT1G52905 - hypothetical protein protein-coding common peak2997 1 19744067 19744537 + promoter-TSS (AT1G52990.1) -853 AT1G52990 AT1G52990 F8L10.14|F8L10_14 thioredoxin family protein protein-coding common peak3002 1 19774869 19775682 + promoter-TSS (AT1G53060.1) -648 AT1G53060 AT1G53060 F8L10.8|F8L10_8 Legume lectin family protein protein-coding common peak3006 1 19798798 19799404 + promoter-TSS (AT1G53140.1) -87 AT1G53140 DRP5A Dynamin related protein 5A|F8L10.1|F8L10_1 Dynamin related protein 5A protein-coding common peak3015 1 19838338 19838955 + exon (AT1G53190.2, exon 3 of 7) 1376 AT1G53190 AT1G53190 F12M16.10|F12M16_10 RING/U-box superfamily protein protein-coding common peak3030 1 19909419 19910423 + promoter-TSS (AT1G53366.1) 56 AT1G53366 AT1G53366 - hypothetical protein protein-coding common peak3042 1 19986934 19987736 + exon (AT1G53570.5, exon 1 of 11) 144 AT1G53570 MAP3KA F22G10.18|MAP KINASE KINASE KINASE 3|MAPKKK3|MEK KINASE|mitogen-activated protein kinase kinase kinase 3 mitogen-activated protein kinase kinase kinase 3 protein-coding common peak3051 1 20027817 20029079 + TTS (AT1G53650.2) 308 AT1G53645 AT1G53645 - hydroxyproline-rich glycoprotein family protein protein-coding common peak3064 1 20084392 20084612 + promoter-TSS (AT1G53801.1) -329 AT1G53801 AT1G53801 - ncRNA ncRNA VNsp peak3065 1 20084847 20085159 + promoter-TSS (AT1G53801.1) -830 AT1G53801 AT1G53801 - ncRNA ncRNA common peak3066 1 20090839 20091938 + promoter-TSS (AT1G53820.1) -103 AT1G53820 AT1G53820 T18A20.16|T18A20_16 RING/U-box superfamily protein protein-coding common peak3077 1 20186857 20187236 + promoter-TSS (AT1G54080.1) 50 AT1G54080 UBP1A F15I1.16|F15I1_16|oligouridylate-binding protein 1A oligouridylate-binding protein 1A protein-coding common peak3080 1 20203811 20204569 + exon (AT1G54115.1, exon 1 of 1) 2384 AT1G54115 CCX4 ATCCX4|CATION CALCIUM EXCHANGER 4|cation calcium exchanger 4 cation calcium exchanger 4 protein-coding common peak3087 1 20242236 20244435 + TTS (AT1G54210.1) 457 AT1G54215 AT1G54215 - proline-rich family protein protein-coding common peak3094 1 20270021 20270785 + promoter-TSS (AT1G54300.1) -263 AT1G54290 AT1G54290 F20D21.11|F20D21_11 Translation initiation factor SUI1 family protein protein-coding common peak3100 1 20300311 20301254 + TTS (AT1G54385.2) 197 AT1G54380 AT1G54380 F20D21.20|F20D21_20 spliceosome protein-like protein protein-coding common peak3103 1 20311610 20312053 + promoter-TSS (AT1G54410.1) 212 AT1G54420 AT1G54420 F20D21.41|F20D21_41 hypothetical protein protein-coding VNsp peak3105 1 20335582 20336716 + TTS (AT1G54450.1) 3620 AT1G54450 AT1G54450 F20D21.27|F20D21_27 Calcium-binding EF-hand family protein protein-coding common peak3123 1 20431947 20433003 + TTS (AT1G54740.1) -1437 AT1G54760 AGL85 AGAMOUS-like 85|T22H22.17|T22H22_17 AGAMOUS-like 85 protein-coding common peak3126 1 20450604 20452670 + promoter-TSS (AT1G54830.2) 28 AT1G54830 NF-YC3 ''nuclear factor Y|F14C21.41|F14C21_41|nuclear factor Y|subunit C3|subunit C3'' nuclear factor Y, subunit C3 protein-coding common peak3130 1 20470479 20471440 + exon (AT1G54920.4, exon 1 of 8) 206 AT1G54920 AT1G54920 F14C21.46|F14C21_46 hypothetical protein protein-coding common peak3143 1 20553703 20554717 + promoter-TSS (AT1G55090.1) 44 AT1G55080 MED9 T7N22.3|T7N22_3 mediator of RNA polymerase II transcription subunit-like protein protein-coding common peak3166 1 20715248 20715707 + TTS (AT1G55490.3) 1978 AT1G55480 ZKT T5A14.12|T5A14_12|a K-box domain|and a TPR region|protein containing PDZ domain protein containing PDZ domain, a K-box domain, and a TPR region protein-coding VNsp peak3173 1 20752598 20753024 + exon (AT1G55550.1, exon 11 of 11) 3845 AT1G55560 sks14 SKU5 similar 14|SKU5 similar 14|T5A14.2|T5A14_2 SKU5 similar 14 protein-coding common peak3181 1 20790169 20791944 + promoter-TSS (ENSRNA049492487-T1) 138 AT1G55620 CLC-F ATCLC-F|CHLORIDE CHANNEL F|CLCF|F20N2.5|chloride channel F chloride channel F protein-coding common peak3194 1 20859220 20860105 + promoter-TSS (AT1G55810.3) -179 AT1G55805 AT1G55805 BolA1|homolog of E.coli BolA 1 BolA-like family protein protein-coding common peak3206 1 20916977 20917842 + exon (AT1G55928.1, exon 1 of 1) 219 AT1G55928 AT1G55928 - nuclear speckle splicing regulatory-like protein (DUF2040) protein-coding common peak3220 1 20978870 20979662 + exon (AT1G56090.2, exon 1 of 3) 129 AT1G56090 AT1G56090 T6H22.6|T6H22_6 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding common peak3221 1 20980758 20981041 + intron (AT1G56100.1, intron 4 of 4) -1451 AT1G56090 AT1G56090 T6H22.6|T6H22_6 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding VNsp peak3225 1 20995058 20995781 + exon (AT1G56130.3, exon 19 of 20) -1847 AT1G56120 AT1G56120 T6H22.9|T6H22_9 Leucine-rich repeat transmembrane protein kinase protein-coding common peak3226 1 21000158 21002164 + promoter-TSS (AT1G56130.2) -148 AT1G56130 AT1G56130 T6H22.8|T6H22_8 Leucine-rich repeat transmembrane protein kinase protein-coding common peak3227 1 21007158 21008876 + promoter-TSS (AT1G56140.1) -162 AT1G56140 AT1G56140 T6H22.26|T6H22_26 Leucine-rich repeat transmembrane protein kinase protein-coding common peak3231 1 21019115 21019477 + Intergenic 1985 AT1G56150 AT1G56150 F14G9.23|SAUR71|SMALL AUXIN UPREGULATED 71 SAUR-like auxin-responsive protein family protein-coding common peak3243 1 21071337 21071889 + promoter-TSS (AT1G56270.1) 37 AT1G56270 AT1G56270 F14G9.12|F14G9_12 RPB1a protein-coding common peak3246 1 21080130 21080473 + exon (AT1G56300.1, exon 1 of 5) 122 AT1G56300 AT1G56300 F14G9.9|F14G9_9 Chaperone DnaJ-domain superfamily protein protein-coding common peak3247 1 21082194 21082508 + promoter-TSS (AT1G56310.2) -139 AT1G56310 AT1G56310 F14G9.8|F14G9_8 Polynucleotidyl transferase, ribonuclease H-like superfamily protein protein-coding common peak3254 1 21114340 21114750 + promoter-TSS (AT1G56400.1) -924 AT1G56400 AT1G56400 F13N6.18|F13N6_18 F-box family protein protein-coding VNsp peak3257 1 21124390 21124786 + promoter-TSS (AT1G56420.1) -97 AT1G56420 AT1G56420 F13N6.17|F13N6_17 antigenic heat-stable protein protein-coding VNsp peak3266 1 21180006 21181706 + promoter-TSS (AT1G56540.2) -729 AT1G56540 AT1G56540 F25P12.101|F25P12_101 Disease resistance protein (TIR-NBS-LRR class) family protein-coding common peak3269 1 21197708 21198856 + exon (AT1G56580.1, exon 1 of 1) 844 AT1G56580 SVB F25P12.97|F25P12_97|SMALLER WITH VARIABLE BRANCHES plant/protein (Protein of unknown function, DUF538) protein-coding VNsp peak3288 1 21311316 21312173 + promoter-TSS (AT1G57540.2) -223 AT1G57540 AT1G57540 F25P12.4 40S ribosomal protein protein-coding common peak3292 1 21324616 21325490 + promoter-TSS (AT1G57580.1) -26 AT1G57580 AT1G57580 T8L23.5|T8L23_5 F-box family protein protein-coding common peak3298 1 21362706 21363424 + exon (AT1G57680.2, exon 2 of 2) 1621 AT1G57680 Cand1 T8L23.15|T8L23_15|candidate G-protein Coupled Receptor 1 plasminogen activator inhibitor protein-coding common peak3299 1 21363705 21365100 + exon (AT1G57680.3, exon 1 of 2) 284 AT1G57680 Cand1 T8L23.15|T8L23_15|candidate G-protein Coupled Receptor 1 plasminogen activator inhibitor protein-coding common peak3305 1 21394345 21395694 + promoter-TSS (AT1G57770.1) -77 AT1G57770 AT1G57770 F12K22.18 FAD/NAD(P)-binding oxidoreductase family protein protein-coding common peak3313 1 21429050 21429575 + TTS (AT1G57860.1) 1598 AT1G57860 AT1G57860 F12K22.19 Translation protein SH3-like family protein protein-coding VNsp peak3316 1 21448754 21449648 + Intergenic -1699 AT1G58007 AT1G58007 - multidrug resistance protein protein-coding common peak3321 1 21507229 21507899 + exon (AT1G58080.1, exon 1 of 11) 115 AT1G58080 ATP-PRT1 ATATP-PRT1|ATP PHOSPHORIBOSYL TRANSFERASE|ATP phosphoribosyl transferase 1|HISN1A|T15M6.9|T15M6_9 ATP phosphoribosyl transferase 1 protein-coding common peak3325 1 21520058 21521080 + exon (AT1G58120.1, exon 1 of 1) 168 AT1G58120 AT1G58120 T15M6.13 hypothetical protein protein-coding VNsp peak3338 1 21602178 21602810 + promoter-TSS (AT1G58250.2) -754 AT1G58250 SAB F16M22.5|F16M22_5|HPS4|SABRE|hypersensitive to Pi starvation 4 HYPERSENSITIVE TO PI STARVATION 4 protein-coding VNsp peak3340 1 21610368 21610818 + promoter-TSS (AT1G58265.1) -316 AT1G58265 AT1G58265 - Cytochrome P450 superfamily protein protein-coding common peak3344 1 21625866 21626828 + promoter-TSS (AT1G58290.1) 55 AT1G58290 HEMA1 Arabidopsis thaliana hemA 1|AtHEMA1|F19C14.9|F19C14_9 Glutamyl-tRNA reductase family protein protein-coding common peak3348 1 21662454 21663307 + TTS (AT1G58350.4) 4558 AT1G58350 ZW18 F19C14.4|F19C14_4 Putative serine esterase family protein protein-coding common peak3363 1 21741620 21741859 + Intergenic 2138 AT1G58590 AT1G58590 - ncRNA ncRNA common peak3365 1 21753894 21754422 + intron (AT1G58602.1, intron 2 of 8) 7785 AT1G58602 AT1G58602 - LRR and NB-ARC domains-containing disease resistance protein protein-coding VNsp peak3366 1 21853196 21853687 + promoter-TSS (AT1G59470.1) -57 AT1G59470 AT1G59470 - B-block-binding subunit of TFIIIC protein protein-coding common peak3370 1 21881156 21882363 + promoter-TSS (AT1G59550.1) 160 AT1G59560 ZCF61 DAL2|DIAP1-like protein 2|SP1-like 1|SPL1|T30E16.12|T30E16_12 E3 Ubiquitin ligase family protein protein-coding common peak3390 1 21989683 21990524 + exon (AT1G59760.1, exon 1 of 14) 183 AT1G59760 MTR4 AtMTR4|F23H11.8|F23H11_8|homolog of yeast MTR4 RNA helicase, ATP-dependent, SK12/DOB1 protein protein-coding common peak3402 1 22060474 22061172 + promoter-TSS (AT1G59920.1) 693 AT1G59930 AT1G59930 F23H11.24|F23H11_24 MADS-box family protein protein-coding common peak3408 1 22094796 22094988 + promoter-TSS (AT1G60000.2) -90 AT1G60000 AT1G60000 T2K10.5|T2K10_5 RNA-binding (RRM/RBD/RNP motifs) family protein protein-coding common peak3414 1 22148807 22150088 + promoter-TSS (ENSRNA049757716-T1) 79 AT1G60070 AT1G60070 T2K10.12|T2K10_12 Adaptor protein complex AP-1, gamma subunit protein-coding common peak3415 1 22154597 22155447 + promoter-TSS (AT1G60090.2) -379 AT1G60080 AT1G60080 T2K10.14|T2K10_14 3'-5'-exoribonuclease family protein protein-coding common peak3416 1 22163373 22163742 + Intergenic 3464 AT1G60095 AT1G60095 T13D8.1|T13D8_1 Mannose-binding lectin superfamily protein protein-coding VNsp peak3436 1 22280287 22280772 + promoter-TSS (AT1G60470.1) 64 AT1G60470 GolS4 AtGolS4|F8A5.2|F8A5_2|galactinol synthase 4 galactinol synthase 4 protein-coding common peak3454 1 22362187 22362574 + TTS (AT1G60740.1) 1403 AT1G60740 AT1G60740 F8A5.25|F8A5_25 Thioredoxin superfamily protein protein-coding common peak3465 1 22423013 22424524 + promoter-TSS (AT1G60900.1) -126 AT1G60900 AT1G60900 T7P1.5|T7P1_5 U2 snRNP auxilliary factor, large subunit, splicing factor protein-coding common peak3469 1 22449447 22449928 + promoter-TSS (AT1G60970.1) -151 AT1G60970 AT1G60970 T7P1.11|T7P1_11 SNARE-like superfamily protein protein-coding common peak3474 1 22482613 22483895 + TTS (AT1G61030.1) 150 AT1G61040 VIP5 T7P1.17|T7P1_17|vernalization independence 5 plus-3 domain-containing protein protein-coding common peak3484 1 22542245 22543004 + promoter-TSS (AT1G61150.11) -7 AT1G61150 AT1G61150 F11P17.12|F11P17_12 LisH and RanBPM domains containing protein protein-coding common peak3487 1 22562832 22564785 + promoter-TSS (AT1G61210.3) -231 AT1G61200 AT1G61200 F11P17.8|F11P17_8 homeobox-leucine zipper protein-like protein protein-coding common peak3494 1 22604575 22606197 + TTS (AT1G61280.2) 381 AT1G61290 SYP124 ATSYP124|T1F9.22|T1F9_22|syntaxin of plants 124 syntaxin of plants 124 protein-coding VNsp peak3510 1 22689109 22690455 + promoter-TSS (AT1G61490.2) -171 AT1G61490 AT1G61490 T1F9.1|T1F9_1 S-locus lectin protein kinase family protein protein-coding common peak3511 1 22693638 22694096 + promoter-TSS (AT1G61500.2) -68 AT1G61500 AT1G61500 T25B24.15|T25B24_15 S-locus lectin protein kinase family protein protein-coding VNsp peak3513 1 22701764 22703080 + promoter-TSS (AT1G61540.1) -76 AT1G61540 AT1G61540 T25B24.11|T25B24_11 Galactose oxidase/kelch repeat superfamily protein protein-coding common peak3529 1 22782328 22782707 + TTS (AT1G61690.1) -1129 AT1G61688 AT1G61688 - Defensin-like (DEFL) family protein protein-coding VNsp peak3538 1 22840081 22840433 + Intergenic 3930 AT1G61820 BGLU46 F8K4.3|F8K4_3|beta glucosidase 46 beta glucosidase 46 protein-coding common peak3541 1 22855551 22856910 + exon (AT1G61850.1, exon 1 of 17) 479 AT1G61850 AT1G61850 F8K4.6|F8K4_6 phospholipase A I-like protein protein-coding common peak3542 1 22862196 22863803 + TTS (AT1G61850.1) 1899 AT1G61860 AT1G61860 F8K4.7|F8K4_7 Protein kinase superfamily protein protein-coding common peak3543 1 22864002 22865063 + TTS (AT1G61870.1) 366 AT1G61860 AT1G61860 F8K4.7|F8K4_7 Protein kinase superfamily protein protein-coding common peak3558 1 22938452 22939155 + exon (AT1G62050.1, exon 1 of 2) 221 AT1G62050 AT1G62050 - Ankyrin repeat family protein protein-coding common peak3573 1 23003834 23004727 + promoter-TSS (AT1G62270.1) -219 AT1G62270 AT1G62270 F19K23.19|F19K23_19 F-box and associated interaction domains-containing protein protein-coding common peak3584 1 23044182 23044634 + exon (AT1G62320.2, exon 3 of 11) 447 AT1G62320 AT1G62320 F24O1.4|F24O1_4 ERD (early-responsive to dehydration stress) family protein protein-coding VNsp peak3585 1 23049774 23050118 + promoter-TSS (AT1G62333.1) -435 AT1G62333 AT1G62333 - hypothetical protein protein-coding common peak3597 1 23116395 23118272 + exon (AT1G62450.1, exon 1 of 5) 261 AT1G62450 AT1G62450 F24O1.20 Immunoglobulin E-set superfamily protein protein-coding common peak3630 1 23264010 23264733 + promoter-TSS (AT1G62820.1) 28 AT1G62820 AT1G62820 F23N19.25|F23N19_25 Calcium-binding EF-hand family protein protein-coding common peak3634 1 23291528 23292922 + intron (AT1G62880.2, intron 1 of 1) 270 AT1G62880 AT1G62880 F16P17.3|F16P17_3 Cornichon family protein protein-coding common peak3650 1 23383855 23384706 + exon (AT1G63060.1, exon 2 of 4) 309 AT1G63060 AT1G63060 F16M19.2|F16M19_2 ribosome biogenesis NEP1-like protein protein-coding common peak3653 1 23392283 23393147 + exon (AT1G63090.1, exon 1 of 3) 158 AT1G63090 PP2-A11 AtPP2-A11|F16M19.16|F16M19_16|phloem protein 2-A11 phloem protein 2-A11 protein-coding common peak3657 1 23423266 23424192 + exon (AT1G63160.1, exon 1 of 7) 185 AT1G63160 RFC2 EMB2811|EMBRYO DEFECTIVE 2811|F16M19.6|F16M19_6|replication factor C 2 replication factor C 2 protein-coding common peak3675 1 23509382 23510501 + TTS (AT1G63400.1) 2056 AT1G63410 AT1G63410 F2K11.21|F2K11_21 LURP-one-like protein (DUF567) protein-coding common peak3681 1 23534129 23535139 + promoter-TSS (AT1G63460.1) -312 AT1G63460 GPX8 ATGPX8|F2K11.16|F2K11_16|glutathione peroxidase 8 glutathione peroxidase 8 protein-coding common peak3685 1 23558333 23559466 + promoter-TSS (AT1G63520.1) 359 AT1G63510 AT1G63510 51790.TRNA-CYS-1 tRNA tRNA common peak3689 1 23585503 23586927 + promoter-TSS (AT1G63610.1) -431 AT1G63610 AT1G63610 F2K11.3|F2K11_3 hypothetical protein protein-coding common peak3691 1 23594676 23596572 + exon (AT1G63640.1, exon 1 of 21) 151 AT1G63640 AT1G63640 F2K11.1|F2K11_1 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein protein-coding common peak3700 1 23654287 23655799 + exon (AT1G63750.1, exon 3 of 3) 4195 AT1G63750 AT1G63750 F24D7.6|F24D7_6 Disease resistance protein (TIR-NBS-LRR class) family protein-coding common peak3740 1 23867445 23868202 + promoter-TSS (AT1G64320.2) -148 AT1G64320 AT1G64320 F15H21.20|F15H21_20 myosin heavy chain-like protein protein-coding VNsp peak3741 1 23870180 23871103 + promoter-TSS (AT1G64330.1) -244 AT1G64330 AT1G64330 F15H21.4|F15H21_4 myosin heavy chain-like protein protein-coding common peak3742 1 23877246 23877972 + promoter-TSS (AT1G64340.2) -457 AT1G64340 AT1G64340 F15H21.3|F15H21_3 Serine/Threonine-kinase protein-coding VNsp peak3744 1 23883999 23884490 + TTS (AT1G64350.1) -1738 AT1G64355 AT1G64355 - 1-acyl-sn-glycerol-3-phosphate acyltransferase protein-coding VNsp peak3752 1 23932880 23934086 + TTS (ENSRNA049492562-T1) 103 AT1G64430 AT1G64430 F15H21.10|F15H21_10 Pentatricopeptide repeat (PPR) superfamily protein protein-coding common peak3778 1 24081892 24083194 + promoter-TSS (AT1G64790.1) -36 AT1G64795 AT1G64795 - hypothetical protein protein-coding common peak3779 1 24092039 24092738 + exon (AT1G64830.1, exon 1 of 1) 191 AT1G64830 AT1G64830 F13O11.13|F13O11_13 Eukaryotic aspartyl protease family protein protein-coding common peak3792 1 24170241 24170704 + exon (AT1G65060.1, exon 2 of 7) 1030 AT1G65060 4CL3 4-COUMARATE:COA LIGASE|4-coumarate:CoA ligase 3|F16G16.6|F16G16_6 4-coumarate:CoA ligase 3 protein-coding common peak3798 1 24205500 24206346 + promoter-TSS (AT1G65150.2) -93 AT1G65150 AT1G65150 T23K8.6|T23K8_6 TRAF-like family protein protein-coding common peak3801 1 24225572 24226365 + promoter-TSS (AT1G65220.1) 17 AT1G65220 AT1G65220 T23K8.13|T23K8_13 ARM repeat superfamily protein protein-coding common peak3804 1 24233071 24234495 + promoter-TSS (AT1G65240.1) -260 AT1G65240 AT1G65240 T23K8.15|T23K8_15 Eukaryotic aspartyl protease family protein protein-coding common peak3806 1 24241380 24241779 + promoter-TSS (AT1G65270.1) -127 AT1G65270 AT1G65270 T8F5.4|T8F5_4 ER membrane protein complex subunit-like protein protein-coding common peak3812 1 24277229 24277817 + promoter-TSS (AT1G65352.1) -248 AT1G65350 UBQ13 T8F5.13|T8F5_13|ubiquitin 13 ubiquitin 13 protein-coding common peak3817 1 24290616 24291179 + Intergenic -1475 AT1G65390 PP2-A5 AT1G65400|ATPP2-A5|T8F5.18|T8F5_18|phloem protein 2 A5 phloem protein 2 A5 protein-coding common peak3818 1 24294827 24295418 + promoter-TSS (AT1G65410.1) -47 AT1G65410 ABCI13 ATNAP11|ATP-binding cassette I13|NAP11|T8F5.19|T8F5_19|TGD3|TRIGALACTOSYLDIACYLGLYCEROL 3|non-intrinsic ABC protein 11 non-intrinsic ABC protein 11 protein-coding common peak3821 1 24305729 24307320 + promoter-TSS (AT1G65430.1) -186 AT1G65430 ARI8 ARABIDOPSIS ARIADNE 8|ARIADNE 8|ATARI8|T8F5.21|T8F5_21 IBR domain-containing protein protein-coding common peak3822 1 24314155 24315747 + promoter-TSS (AT1G65450.1) -312 AT1G65440 GTB1 GLOBAL TRANSCRIPTION FACTOR GROUP B|T8F5.22|T8F5_22|global transcription factor group B1 global transcription factor group B1 protein-coding common peak3831 1 24350593 24350893 + TTS (AT1G65486.2) 1111 AT1G65486 AT1G65486 - transmembrane protein protein-coding VNsp peak3832 1 24353441 24354765 + promoter-TSS (AT1G65490.1) -543 AT1G65490 AT1G65490 F5I14.26 transmembrane protein protein-coding VNsp peak3833 1 24361137 24362602 + TTS (AT1G65540.2) 185 AT1G65520 ECI1 ''delta(3)|ARABIDOPSIS THALIANA DELTA(3)|ATECI1|DELTA(2)-ENOYL COA ISOMERASE 1|ECHIC|ENOYL-COA HYDRATASE/ISOMERASE C|F5I14.5|F5I14_5|PEC11|delta(2)-enoyl CoA isomerase 1|delta(2)-enoyl CoA isomerase 1''|delta(3) delta(3), delta(2)-enoyl CoA isomerase 1 protein-coding common peak3834 1 24373754 24376089 + exon (AT1G65570.1, exon 2 of 3) 974 AT1G65570 AT1G65570 F5I14.10|F5I14_10 Pectin lyase-like superfamily protein protein-coding common peak3835 1 24383254 24384297 + exon (AT1G65580.1, exon 1 of 11) 311 AT1G65580 FRA3 F5I14.11|F5I14_11|FRAGILE FIBER3 Endonuclease/exonuclease/phosphatase family protein protein-coding common peak3851 1 24458308 24459154 + exon (AT1G65760.1, exon 1 of 2) 140 AT1G65760 AT1G65760 F1E22.12|F1E22_12 ascorbic acid mannose pathway regulator (DUF295) protein-coding common peak3853 1 24462445 24462838 + promoter-TSS (AT1G65770.1) -903 AT1G65770 AMR1 F1E22.13|F1E22_13|ascorbic acid mannose pathway regulator 1 ascorbic acid mannose pathway regulator 1 protein-coding VNsp peak3866 1 24509490 24510112 + exon (AT1G65880.1, exon 2 of 3) 941 AT1G65880 BZO1 F12P19.5|F12P19_5|benzoyloxyglucosinolate 1 benzoyloxyglucosinolate 1 protein-coding common peak3885 1 24586507 24587225 + promoter-TSS (AT1G66040.1) -106 AT1G66040 VIM4 F15E12.8|F15E12_8|ORTH4|ORTHRUS 4|VARIANT IN METHYLATION 4 Zinc finger (C3HC4-type RING finger) family protein protein-coding common peak3902 1 24664934 24666475 + exon (AT1G66210.1, exon 8 of 8) 3146 AT1G66210 AT1G66210 T6J19.3|T6J19_3 Subtilisin-like serine endopeptidase family protein protein-coding common peak3905 1 24683744 24684147 + promoter-TSS (AT1G66235.1) 41 AT1G66235 AT1G66235 - no-apical-meristem-associated carboxy-terminal domain protein protein-coding VNsp peak3913 1 24717598 24718318 + promoter-TSS (AT1G66300.2) 92 AT1G66300 AT1G66300 T27F4.5|T27F4_5 F-box/RNI-like/FBD-like domains-containing protein protein-coding common peak3916 1 24724074 24725081 + promoter-TSS (AT1G66310.1) -102 AT1G66310 AT1G66310 T27F4.6|T27F4_6 F-box/RNI-like/FBD-like domains-containing protein protein-coding common peak3919 1 24737092 24738182 + promoter-TSS (AT1G66345.1) -82 AT1G66345 AT1G66345 - Pentatricopeptide repeat (PPR) superfamily protein protein-coding common peak3938 1 24826286 24826539 + exon (AT1G66540.1, exon 3 of 3) 1916 AT1G66540 AT1G66540 F28G11.4|F28G11_4 Cytochrome P450 superfamily protein protein-coding common peak3939 1 24838464 24840825 + exon (AT1G66580.1, exon 2 of 4) 554 AT1G66580 SAG24 RPL10C|T12I7.3|T12I7_3|ribosomal protein L10 C|senescence associated gene 24 senescence associated gene 24 protein-coding common peak3946 1 24862411 24863912 + TTS (AT1G66670.1) 207 AT1G66660 AT1G66660 F4N21.20|F4N21_20 Protein with RING/U-box and TRAF-like domain protein-coding common peak3951 1 24884033 24885595 + TTS (at1g66725) 133 AT1G66730 LIG6 AtLIG6|DNA LIGASE 6|F4N21.14|F4N21_14 DNA LIGASE 6 protein-coding common peak3953 1 24892989 24893328 + intron (AT1G66740.1, intron 2 of 2) 818 AT1G66740 SGA2 ANTI- SILENCING FUNCTION 1A|ASF1A|AtSP7|F4N21.13|F4N21_13|SP7 ASF1 like histone chaperone protein-coding common peak3954 1 24896850 24897698 + TTS (AT1G66750.1) 2751 AT1G66750 CAK4 AT;CDKD;2|CAK4AT|CDK-ACTIVATING KINASE 4|CDK-activating kinase 4|CDKD1;2|CDKD;2|CYCLIN-DEPENDENT KINASE D1;2|F4N21.12|F4N21_12 CDK-activating kinase 4 protein-coding common peak3975 1 24988895 24991182 + promoter-TSS (AT1G66960.3) -182 AT1G66960 LUP5 F1O19.4|F1O19_4 Terpenoid cyclases family protein protein-coding common peak3977 1 25013365 25014439 + promoter-TSS (AT1G67020.1) 823 AT1G67025 AT1G67025 - wall-associated receptor kinase carboxy-terminal protein protein-coding common peak3984 1 25038950 25039628 + TTS (AT1G67060.3) -2544 AT1G67070 DIN9 DARK INDUCIBLE 9|F1O19.12|F1O19_12|PHOSPHOMANNOSE ISOMERASE 2|PMI2 Mannose-6-phosphate isomerase, type I protein-coding common peak3991 1 25094990 25095898 + promoter-TSS (AT1G67120.2) 82 AT1G67120 AT1G67120 AtMDN1|F5A8.11|F5A8_11|MDN1|MIDASIN 1 midasin-like protein protein-coding common peak3992 1 25116739 25118050 + promoter-TSS (AT1G67140.2) 29 AT1G67140 SWEETIE F5A8.12|F5A8_12 HEAT repeat-containing protein protein-coding common peak4003 1 25192261 25193658 + TTS (AT1G67300.3) 281 AT1G67290 GLOX1 F1N21.11|glyoxal oxidase 1 glyoxal oxidase-related protein protein-coding common peak4005 1 25202834 25203918 + promoter-TSS (AT1G67310.1) -250 AT1G67310 AT1G67310 F1N21.13 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain protein-coding common peak4008 1 25214802 25216141 + promoter-TSS (AT1G67328.1) -181 AT1G67328 AT1G67328 - ncRNA ncRNA common peak4017 1 25243826 25245055 + promoter-TSS (AT1G67390.1) -250 AT1G67390 AT1G67390 F1N21.21 F-box family protein protein-coding common peak4021 1 25276127 25277017 + promoter-TSS (AT1G67480.3) 20 AT1G67480 AT1G67480 T1F15.5|T1F15_5 Galactose oxidase/kelch repeat superfamily protein protein-coding VNsp peak4031 1 25324655 25325565 + promoter-TSS (AT1G67570.1) -28 AT1G67570 AT1G67570 F12B7.12|F12B7_12 zinc finger CONSTANS-like protein (DUF3537) protein-coding common peak4034 1 25341352 25343479 + TTS (AT1G67620.1) 314 AT1G67623 AT1G67623 F12A21.25|F12A21_25 F-box family protein protein-coding common peak4039 1 25365202 25366511 + TTS (AT1G67670.1) 486 AT1G67670 AT1G67670 F12A21.18|F12A21_18 hypothetical protein protein-coding VNsp peak4047 1 25403016 25403943 + exon (AT1G67750.1, exon 4 of 4) 1965 AT1G67750 AT1G67750 F12A21.12|F12A21_12 Pectate lyase family protein protein-coding common peak4068 1 25496084 25497120 + promoter-TSS (AT1G68020.3) -326 AT1G68020 ATTPS6 T23K23.13|T23K23_13|TPS6|TREHALOSE -6-PHOSPHATASE SYNTHASE S6 UDP-Glycosyltransferase / trehalose-phosphatase family protein protein-coding common peak4072 1 25524201 25525666 + TTS (AT1G68100.1) 215 AT1G68110 AT1G68110 T23K23.4|T23K23_4 ENTH/ANTH/VHS superfamily protein protein-coding common peak4073 1 25525912 25527814 + TTS (AT1G68110.1) 242 AT1G68120 BPC3 ATBPC3|BBR|T23K23.3|T23K23_3|basic pentacysteine 3 BASIC PENTACYSTEINE protein protein-coding common peak4099 1 25656799 25659786 + exon (AT1G68440.1, exon 1 of 1) 535 AT1G68440 AT1G68440 T2E12.1|T2E12_1 transmembrane protein protein-coding common peak4105 1 25693031 25693588 + promoter-TSS (AT1G68490.1) -140 AT1G68490 AT1G68490 T26J14.6|T26J14_6 translocase subunit seca protein-coding common peak4124 1 25781035 25782057 + promoter-TSS (AT1G68670.1) -255 AT1G68670 AT1G68670 F24J5.9|F24J5_9 myb-like transcription factor family protein protein-coding common peak4135 1 25836992 25837527 + exon (AT1G68790.1, exon 6 of 8) 2282 AT1G68790 LINC3 CROWDED NUCLEI 3|CRWN3|F14K14.10|F14K14_10|LITTLE NUCLEI3 little nuclei3 protein-coding common peak4147 1 25883854 25884604 + exon (AT1G68850.1, exon 4 of 4) 1032 AT1G68850 AT1G68850 T6L1.4|T6L1_4 Peroxidase superfamily protein protein-coding common peak4150 1 25896729 25897297 + exon (AT1G68890.1, exon 1 of 28) 159 AT1G68890 PHYLLO T6L1.7|T6L1_7 2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein protein-coding common peak4179 1 26046368 26047781 + TTS (AT1G69290.1) 1116 AT1G69280 AT1G69280 F4N2.23|F4N2_23 hypothetical protein protein-coding VNsp peak4213 1 26195260 26196359 + promoter-TSS (AT1G69640.1) -83 AT1G69640 SBH1 F24J1.22|sphingoid base hydroxylase 1 sphingoid base hydroxylase 1 protein-coding common peak4246 1 26344579 26344923 + intron (AT1G69940.1, intron 1 of 4) 307 AT1G69940 PPME1 ATPPME1|T17F3.3|T17F3_3 Pectin lyase-like superfamily protein protein-coding common peak4255 1 26381253 26382985 + promoter-TSS (AT1G09133.1) 106 AT1G70050 AT1G70050 50885.TRNA-PRO-1 tRNA tRNA common peak4276 1 26474716 26476678 + promoter-TSS (AT1G70290.1) -864 AT1G70290 TPS8 ATTPS8|ATTPSC|F17O7.18|F17O7_18|trehalose-6-phosphatase synthase S8 trehalose-6-phosphatase synthase S8 protein-coding common peak4298 1 26555240 26556699 + exon (AT1G70460.1, exon 1 of 8) 264 AT1G70460 PERK13 AtPERK13|F24J13.3|F24J13_3|RHS10|proline-rich extensin-like receptor kinase 13|root hair specific 10 root hair specific 10 protein-coding common peak4337 1 26714404 26715587 + promoter-TSS (AT1G70840.1) -926 AT1G70840 MLP31 F15H11.9|F15H11_9|MLP-like protein 31 MLP-like protein 31 protein-coding common peak4354 1 26786144 26786459 + exon (AT1G71010.1, exon 7 of 11) 3961 AT1G71015 AT1G71015 - plastid movement impaired protein protein-coding common peak4359 1 26804433 26804913 + promoter-TSS (AT1G71050.1) -381 AT1G71050 HIPP20 F23N20.4|F23N20_4|heavy metal associated isoprenylated plant protein 20 Heavy metal transport/detoxification superfamily protein protein-coding common peak4374 1 26872037 26872664 + promoter-TSS (AT1G71280.2) -198 AT1G71280 AT1G71280 F3I17.7|F3I17_7 DEA(D/H)-box RNA helicase family protein protein-coding common peak4376 1 26879521 26880219 + TTS (AT1G09233.1) 154 AT1G71310 RAD52-1 F3I17.4|F3I17_4|ODB1|Organellar DNA-Binding protein 1|RAD52-1A|RAD52-1B.1|RAD52-1B.2|radiation sensitive 51-1 cobalt ion binding protein protein-coding common peak4399 1 26989273 26989858 + promoter-TSS (AT1G71750.1) 215 AT1G71760 AT1G71760 F14O23.14|F14O23_14 hypothetical protein protein-coding common peak4400 1 26993263 26993814 + exon (AT1G71770.1, exon 2 of 8) 721 AT1G71770 PAB5 F14O23.15|F14O23_15|POLY(A)-BINDING PROTEIN|poly(A)-binding protein 5 poly(A)-binding protein 5 protein-coding common peak4408 1 27028419 27029427 + promoter-TSS (AT1G71865.1) -193 AT1G71865 AT1G71865 - PyrD protein-coding common peak4419 1 27078239 27079384 + TTS (AT1G71930.1) 280 AT1G71940 AT1G71940 F17M19.9|F17M19_9 SNARE associated Golgi protein family protein-coding common peak4452 1 27273559 27274484 + promoter-TSS (AT1G72440.1) -86 AT1G72440 EDA25 SLOW WALKER2|SWA2|T10D10.9|T10D10_9|embryo sac development arrest 25 CCAAT-binding factor protein-coding common peak4462 1 27323803 27324656 + promoter-TSS (AT1G72550.2) -117 AT1G72550 AT1G72550 F28P22.26|F28P22_26 tRNA synthetase beta subunit family protein protein-coding common peak4502 1 27544781 27546487 + promoter-TSS (AT1G73240.1) -714 AT1G73240 AT1G73240 T18K17.9|T18K17_9 nucleoporin protein Ndc1-Nup protein protein-coding common peak4524 1 27684792 27685852 + exon (AT1G73630.1, exon 1 of 1) 649 AT1G73630 AT1G73630 F25P22.4|F25P22_4 EF hand calcium-binding protein family protein-coding common peak4592 1 28020085 28021120 + promoter-TSS (AT1G74560.1) 36 AT1G74580 AT1G74580 F1M20.26|F1M20_26 Pentatricopeptide repeat (PPR) superfamily protein protein-coding common peak4609 1 28104834 28105312 + exon (AT1G74800.1, exon 1 of 7) 120 AT1G74800 AT1G74800 F25A4.23|F25A4_23 Galactosyltransferase family protein protein-coding VNsp peak4681 1 28459984 28460781 + exon (AT1G75800.1, exon 3 of 3) -1062 AT1G75810 AT1G75810 T4O12.4|T4O12_4 transmembrane protein protein-coding common peak4691 1 28515046 28515452 + TTS (AT1G75940.1) 667 AT1G75945 AT1G75945 - hypothetical protein protein-coding common peak4692 1 28515923 28516328 + promoter-TSS (AT1G75950.1) -209 AT1G75945 AT1G75945 - hypothetical protein protein-coding common peak4736 1 28759189 28760636 + TTS (AT1G76620.1) 213 AT1G76630 AT1G76630 - Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding common peak4746 1 28813127 28813767 + promoter-TSS (AT1G76760.1) -7 AT1G76770 AT1G76770 F28O16.14|F28O16_14 HSP20-like chaperones superfamily protein protein-coding common peak4782 1 29001919 29002744 + promoter-TSS (AT1G77180.1) -45 AT1G77190 AT1G77190 50969.TRNA-SER-1 tRNA tRNA common peak4792 1 29051302 29052167 + exon (AT1G77310.1, exon 1 of 14) 229 AT1G77310 AT1G77310 F2P24.2|F2P24_2|UBN2|Ubinuclein 2 wound-responsive family protein protein-coding common peak4831 1 29269986 29271165 + exon (AT1G77840.1, exon 2 of 2) -1499 AT1G77850 ARF17 F28K19.6|F28K19_6|auxin response factor 17 auxin response factor 17 protein-coding common peak4835 1 29300956 29302134 + TTS (AT1G77920.1) 545 AT1G77930 AT1G77930 DJC65|DNA J protein C65|F28K19.14|F28K19_14 Chaperone DnaJ-domain superfamily protein protein-coding common peak4864 1 29452002 29453187 + promoter-TSS (AT1G78270.1) 39 AT1G78280 AT1G78280 F3F9.18|F3F9_18 transferases, transferring glycosyl groups protein-coding common peak4868 1 29470360 29472668 + Intergenic 2489 AT1G78340 GSTU22 ATGSTU22|F3F9.13|F3F9_13|glutathione S-transferase TAU 22 glutathione S-transferase TAU 22 protein-coding common peak4874 1 29526090 29527338 + promoter-TSS (AT1G78490.1) -147 AT1G78490 CYP708A3 ''cytochrome P450|T30F21.17|T30F21_17|cytochrome P450|family 708|polypeptide 3|polypeptide 3''|subfamily A cytochrome P450, family 708, subfamily A, polypeptide 3 protein-coding common peak4886 1 29612361 29612746 + TTS (AT1G78750.1) -1061 AT1G78740 AT1G78740 F9K20.22|F9K20_22 RNI-like superfamily protein protein-coding common peak4887 1 29616688 29617619 + promoter-TSS (AT1G78760.1) 234 AT1G78770 APC6 F9K20.19|F9K20_19|anaphase promoting complex 6 anaphase promoting complex 6 protein-coding common peak4902 1 29724218 29725513 + promoter-TSS (AT1G79000.1) -117 AT1G79000 HAC1 ARABIDOPSIS HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1|ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2|ATHAC1|ATHPCAT2|P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2|PCAT2|YUP8H12R.38|YUP8H12R_38|histone acetyltransferase of the CBP family 1 histone acetyltransferase of the CBP family 1 protein-coding common peak4916 1 29799968 29800826 + promoter-TSS (AT1G79230.2) -166 AT1G79230 MST1 ARABIDOPSIS THALIANA RHODANESE HOMOLOGUE 1|ATMST1|ATRDH1|MERCAPTOPYRUVATE SULFURTRANSFERASE|ST1|STR1|SULFURTRANSFERASE 1|YUP8H12R.17|YUP8H12R_17|mercaptopyruvate sulfurtransferase 1 mercaptopyruvate sulfurtransferase 1 protein-coding common peak4979 1 30173659 30174192 + promoter-TSS (AT1G80245.1) 160 AT1G80250 AT1G80250 51605.TRNA-TRP-1|60014.TRNA-TRP-1|AT1G80242 tRNA tRNA common peak4985 1 30207531 30209019 + promoter-TSS (AT1G80350.1) -7 AT1G80350 ERH3 AAA1|ARABIDOPSIS THALIANA KATANIN SMALL SUBUNIT|ATKSS|ATKTN1|BOT1|BOTERO 1|CAD ATPASE|ECTOPIC ROOT HAIR 3|F5I6.10|F5I6_10|FAT ROOT|FRA2|FRAGILE FIBER 2|FRC2|FTR|FURCA2|KATANIN 1|KTN1|LUE1 P-loop containing nucleoside triphosphate hydrolases superfamily protein protein-coding common peak4993 1 30255556 30256525 + promoter-TSS (AT1G80470.1) -25 AT1G80470 AT1G80470 T21F11.20|T21F11_20 F-box/RNI-like/FBD-like domains-containing protein protein-coding common peak5026 2 9446 10357 + promoter-TSS (AT2G01023.1) -134 AT2G01023 AT2G01023 - hypothetical protein protein-coding common peak5027 2 52175 53206 + TTS (AT2G01045.1) -1203 AT2G01035 AT2G01035 - hypothetical protein protein-coding common peak5044 2 134224 134583 + promoter-TSS (AT2G01250.1) 52 AT2G01250 AT2G01250 F10A8.13|F10A8_13 Ribosomal protein L30/L7 family protein protein-coding common peak5047 2 143210 144485 + exon (AT2G01275.3, exon 2 of 6) 191 AT2G01275 AT2G01275 - RING/FYVE/PHD zinc finger superfamily protein protein-coding common peak5051 2 171642 171997 + promoter-TSS (AT2G03945.1) -357 AT2G01390 EMB3111 EMBRYO DEFECTIVE 3111|F10A8.29 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding VNsp peak5052 2 175561 176766 + TTS (AT2G01400.1) 244 AT2G01410 AT2G01410 F10A8.30 NHL domain-containing protein protein-coding common peak5057 2 199513 199974 + promoter-TSS (AT2G01440.1) -463 AT2G01440 AT2G01440 F2I9.6|F2I9_6 DEAD/DEAH box RNA helicase family protein protein-coding VNsp peak5058 2 201666 202481 + exon (AT2G01450.3, exon 2 of 10) 125 AT2G01450 MPK17 ATMPK17|F2I9.7|F2I9_7|MAP kinase 17 MAP kinase 17 protein-coding common peak5059 2 202796 203425 + promoter-TSS (AT2G01450.1) 16 AT2G01450 MPK17 ATMPK17|F2I9.7|F2I9_7|MAP kinase 17 MAP kinase 17 protein-coding common peak5063 2 220258 221447 + promoter-TSS (AT2G01490.1) -161 AT2G01490 PAHX F2I9.11|F2I9_11|phytanoyl-CoA 2-hydroxylase phytanoyl-CoA dioxygenase (PhyH) family protein protein-coding common peak5068 2 241859 243788 + exon (AT2G01540.1, exon 2 of 3) 826 AT2G01540 AT2G01540 F2I9.16|F2I9_16 Calcium-dependent lipid-binding (CaLB domain) family protein protein-coding common peak5070 2 251777 252192 + promoter-TSS (AT2G01560.1) -178 AT2G01560 AT2G01560 F2I9.18|F2I9_18 Plant protein 1589 of unknown function protein-coding common peak5075 2 268230 269349 + promoter-TSS (AT2G01600.1) 75 AT2G01600 AT2G01600 F2I9.22|F2I9_22 ENTH/ANTH/VHS superfamily protein protein-coding common peak5082 2 289866 292652 + exon (AT2G01660.1, exon 2 of 3) 1365 AT2G01660 PDLP6 T8O11.17|T8O11_17|plasmodesmata-located protein 6 plasmodesmata-located protein 6 protein-coding common peak5087 2 304928 305899 + promoter-TSS (AT2G01680.1) -838 AT2G01680 AT2G01680 T8O11.15|T8O11_15 Ankyrin repeat family protein protein-coding common peak5091 2 323990 324784 + promoter-TSS (AT2G01735.1) 22 AT2G01735 RIE1 RING-finger protein for embryogenesis RING-finger protein for embryogenesi protein-coding common peak5108 2 421504 422566 + exon (AT2G01913.1, exon 3 of 3) 608 AT2G01913 AT2G01913 - hypothetical protein protein-coding common peak5109 2 425652 428885 + TTS (AT2G01920.1) 1216 AT2G01920 AT2G01920 F23I14.1|F23I14_1 ENTH/VHS/GAT family protein protein-coding common peak5113 2 450187 450793 + exon (AT2G01960.1, exon 1 of 2) 111 AT2G01960 TET14 F14H20.3|F14H20_3|tetraspanin14 tetraspanin14 protein-coding common peak5120 2 489309 490498 + promoter-TSS (AT2G02050.1) -49 AT2G02050 AT2G02050 - NADH-ubiquinone oxidoreductase B18 subunit protein-coding common peak5124 2 517248 517733 + TTS (AT2G02080.1) 4217 AT2G02080 IDD4 AtIDD4|F5O4.15|F5O4_15|indeterminate(ID)-domain 4 indeterminate(ID)-domain 4 protein-coding common peak5137 2 601573 601864 + promoter-TSS (AT2G02280.1) -279 AT2G02280 PP2-B4 AtPP2-B4|T16F16.7|T16F16_7|phloem protein 2-B4 phloem protein 2-B4 protein-coding common peak5146 2 648784 650538 + promoter-TSS (AT2G02455.1) -974 AT2G02455 AT2G02455 - transmembrane protein protein-coding common peak5153 2 689234 690146 + promoter-TSS (AT2G02560.2) -94 AT2G02560 CAND1 ATCAND1|CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED 1|ETA2|HEMIVENATA|HVE|T8K22.14|T8K22_14|TIP120|cullin-associated and neddylation dissociated cullin-associated and neddylation dissociated protein-coding common peak5161 2 738323 739385 + exon (AT2G02660.1, exon 1 of 1) 350 AT2G02660 AT2G02660 T8K22.4|T8K22_4 F-box associated ubiquitination effector family protein protein-coding common peak5162 2 742361 743542 + Intergenic -2723 AT2G02680 AT2G02680 T8K22.2|T8K22_2 Cysteine/Histidine-rich C1 domain family protein protein-coding common peak5166 2 762893 763693 + TTS (AT2G04285.1) 366 AT2G02720 AT2G02720 T20F6.14|T20F6_14 Pectate lyase family protein protein-coding common peak5177 2 806740 808057 + exon (AT2G02820.1, exon 1 of 10) 358 AT2G02820 MYB88 AtMYB88|T20F6.4|T20F6_4|myb domain protein 88 myb domain protein 88 protein-coding common peak5184 2 846430 846931 + promoter-TSS (AT2G02890.1) -64 AT2G02890 AT2G02890 T17M13.6|T17M13_6 F-box family protein protein-coding common peak5189 2 861246 861859 + TTS (AT2G02960.4) 2111 AT2G02955 MEE12 maternal effect embryo arrest 12 maternal effect embryo arrest 12 protein-coding common peak5190 2 863944 865020 + promoter-TSS (AT2G02960.4) -30 AT2G02960 AT2G02960 T17M13.13|T17M13_13 RING/FYVE/PHD zinc finger superfamily protein protein-coding common peak5198 2 898855 899069 + TTS (AT2G03050.1) 1984 AT2G03050 EMB93 EMBRYO DEFECTIVE 93|SINGLET OXYGEN-LINKED DEATH ACTIVATOR 10|SOLDAT10|T17M13.22|T17M13_22 Mitochondrial transcription termination factor family protein protein-coding common peak5200 2 905358 905693 + promoter-TSS (AT2G03070.1) 12 AT2G03070 MED8 T17M13.24|T17M13_24|mediator subunit 8 mediator subunit 8 protein-coding common peak5217 2 1004882 1005360 + promoter-TSS (AT2G03300.1) -899 AT2G03300 AT2G03300 T4M8.27|T4M8_27 Toll-Interleukin-Resistance (TIR) domain family protein protein-coding common peak5221 2 1012889 1013578 + exon (AT2G03330.1, exon 2 of 3) 3989 AT2G03340 WRKY3 T4M8.23|T4M8_23|WRKY DNA-binding protein 3 WRKY DNA-binding protein 3 protein-coding common peak5224 2 1022597 1023006 + exon (AT2G03360.2, exon 2 of 2) -1615 AT2G03350 AT2G03350 T4M8.22|T4M8_22 DUF538 family protein (Protein of unknown function, DUF538) protein-coding common peak5229 2 1041220 1043106 + exon (AT2G03450.1, exon 1 of 2) 775 AT2G03450 PAP9 ATPAP9|PURPLE ACID PHOSPHATASE 9|T4M8.12|T4M8_12|purple acid phosphatase 9 purple acid phosphatase 9 protein-coding common peak5237 2 1069381 1071225 + exon (AT2G03520.1, exon 4 of 7) 812 AT2G03520 UPS4 ATUPS4|T4M8.4|T4M8_4|ureide permease 4 ureide permease 4 protein-coding common peak5238 2 1081550 1083408 + TTS (AT2G03565.1) 887 AT2G03565 AT2G03565 - hypothetical protein protein-coding common peak5239 2 1092089 1092360 + Intergenic -1040 AT2G03580 AT2G03580 F19B11.3|F19B11_3 F-box family protein-like protein protein-coding VNsp peak5241 2 1098734 1099538 + promoter-TSS (AT2G03610.1) 66 AT2G03610 AT2G03610 F19B11.6|F19B11_6 F-box family protein protein-coding common peak5243 2 1103491 1104883 + promoter-TSS (AT2G03620.2) -692 AT2G03620 MGT3 AtMGT3|AtMRS2-5|F19B11.7|F19B11_7|MRS2-5|magnesium transporter 3 magnesium transporter 3 protein-coding common peak5244 2 1106260 1106869 + exon (AT2G03640.5, exon 1 of 8) 227 AT2G03640 AT2G03640 F19B11.9|F19B11_9 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein protein-coding common peak5245 2 1113779 1114652 + promoter-TSS (AT2G03667.2) 88 AT2G03667 AT2G03667 - Asparagine synthase family protein protein-coding common peak5254 2 1166470 1167275 + promoter-TSS (AT2G03823.1) 243 AT2G03820 NMD3 AtNMD3|Nonsense-Mediated mRNA Decay 3|T18C20.2|T18C20_2 nonsense-mediated mRNA decay NMD3 family protein protein-coding common peak5255 2 1172901 1175387 + TTS (AT2G03840.1) 1052 AT2G03840 TET13 T18C20.4|T18C20_4|tetraspanin13 tetraspanin13 protein-coding common peak5260 2 1263893 1264880 + Intergenic 3569 AT2G03980 AT2G03980 F3C11.9|F3C11_9 GDSL-like Lipase/Acylhydrolase superfamily protein protein-coding common peak5072 2 258902 259277 + promoter-TSS (AT2G04015.1) 91 AT2G04015 AT2G04015 - ncRNA ncRNA common peak5262 2 1277740 1278154 + promoter-TSS (AT2G04025.2) -186 AT2G04025 RGF3 F3C11.1|F3C11_1|GLV7|GOLVEN 7|root meristem growth factor 3 root meristem growth factor protein-coding common peak5269 2 1444923 1446643 + exon (AT2G04220.1, exon 1 of 1) 698 AT2G04220 AT2G04220 T23O15.16 DUF868 family protein (DUF868) protein-coding common peak5271 2 1474284 1475268 + promoter-TSS (AT2G04270.1) 5 AT2G04270 RNEE/G RNAse E/G-like|RNE|RNase E|T23O15.10|T23O15_10 RNAse E/G-like protein protein-coding common peak5272 2 1481766 1482396 + promoter-TSS (AT2G04280.1) 8 AT2G04280 AT2G04280 T23O15.9|T23O15_9 calcium ion-binding protein protein-coding common peak5167 2 763971 764245 + TTS (AT2G02730.1) 532 AT2G04285 AT2G04285 - ncRNA ncRNA common peak5168 2 765478 765911 + TTS (AT2G02720.1) -1054 AT2G04285 AT2G04285 - ncRNA ncRNA common peak5275 2 1504305 1505321 + promoter-TSS (AT2G04305.1) -986 AT2G04305 AT2G04305 T23O15.7|T23O15_7 Magnesium transporter CorA-like family protein protein-coding VNsp peak5172 2 780376 780853 + promoter-TSS (AT2G02770.1) -331 AT2G04315 AT2G04315 - ncRNA ncRNA common peak5180 2 818941 819143 + exon (AT2G04345.1, exon 1 of 1) 114 AT2G04355 AT2G04355 - ncRNA ncRNA VNsp peak5277 2 1520692 1521177 + exon (AT2G04360.4, exon 1 of 6) 189 AT2G04360 AT2G04360 T23O15.18 transmembrane protein protein-coding common peak5281 2 1542447 1543507 + promoter-TSS (AT2G04450.1) -343 AT2G04450 NUDT6 ATNUDT6|ATNUDX6|Arabidopsis thaliana nucleoside diphosphate linked to some moiety X 6|Arabidopsis thaliana nucleoside diphosphate linked to some moiety X 6|NUDX6|T1O3.14|T1O3_14|nucleoside diphosphates linked to some moiety X 6|nucleoside diphosphates linked to some moiety X 6|nudix hydrolase homolog 6 nudix hydrolase homolog 6 protein-coding common peak5282 2 1560992 1562342 + Intergenic -2389 AT2G04495 AT2G04495 - transmembrane protein protein-coding common peak5289 2 1584318 1585014 + promoter-TSS (AT2G04540.1) 36 AT2G04540 AT2G04540 T1O3.5|T1O3_5 Beta-ketoacyl synthase protein-coding common peak5291 2 1593668 1594536 + promoter-TSS (AT2G04570.1) -486 AT2G04570 AT2G04570 T1O3.2|T1O3_2 GDSL-like Lipase/Acylhydrolase superfamily protein protein-coding common peak5292 2 1608417 1608851 + Intergenic -2028 AT2G04621 AT2G04621 - transmembrane protein protein-coding VNsp peak5295 2 1619414 1621644 + promoter-TSS (AT2G04630.1) -150 AT2G04630 NRPB6B F28I8.33|F28I8_33|NRPE6B RNA polymerase Rpb6 protein-coding common peak5310 2 1773007 1773549 + Intergenic -5422 AT2G04825 AT2G04825 - ncRNA ncRNA VNsp peak5301 2 1696125 1697694 + promoter-TSS (AT2G04840.1) -100 AT2G04840 AT2G04840 F28I8.12|F28I8_12 F-box only protein (DUF295) protein-coding common peak5323 2 1925939 1927025 + promoter-TSS (AT2G04885.1) -533 AT2G04885 AT2G04885 - ncRNA ncRNA common peak5328 2 2010822 2011242 + Intergenic -1655 AT2G04905 AT2G04905 - ncRNA ncRNA VNsp peak5308 2 1736029 1736395 + exon (AT2G04940.1, exon 12 of 12) -1741 AT2G04930 AT2G04930 F1O13.6|F1O13_6 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein protein-coding common peak5346 2 2211055 2211992 + TTS (AT2G05005.1) 1287 AT2G05005 AT2G05005 - ncRNA ncRNA VNsp peak5395 2 2853135 2853439 + Intergenic 4935 AT2G05035 AT2G05035 - ncRNA ncRNA VNsp peak5404 2 2938642 2939383 + Intergenic -7699 AT2G05075 AT2G05075 - ncRNA ncRNA VNsp peak5408 2 2980445 2981371 + TTS (AT2G07180.1) -1165 AT2G05125 AT2G05125 - ncRNA ncRNA common peak5315 2 1861568 1862480 + promoter-TSS (AT2G05160.3) 40 AT2G05160 AT2G05160 F5G3.6|F5G3_6 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein protein-coding common peak5316 2 1869587 1870864 + exon (AT2G05170.1, exon 1 of 6) 372 AT2G05170 VPS11 ATVPS11|F5G3.7|F5G3_7|vacuolar protein sorting 11 vacuolar protein sorting 11 protein-coding common peak5318 2 1895665 1897536 + promoter-TSS (AT2G05220.2) -550 AT2G05220 AT2G05220 F5G3.12|F5G3_12 Ribosomal S17 family protein protein-coding common peak5319 2 1912064 1912924 + TTS (AT2G05250.1) 4163 AT2G05250 AT2G05250 F5G3.15 DNAJ heat shock N-terminal domain-containing protein protein-coding VNsp peak5320 2 1917983 1919278 + intron (AT2G05260.2, intron 1 of 3) 341 AT2G05260 AT2G05260 F5G3.16|F5G3_16 alpha/beta-Hydrolases superfamily protein protein-coding common peak5325 2 1942067 1943132 + promoter-TSS (AT2G05335.1) 79 AT2G05335 SCRL15 SCR-like 15 SCR-like 15 protein-coding common peak5326 2 1959365 1960848 + promoter-TSS (AT2G05360.1) -803 AT2G05360 AT2G05360 F16J10.9|F16J10_9 F-box associated ubiquitination effector family protein protein-coding common peak5327 2 1968179 1969317 + TTS (AT2G05380.1) 1932 AT2G05380 GRP3S F16J10.7|F16J10_7|glycine-rich protein 3 short isoform glycine-rich protein 3 short protein-coding common peak5434 2 3535070 3535981 + Intergenic 3113 AT2G05445 AT2G05445 - ncRNA ncRNA common peak5449 2 3907800 3908506 + Intergenic -28611 AT2G05485 AT2G05485 - ncRNA ncRNA VNsp peak5450 2 3930447 3931325 + Intergenic -5878 AT2G05485 AT2G05485 - ncRNA ncRNA VNsp peak5451 2 3936059 3936554 + promoter-TSS (AT2G05485.1) -458 AT2G05485 AT2G05485 - ncRNA ncRNA VNsp peak5453 2 3985730 3986203 + Intergenic -26838 AT2G05505 AT2G05505 - ncRNA ncRNA VNsp peak5454 2 4001199 4001560 + Intergenic -11425 AT2G05505 AT2G05505 - ncRNA ncRNA VNsp peak5455 2 4004982 4007263 + Intergenic -6682 AT2G05505 AT2G05505 - ncRNA ncRNA VNsp peak5456 2 4012103 4013148 + promoter-TSS (AT2G05505.1) -179 AT2G05505 AT2G05505 - ncRNA ncRNA VNsp peak5330 2 2025825 2027339 + exon (AT2G05520.5, exon 2 of 3) 420 AT2G05520 GRP-3 ARABIDOPSIS GLYCINE RICH PROTEIN 3|ATGRP-3|ATGRP3|GLYCINE-RICH PROTEIN 3|GRP3|T20G20.13|T20G20_13|glycine-rich protein 3 glycine-rich protein 3 protein-coding common peak5459 2 4040309 4040612 + Intergenic 14590 AT2G05525 AT2G05525 - ncRNA ncRNA VNsp peak5331 2 2032928 2035170 + exon (AT2G05540.1, exon 2 of 2) 895 AT2G05540 AT2G05540 T20G20.11|T20G20_11 Glycine-rich protein family protein-coding common peak5332 2 2041219 2041933 + Intergenic 8422 AT2G05540 AT2G05540 T20G20.11|T20G20_11 Glycine-rich protein family protein-coding VNsp peak5460 2 4069927 4070246 + promoter-TSS (AT2G10455.1) 300 AT2G05545 AT2G05545 - ncRNA ncRNA common peak5466 2 4221216 4221484 + Intergenic 1680 AT2G05555 AT2G05555 - ncRNA ncRNA common peak5468 2 4223969 4224637 + TTS (AT2G05565.1) 664 AT2G05565 AT2G05565 - ncRNA ncRNA common peak5469 2 4226096 4226852 + Intergenic -1507 AT2G05565 AT2G05565 - ncRNA ncRNA common peak5470 2 4262155 4263067 + Intergenic -32404 AT2G05585 AT2G05585 - ncRNA ncRNA VNsp peak5335 2 2069632 2070566 + TTS (AT2G05590.2) -2547 AT2G05600 AT2G05600 T20G20.5|T20G20_5 F-box associated ubiquitination effector family protein protein-coding common peak5496 2 4793682 4793926 + Intergenic 1670 AT2G05625 AT2G05625 - ncRNA ncRNA VNsp peak5502 2 4865511 4865736 + Intergenic -5592 AT2G05665 AT2G05665 - ncRNA ncRNA VNsp peak5503 2 4870937 4872064 + exon (AT2G05675.1, exon 1 of 1) 178 AT2G05675 AT2G05675 - ncRNA ncRNA VNsp peak5507 2 4944486 4945360 + Intergenic 19295 AT2G05685 AT2G05685 - ncRNA ncRNA VNsp peak5512 2 5009179 5009964 + TTS (AT2G05695.1) 301 AT2G05695 AT2G05695 - ncRNA ncRNA common peak5513 2 5020811 5021395 + TTS (AT2G05705.1) 1096 AT2G05705 AT2G05705 - ncRNA ncRNA VNsp peak5514 2 5021754 5022249 + TTS (AT2G05705.1) 198 AT2G05705 AT2G05705 - ncRNA ncRNA VNsp peak5515 2 5022540 5022913 + promoter-TSS (AT2G05705.1) -527 AT2G05705 AT2G05705 - ncRNA ncRNA VNsp peak5339 2 2148045 2148216 + TTS (AT2G05720.1) 938 AT2G05720 AT2G05720 T3P4.4|T3P4_4 Transducin/WD40 repeat-like superfamily protein protein-coding common peak5516 2 5029222 5029820 + Intergenic 1709 AT2G05725 AT2G05725 - ncRNA ncRNA VNsp peak5340 2 2170559 2171536 + promoter-TSS (AT2G05752.1) 287 AT2G05755 AT2G05755 - Nodulin MtN21 /EamA-like transporter family protein protein-coding common peak5347 2 2214476 2216220 + TTS (AT2G05812.1) 458 AT2G05812 AT2G05812 - ncRNA ncRNA common peak5348 2 2216854 2217335 + promoter-TSS (AT2G05812.3) 20 AT2G05812 AT2G05812 - ncRNA ncRNA common peak5522 2 5081625 5082334 + TTS (AT2G05835.1) 257 AT2G05825 AT2G05825 - ncRNA ncRNA VNsp peak5349 2 2225763 2226089 + Intergenic -3613 AT2G05830 AT2G05830 5-METHYLTHIORIBOSE KINASE 1|MTI1|T6P5.3|T6P5_3 NagB/RpiA/CoA transferase-like superfamily protein protein-coding VNsp peak5523 2 5083850 5084585 + Intergenic -1699 AT2G05835 AT2G05835 - ncRNA ncRNA VNsp peak5351 2 2232072 2232277 + TTS (AT2G05830.1) -1845 AT2G05840 PAA2 20S proteasome subunit PAA2|T6P5.4|T6P5_4 20S proteasome subunit PAA2 protein-coding common peak5352 2 2234104 2234824 + exon (AT2G05840.3, exon 2 of 8) 372 AT2G05840 PAA2 20S proteasome subunit PAA2|T6P5.4|T6P5_4 20S proteasome subunit PAA2 protein-coding common peak5353 2 2242270 2245008 + exon (AT2G05850.1, exon 3 of 3) 1212 AT2G05850 scpl38 T6P5.5|T6P5_5|serine carboxypeptidase-like 38 serine carboxypeptidase-like 38 protein-coding VNsp peak5540 2 5403923 5404752 + Intergenic -7391 AT2G05865 AT2G05865 - ncRNA ncRNA VNsp peak5541 2 5410926 5411831 + promoter-TSS (AT2G05865.1) -350 AT2G05865 AT2G05865 - ncRNA ncRNA VNsp peak5552 2 5586560 5588431 + promoter-TSS (AT2G13422.1) -262 AT2G05895 AT2G05895 - ncRNA ncRNA common peak5354 2 2263936 2264608 + TTS (AT2G05915.1) 271 AT2G05914 AT2G05914 - ncRNA ncRNA VNsp peak5355 2 2272282 2273296 + promoter-TSS (AT2G05920.1) -337 AT2G05920 AT2G05920 T6P5.12|T6P5_12 Subtilase family protein protein-coding common peak5356 2 2294226 2294576 + Intergenic -4765 AT2G05940 RIPK RPM1-induced protein kinase|T6P5.14|T6P5_14 Protein kinase superfamily protein protein-coding VNsp peak5359 2 2324261 2325270 + exon (AT2G05990.1, exon 12 of 12) -1011 AT2G05995 AT2G05995 - ncRNA ncRNA common peak5361 2 2332166 2333150 + intron (AT2G06005.6, intron 1 of 13) 189 AT2G06005 FIP1 FRIGIDA interacting protein 1 FRIGIDA interacting protein 1 protein-coding common peak5362 2 2336216 2337291 + promoter-TSS (AT2G06010.1) 51 AT2G06010 ORG4 F5K7.23|F5K7_23|OBP3-responsive gene 4 OBP3-responsive protein 4 (ORG4) protein-coding common peak5364 2 2354595 2355683 + exon (AT2G06040.1, exon 1 of 6) 458 AT2G06040 AT2G06040 F5K7.20|F5K7_20 F-box/LRR protein protein-coding common peak5366 2 2385197 2385491 + Intergenic -9669 AT2G06105 AT2G06105 - aspartyl protease gag-polyprotein protein-coding VNsp peak5367 2 2386220 2387112 + Intergenic -8347 AT2G06105 AT2G06105 - aspartyl protease gag-polyprotein protein-coding VNsp peak5369 2 2423687 2424643 + Intergenic -2011 AT2G06200 GRF6 AtGRF6|F5K7.4|F5K7_4|growth-regulating factor 6 growth-regulating factor 6 protein-coding VNsp peak5370 2 2428877 2429181 + exon (AT2G06210.1, exon 24 of 24) 2790 AT2G06200 GRF6 AtGRF6|F5K7.4|F5K7_4|growth-regulating factor 6 growth-regulating factor 6 protein-coding common peak5371 2 2435590 2437175 + intron (AT2G06210.1, intron 1 of 23) 305 AT2G06210 ELF8 EARLY FLOWERING 8|F5K7.3|F5K7_3|VERNALIZATION INDEPENDENCE 6|VIP6 binding protein protein-coding common peak5373 2 2472753 2473421 + Intergenic 15514 AT2G06255 ELF4-L3 ELF4-like 3 ELF4-like 3 protein-coding VNsp peak5374 2 2474365 2474788 + Intergenic 17003 AT2G06255 ELF4-L3 ELF4-like 3 ELF4-like 3 protein-coding common peak5375 2 2484658 2484954 + Intergenic 27233 AT2G06255 ELF4-L3 ELF4-like 3 ELF4-like 3 protein-coding VNsp peak5376 2 2486554 2486840 + Intergenic 29124 AT2G06255 ELF4-L3 ELF4-like 3 ELF4-like 3 protein-coding VNsp peak5635 2 6371112 6371661 + TTS (AT2G14835.2) 386 AT2G06275 AT2G06275 - ncRNA ncRNA VNsp peak5643 2 6439417 6440030 + promoter-TSS (AT2G14945.1) -296 AT2G06305 AT2G06305 - ncRNA ncRNA VNsp peak5377 2 2537759 2537968 + promoter-TSS (AT2G06420.1) -880 AT2G06420 AT2G06420 F28N16.1|F28N16_1 En/Spm-like transposon, putative (DUF1985) protein-coding VNsp peak5694 2 6898697 6900144 + Intergenic -5114 AT2G06495 AT2G06495 - ncRNA ncRNA common peak5378 2 2579725 2580346 + TTS (AT2G06500.1) 3188 AT2G06500 AT2G06500 T12H3.5|T12H3_5 hAT family dimerization domain-containing protein protein-coding VNsp peak5699 2 6933264 6934580 + promoter-TSS (AT2G06525.1) -601 AT2G06525 AT2G06525 - ncRNA ncRNA common peak5381 2 2589705 2590650 + exon (AT2G06530.2, exon 1 of 5) 276 AT2G06530 VPS2.1 T12H3.8|T12H3_8|VPS2 SNF7 family protein protein-coding common peak5382 2 2600955 2601226 + promoter-TSS (AT2G06541.2) -764 AT2G06541 AT2G06541 - TTF-type zinc finger protein with HAT dimerization domain-containing protein protein-coding VNsp peak5383 2 2601487 2601697 + Intergenic -1266 AT2G06541 AT2G06541 - TTF-type zinc finger protein with HAT dimerization domain-containing protein protein-coding VNsp peak5384 2 2605840 2606109 + Intergenic -1047 AT2G06555 AT2G06555 - hypothetical protein protein-coding VNsp peak5385 2 2608755 2608968 + Intergenic -3934 AT2G06555 AT2G06555 - hypothetical protein protein-coding VNsp peak5386 2 2611042 2611232 + Intergenic -6210 AT2G06555 AT2G06555 - hypothetical protein protein-coding common peak5387 2 2690013 2690812 + Intergenic 15064 AT2G06675 AT2G06675 - hypothetical protein protein-coding VNsp peak5388 2 2723662 2724392 + Intergenic -18551 AT2G06675 AT2G06675 - hypothetical protein protein-coding VNsp peak5788 2 7442588 7443235 + exon (AT2G17110.1, exon 4 of 4) 2242 AT2G06815 AT2G06815 - ncRNA ncRNA common peak5389 2 2743526 2744609 + Intergenic -9376 AT2G06845 AT2G06845 - Beta-galactosidase related protein protein-coding VNsp peak5390 2 2746874 2747093 + Intergenic -6460 AT2G06845 AT2G06845 - Beta-galactosidase related protein protein-coding VNsp peak5391 2 2752889 2753986 + promoter-TSS (AT2G06845.1) -6 AT2G06845 AT2G06845 - Beta-galactosidase related protein protein-coding common peak5393 2 2822843 2823367 + Intergenic 7707 AT2G06908 AT2G06908 - hypothetical protein protein-coding VNsp peak5394 2 2823723 2823919 + Intergenic 8423 AT2G06908 AT2G06908 - hypothetical protein protein-coding VNsp peak5803 2 7525569 7526306 + promoter-TSS (AT2G06935.1) -563 AT2G06935 AT2G06935 - ncRNA ncRNA common peak5397 2 2870908 2871560 + promoter-TSS (AT2G06960.1) -882 AT2G06960 AT2G06960 T4E14.7|T4E14_7 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein protein-coding VNsp peak5398 2 2894047 2895402 + promoter-TSS (AT2G06990.1) -180 AT2G06990 HEN2 T4E14.10|T4E14_10|hua enhancer 2 RNA helicase, ATP-dependent, SK12/DOB1 protein protein-coding common peak5824 2 7633160 7634205 + TTS (AT2G17550.2) 468 AT2G06995 AT2G06995 - ncRNA ncRNA common peak5400 2 2907136 2908080 + TTS (AT2G07020.1) 3590 AT2G07020 AT2G07020 T4E14.13|T4E14_13 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein protein-coding VNsp peak5401 2 2916312 2917090 + exon (AT2G07040.1, exon 1 of 3) 285 AT2G07040 PRK2A ATPRK2A|AtPRK2|PRK2|T4E14.15|T4E14_15|pollen receptor like kinase 2 Leucine-rich repeat protein kinase family protein protein-coding VNsp peak5402 2 2924280 2925241 + exon (AT2G07050.1, exon 1 of 18) 400 AT2G07050 CAS1 CYCLOARTENOL SYNTHASE 1|T4E14.16|T4E14_16|cycloartenol synthase 1 cycloartenol synthase 1 protein-coding common peak5406 2 2974599 2975019 + promoter-TSS (AT2G07170.1) -216 AT2G07170 AT2G07170 T25N22.13|T25N22_13 ARM repeat superfamily protein protein-coding common peak5410 2 3012629 3013121 + promoter-TSS (AT2G07240.1) -542 AT2G07240 AT2G07240 T13E11.1|T13E11_1 cysteine-type peptidase protein-coding VNsp peak5411 2 3023337 3023611 + Intergenic -2924 AT2G07280 AT2G07280 T13E11.5|T13E11_5 hypothetical protein protein-coding VNsp peak5412 2 3028262 3029279 + promoter-TSS (AT2G07290.1) -791 AT2G07290 AT2G07290 T13E11.6|T13E11_6 hypothetical protein protein-coding common peak5413 2 3033906 3034230 + TTS (AT2G07310.1) 2319 AT2G07310 AT2G07310 T13E11.8|T13E11_8 hypothetical protein protein-coding VNsp peak5414 2 3045176 3045927 + promoter-TSS (AT2G07340.2) -8 AT2G07340 PFD1 PREFOLDIN 1|T13E11.11|T13E11_11 PREFOLDIN 1 protein-coding VNsp peak5417 2 3088412 3089024 + Intergenic 6032 AT2G07440 AT2G07440 T13E11.21|T13E11_21 two-component responsive regulator-related / response regulator protein-like protein protein-coding common peak5418 2 3094346 3094818 + intron (AT2G07440.1, intron 1 of 2) 168 AT2G07440 AT2G07440 T13E11.21|T13E11_21 two-component responsive regulator-related / response regulator protein-like protein protein-coding VNsp peak5419 2 3112837 3113511 + Intergenic -12497 AT2G07505 AT2G07505 F9A16.18 zinc ion binding protein protein-coding VNsp peak5420 2 3132101 3132414 + Intergenic 6586 AT2G07505 AT2G07505 F9A16.18 zinc ion binding protein protein-coding VNsp peak5421 2 3143304 3143984 + Intergenic 17973 AT2G07505 AT2G07505 F9A16.18 zinc ion binding protein protein-coding VNsp peak5435 2 3572514 3572814 + Intergenic -3801 AT2G07750 AT2G07750 T12J2.7|T12J2_7 DEA(D/H)-box RNA helicase family protein protein-coding VNsp peak5436 2 3599539 3600265 + Intergenic 6172 AT2G07810 AT2G07810 - hypothetical protein protein-coding VNsp peak6266 2 9983454 9983685 + Intergenic -1618 AT2G07905 AT2G07905 - ncRNA ncRNA common peak5437 2 3605750 3606123 + Intergenic -9050 AT2G07981 AT2G07981 - hypothetical protein protein-coding common peak5438 2 3606637 3607745 + Intergenic -7795 AT2G07981 AT2G07981 - hypothetical protein protein-coding common peak6642 2 12008809 12009210 + promoter-TSS (AT2G08240.1) -861 AT2G08240 AT2G08240 - ncRNA ncRNA common peak6857 2 13052130 13052932 + promoter-TSS (AT2G08410.1) -290 AT2G08410 AT2G08410 - ncRNA ncRNA common peak7295 2 15362115 15362322 + TTS (AT2G36650.1) -2081 AT2G08815 AT2G08815 - ncRNA ncRNA common peak7331 2 15566138 15566535 + promoter-TSS (AT2G08850.1) -20 AT2G08850 AT2G08850 - ncRNA ncRNA common peak5439 2 3614967 3623889 + intron (AT2G08986.1, intron 6 of 45) 1370 AT2G08986 AT2G08986 - hypothetical protein protein-coding common peak5440 2 3625458 3626420 + intron (AT2G08986.1, intron 43 of 45) 7881 AT2G08986 AT2G08986 - hypothetical protein protein-coding common peak5441 2 3627478 3627715 + Intergenic 9538 AT2G08986 AT2G08986 - hypothetical protein protein-coding common peak7501 2 16430163 16431599 + TTS (AT2G39340.1) -1841 AT2G09035 AT2G09035 - ncRNA ncRNA common peak7641 2 17139822 17143030 + promoter-TSS (AT2G09225.1) -410 AT2G09225 AT2G09225 - ncRNA ncRNA common peak5442 2 3669416 3672885 + exon (AT2G09795.3, exon 2 of 2) 1078 AT2G09795 AT2G09795 - ncRNA ncRNA common peak5443 2 3778522 3780134 + TTS (AT2G09970.1) 1363 AT2G09970 AT2G09970 F7B19.11|F7B19_11 DUF1677 family protein (DUF1677) protein-coding VNsp peak5444 2 3796287 3796775 + promoter-TSS (AT2G10020.1) -699 AT2G10020 AT2G10020 F7B19.16|F7B19_16 hypothetical protein protein-coding VNsp peak5445 2 3798473 3798873 + Intergenic 1443 AT2G10020 AT2G10020 F7B19.16|F7B19_16 hypothetical protein protein-coding VNsp peak5447 2 3820158 3820581 + Intergenic -17089 AT2G10025 AT2G10025 - hypothetical protein protein-coding VNsp peak5448 2 3852445 3854743 + Intergenic -50314 AT2G10025 AT2G10025 - hypothetical protein protein-coding VNsp peak5452 2 3962536 3962990 + Intergenic 24236 AT2G10260 AT2G10260 T15D9.11 Ulp1 protease family protein protein-coding VNsp peak5458 2 4022841 4023196 + Intergenic 2713 AT2G10450 AT2G10450 F12P23.4|F12P23_4 14-3-3 family protein protein-coding VNsp peak5462 2 4142258 4142612 + promoter-TSS (at2g10606) 38 at2g10606 common peak5471 2 4301072 4302073 + promoter-TSS (AT2G10921.1) -360 AT2G10921 AT2G10921 - ncRNA ncRNA common peak5475 2 4333107 4333930 + exon (AT2G10970.1, exon 1 of 1) 120 AT2G10970 AT2G10970 F15K19.4|F15K19_4 Plant invertase/pectin methylesterase inhibitor superfamily protein protein-coding VNsp peak5476 2 4347403 4348502 + promoter-TSS (AT2G11005.1) -4 AT2G11000 MAK10 ATMAK10|F15K19.7|F15K19_7|MAK10 homologue MAK10 homologue protein-coding common peak5477 2 4415734 4417002 + promoter-TSS (AT2G11035.1) -552 AT2G11035 AT2G11035 - reverse transcriptase zinc-binding protein protein-coding common peak5478 2 4470642 4470939 + Intergenic -6986 AT2G11215 AT2G11215 - hypothetical protein protein-coding common peak5481 2 4484089 4486394 + TTS (AT2G11271.1) 298 AT2G11271 AT2G11271 - hypothetical protein protein-coding common peak5484 2 4542783 4543539 + promoter-TSS (AT2G11405.1) -14 AT2G11405 AT2G11405 - transmembrane protein protein-coding VNsp peak5485 2 4568001 4568412 + Intergenic 22172 AT2G11462 AT2G11462 - hypothetical protein protein-coding VNsp peak5486 2 4591132 4591607 + promoter-TSS (AT2G11462.1) -991 AT2G11462 AT2G11462 - hypothetical protein protein-coding VNsp peak5487 2 4591869 4592807 + Intergenic -1960 AT2G11462 AT2G11462 - hypothetical protein protein-coding VNsp peak5488 2 4619143 4619936 + exon (AT2G11520.1, exon 3 of 8) 994 AT2G11520 CRCK3 F14P14.15|F14P14_15|calmodulin-binding receptor-like cytoplasmic kinase 3 calmodulin-binding receptor-like cytoplasmic kinase 3 protein-coding VNsp peak5489 2 4621877 4622633 + TTS (AT2G11520.1) 133 AT2G11522 AT2G11522 - hypothetical protein protein-coding VNsp peak5490 2 4649642 4650231 + Intergenic -8509 AT2G11620 AT2G11620 F14P14.5|F14P14_5 hypothetical protein protein-coding VNsp peak5491 2 4651613 4652727 + Intergenic -6275 AT2G11620 AT2G11620 F14P14.5|F14P14_5 hypothetical protein protein-coding VNsp peak5492 2 4733911 4734417 + Intergenic 6092 AT2G11778 AT2G11778 - transmembrane protein protein-coding VNsp peak5493 2 4745448 4746545 + exon (AT2G11810.3, exon 5 of 7) 1729 AT2G11810 MGDC ATMGD3|F7E22.4|F7E22_4|MGD3|MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 3|MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 3|MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE|monogalactosyldiacylglycerol synthase type C monogalactosyldiacylglycerol synthase type C protein-coding VNsp peak5494 2 4756367 4757399 + TTS (AT2G11815.1) 2037 AT2G11815 AT2G11815 - hypothetical protein protein-coding VNsp peak5495 2 4787576 4788392 + intron (AT2G11851.2, intron 2 of 2) 1923 AT2G11852 AT2G11852 - ncRNA ncRNA VNsp peak5499 2 4807754 4808190 + promoter-TSS (AT2G11910.1) -531 AT2G11910 AT2G11910 F23M2.7|F23M2_7 hypothetical protein protein-coding VNsp peak5500 2 4829022 4830034 + Intergenic -22087 AT2G11910 AT2G11910 F23M2.7|F23M2_7 hypothetical protein protein-coding VNsp peak5501 2 4834250 4834912 + Intergenic -27140 AT2G11910 AT2G11910 F23M2.7|F23M2_7 hypothetical protein protein-coding VNsp peak5504 2 4889011 4889426 + TTS (AT2G12170.1) 2206 AT2G12170 AT2G12170 F23M2.37 hypothetical protein protein-coding common peak5506 2 4923481 4923832 + TTS (AT2G12280.1) 845 AT2G12290 AT2G12290 T10J7.27|T10J7_27 hypothetical protein protein-coding VNsp peak5509 2 4995383 4997023 + Intergenic 12239 AT2G12400 AT2G12400 F24C20.8|F24C20_8 plasma membrane fusion protein protein-coding VNsp peak5510 2 5002388 5003233 + Intergenic 5632 AT2G12400 AT2G12400 F24C20.8|F24C20_8 plasma membrane fusion protein protein-coding VNsp peak5518 2 5057149 5057863 + Intergenic -1626 AT2G12465 LCR50 low-molecular-weight cysteine-rich 50 low-molecular-weight cysteine-rich 50 protein-coding VNsp peak5519 2 5059310 5059607 + Intergenic -3578 AT2G12465 LCR50 low-molecular-weight cysteine-rich 50 low-molecular-weight cysteine-rich 50 protein-coding VNsp peak5520 2 5067468 5069653 + TTS (AT2G12480.4) 358 AT2G12475 AT2G12475 - Defensin-like (DEFL) family protein protein-coding VNsp peak5524 2 5098640 5100279 + Intergenic -15345 AT2G12550 NUB1 T27D6.12|T27D6_12|homolog of human NUB1 ubiquitin-associated (UBA)/TS-N domain-containing protein protein-coding VNsp peak5526 2 5154097 5154295 + Intergenic 14989 AT2G12646 AT2G12646 - PLATZ transcription factor family protein protein-coding VNsp peak5527 2 5158788 5159040 + Intergenic 10271 AT2G12646 AT2G12646 - PLATZ transcription factor family protein protein-coding VNsp peak5528 2 5161490 5162042 + Intergenic 7419 AT2G12646 AT2G12646 - PLATZ transcription factor family protein protein-coding VNsp peak5529 2 5165246 5165544 + Intergenic 3790 AT2G12646 AT2G12646 - PLATZ transcription factor family protein protein-coding VNsp peak5532 2 5293039 5293231 + promoter-TSS (AT2G12900.1) -762 AT2G12900 AT2G12900 T18E17.2|bZIP33|basic leucine-zipper 33 Basic-leucine zipper (bZIP) transcription factor family protein protein-coding VNsp peak5533 2 5316478 5316711 + promoter-TSS (AT2G12935.1) -553 AT2G12935 AT2G12935 - hypothetical protein protein-coding VNsp peak5534 2 5320144 5320557 + Intergenic 2875 AT2G12940 UNE4 T19K21.9|T19K21_9|unfertilized embryo sac 4 Basic-leucine zipper (bZIP) transcription factor family protein protein-coding VNsp peak5536 2 5385492 5386521 + Intergenic -3588 AT2G13100 G3Pp5 AtG3Pp5|T17A11.9|T17A11_9|glycerol-3-phosphate permease 5 Major facilitator superfamily protein protein-coding VNsp peak5543 2 5425251 5425857 + Intergenic -8682 AT2G13126 AT2G13126 - hypothetical protein protein-coding VNsp peak5544 2 5435288 5436352 + Intergenic -1236 AT2G13150 AT2G13150 T17A11.14|T17A11_14|bZIP31|basic leucine-zipper 31 Basic-leucine zipper (bZIP) transcription factor family protein protein-coding VNsp peak5545 2 5457440 5458118 + Intergenic 20723 AT2G13150 AT2G13150 T17A11.14|T17A11_14|bZIP31|basic leucine-zipper 31 Basic-leucine zipper (bZIP) transcription factor family protein protein-coding VNsp peak5546 2 5464842 5465359 + Intergenic 28044 AT2G13150 AT2G13150 T17A11.14|T17A11_14|bZIP31|basic leucine-zipper 31 Basic-leucine zipper (bZIP) transcription factor family protein protein-coding VNsp peak5548 2 5511424 5513058 + exon (AT2G13290.2, exon 2 of 2) 669 AT2G13290 AT2G13290 F15O11.7|F15O11_7 beta-1,4-N-acetylglucosaminyltransferase family protein protein-coding common peak5549 2 5533902 5534888 + Intergenic 3556 AT2G13350 AT2G13350 F14O4.8|F14O4_8 Calcium-dependent lipid-binding (CaLB domain) family protein protein-coding VNsp peak5550 2 5537120 5538296 + exon (AT2G13350.1, exon 1 of 1) 243 AT2G13350 AT2G13350 F14O4.8|F14O4_8 Calcium-dependent lipid-binding (CaLB domain) family protein protein-coding VNsp peak5553 2 5608655 5608964 + TTS (AT2G13463.1) 1515 AT2G13463 AT2G13463 - hypothetical protein protein-coding VNsp peak5554 2 5609716 5610253 + exon (AT2G13463.1, exon 1 of 1) 340 AT2G13463 AT2G13463 - hypothetical protein protein-coding VNsp peak5557 2 5656138 5656900 + promoter-TSS (AT2G13570.1) -1 AT2G13570 NF-YB7 ''nuclear factor Y|T10F5.11|T10F5_11|nuclear factor Y|subunit B7|subunit B7'' nuclear factor Y, subunit B7 protein-coding common peak5558 2 5671162 5673000 + exon (AT2G13600.1, exon 1 of 1) 685 AT2G13600 SLO2 SLOW GROWTH 2|T10F5.14|T10F5_14 Pentatricopeptide repeat (PPR) superfamily protein protein-coding common peak5559 2 5680397 5681058 + TTS (AT2G13620.1) 2819 AT2G13620 CHX15 ATCHX15|CATION/H+ EXCHANGER 15|T10F5.16|T10F5_16|cation/hydrogen exchanger 15 cation/hydrogen exchanger 15 protein-coding common peak5563 2 5709068 5709788 + promoter-TSS (AT2G13690.1) -411 AT2G13690 AT2G13690 T10F5.21 PRLI-interacting factor protein-coding VNsp peak5564 2 5734367 5734558 + TTS (AT2G13760.1) 1343 AT2G13760 AT2G13760 F13J11.11|F13J11_11 no-apical-meristem-associated carboxy-terminal domain protein protein-coding VNsp peak5565 2 5735728 5736008 + promoter-TSS (AT2G13760.1) -63 AT2G13760 AT2G13760 F13J11.11|F13J11_11 no-apical-meristem-associated carboxy-terminal domain protein protein-coding common peak5566 2 5751398 5751659 + Intergenic -1575 AT2G13800 SERK5 ATSERK5|BAK8|BRI1- ASSOCIATED KINASE 8|F13J11.15|F13J11_15|SOMATIC EMBRYOGENESIS RECEPTOR LIKE KINASE 5|somatic embryogenesis receptor-like kinase 5 somatic embryogenesis receptor-like kinase 5 protein-coding VNsp peak5567 2 5762998 5763465 + Intergenic -5186 AT2G13810 ALD1 AGD2-like defense response protein 1|AtALD1|EDTS5|F17L24.14|eds two suppressor 5 AGD2-like defense response protein 1 protein-coding VNsp peak5568 2 5781911 5782193 + Intergenic -5710 AT2G13820 XYP2 AtXYP2|F17L24.13|F17L24_13|xylogen protein 2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein protein-coding VNsp peak5569 2 5788032 5788278 + TTS (AT2G13840.1) 2973 AT2G13840 AT2G13840 F17L24.11|F17L24_11 Polymerase/histidinol phosphatase-like protein protein-coding VNsp peak5570 2 5792277 5792699 + Intergenic -1360 AT2G13840 AT2G13840 F17L24.11|F17L24_11 Polymerase/histidinol phosphatase-like protein protein-coding VNsp peak5571 2 5799873 5800222 + TTS (AT2G13845.1) 1489 AT2G13845 AT2G13845 - hypothetical protein protein-coding VNsp peak5572 2 5823363 5823558 + Intergenic -6025 AT2G13895 AT2G13895 - Cysteine/Histidine-rich C1 domain family protein protein-coding VNsp peak5574 2 5828375 5829013 + promoter-TSS (AT2G13895.1) -791 AT2G13895 AT2G13895 - Cysteine/Histidine-rich C1 domain family protein protein-coding VNsp peak5578 2 5861170 5861866 + TTS (AT2G13960.2) 1214 AT2G13960 AT2G13960 F9B22.7|F9B22_7 Homeodomain-like superfamily protein protein-coding common peak5579 2 5864616 5865875 + promoter-TSS (AT2G13965.1) -631 AT2G13965 AT2G13965 - transmembrane protein protein-coding common peak5580 2 5874053 5874348 + TTS (AT2G13985.1) 1593 AT2G13985 AT2G13985 - transcriptional factor B3 family protein protein-coding VNsp peak5581 2 5874688 5875618 + intron (AT2G13985.1, intron 1 of 1) 640 AT2G13985 AT2G13985 - transcriptional factor B3 family protein protein-coding VNsp peak5582 2 5900039 5900472 + Intergenic -6165 AT2G14045 AT2G14045 - c-Myc-binding protein protein-coding VNsp peak5583 2 5905446 5906981 + promoter-TSS (AT2G14045.2) -207 AT2G14045 AT2G14045 - c-Myc-binding protein protein-coding common peak5584 2 5908247 5909804 + promoter-TSS (AT2G14050.1) -75 AT2G14050 MCM9 F9B22.16|F9B22_16|minichromosome maintenance 9 minichromosome maintenance 9 protein-coding common peak5585 2 5924279 5924753 + promoter-TSS (AT2G14080.2) -603 AT2G14080 AT2G14080 T22C12.1 Disease resistance protein (TIR-NBS-LRR class) family protein-coding common peak5586 2 5945477 5946155 + Intergenic -6007 AT2G14110 AT2G14110 T22C12.4|T22C12_4 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein protein-coding VNsp peak5589 2 5959437 5960277 + exon (AT2G14120.1, exon 1 of 20) 251 AT2G14120 DRP3B ADL2B|T22C12.5|T22C12_5|dynamin related protein dynamin related protein protein-coding common peak5594 2 6036608 6036928 + promoter-TSS (AT2G14255.1) -36 AT2G14255 AT2G14255 - Ankyrin repeat family protein with DHHC zinc finger domain-containing protein protein-coding common peak5595 2 6043118 6044892 + promoter-TSS (AT2G14260.2) -31 AT2G14260 PIP PROLINE IMINOPEPTIDASE|proline iminopeptidase proline iminopeptidase protein-coding common peak5599 2 6059391 6059675 + promoter-TSS (AT2G14290.1) -913 AT2G14290 AT2G14290 T1O16.12|T1O16_12 LL-diaminopimelate protein (DUF295) protein-coding VNsp peak5600 2 6102799 6104127 + Intergenic 1789 AT2G14378 AT2G14378 - egg cell-secreted-like protein (DUF1278) protein-coding VNsp peak5601 2 6139253 6139739 + Intergenic -3577 AT2G14440 AT2G14440 T13P21.18|T13P21_18 Leucine-rich repeat protein kinase family protein protein-coding VNsp peak5602 2 6141513 6142180 + Intergenic -1227 AT2G14440 AT2G14440 T13P21.18|T13P21_18 Leucine-rich repeat protein kinase family protein protein-coding VNsp peak5604 2 6163272 6164125 + Intergenic -3238 AT2G14500 AT2G14500 T13P21.12|T13P21_12 F-box family protein protein-coding common peak5607 2 6179580 6180109 + Intergenic -4749 AT2G14510 AT2G14510 T13P21.11|T13P21_11 Leucine-rich repeat protein kinase family protein protein-coding VNsp peak5609 2 6186740 6187764 + promoter-TSS (AT2G14530.1) -119 AT2G14530 TBL13 T13P21.9|T13P21_9|TRICHOME BIREFRINGENCE-LIKE 13 TRICHOME BIREFRINGENCE-LIKE 13 protein-coding common peak5624 2 6304974 6305572 + promoter-TSS (AT2G14720.1) -828 AT2G14720 VSR4 BP80-2;1|MTV4|T6B13.2|VACUOLAR SORTING RECEPTOR 2|VACUOLAR SORTING RECEPTOR 2;1|VSR-2|VSR2;1|binding protein of 80 kDa 2;1|vacuolar sorting receptor 4 vacuolar sorting receptor 4 protein-coding common peak5626 2 6313697 6316392 + intron (AT2G14750.1, intron 4 of 6) 1161 AT2G14750 APK ADENOSINE PHOSPHOSULFATE KINASE|ADENOSINE-5'-PHOSPHOSULFATE (APS) KINASE 1|AKN1|APK1|APS KINASE 1|APS kinase|ATAKN1|F26C24.11|F26C24_11 APS kinase protein-coding common peak5627 2 6321204 6321533 + TTS (AT2G14760.2) 1944 AT2G14760 AT2G14760 F26C24.10|F26C24_10 basic helix-loop-helix (bHLH) DNA-binding superfamily protein protein-coding common peak5632 2 6361518 6361928 + promoter-TSS (AT2G14825.1) -688 AT2G14825 AT2G14825 - histone deacetylase-like protein protein-coding common peak5637 2 6389491 6389959 + promoter-TSS (AT2G14860.1) -57 AT2G14860 AT2G14860 T26I20.2|T26I20_2 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein protein-coding common peak5642 2 6433085 6433861 + Intergenic 2002 AT2G14935 LCR40 low-molecular-weight cysteine-rich 40 low-molecular-weight cysteine-rich 40 protein-coding VNsp peak5646 2 6482214 6483693 + promoter-TSS (AT2G15000.2) -528 AT2G15000 AT2G15000 T15J14.4|T15J14_4 caspase-6 protein protein-coding common peak5647 2 6489951 6490297 + Intergenic 3388 AT2G15020 AT2G15020 T15J14.6|T15J14_6 hypothetical protein protein-coding VNsp peak5650 2 6516669 6517483 + Intergenic -1673 AT2G15050 LTP LTP7|T15J14.9|T15J14_9|lipid transfer protein|lipid transfer protein 7 lipid transfer protein protein-coding VNsp peak5652 2 6559271 6560213 + Intergenic -2574 AT2G15110 AT2G15110 T15J14.15|T15J14_15 hypothetical protein (Protein of unknown function, DUF601) protein-coding VNsp peak5658 2 6637434 6638329 + promoter-TSS (AT2G15270.2) 3 AT2G15270 AT2G15270 F27O10.8|F27O10_8 PRKR-interacting protein protein-coding common peak5660 2 6644074 6644499 + promoter-TSS (AT2G15290.1) -231 AT2G15290 TIC21 ATTIC21|AtTic21|CHLOROPLAST IMPORT APPARATUS 5|CIA5|F27O10.6|F27O10_6|PERMEASE IN CHLOROPLASTS 1|PIC1|TRANSLOCON AT INNER MEMBRANE OF CHLOROPLASTS 21|translocon at inner membrane of chloroplasts 21 translocon at inner membrane of chloroplasts 21 protein-coding common peak5661 2 6644801 6645953 + exon (AT2G15292.1, exon 1 of 1) 156 AT2G15292 AT2G15292 - ncRNA ncRNA common peak5666 2 6676655 6678279 + TTS (AT2G06415.1) 242 AT2G15340 AT2G15340 F26H6.14|F26H6_14 glycine-rich protein protein-coding VNsp peak5671 2 6733359 6734048 + exon (AT2G15430.2, exon 1 of 3) 149 AT2G15430 NRPB3 F26H6.5|F26H6_5|NRPD3|NRPE3A|RBP36A|RPB35.5A DNA-directed RNA polymerase family protein protein-coding common peak5673 2 6758423 6759152 + exon (AT2G15480.2, exon 1 of 3) 106 AT2G15480 UGT73B5 UDP-glucosyl transferase 73B5 UDP-glucosyl transferase 73B5 protein-coding common peak5677 2 6789062 6790237 + exon (AT2G15560.2, exon 2 of 3) 520 AT2G15560 AT2G15560 - Putative endonuclease or glycosyl hydrolase protein-coding common peak5684 2 6817175 6819290 + exon (AT2G15640.1, exon 1 of 1) 126 AT2G15640 AT2G15640 - F-box family protein protein-coding common peak5686 2 6830069 6830447 + promoter-TSS (AT2G15680.1) -737 AT2G15680 CML30 AtCML30|calmodulin-like 30 Calcium-binding EF-hand family protein protein-coding VNsp peak5687 2 6833143 6834061 + TTS (AT2G15695.1) 175 AT2G15690 AT2G15690 F9O13.34 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding common peak5689 2 6848212 6849916 + promoter-TSS (AT2G15730.2) -388 AT2G15730 AT2G15730 - P-loop containing nucleoside triphosphate hydrolases superfamily protein protein-coding common peak5690 2 6873113 6873680 + TTS (AT2G15780.1) -1151 AT2G15770 AT2G15770 F19G14.23|F19G14_23 Cupredoxin superfamily protein protein-coding common peak5692 2 6890469 6891627 + exon (AT2G15820.1, exon 1 of 2) 361 AT2G15820 OTP51 F19G14.18|F19G14_18|ORGANELLE TRANSCRIPT PROCESSING 51 endonuclease protein-coding common peak5695 2 6908770 6909925 + promoter-TSS (AT2G15860.3) 82 AT2G15860 AT2G15860 F19G14.14|F19G14_14 BAT2 domain protein protein-coding common peak5697 2 6919372 6920864 + TTS (AT2G15890.2) 201 AT2G15880 AT2G15880 F19G14.12|F19G14_12 Leucine-rich repeat (LRR) family protein protein-coding common peak5698 2 6926775 6927932 + promoter-TSS (AT2G06515.1) 329 AT2G15900 AT2G15900 F19G14.10|F19G14_10 phox domain-containing protein protein-coding common peak5700 2 6934897 6935724 + TTS (AT2G06525.1) 114 AT2G15910 AT2G15910 F19G14.9|F19G14_9 CSL zinc finger domain-containing protein protein-coding common peak5703 2 6961242 6962767 + Intergenic -1788 AT2G16005 AT2G16005 - MD-2-related lipid recognition domain-containing protein protein-coding VNsp peak5704 2 6969536 6969995 + promoter-TSS (AT2G16015.1) -587 AT2G16015 AT2G16015 - hypothetical protein protein-coding VNsp peak5705 2 6971325 6972215 + promoter-TSS (AT2G16016.1) -440 AT2G16016 AT2G16016 - transmembrane protein protein-coding VNsp peak5706 2 6974766 6975931 + promoter-TSS (AT2G16040.1) -341 AT2G16030 AT2G16030 F7H1.5|F7H1_5 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein protein-coding VNsp peak5707 2 6989086 6990115 + promoter-TSS (AT2G16090.5) -74 AT2G16090 ARI2 ARABIDOPSIS ARIADNE 12|ARABIDOPSIS ARIADNE 2|ARI12|ARIADNE 12|ARIADNE 2|ATARI12|ATARI2|F7H1.11|F7H1_11 RING/U-box superfamily protein protein-coding common peak5708 2 7005217 7006053 + Intergenic -2885 at2g16145 common peak5709 2 7007832 7008501 + promoter-TSS (ENSRNA049757836-T1) -354 at2g16145 common peak5712 2 7030008 7031749 + exon (AT2G16220.1, exon 1 of 1) 500 AT2G16220 AT2G16220 F7H1.24|F7H1_24 F-box and associated interaction domains-containing protein protein-coding common peak5720 2 7064323 7065170 + Intergenic -1379 AT2G16300 AT2G16300 F16F14.20|F16F14_20 F-box family protein protein-coding common peak5722 2 7081119 7081358 + TTS (AT2G16370.3) 3257 AT2G16370 THY-1 DIHYDROFOLATE REDUCTASE-THYMIDYLATE SYNTHASE|F16F14.13|F16F14_13|thymidylate synthase 1 thymidylate synthase 1 protein-coding common peak5723 2 7084036 7085187 + promoter-TSS (AT2G16370.3) -116 AT2G16370 THY-1 DIHYDROFOLATE REDUCTASE-THYMIDYLATE SYNTHASE|F16F14.13|F16F14_13|thymidylate synthase 1 thymidylate synthase 1 protein-coding common peak5726 2 7101220 7102369 + TTS (AT2G16390.1) 2134 AT2G16400 BLH7 BEL1-like homeodomain 7|F16F14.10|F16F14_10 BEL1-like homeodomain 7 protein-coding common peak5728 2 7108796 7109613 + promoter-TSS (AT2G16405.1) -115 AT2G16405 AT2G16405 - Transducin/WD40 repeat-like superfamily protein protein-coding common peak5732 2 7131682 7132343 + exon (AT2G16450.1, exon 1 of 1) 791 AT2G16450 AT2G16450 F16F14.5|F16F14_5 F-box and associated interaction domains-containing protein protein-coding common peak5735 2 7150303 7153453 + exon (AT2G16500.1, exon 1 of 1) 1552 AT2G16500 ADC1 ARGDC|ARGDC1|ARGININE DECARBOXYLASE|F1P15.12|F1P15_12|SPE1|arginine decarboxylase 1 arginine decarboxylase 1 protein-coding common peak5736 2 7160365 7161349 + promoter-TSS (AT2G16510.1) 77 AT2G16510 AT2G16510 F1P15.11|F1P15_11 ATPase, F0/V0 complex, subunit C protein protein-coding common peak5739 2 7190742 7191371 + promoter-TSS (AT2G06695.1) 119 AT2G16586 AT2G16586 - transmembrane protein protein-coding common peak5747 2 7242238 7242950 + Intergenic -1906 AT2G16700 ADF5 ACTIN DEPOLYMERIZING FACTOR 5|ATADF5|T24I21.11|T24I21_11|actin depolymerizing factor 5 actin depolymerizing factor 5 protein-coding VNsp peak5759 2 7278275 7278747 + promoter-TSS (AT2G16770.1) -855 AT2G16770 bZIP23 T24I21.18|T24I21_18 Basic-leucine zipper (bZIP) transcription factor family protein protein-coding common peak5766 2 7314076 7314762 + exon (AT2G16880.1, exon 1 of 1) 157 AT2G16880 AT2G16880 F12A24.6|F12A24_6 Pentatricopeptide repeat (PPR) superfamily protein protein-coding common peak5768 2 7332263 7332956 + TTS (AT2G06795.1) 888 AT2G16910 AMS ABORTED MICROSPORES|F12A24.9|F12A24_9 basic helix-loop-helix (bHLH) DNA-binding superfamily protein protein-coding common peak5773 2 7362306 7364125 + Intergenic -1468 AT2G16960 AT2G16960 F12A24.14|F12A24_14 ARM repeat superfamily protein protein-coding common peak5774 2 7370911 7371474 + intron (AT2G16970.3, intron 2 of 12) 1690 AT2G16970 MEE15 F12A24.15|F12A24_15|maternal effect embryo arrest 15 Major facilitator superfamily protein protein-coding common peak5784 2 7421008 7422109 + promoter-TSS (AT2G17060.1) -778 AT2G17060 AT2G17060 F6P23.21|F6P23_21 Disease resistance protein (TIR-NBS-LRR class) family protein-coding VNsp peak5786 2 7428863 7429765 + Intergenic 2625 AT2G17070 AT2G17070 F6P23.22|F6P23_22 hypothetical protein (DUF241) protein-coding VNsp peak5791 2 7462197 7463517 + promoter-TSS (AT2G17140.1) 48 AT2G17140 AT2G17140 F6P23.26|F6P23_26 Pentatricopeptide repeat (PPR) superfamily protein protein-coding common peak5792 2 7471669 7472870 + promoter-TSS (AT2G17150.3) -485 AT2G17160 AT2G17160 T23A1.2|T23A1_2 Interleukin-1 receptor-associated kinase 4 protein protein-coding common peak5793 2 7476757 7478054 + TTS (AT2G17190.1) 278 AT2G17180 DAZ1 DUO1-ACTIVATED ZINC FINGER 1|T23A1.4|T23A1_4 C2H2-like zinc finger protein protein-coding common peak5804 2 7535555 7535933 + exon (AT2G17320.2, exon 1 of 11) 260 AT2G17320 AT2G17320 F5J6.8|F5J6_8 pantothenate kinase protein-coding common peak5819 2 7609139 7609870 + TTS (AT2G17500.1) 2599 AT2G17500 AT2G17500 MJB20.6|MJB20_6|PILS5|PIN-LIKES 5 Auxin efflux carrier family protein protein-coding common peak5820 2 7615944 7616362 + promoter-TSS (AT2G17510.1) -153 AT2G17510 EMB2763 AtRRP44A|EMBRYO DEFECTIVE 2763|MJB20.7|MJB20_7|RRP44A|Rrp44 homolog A ribonuclease II family protein protein-coding common peak5823 2 7625374 7626732 + promoter-TSS (AT2G17530.1) -272 AT2G17530 AT2G17530 MJB20.9|MJB20_9 Protein kinase superfamily protein protein-coding common peak5832 2 7684170 7684377 + TTS (AT2G17690.1) 903 AT2G17695 AT2G17695 - outer envelope protein protein-coding common peak5836 2 7692293 7693374 + promoter-TSS (AT2G17710.1) 437 AT2G17705 AT2G17705 - methionine-S-oxide reductase protein-coding common peak5837 2 7721009 7721961 + Intergenic -1340 AT2G17770 BZIP27 ATBZIP27|FD PARALOG|FDP|T17A5.15|T17A5_15|basic region/leucine zipper motif 27 basic region/leucine zipper motif 27 protein-coding common peak5861 2 7856721 7857513 + promoter-TSS (AT2G18080.1) -22 AT2G18080 EDA2 T27K22.5|T27K22_5|embryo sac development arrest 2 Serine carboxypeptidase S28 family protein protein-coding common peak5866 2 7890173 7891855 + Intergenic -2136 AT2G18140 AT2G18140 F8D23.8|F8D23_8 Peroxidase superfamily protein protein-coding common peak5876 2 7941485 7942141 + promoter-TSS (AT2G18260.1) 35 AT2G18260 SYP112 ATSYP112|T30D6.23|T30D6_23|syntaxin of plants 112 syntaxin of plants 112 protein-coding common peak5883 2 7987636 7988843 + promoter-TSS (AT2G18390.1) 74 AT2G18390 TTN5 ARF-LIKE 2|ARL2|ATARLC1|HAL|HALLIMASCH|T30D6.10|T30D6_10|TITAN 5 ADP-ribosylation factor family protein protein-coding common peak5890 2 8006920 8008226 + exon (AT2G18470.3, exon 3 of 10) 553 AT2G18470 PERK4 AtPERK4|T30D6.2|proline-rich extensin-like receptor kinase 4|roline-rich extensin-like receptor kinase 4 roline-rich extensin-like receptor kinase 4 protein-coding VNsp peak5891 2 8016519 8016875 + Intergenic -3759 AT2G18490 AT2G18490 F24H14.16|F24H14_16 C2H2-like zinc finger protein protein-coding VNsp peak5896 2 8036691 8037370 + Intergenic -1618 AT2G18520 AT2G18520 F24H14.13|F24H14_13 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding common peak5903 2 8074828 8075728 + promoter-TSS (AT2G18600.2) -269 AT2G18600 AT2G18600 F24H14.5|F24H14_5 Ubiquitin-conjugating enzyme family protein protein-coding common peak5906 2 8092236 8094310 + promoter-TSS (AT2G18670.1) 53 AT2G18670 AT2G18670 MSF3.5|MSF3_5 RING/U-box superfamily protein protein-coding common peak5907 2 8094790 8095813 + promoter-TSS (AT2G18685.1) -274 AT2G18685 AT2G18685 - hypothetical protein protein-coding VNsp peak5910 2 8106194 8109410 + Intergenic -1096 AT2G18700 TPS11 ATTPS11|ATTPSB|MSF3.8|MSF3_8|TREHALOSE-6-PHOSPHATE SYNTHASE 11|trehalose phosphatase/synthase 11 trehalose phosphatase/synthase 11 protein-coding common peak5921 2 8157679 8158687 + promoter-TSS (AT2G18840.1) 77 AT2G18840 AT2G18840 MSF3.22|MSF3_22|YIP4a|YPT/RAB GTPase Interacting Protein 4a Integral membrane Yip1 family protein protein-coding common peak5924 2 8178765 8179707 + TTS (AT2G18880.1) -4402 AT2G18890 AT2G18890 F19F24.9|F19F24_9 Protein kinase superfamily protein protein-coding common peak5928 2 8202688 8203243 + TTS (AT2G18938.1) 749 AT2G18938 AT2G18938 - transmembrane protein protein-coding common peak5937 2 8246199 8246518 + TTS (AT2G19010.2) 198 AT2G19020 RALFL10 T20K24.3|T20K24_3|ralf-like 10 ralf-like 10 protein-coding common peak5941 2 8268432 8269525 + promoter-TSS (AT2G19090.1) -562 AT2G19090 AT2G19090 T20K24.10|T20K24_10 DUF630 family protein (DUF630 and DUF632) protein-coding common peak5947 2 8305500 8305890 + intron (AT2G19150.1, intron 2 of 4) 595 AT2G19150 AT2G19150 T20K24.17|T20K24_17 Pectin lyase-like superfamily protein protein-coding common peak5955 2 8342308 8343001 + promoter-TSS (AT2G19220.1) -493 AT2G19220 AT2G19220 F27F23.2|F27F23_2 Myb/SANT-like DNA-binding domain protein protein-coding common peak5956 2 8352290 8353454 + promoter-TSS (AT2G19240.1) -310 AT2G19240 AT2G19240 F27F23.4|F27F23_4 Ypt/Rab-GAP domain of gyp1p superfamily protein protein-coding common peak5961 2 8383638 8384287 + TTS (AT2G19360.1) 155 AT2G19380 AT2G19380 F27F23.27 RNA recognition motif (RRM)-containing protein protein-coding common peak5962 2 8385910 8387397 + promoter-TSS (AT2G19385.1) -280 AT2G19385 AT2G19385 - zinc ion binding protein protein-coding common peak5968 2 8417653 8418533 + TTS (AT2G19440.2) 1830 AT2G19440 AT2G19440 F27F23.28 O-Glycosyl hydrolases family 17 protein protein-coding common peak5974 2 8438291 8439052 + intron (AT2G19480.1, intron 1 of 11) 215 AT2G19480 NAP1;2 F3P11.8|F3P11_8|NFA02|NFA2|NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 02|NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 2|nucleosome assembly protein 1;2 nucleosome assembly protein 1;2 protein-coding common peak5982 2 8483980 8485152 + TTS (AT2G19600.1) 626 AT2G19610 AT2G19610 F3P11.21|F3P11_21 RING/U-box superfamily protein protein-coding common peak5984 2 8490802 8491841 + promoter-TSS (AT2G19630.1) -67 AT2G19640 ASHR2 ASH1-related 2|ASH1-related protein 2|F3P11.24|F3P11_24|SDG39|SET DOMAIN PROTEIN 39 ASH1-related protein 2 protein-coding common peak6001 2 8566938 8567180 + Intergenic -1510 AT2G19850 AT2G19850 F6F22.12|F6F22_12 transcription repressor protein-coding common peak6007 2 8591350 8591856 + TTS (AT2G19900.1) 1650 AT2G19893 AT2G19893 - Defensin-like (DEFL) family protein protein-coding VNsp peak6009 2 8606582 8607680 + promoter-TSS (AT2G19920.1) -79 AT2G19920 AT2G19920 F6F22.5|F6F22_5 RNA-dependent RNA polymerase family protein protein-coding common peak6011 2 8615576 8616088 + TTS (AT2G19950.1) 2798 AT2G19940 AT2G19940 F6F22.3|F6F22_3 Putative N-acetyl-gamma-glutamyl-phosphate reductase protein-coding common peak6013 2 8627038 8628742 + exon (AT2G19980.1, exon 2 of 2) 330 AT2G19980 AT2G19980 T2G17.22|T2G17_22 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein protein-coding common peak6015 2 8636774 8638093 + promoter-TSS (AT2G20000.2) -133 AT2G20000 HBT CDC27b|HOBBIT|T2G17.20|T2G17_20 CDC27 family protein protein-coding common peak6040 2 8766282 8767592 + promoter-TSS (AT2G20320.2) -50 AT2G20320 AT2G20320 F11A3.13|F11A3_13 DENN (AEX-3) domain-containing protein protein-coding common peak6041 2 8772388 8774516 + TTS (AT2G20320.2) 2216 AT2G20330 AT2G20330 F11A3.12|F11A3_12 Transducin/WD40 repeat-like superfamily protein protein-coding VNsp peak6046 2 8798201 8799293 + promoter-TSS (AT2G20400.2) -294 AT2G20400 AT2G20400 F11A3.5|F11A3_5 myb-like HTH transcriptional regulator family protein protein-coding common peak6065 2 8911141 8912457 + TTS (AT2G20670.1) 1948 AT2G20670 AT2G20670 F23N11.1 sugar phosphate exchanger, putative (DUF506) protein-coding common peak6075 2 8957084 8957710 + promoter-TSS (AT2G20810.1) -396 AT2G20810 GAUT10 F5H14.44|LGT4|galacturonosyltransferase 10 galacturonosyltransferase 10 protein-coding VNsp peak6090 2 9046766 9049364 + promoter-TSS (AT2G21090.1) -127 AT2G21105 AT2G21105 - hypothetical protein protein-coding common peak6091 2 9054490 9057012 + promoter-TSS (AT2G21120.1) 730 AT2G21130 AT2G21130 F26H11.11|F26H11_11 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein protein-coding common peak6093 2 9067723 9068675 + promoter-TSS (AT2G21160.1) -53 AT2G21160 AT2G21160 F26H11.8|F26H11_8 Translocon-associated protein (TRAP), alpha subunit protein-coding common peak6113 2 9204824 9205930 + promoter-TSS (AT2G21480.1) 94 AT2G21480 AT2G21480 F3K23.24|F3K23_24 Malectin/receptor-like protein kinase family protein protein-coding common peak6130 2 9286365 9286570 + exon (AT2G21770.1, exon 6 of 13) 2076 AT2G21770 CESA9 CESA09|F7D8.9|F7D8_9|cellulose synthase A9 cellulose synthase A9 protein-coding common peak6131 2 9290324 9291282 + promoter-TSS (AT2G21780.1) 98 AT2G21780 AT2G21780 F7D8.10|F7D8_10 hypothetical protein protein-coding common peak6136 2 9322471 9323433 + promoter-TSS (AT2G21870.1) -85 AT2G21870 MGP1 F7D8.19|F7D8_19|MALE GAMETOPHYTE DEFECTIVE 1 MALE GAMETOPHYTE DEFECTIVE 1 protein-coding common peak6154 2 9427741 9429389 + promoter-TSS (AT2G22180.1) -178 AT2G22180 AT2G22180 T26C19.16|T26C19_16 hydroxyproline-rich glycoprotein family protein protein-coding common peak6175 2 9530192 9530972 + TTS (AT2G22440.1) 217 AT2G22450 RIBA2 AtRIBA2|F14M13.15|F14M13_15|homolog of ribA 2 riboflavin biosynthesis protein protein-coding common peak6178 2 9556392 9556690 + promoter-TSS (AT2G22490.2) -374 AT2G22490 CYCD2;1 ATCYCD2;1|Cyclin D2;1|F14M13.11|F14M13_11 Cyclin D2;1 protein-coding VNsp peak6200 2 9651840 9652450 + promoter-TSS (AT2G22690.2) -571 AT2G22690 AT2G22690 T9I22.13|T9I22_13 zinc ion binding protein protein-coding common peak6201 2 9656797 9657642 + promoter-TSS (AT2G22720.6) -120 AT2G22720 AT2G22720 T9I22.16|T9I22_16 SPT2 chromatin protein protein-coding common peak6202 2 9658190 9659900 + intron (AT2G22720.4, intron 5 of 8) 1558 AT2G22720 AT2G22720 T9I22.16|T9I22_16 SPT2 chromatin protein protein-coding common peak6228 2 9788571 9788954 + intron (AT2G22990.1, intron 9 of 13) 2321 AT2G22990 SNG1 MALATE SINAPOYLTRANSFERASE|SCPL8|SERINE CARBOXYPEPTIDASE-LIKE 8|T20K9.18|sinapoylglucose 1 sinapoylglucose 1 protein-coding common peak6234 2 9803049 9803771 + promoter-TSS (AT2G23020.1) -122 AT2G23020 AT2G23020 22741.TRNA-MET-1 tRNA tRNA common peak6243 2 9853001 9853991 + promoter-TSS (AT2G23148.1) -113 AT2G23148 AT2G23148 - Plant self-incompatibility protein S1 family protein-coding VNsp peak6247 2 9864750 9865479 + exon (AT2G23170.1, exon 3 of 3) 1448 AT2G23170 GH3.3 T20D16.20|T20D16_20 Auxin-responsive GH3 family protein protein-coding common peak6249 2 9880908 9882440 + exon (AT2G23200.1, exon 1 of 1) 1723 AT2G23210 AT2G23210 T20D16.16|T20D16_16 UDP-Glycosyltransferase superfamily protein protein-coding common peak6250 2 9905464 9906855 + promoter-TSS (AT2G23290.1) -127 AT2G23290 MYB70 AtMYB70|T20D16.8|T20D16_8|myb domain protein 70 myb domain protein 70 protein-coding common peak6262 2 9963259 9964072 + promoter-TSS (AT2G23390.1) -19 AT2G23390 AT2G23390 F26B6.4|F26B6_4 acyl-CoA protein-coding common peak6264 2 9977516 9978713 + promoter-TSS (AT2G23430.1) -24 AT2G23430 ICK1 CYCLIN-DEPENDENT KINASE INHIBITOR PROTEIN|F26B6.8|F26B6_8|KIP-RELATED PROTEIN 1|KRP1 Cyclin-dependent kinase inhibitor family protein protein-coding common peak6270 2 10011148 10013366 + intron (AT2G23510.1, intron 2 of 2) 1276 AT2G23510 SDT F26B6.16|F26B6_16|spermidine disinapoyl acyltransferase spermidine disinapoyl acyltransferase protein-coding common peak6275 2 10059258 10061850 + exon (AT2G23660.2, exon 3 of 3) -1037 AT2G23650 AT2G23650 22095.TRNA-MET-1|27126.TRNA-MET-1 tRNA tRNA common peak6277 2 10073883 10075636 + Intergenic 2702 AT2G23690 AT2G23690 F27L4.13|F27L4_13 HTH-type transcriptional regulator protein-coding common peak6286 2 10124409 10125744 + promoter-TSS (AT2G23780.1) -407 AT2G23780 AT2G23780 F27L4.4|F27L4_4 RING/U-box superfamily protein protein-coding common peak6292 2 10169399 10170927 + promoter-TSS (AT2G23890.3) -413 AT2G23890 AT2G23890 T29E15.9|T29E15_9 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase protein-coding common peak6319 2 10336999 10338855 + promoter-TSS (AT2G24290.1) -103 AT2G24285 AT2G24285 - zinc finger, C3HC4 type (RING finger) family protein protein-coding common peak6321 2 10346116 10347088 + TTS (AT2G24330.1) 227 AT2G24320 AT2G24320 T28I24.5|T28I24_5 alpha/beta-Hydrolases superfamily protein protein-coding VNsp peak6329 2 10392902 10394867 + promoter-TSS (AT2G24460.1) 92 AT2G24450 FLA3 FASCICLIN-like arabinogalactan protein 3 precursor|T28I24.18|T28I24_18 FASCICLIN-like arabinogalactan protein 3 precursor protein-coding VNsp peak6341 2 10462756 10463465 + TTS (AT2G24620.1) 200 AT2G24617 AT2G24617 - hypothetical protein protein-coding common peak6349 2 10502245 10502793 + promoter-TSS (AT2G24692.1) 621 AT2G24690 AT2G24690 F25P17.1|F25P17_1 Transcriptional factor B3 family protein protein-coding common peak6356 2 10527248 10528170 + promoter-TSS (AT2G24735.1) -355 AT2G24735 AT2G24735 - ncRNA ncRNA common peak6362 2 10566497 10567622 + promoter-TSS (AT2G24780.1) 161 AT2G24790 COL3 ATCOL3|B-box domain protein 4|BBX4|CONSTANS-like 3|F27A10.10 CONSTANS-like 3 protein-coding common peak6363 2 10574241 10575539 + promoter-TSS (AT2G24820.1) -52 AT2G24820 TIC55-II AtTic55|F27C12.26|F27C12_26|Tic55|translocon at the inner envelope membrane of chloroplasts 55|translocon at the inner envelope membrane of chloroplasts 55-II translocon at the inner envelope membrane of chloroplasts 55-II protein-coding common peak6364 2 10578840 10579977 + promoter-TSS (AT2G24830.1) -178 AT2G24830 AT2G24830 F27C12.25|F27C12_25 zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein protein-coding common peak6368 2 10609095 10609979 + exon (AT2G24940.1, exon 1 of 1) 120 AT2G24940 MAPR2 AtMAPR2|F27C12.14|F27C12_14|membrane-associated progesterone binding protein 2 membrane-associated progesterone binding protein 2 protein-coding common peak6372 2 10621008 10621686 + promoter-TSS (AT2G24970.1) -40 AT2G24970 AT2G24970 F27C12.11|F27C12_11 spindle/kinetochore-associated protein protein-coding common peak6377 2 10660174 10660903 + promoter-TSS (AT2G25050.1) 13 AT2G25055 AT2G25055 - hypothetical protein protein-coding common peak6383 2 10680678 10682171 + exon (AT2G25100.1, exon 3 of 8) 574 AT2G25100 AT2G25100 F13D4.60|F13D4_60 Polynucleotidyl transferase, ribonuclease H-like superfamily protein protein-coding common peak6397 2 10747060 10747631 + exon (AT2G25230.1, exon 3 of 3) 1122 AT2G25230 MYB100 AtMYB100|T22F11.18|T22F11_18|myb domain protein 100 myb domain protein 100 protein-coding common peak6398 2 10753353 10755114 + promoter-TSS (AT2G25240.1) 631 AT2G25250 AT2G25250 T22F11.16|T22F11_16 serine/arginine repetitive matrix-like protein protein-coding common peak6399 2 10764729 10765698 + promoter-TSS (AT2G25280.1) -403 AT2G25280 AT2G25280 T22F11.13|T22F11_13 AmmeMemoRadiSam system protein B protein-coding common peak6432 2 10905080 10905554 + promoter-TSS (AT2G25625.1) -30 AT2G25620 DBP1 AtDBP1|DNA-binding protein phosphatase 1 DNA-binding protein phosphatase 1 protein-coding common peak6438 2 10972389 10973266 + promoter-TSS (AT2G25730.1) -98 AT2G25730 AT2G25730 F3N11.1|F3N11_1 zinc finger FYVE domain protein protein-coding common peak6441 2 10988399 10989551 + promoter-TSS (AT2G25760.2) -51 AT2G25760 AT2G25760 AT2G25750|F17H15.21|F17H15_21 Protein kinase family protein protein-coding common peak6450 2 11036653 11037482 + promoter-TSS (AT2G25880.1) -121 AT2G25880 AUR2 AtAUR2|F17H15.9|F17H15_9|ataurora2 ataurora2 protein-coding common peak6454 2 11051805 11053240 + promoter-TSS (AT2G25910.1) -447 AT2G25910 AT2G25910 F17H15.6|F17H15_6 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein protein-coding common peak6471 2 11123422 11123832 + intron (AT2G26120.1, intron 1 of 1) 197 AT2G26120 AT2G26120 T19L18.7|T19L18_7 glycine-rich protein protein-coding VNsp peak6473 2 11129751 11130319 + promoter-TSS (AT2G26135.1) -84 AT2G26135 AT2G26135 - RING/U-box protein with C6HC-type zinc finger protein-coding common peak6479 2 11163365 11165012 + promoter-TSS (AT2G26230.1) -387 AT2G26230 AT2G26230 T1D16.13|T1D16_13|UOX|urate oxidase uricase / urate oxidase / nodulin 35 protein-coding common peak6489 2 11220065 11221610 + promoter-TSS (AT2G26350.4) 129 AT2G26355 AT2G26355 - ncRNA ncRNA common peak6492 2 11227627 11228461 + promoter-TSS (AT2G26380.1) 79 AT2G26380 AT2G26380 T9J22.5|T9J22_5 Leucine-rich repeat (LRR) family protein protein-coding common peak6496 2 11241064 11241663 + exon (AT2G26420.3, exon 1 of 6) 876 AT2G26420 PIP5K3 1-phosphatidylinositol-4-phosphate 5-kinase 3|T9J22.9|T9J22_9 1-phosphatidylinositol-4-phosphate 5-kinase 3 protein-coding common peak6497 2 11245251 11247106 + promoter-TSS (AT2G26440.1) -120 AT2G26430 RCY1 ARGININE-RICH CYCLIN 1|ATRCY1|MOS12|T9J22.10|T9J22_10|arginine-rich cyclin 1|modifier of snc1 12 arginine-rich cyclin 1 protein-coding common peak6499 2 11250900 11251881 + exon (AT2G26450.1, exon 1 of 3) 350 AT2G26450 AT2G26450 T9J22.12|T9J22_12 Plant invertase/pectin methylesterase inhibitor superfamily protein-coding VNsp peak6502 2 11253615 11254536 + TTS (AT2G26460.1) 3035 AT2G26450 AT2G26450 T9J22.12|T9J22_12 Plant invertase/pectin methylesterase inhibitor superfamily protein-coding common peak6506 2 11265430 11266166 + TTS (AT2G26480.1) 1909 AT2G26480 UGT76D1 T9J22.15|T9J22_15|UDP-glucosyl transferase 76D1 UDP-glucosyl transferase 76D1 protein-coding common peak6507 2 11267048 11268336 + promoter-TSS (AT2G26490.1) -165 AT2G26490 AT2G26490 T9J22.16|T9J22_16 Transducin/WD40 repeat-like superfamily protein protein-coding VNsp peak6517 2 11318513 11319844 + TTS (AT2G26600.1) 407 AT2G26610 AT2G26610 T9J22.28|T9J22_28 Transducin family protein / WD-40 repeat family protein protein-coding common peak6535 2 11409173 11410519 + promoter-TSS (AT2G26780.2) 18 AT2G26780 AT2G26780 F18A8.15|F18A8_15 ARM repeat superfamily protein protein-coding common peak6559 2 11580351 11581530 + promoter-TSS (AT2G27110.1) -123 AT2G27110 FRS3 FAR1-related sequence 3|T20P8.16|T20P8_16 FAR1-related sequence 3 protein-coding common peak6561 2 11587030 11587277 + intron (AT2G27120.3, intron 22 of 48) 5939 AT2G27120 TIL2 POL2B|T20P8.17|T20P8_17|TILTED 2 DNA polymerase epsilon catalytic subunit protein-coding VNsp peak6562 2 11588679 11588936 + exon (AT2G27120.2, exon 29 of 49) -6269 AT2G27130 AT2G27130 T20P8.18|T20P8_18 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein protein-coding VNsp peak6566 2 11636540 11638156 + TTS (AT2G27210.2) 2189 AT2G27220 BLH5 BEL1-like homeodomain 5|T22O13.1|T22O13_1 BEL1-like homeodomain 5 protein-coding common peak6576 2 11683514 11685662 + exon (AT2G27310.1, exon 1 of 1) 754 AT2G27310 AT2G27310 F12K2.11|F12K2_11 F-box family protein protein-coding common peak6577 2 11691101 11691559 + Intergenic -1326 AT2G27315 AT2G27315 - egg cell-secreted-like protein (DUF1278) protein-coding common peak6580 2 11704024 11704823 + promoter-TSS (AT2G27350.4) -120 AT2G27350 OTLD1 F12K2.7|F12K2_7|otubain-like deubiquitinase 1 OTU-like cysteine protease family protein protein-coding common peak6585 2 11739480 11740774 + promoter-TSS (AT2G27460.1) -375 AT2G27460 AT2G27460 F10A12.14|F10A12_14 sec23/sec24 transport family protein protein-coding common peak6586 2 11746030 11747044 + promoter-TSS (AT2G27470.1) -82 AT2G27470 NF-YB11 ''nuclear factor Y|F10A12.15|F10A12_15|nuclear factor Y|subunit B11|subunit B11'' nuclear factor Y, subunit B11 protein-coding common peak6597 2 11786374 11786909 + promoter-TSS (AT2G27610.1) -108 AT2G27610 AT2G27610 F15K20.29|F15K20_29 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding common peak6641 2 12001424 12002445 + exon (AT2G28150.1, exon 5 of 6) 1546 AT2G28150 AT2G28150 F24D13.6|F24D13_6 UPSTREAM OF FLC protein (DUF966) protein-coding common peak6643 2 12009810 12010393 + promoter-TSS (AT2G28170.1) -145 AT2G28170 ATCHX7 CATION/H+ EXCHANGER 7|CHX7|F24D13.4|F24D13_4 Cation/hydrogen exchanger family protein protein-coding VNsp peak6653 2 12077872 12079691 + Intergenic -2242 AT2G28305 LOG1 ATLOG1|LONELY GUY 1|T1B3.18 Putative lysine decarboxylase family protein protein-coding common peak6656 2 12094392 12095136 + exon (AT2G28320.1, exon 1 of 21) 143 AT2G28320 AT2G28320 T1B3.16|T1B3_16 Pleckstrin homology (PH) and lipid-binding START domains-containing protein protein-coding common peak6660 2 12113492 12116425 + exon (AT2G28350.1, exon 1 of 4) 896 AT2G28350 ARF10 T1B3.13|T1B3_13|auxin response factor 10 auxin response factor 10 protein-coding common peak6665 2 12143037 12143677 + exon (AT2G28390.1, exon 1 of 14) 308 AT2G28390 AT2G28390 MON1|MONENSIN SENSITIVITY1|T1B3.9|T1B3_9 SAND family protein protein-coding common peak6673 2 12176031 12176857 + TTS (AT2G28480.1) 2054 AT2G28480 AT2G28480 T17D12.4|T17D12_4 RNA-binding CRS1 / YhbY (CRM) domain protein protein-coding common peak6700 2 12284437 12284787 + exon (AT2G28640.1, exon 2 of 2) 2230 AT2G28640 EXO70H5 ATEXO70H5|T8O18.7|T8O18_7|exocyst subunit exo70 family protein H5 exocyst subunit exo70 family protein H5 protein-coding common peak6701 2 12285867 12287161 + exon (AT2G28640.1, exon 1 of 2) 328 AT2G28640 EXO70H5 ATEXO70H5|T8O18.7|T8O18_7|exocyst subunit exo70 family protein H5 exocyst subunit exo70 family protein H5 protein-coding VNsp peak6718 2 12370627 12371731 + promoter-TSS (AT2G28830.1) -759 AT2G28830 PUB12 AtPUB12|F8N16.12|F8N16_12|PLANT U-BOX 12 armadillo/beta-catenin repeat protein protein-coding common peak6721 2 12377495 12377964 + promoter-TSS (AT2G28840.1) -543 AT2G28840 XBAT31 F8N16.13|F8N16_13|XB3 ortholog 1 in Arabidopsis thaliana hypothetical protein protein-coding common peak6727 2 12398310 12399154 + TTS (AT2G28880.1) -3715 AT2G28870 AT2G28870 F8N16.16|F8N16_16 cyclin-dependent kinase inhibitor SMR1-like protein protein-coding common peak6730 2 12409730 12409956 + Intergenic -1604 AT2G28890 PLL4 F8N16.18|F8N16_18|PROTEIN PHOSPHATASE 2C|poltergeist like 4 poltergeist like 4 protein-coding common peak6731 2 12416877 12418784 + promoter-TSS (AT2G28910.2) -187 AT2G28920 AT2G28920 F8N16.21|F8N16_21 RING/U-box superfamily protein protein-coding common peak6756 2 12559860 12560978 + exon (AT2G29210.2, exon 9 of 12) 2368 AT2G29210 AT2G29210 F16P2.41|F16P2_41 splicing factor PWI domain-containing protein protein-coding common peak6764 2 12616433 12617225 + exon (AT2G29410.1, exon 2 of 2) 451 AT2G29410 MTPB1 ATMTPB1|F16P2.21|F16P2_21|metal tolerance protein B1 metal tolerance protein B1 protein-coding VNsp peak6785 2 12733737 12734120 + promoter-TSS (AT2G29840.1) 55 AT2G29840 AT2G29840 T27A16.6|T27A16_6 RING/U-box superfamily protein protein-coding VNsp peak6788 2 12741924 12742597 + promoter-TSS (AT2G29880.1) -276 AT2G29880 AT2G29880 T27A16.36 Myb/SANT-like DNA-binding domain protein protein-coding common peak6789 2 12743000 12744272 + promoter-TSS (AT2G29890.5) -480 AT2G29890 VLN1 ATVLN1|F6K5.2|F6K5_2|villin 1|villin-like 1 villin-like 1 protein-coding common peak6793 2 12766630 12768181 + promoter-TSS (AT2G29950.1) -180 AT2G29950 ELF4-L1 ELF4-like 1|F23F1.13|F23F1_13 ELF4-like 1 protein-coding common peak6803 2 12813094 12815014 + promoter-TSS (AT2G30020.1) -217 AT2G30020 AT2G30020 AP2C1|F23F1.6|F23F1_6 Protein phosphatase 2C family protein protein-coding common peak6804 2 12815316 12816447 + exon (AT2G30020.1, exon 2 of 2) 1610 AT2G30020 AT2G30020 AP2C1|F23F1.6|F23F1_6 Protein phosphatase 2C family protein protein-coding common peak6812 2 12856937 12857842 + intron (AT2G30110.1, intron 1 of 6) 338 AT2G30110 UBA1 ATUBA1|MODIFIER OF SNC1 5|MOS5|T27E13.15|T27E13_15|ubiquitin-activating enzyme 1 ubiquitin-activating enzyme 1 protein-coding common peak6818 2 12881405 12881743 + promoter-TSS (AT2G30180.1) -8 AT2G30170 PBCP PHOTOSYSTEM II CORE PHOSPHATASE|T27E13.9|T27E13_9 Protein phosphatase 2C family protein protein-coding common peak6832 2 12935403 12935933 + exon (AT2G30350.1, exon 1 of 3) 105 AT2G30350 AT2G30350 T9D9.16|T9D9_16 Excinuclease ABC, C subunit, N-terminal protein-coding common peak6835 2 12949960 12950422 + TTS (AT2G30390.2) 394 AT2G30385 AT2G30385 - F-box/LRR protein protein-coding common peak6846 2 13001580 13002849 + TTS (AT2G30520.3) 360 AT2G30505 AT2G30505 - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family protein-coding common peak6862 2 13075893 13077162 + exon (AT2G30690.1, exon 2 of 3) 491 AT2G30690 AT2G30690 T11J7.8|T11J7_8 lateral signaling target-like protein (Protein of unknown function, DUF593) protein-coding common peak6870 2 13126258 13127532 + promoter-TSS (AT2G30800.1) -82 AT2G30800 HVT1 ATVT-1|helicase in vascular tissue and tapetum helicase in vascular tissue and tapetum protein-coding common peak6876 2 13159731 13160827 + promoter-TSS (AT2G30920.1) -338 AT2G30920 COQ3 ATCOQ3|EMB3002|F7F1.13|F7F1_13|coenzyme Q 3|embryo defective 3002 coenzyme Q 3 protein-coding common peak6891 2 13266046 13266864 + promoter-TSS (AT2G31130.7) -9 AT2G31130 AT2G31130 T16B12.6|T16B12_6 hypothetical protein protein-coding common peak6919 2 13401219 13402001 + promoter-TSS (AT2G31440.1) -404 AT2G31440 AT2G31440 T28P16.7|T28P16_7 gamma-secretase subunit APH1-like protein protein-coding common peak6920 2 13404031 13404546 + promoter-TSS (AT2G31450.2) -66 AT2G31450 ATNTH1 T28P16.6|T28P16_6 DNA glycosylase superfamily protein protein-coding common peak6925 2 13415582 13415828 + TTS (AT2G31510.3) 1967 AT2G31500 CPK24 T28P16.1|calcium-dependent protein kinase 24 calcium-dependent protein kinase 24 protein-coding common peak6926 2 13416859 13417253 + TTS (AT2G31500.1) 3318 AT2G31500 CPK24 T28P16.1|calcium-dependent protein kinase 24 calcium-dependent protein kinase 24 protein-coding VNsp peak6937 2 13481012 13481526 + TTS (AT2G31710.1) 759 AT2G31700 AT2G31700 T9H9.22|T9H9_22 transmembrane protein protein-coding VNsp peak6947 2 13531386 13532279 + TTS (AT2G31830.2) 2066 AT2G31820 AT2G31820 F20M17.14|F20M17_14 Ankyrin repeat family protein protein-coding VNsp peak6948 2 13532646 13532860 + TTS (AT2G31830.2) 2987 AT2G31820 AT2G31820 F20M17.14|F20M17_14 Ankyrin repeat family protein protein-coding VNsp peak6949 2 13536723 13537856 + TTS (AT2G31840.2) 452 AT2G31830 5PTase14 F20M17.13|F20M17_13|inositol-polyphosphate 5-phosphatase 14 endonuclease/exonuclease/phosphatase family protein protein-coding VNsp peak6951 2 13559596 13561196 + promoter-TSS (AT2G31902.1) -58 AT2G31902 AT2G31902 - ncRNA ncRNA common peak6956 2 13599657 13600944 + promoter-TSS (AT2G31970.1) -131 AT2G31970 RAD50 ATRAD50|DNA REPAIR-RECOMBINATION PROTEIN|F22D22.28|F22D22_28 DNA repair-recombination protein (RAD50) protein-coding common peak6969 2 13659714 13661045 + exon (AT2G32150.2, exon 7 of 7) 1375 AT2G32150 AT2G32150 F22D22.10|F22D22_10 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein protein-coding common peak6994 2 13793215 13793698 + TTS (AT2G32487.1) 1569 AT2G32487 AT2G32487 - hypothetical protein protein-coding common peak6997 2 13807251 13808788 + promoter-TSS (AT2G32520.1) -309 AT2G32520 AT2G32520 T26B15.8|T26B15_8 alpha/beta-Hydrolases superfamily protein protein-coding common peak7003 2 13846121 13846455 + TTS (AT2G32640.1) 1508 AT2G32630 AT2G32630 T26B15.19|T26B15_19 Pentatricopeptide repeat (PPR-like) superfamily protein protein-coding common peak7010 2 13890019 13892155 + promoter-TSS (AT2G32760.2) -450 AT2G32760 AT2G32760 F24L7.10|F24L7_10 UV radiation resistance-associated protein protein-coding common peak7016 2 13917986 13919240 + TTS (AT2G32810.1) 2173 AT2G32800 AP4.3A F24L7.6|F24L7_6|L-type lectin receptor kinase S.2|LecRK-S.2 protein kinase family protein protein-coding common peak7017 2 13927283 13929176 + exon (AT2G32830.1, exon 3 of 3) 1534 AT2G32830 PHT1;5 F24L7.2|PHOSPHATE TRANSPORTER 5|PHT5|phosphate transporter 1;5 phosphate transporter 1;5 protein-coding common peak7032 2 14010515 14011523 + exon (AT2G33010.1, exon 1 of 5) 181 AT2G33010 AT2G33010 T21L14.2 Ubiquitin-associated (UBA) protein protein-coding common peak7035 2 14035801 14038255 + exon (AT2G33100.1, exon 6 of 6) -1067 AT2G33090 AT2G33090 F25I18.17|F25I18_17 Transcription elongation factor (TFIIS) family protein protein-coding common peak7036 2 14039182 14040304 + exon (AT2G33100.1, exon 1 of 6) 414 AT2G33100 CSLD1 ATCSLD1|CELLULOSE-SYNTHASE LIKE D1|F25I18.16|F25I18_16|cellulose synthase-like D1 cellulose synthase-like D1 protein-coding VNsp peak7065 2 14173152 14176262 + TTS (AT2G33450.1) 1128 AT2G33450 PRPL28 F4P9.22|F4P9_22|plastid ribosomal protein L28 Ribosomal L28 family protein-coding common peak7097 2 14336491 14338734 + TTS (AT2G08645.1) 773 AT2G33870 ArRABA1h RAB GTPase homolog A1H|T1B8.16|T1B8_16 RAB GTPase homolog A1H protein-coding common peak7103 2 14376828 14377892 + promoter-TSS (AT2G34030.1) 38 AT2G34030 AT2G34030 T14G11.15|T14G11_15 Calcium-binding EF-hand family protein protein-coding common peak7112 2 14412573 14414821 + promoter-TSS (AT2G34100.2) -208 AT2G34100 AT2G34100 T14G11.22|T14G11_22 nonsense-mediated mRNA decay-like protein protein-coding common peak7132 2 14526505 14527573 + TTS (AT2G34450.2) 368 AT2G34440 AGL29 AGAMOUS-like 29|F13P17.1 AGAMOUS-like 29 protein-coding common peak7148 2 14596352 14596728 + promoter-TSS (AT2G34655.1) -25 AT2G34655 AT2G34655 - hypothetical protein protein-coding VNsp peak7183 2 14770945 14771695 + exon (AT2G35050.1, exon 2 of 9) 2397 AT2G35050 AT2G35050 F19I3.28|F19I3_28 kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein protein-coding common peak7203 2 14868461 14869816 + promoter-TSS (AT2G35320.1) -257 AT2G35320 EYA ATEYA|EYES ABSENT homolog|T4C15.1|T4C15_1 eyes absent-like protein protein-coding common peak7214 2 14920175 14922005 + promoter-TSS (AT2G35510.1) -383 AT2G35520 DAD2 DEFENDER AGAINST CELL DEATH 2|T32F12.10|T32F12_10 Defender against death (DAD family) protein protein-coding common peak7218 2 14946931 14947618 + TTS (AT2G35610.1) 1233 AT2G35605 AT2G35605 - SWIB/MDM2 domain superfamily protein protein-coding common peak7233 2 15033244 15035769 + TTS (AT2G35765.1) 969 AT2G35765 AT2G35765 - hypothetical protein protein-coding common peak7248 2 15119212 15119570 + promoter-TSS (AT2G36010.1) -125 AT2G36010 E2F3 ATE2FA|E2F TRANSCRIPTION FACTOR-3 E2F3|E2F transcription factor 3|F11F19.8|F11F19_8 E2F transcription factor 3 protein-coding common peak7266 2 15192482 15193334 + TTS (AT2G36230.1) 428 AT2G36220 AT2G36220 F2H17.17|F2H17_17 hypothetical protein protein-coding common peak7276 2 15241370 15242202 + promoter-TSS (AT2G36355.4) -537 AT2G36355 AT2G36355 - RAB6-interacting golgin (DUF662) protein-coding common peak7336 2 15592104 15594988 + TTS (AT2G37120.1) 994 AT2G37110 AT2G37110 T2N18.13|T2N18_13 PLAC8 family protein protein-coding common peak7386 2 15884082 15884612 + promoter-TSS (AT2G37950.1) -334 AT2G37950 AT2G37950 T8P21.14|T8P21_14 RING/FYVE/PHD zinc finger superfamily protein protein-coding common peak7409 2 15998933 15999996 + promoter-TSS (AT2G38185.3) -462 AT2G38185 APD1 ABERRANT POLLEN DEVELOPMENT 1 RING/U-box superfamily protein protein-coding common peak7428 2 16086980 16087209 + TTS (AT2G38400.2) 3180 AT2G38410 AT2G38410 T19C21.10|T19C21_10 ENTH/VHS/GAT family protein protein-coding VNsp peak7438 2 16124506 16126548 + TTS (AT2G38510.1) 1542 AT2G38510 AT2G38510 T6A23.29|T6A23_29 MATE efflux family protein protein-coding common peak7447 2 16165408 16166295 + promoter-TSS (AT2G38660.1) 25 AT2G38650 GAUT7 JS33|LGT7|LIKE GLYCOSYL TRANSFERASE 7|T6A23.15|T6A23_15|galacturonosyltransferase 7 galacturonosyltransferase 7 protein-coding common peak7448 2 16168198 16169407 + promoter-TSS (AT2G38670.1) 90 AT2G38670 PECT1 T6A23.13|T6A23_13|phosphorylethanolamine cytidylyltransferase 1 phosphorylethanolamine cytidylyltransferase 1 protein-coding common peak7449 2 16173730 16174230 + TTS (AT2G38680.1) 2192 AT2G38680 AT2G38680 T6A23.12|T6A23_12 5'-nucleotidase / magnesium ion binding protein protein-coding common peak7453 2 16184451 16184763 + promoter-TSS (AT2G38700.1) -533 AT2G38700 MVD1 ATMVD1|MEVALONATE DIPHOSPHATE DECARBOXYLASE|T6A23.10|T6A23_10|mevalonate diphosphate decarboxylase 1 mevalonate diphosphate decarboxylase 1 protein-coding common peak7461 2 16231972 16232227 + TTS (AT2G38860.2) 3135 AT2G38860 YLS5 DJ-1e|DJ1E|T7F6.3|T7F6_3 Class I glutamine amidotransferase-like superfamily protein protein-coding common peak7463 2 16242905 16244917 + TTS (AT2G38890.4) 620 AT2G38905 AT2G38905 - Low temperature and salt responsive protein family protein-coding common peak7468 2 16258403 16260788 + exon (AT2G38940.1, exon 2 of 2) -1208 AT2G38950 AT2G38950 T7F6.12|T7F6_12 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein protein-coding common peak7471 2 16278105 16279529 + Intergenic -3142 AT2G38995 AT2G38995 - O-acyltransferase (WSD1-like) family protein protein-coding common peak7480 2 16317156 16317781 + promoter-TSS (AT2G39090.1) 30 AT2G39100 AT2G39100 T7F6.27|T7F6_27 RING/U-box superfamily protein protein-coding common peak7481 2 16321387 16322256 + promoter-TSS (AT2G09000.1) 100 AT2G39120 WTF9 T7F6.29|T7F6_29|what's this factor 9 Ubiquitin carboxyl-terminal hydrolase family protein protein-coding common peak7483 2 16329872 16330651 + promoter-TSS (AT2G39140.2) 78 AT2G39140 SVR1 AT2G39150|PDE328|PIGMENT DEFECTIVE 328|SUPPRESSOR OF VARIEGATION 1|T16B24.22|T16B24_22 pseudouridine synthase family protein protein-coding common peak7491 2 16370631 16370829 + Intergenic -2160 AT2G39210 AT2G39210 T16B24.15|T16B24_15 Major facilitator superfamily protein protein-coding common peak7497 2 16399197 16401100 + promoter-TSS (AT2G39260.1) 179 AT2G39270 AT2G39270 - P-loop containing nucleoside triphosphate hydrolases superfamily protein protein-coding common peak7510 2 16466336 16467557 + promoter-TSS (AT2G39435.2) -5 AT2G39435 TRM18 TON1 Recruiting Motif 18 Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein protein-coding common peak7517 2 16518204 16518936 + promoter-TSS (AT2G39590.1) 65 AT2G39600 AT2G39600 31456.TRNA-CYS-1 tRNA tRNA common peak7530 2 16590158 16591829 + promoter-TSS (AT2G39780.2) -124 AT2G39780 RNS2 T5I7.8|T5I7_8|ribonuclease 2 ribonuclease 2 protein-coding common peak7531 2 16602738 16603706 + promoter-TSS (AT2G39800.3) 97 AT2G39800 P5CS1 ATP5CS|T5I7.10|T5I7_10|delta1-pyrroline-5-carboxylate synthase 1 delta1-pyrroline-5-carboxylate synthase 1 protein-coding common peak7542 2 16657760 16659189 + promoter-TSS (AT2G39900.1) 6 AT2G39900 WLIM2a T28M21.6|T28M21_6 GATA type zinc finger transcription factor family protein protein-coding VNsp peak7558 2 16751268 16752919 + TTS (AT2G40113.1) 532 AT2G40116 AT2G40116 - Phosphoinositide-specific phospholipase C family protein protein-coding common peak7588 2 16877144 16877754 + exon (AT2G40420.1, exon 1 of 5) 305 AT2G40420 AT2G40420 T3G21.19|T3G21_19 Transmembrane amino acid transporter family protein protein-coding common peak7599 2 16933579 16935261 + promoter-TSS (AT2G40550.1) -201 AT2G40550 ETG1 E2F target gene 1|T2P4.10|T2P4_10 E2F target protein 1 (ETG1) protein-coding common peak7602 2 16956422 16958337 + promoter-TSS (AT2G40630.2) -196 AT2G40620 AT2G40620 T2P4.3|T2P4_3|bZIP18|basic leucine-zipper 18 Basic-leucine zipper (bZIP) transcription factor family protein protein-coding common peak7603 2 16962966 16963761 + promoter-TSS (AT2G40640.2) -148 AT2G40640 AT2G40640 T7D17.18|T7D17_18 RING/U-box superfamily protein protein-coding common peak7606 2 16973798 16974188 + promoter-TSS (AT2G40690.2) 1 AT2G40690 GLY1 SFD1|SUPPRESSOR OF FATTY ACID DESATURASE DEFICIENCY 1|T7D17.13|T7D17_13 NAD-dependent glycerol-3-phosphate dehydrogenase family protein protein-coding common peak7607 2 16976284 16976833 + promoter-TSS (AT2G40700.1) -78 AT2G40700 AT2G40700 T7D17.12|T7D17_12 P-loop containing nucleoside triphosphate hydrolases superfamily protein protein-coding common peak7617 2 17024028 17024806 + promoter-TSS (AT2G40790.1) -116 AT2G40790 CXXS2 ATCXXS2|C-terminal cysteine residue is changed to a serine 2|T7D17.3|T7D17_3 C-terminal cysteine residue is changed to a serine 2 protein-coding VNsp peak7623 2 17050521 17051919 + TTS (AT2G40840.1) 135 AT2G40850 PI4K GAMMA 1 ATPI4K GAMMA 1|T20B5.5|T20B5_5|phosphoinositide 4-kinase gamma 1 phosphoinositide 4-kinase gamma 1 protein-coding common peak7648 2 17173283 17174240 + TTS (AT2G41200.1) 387 AT2G41210 PIP5K5 T3K9.2|T3K9_2|phosphatidylinositol- 4-phosphate 5-kinase 5 phosphatidylinositol- 4-phosphate 5-kinase 5 protein-coding common peak7650 2 17180595 17181297 + exon (AT2G41220.1, exon 8 of 33) 3407 AT2G41220 GLU2 F13H10.23|F13H10_23|GLUTAMATE SYNTHASE PRECURSOR|glutamate synthase 2 glutamate synthase 2 protein-coding common peak7668 2 17277259 17278022 + promoter-TSS (AT2G41450.2) -508 AT2G41450 AT2G41450 T26J13.4|T26J13_4 N-acetyltransferase protein-coding common peak7674 2 17307094 17307686 + promoter-TSS (AT2G41500.1) 36 AT2G41500 LIS EMB2776|LACHESIS|T26J13.9|T26J13_9 WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein protein-coding common peak7678 2 17336764 17338423 + promoter-TSS (AT2G41560.4) -101 AT2G41560 ACA4 ''autoinhibited Ca(2+)-ATPase|T32G6.8|T32G6_8|autoinhibited Ca(2+)-ATPase|isoform 4|isoform 4'' autoinhibited Ca(2+)-ATPase protein-coding common peak7681 2 17354957 17355831 + promoter-TSS (AT2G41620.1) -291 AT2G41620 AT2G41620 T32G6.14|T32G6_14 Nucleoporin interacting component (Nup93/Nic96-like) family protein protein-coding VNsp peak7704 2 17469598 17470113 + promoter-TSS (AT2G41860.2) -69 AT2G41860 CPK14 T11A7.4|T11A7_4|calcium-dependent protein kinase 14 calcium-dependent protein kinase 14 protein-coding common peak7711 2 17501093 17502687 + exon (AT2G41930.1, exon 1 of 1) 261 AT2G41930 AT2G41930 T6D20.17|T6D20_17 Protein kinase superfamily protein protein-coding common peak7714 2 17518949 17519799 + promoter-TSS (AT2G41960.1) -71 AT2G41960 AT2G41960 T6D20.15|T6D20_15 hypothetical protein protein-coding common peak7718 2 17530218 17530914 + promoter-TSS (AT2G42000.2) -123 AT2G42000 AtMT4a Arabidopsis thaliana metallothionein 4a|T6D20.11|T6D20_11 plant EC metallothionein family protein protein-coding common peak7746 2 17675085 17675672 + promoter-TSS (AT2G42450.1) -278 AT2G42450 AT2G42450 MHK10.17|MHK10_17 alpha/beta-Hydrolases superfamily protein protein-coding common peak7749 2 17704409 17705489 + promoter-TSS (AT2G42520.3) 208 AT2G42520 AT2G42520 F14N22.21|F14N22_21 P-loop containing nucleoside triphosphate hydrolases superfamily protein protein-coding common peak7750 2 17712121 17713387 + promoter-TSS (AT2G42540.2) -424 AT2G42540 COR15A AtCOR15A|COR15|F14N22.19|F14N22_19|cold-regulated 15a cold-regulated 15a protein-coding common peak7772 2 17843835 17845097 + promoter-TSS (AT2G42880.1) -86 AT2G42880 MPK20 ATMPK20|F7D19.12|F7D19_12|MAP kinase 20 MAP kinase 20 protein-coding common peak7774 2 17854843 17856421 + promoter-TSS (AT2G42910.1) -617 AT2G42910 AT2G42910 F7D19.9|F7D19_9 Phosphoribosyltransferase family protein protein-coding common peak7777 2 17866868 17868032 + TTS (AT2G42960.2) 122 AT2G42955 AT2G42955 F7D19.3 F-box/LRR protein protein-coding common peak7789 2 17927184 17929511 + intron (AT2G43120.1, intron 6 of 6) 1130 AT2G43120 AT2G43120 PIRIN2|PRN2 RmlC-like cupins superfamily protein protein-coding common peak7797 2 17965399 17966724 + promoter-TSS (AT2G43230.2) -190 AT2G43230 AT2G43230 F14B2.17 Protein kinase superfamily protein protein-coding common peak7807 2 18018554 18020688 + promoter-TSS (AT2G43375.1) 172 AT2G43386 AT2G43386 - transmembrane protein protein-coding common peak7809 2 18030446 18031785 + TTS (AT2G43420.1) 128 AT2G43410 FPA T1O24.15 RNA binding protein protein-coding common peak7812 2 18041346 18041938 + TTS (AT2G43440.1) 235 AT2G43445 AT2G43445 - F-box and associated interaction domains-containing protein protein-coding common peak7881 2 18387725 18388086 + exon (AT2G44540.1, exon 1 of 4) 205 AT2G44540 GH9B9 AtGH9B9|F4I1.52|F4I1_52|glycosyl hydrolase 9B9 glycosyl hydrolase 9B9 protein-coding VNsp peak7882 2 18392585 18393861 + TTS (AT2G44570.1) 506 AT2G44560 GH9B11 AtGH9B11|F16B22.5|glycosyl hydrolase 9B11 glycosyl hydrolase 9B11 protein-coding VNsp peak8066 2 19253221 19254337 + TTS (AT2G46850.1) 109 AT2G46860 PPa3 AtPPa3|F19D11.23|F19D11_23|pyrophosphorylase 3 pyrophosphorylase 3 protein-coding VNsp peak8069 2 19269196 19270003 + promoter-TSS (AT2G46900.1) 41 AT2G46900 AT2G46900 F14M4.27 transcription factor-like protein protein-coding common peak8077 2 19324662 19325495 + exon (AT2G47030.1, exon 2 of 2) 1406 AT2G47030 VGDH1 F14M4.14 Plant invertase/pectin methylesterase inhibitor superfamily protein-coding VNsp peak8083 2 19349164 19350468 + TTS (AT2G47140.1) 834 AT2G47130 SDR3 AtSDR3|F14M4.4|short-chain dehydrogenase/reductase 2 NAD(P)-binding Rossmann-fold superfamily protein protein-coding common peak8103 2 19431290 19432871 + promoter-TSS (AT2G47330.1) -67 AT2G47340 AT2G47340 T8I13.18 Plant invertase/pectin methylesterase inhibitor superfamily protein protein-coding VNsp peak8104 2 19433454 19433987 + promoter-TSS (AT2G47350.2) -5 AT2G47350 AT2G47350 T8I13.19 HIT zinc finger and PAPA-1-like domain-containing protein protein-coding common peak8160 3 27400 28544 + promoter-TSS (AT3G01085.3) 36 AT3G01085 AT3G01085 - Protein kinase superfamily protein protein-coding common peak8229 3 429491 430346 + promoter-TSS (AT3G01115.1) 37 AT3G01115 AT3G01115 - ncRNA ncRNA common peak8170 3 83813 85702 + promoter-TSS (AT3G01280.1) 144 AT3G01270 AT3G01270 T22N4.10|T22N4_10|T4P13.4|T4P13_4 Pectate lyase family protein protein-coding common peak8173 3 103368 106508 + promoter-TSS (AT3G01311.1) -29 AT3G01316 AT3G01316 60221.SNORNA00002 ncRNA ncRNA common peak8176 3 128950 129810 + promoter-TSS (AT3G01340.2) 242 AT3G01345 AT3G01345 - Expressed protein protein-coding common peak8217 3 383133 383744 + exon (AT3G02130.1, exon 1 of 1) 2941 AT3G02130 RPK2 CLI1|F1C9.8|F1C9_8|TOAD2|TOADSTOOL 2|clv3 peptide insensitive 1|receptor-like protein kinase 2 receptor-like protein kinase 2 protein-coding VNsp peak8638 3 2857510 2859241 + promoter-TSS (AT3G02165.1) 93 AT3G02165 AT3G02165 - ncRNA ncRNA common peak8267 3 669974 671133 + promoter-TSS (AT3G02970.1) 14 AT3G02970 EXL6 EXORDIUM like 6|F13E7.8|F13E7_8 EXORDIUM like 6 protein-coding VNsp peak8270 3 690470 690997 + exon (AT3G03050.1, exon 4 of 4) -1201 AT3G03060 AT3G03060 T17B22.25|T17B22_25 P-loop containing nucleoside triphosphate hydrolases superfamily protein protein-coding VNsp peak8295 3 824276 825212 + promoter-TSS (AT3G03460.1) -198 AT3G03460 AT3G03460 T21P5.12|T21P5_12 mediator of RNA polymerase II transcription subunit-like protein protein-coding common peak8301 3 855247 855587 + intron (AT3G03560.1, intron 7 of 18) 1226 AT3G03560 AT3G03560 T21P5.2 hypothetical protein protein-coding common peak9272 3 6308174 6308462 + exon (AT3G18370.1, exon 8 of 13) -2640 AT3G03675 AT3G03675 - ncRNA ncRNA common peak8313 3 929335 930262 + exon (AT3G03720.1, exon 1 of 14) 204 AT3G03720 CAT4 F20H23.25|F20H23_25|cationic amino acid transporter 4 cationic amino acid transporter 4 protein-coding VNsp peak8314 3 935128 935349 + promoter-TSS (AT3G03726.2) -774 AT3G03726 AT3G03726 - F-box/kelch-repeat protein, putative (DUF295) protein-coding VNsp peak8318 3 968160 969325 + promoter-TSS (AT3G03800.1) -308 AT3G03800 SYP131 ATSYP131|F20H23.28|F20H23_28|syntaxin of plants 131 syntaxin of plants 131 protein-coding common peak9344 3 6688040 6688504 + promoter-TSS (AT3G03815.1) -364 AT3G03815 AT3G03815 - ncRNA ncRNA common peak9438 3 7234909 7235180 + promoter-TSS (AT3G20700.1) -9 AT3G03985 AT3G03985 - ncRNA ncRNA VNsp peak8337 3 1070884 1072802 + promoter-TSS (AT3G04080.1) -405 AT3G04080 APY1 APYRASE 1|ATAPY1|T6K12.30|T6K12_30|apyrase 1 apyrase 1 protein-coding common peak9528 3 7690140 7690558 + TTS (AT3G04195.1) 693 AT3G04195 AT3G04195 - ncRNA ncRNA common peak8347 3 1113363 1114087 + TTS (AT3G04240.2) 134 AT3G04230 AT3G04230 T6K12.15|T6K12_15 Ribosomal protein S5 domain 2-like superfamily protein protein-coding VNsp peak9621 3 8102471 8103418 + Intergenic 1705 AT3G04325 AT3G04325 - ncRNA ncRNA common peak8355 3 1166576 1167141 + promoter-TSS (AT3G04400.2) -392 AT3G04400 emb2171 T27C4.4|T27C4_4|embryo defective 2171 Ribosomal protein L14p/L23e family protein protein-coding common peak8372 3 1275741 1277159 + promoter-TSS (AT3G04710.3) -218 AT3G04700 AT3G04700 F7O18.17|F7O18_17 carboxylate clamp-TPR protein (DUF1685) protein-coding VNsp peak8394 3 1388710 1389883 + promoter-TSS (AT3G05000.1) -75 AT3G05010 Cand2 T9J14.4|T9J14_4|candidate G-protein Coupled Receptor 2 Protein of unknown function, transmembrane-40 protein-coding common peak9909 3 9719182 9719653 + promoter-TSS (AT3G05045.1) -534 AT3G05045 AT3G05045 - ncRNA ncRNA common peak8416 3 1515013 1516258 + promoter-TSS (AT3G05320.1) -67 AT3G05320 AT3G05320 T12H1.29|T12H1_29 O-fucosyltransferase family protein protein-coding common peak10059 3 10483559 10485378 + promoter-TSS (AT3G05385.1) -90 AT3G05385 AT3G05385 - ncRNA ncRNA VNsp peak10060 3 10491399 10493323 + intron (AT3G05445.1, intron 1 of 1) 197 AT3G05445 AT3G05445 - ncRNA ncRNA common peak8425 3 1574972 1576479 + intron (AT3G05450.1, intron 3 of 7) 693 AT3G05450 AT3G05450 F22F7.10|F22F7_10 cystatin-like protein protein-coding common peak10121 3 10908358 10909122 + Intergenic 2201 AT3G05585 AT3G05585 - ncRNA ncRNA common peak10123 3 10927882 10928131 + Intergenic -2187 AT3G05595 AT3G05595 - ncRNA ncRNA VNsp peak10127 3 10949258 10949456 + Intergenic 2400 AT3G05605 AT3G05605 - ncRNA ncRNA common peak8441 3 1637701 1638741 + exon (AT3G05630.1, exon 11 of 16) 3027 AT3G05630 PLDP2 F18C1.10|F18C1_10|PDLZ2|PHOSPHOLIPASE D|PHOSPHOLIPASE D ZETA 2|PLDZETA2|phospholipase D P2 phospholipase D P2 protein-coding VNsp peak10142 3 11064393 11064648 + TTS (AT3G05665.1) 308 AT3G05665 AT3G05665 - ncRNA ncRNA VNsp peak8446 3 1661735 1662096 + exon (AT3G05680.2, exon 26 of 28) -1486 AT3G05675 AT3G05675 - BTB/POZ domain-containing protein protein-coding VNsp peak10149 3 11108563 11110107 + Intergenic 1707 AT3G05705 AT3G05705 - ncRNA ncRNA common peak10156 3 11154016 11155727 + TTS (AT3G05715.1) 628 AT3G05715 AT3G05715 - ncRNA ncRNA common peak10189 3 11408876 11409553 + Intergenic -4402 AT3G05785 AT3G05785 - ncRNA ncRNA VNsp peak10191 3 11424874 11425234 + Intergenic -9839 AT3G05795 AT3G05795 - ncRNA ncRNA VNsp peak8461 3 1743990 1744770 + exon (AT3G05850.1, exon 3 of 3) 2405 AT3G05850 MUG7 F10A16.15|F10A16_15|MUSTANG 7 MuDR family transposase protein-coding VNsp peak10194 3 11482934 11483136 + TTS (AT3G05895.1) 1523 AT3G05895 AT3G05895 - ncRNA ncRNA VNsp peak10195 3 11485739 11486816 + promoter-TSS (AT3G05915.1) -542 AT3G05915 AT3G05915 - ncRNA ncRNA VNsp peak8465 3 1769838 1771096 + promoter-TSS (AT3G05920.1) 130 AT3G05930 GLP8 F2O10.11|F2O10_11|germin-like protein 8 germin-like protein 8 protein-coding VNsp peak10221 3 11778590 11779074 + Intergenic 4096 AT3G06015 AT3G06015 - ncRNA ncRNA VNsp peak10246 3 12233738 12234510 + Intergenic 8351 AT3G06055 AT3G06055 - ncRNA ncRNA common peak10250 3 12317546 12318369 + Intergenic -14314 AT3G06065 AT3G06065 - ncRNA ncRNA VNsp peak10251 3 12331544 12332822 + promoter-TSS (AT3G06065.1) -88 AT3G06065 AT3G06065 - ncRNA ncRNA VNsp peak10252 3 12338176 12338613 + Intergenic 6123 AT3G06065 AT3G06065 - ncRNA ncRNA VNsp peak10258 3 12370882 12371499 + promoter-TSS (AT3G30739.1) 437 AT3G06075 AT3G06075 - ncRNA ncRNA VNsp peak10259 3 12378192 12378475 + Intergenic 7580 AT3G06075 AT3G06075 - ncRNA ncRNA VNsp peak10263 3 12458172 12459557 + TTS (AT3G06095.1) 260 AT3G06095 AT3G06095 - ncRNA ncRNA VNsp peak10264 3 12473137 12473691 + Intergenic -14290 AT3G06095 AT3G06095 - ncRNA ncRNA VNsp peak10267 3 12559246 12560569 + promoter-TSS (AT3G06115.1) -775 AT3G06115 AT3G06115 - ncRNA ncRNA common peak10268 3 12571429 12572353 + Intergenic 1416 AT3G06135 AT3G06135 - ncRNA ncRNA common peak10269 3 12572993 12573595 + promoter-TSS (AT3G06135.1) 13 AT3G06135 AT3G06135 - ncRNA ncRNA VNsp peak10275 3 12653541 12653880 + Intergenic 10846 AT3G06185 AT3G06185 - ncRNA ncRNA VNsp peak10276 3 12666428 12668075 + Intergenic 24387 AT3G06185 AT3G06185 - ncRNA ncRNA common peak10277 3 12668772 12669248 + Intergenic 26146 AT3G06185 AT3G06185 - ncRNA ncRNA VNsp peak10278 3 12670947 12671371 + Intergenic 28295 AT3G06185 AT3G06185 - ncRNA ncRNA common peak10287 3 12905011 12905895 + promoter-TSS (AT3G06215.1) -836 AT3G06215 AT3G06215 - ncRNA ncRNA VNsp peak10293 3 12970632 12971059 + promoter-TSS (AT3G06245.1) 37 AT3G06245 AT3G06245 - ncRNA ncRNA VNsp peak10298 3 13071471 13072470 + Intergenic -2924 AT3G06275 AT3G06275 - ncRNA ncRNA VNsp peak10306 3 13310056 13310373 + Intergenic 3768 AT3G06285 AT3G06285 - ncRNA ncRNA VNsp peak10307 3 13313837 13314107 + promoter-TSS (AT3G06285.1) 10 AT3G06285 AT3G06285 - ncRNA ncRNA VNsp peak10328 3 13957121 13957925 + Intergenic -58886 AT3G06315 AT3G06315 - ncRNA ncRNA VNsp peak10329 3 13959409 13960477 + Intergenic -61306 AT3G06315 AT3G06315 - ncRNA ncRNA VNsp peak8487 3 1923498 1924066 + promoter-TSS (AT3G06340.3) -44 AT3G06340 AT3G06340 F24P17.19|F24P17_19 DNAJ heat shock N-terminal domain-containing protein protein-coding VNsp peak10339 3 14196517 14197003 + promoter-TSS (ENSRNA049451242-T1) -14 at3g06345 common peak10359 3 14364245 14364715 + Intergenic 34888 AT3G06375 AT3G06375 - ncRNA ncRNA VNsp peak10369 3 14633130 14634598 + Intergenic 22664 AT3G06395 AT3G06395 - ncRNA ncRNA VNsp peak10370 3 14648723 14648945 + Intergenic 7694 AT3G06395 AT3G06395 - ncRNA ncRNA common peak10375 3 14723877 14724705 + promoter-TSS (AT3G06425.1) -54 AT3G06425 AT3G06425 - ncRNA ncRNA VNsp peak10376 3 14727201 14727991 + exon (AT3G42640.1, exon 10 of 12) -3359 AT3G06425 AT3G06425 - ncRNA ncRNA VNsp peak10377 3 14728614 14729202 + TTS (AT3G42640.1) -4671 AT3G06425 AT3G06425 - ncRNA ncRNA VNsp peak8492 3 1959240 1961702 + Intergenic -2167 AT3G06430 PPR2 AtPPR2|EMB2750|F24P17.10|F24P17_10|embryo defective 2750|pentatricopeptide repeat 2 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding common peak10382 3 14782724 14784931 + Intergenic -7347 AT3G06465 AT3G06465 - ncRNA ncRNA VNsp peak10383 3 14811086 14812132 + Intergenic 20435 AT3G06465 AT3G06465 - ncRNA ncRNA common peak8497 3 1985960 1986248 + TTS (AT3G06470.1) 2373 AT3G06470 AT3G06470 F24P17.3|F24P17_3 GNS1/SUR4 membrane protein family protein-coding VNsp peak8498 3 1990909 1991288 + promoter-TSS (AT3G06480.2) -853 AT3G06480 AT3G06480 F24P17.2|F24P17_2 DEAD box RNA helicase family protein protein-coding common peak10419 3 15233303 15233574 + TTS (AT3G43300.3) 1244 AT3G06575 AT3G06575 - ncRNA ncRNA VNsp peak10424 3 15293631 15294120 + Intergenic -1535 AT3G06585 AT3G06585 - ncRNA ncRNA VNsp peak10454 3 15677696 15678062 + Intergenic -2459 AT3G06675 AT3G06675 - ncRNA ncRNA VNsp peak10456 3 15701054 15701308 + TTS (AT3G06685.1) 312 AT3G06685 AT3G06685 - ncRNA ncRNA common peak10467 3 15829203 15829814 + promoter-TSS (AT3G06715.1) 16 AT3G06715 AT3G06715 - ncRNA ncRNA common peak10468 3 15851922 15852128 + Intergenic 5264 AT3G06735 AT3G06735 - ncRNA ncRNA VNsp peak10469 3 15856444 15856777 + Intergenic 9849 AT3G06735 AT3G06735 - ncRNA ncRNA VNsp peak8544 3 2264652 2265265 + promoter-TSS (AT3G07150.1) -237 AT3G07150 AT3G07150 - amino acid-ligase protein-coding VNsp peak8560 3 2359991 2360616 + TTS (AT3G07380.1) 246 AT3G07370 CHIP ATCHIP|CARBOXYL TERMINUS OF HSC70-INTERACTING PROTEIN|carboxyl terminus of HSC70-interacting protein carboxyl terminus of HSC70-interacting protein protein-coding common peak10633 3 17018310 17020471 + TTS (AT3G46320.1) 344 AT3G07395 AT3G07395 - ncRNA ncRNA common peak8569 3 2412160 2412796 + intron (AT3G07560.1, intron 2 of 4) 1109 AT3G07560 PEX13 ABERRANT PEROXISOME MORPHOLOGY 2|APM2|peroxin 13 peroxin 13 protein-coding VNsp peak10699 3 17394191 17395207 + Intergenic -3972 AT3G07675 AT3G07675 - ncRNA ncRNA common peak8578 3 2455022 2455904 + TTS (AT3G07670.2) 224 AT3G07680 p24beta2 MLP3.13|p24 subfamily beta 2 emp24/gp25L/p24 family/GOLD family protein protein-coding common peak8582 3 2496246 2498208 + exon (AT3G07820.1, exon 3 of 4) 868 AT3G07820 AT3G07820 - Pectin lyase-like superfamily protein protein-coding VNsp peak10780 3 17827255 17828534 + TTS (AT3G48195.1) -3394 AT3G07885 AT3G07885 - ncRNA ncRNA VNsp peak10911 3 18500904 18502312 + promoter-TSS (AT3G08085.1) -914 AT3G08085 AT3G08085 - ncRNA ncRNA common peak11335 3 20692258 20692946 + promoter-TSS (AT3G08595.1) -90 AT3G08595 AT3G08595 - ncRNA ncRNA common peak11375 3 20884531 20885235 + exon (AT3G56310.2, exon 9 of 13) -1566 AT3G08645 AT3G08645 - ncRNA ncRNA common peak8619 3 2726234 2727385 + promoter-TSS (AT3G08950.1) -384 AT3G08950 HCC1 homologue of the copper chaperone SCO1 electron transport SCO1/SenC family protein protein-coding common peak8629 3 2807059 2807337 + promoter-TSS (AT3G09160.1) -143 AT3G09160 AT3G09160 - RNA-binding (RRM/RBD/RNP motifs) family protein protein-coding common peak11572 3 21883338 21884526 + promoter-TSS (AT3G59190.1) 265 AT3G09195 AT3G09195 - ncRNA ncRNA common peak8632 3 2832661 2833674 + promoter-TSS (AT3G09230.1) -179 AT3G09230 MYB1 AtMYB1|myb domain protein 1 myb domain protein 1 protein-coding common peak8644 3 2883367 2883966 + Intergenic 2429 AT3G09380 AT3G09380 - MIP18 family protein protein-coding common peak8654 3 2931657 2932323 + promoter-TSS (AT3G09540.1) 528 AT3G09550 AT3G09550 - Ankyrin repeat family protein protein-coding VNsp peak11732 3 22663728 22664396 + promoter-TSS (AT3G09575.1) -525 AT3G09575 AT3G09575 - ncRNA ncRNA VNsp peak8660 3 2965850 2966936 + promoter-TSS (AT3G09660.2) 18 AT3G09670 AT3G09670 - Tudor/PWWP/MBT superfamily protein protein-coding VNsp peak8661 3 2970232 2970778 + promoter-TSS (AT3G09680.1) -134 AT3G09680 AT3G09680 - Ribosomal protein S12/S23 family protein protein-coding common peak8662 3 2971513 2971885 + promoter-TSS (AT3G09690.2) -114 AT3G09690 AT3G09690 - alpha/beta-Hydrolases superfamily protein protein-coding common peak11763 3 22833081 22835174 + promoter-TSS (AT3G61700.1) 757 AT3G09695 AT3G09695 - ncRNA ncRNA common peak8664 3 2992267 2992971 + promoter-TSS (AT3G09750.1) 60 AT3G09750 AT3G09750 - Galactose oxidase/kelch repeat superfamily protein protein-coding common peak8665 3 2995570 2996453 + promoter-TSS (AT3G09760.1) -317 AT3G09760 AT3G09760 - RING/U-box superfamily protein protein-coding common peak8671 3 3032366 3033126 + TTS (AT3G09880.1) 187 AT3G09890 AT3G09890 - Ankyrin repeat family protein protein-coding common peak8684 3 3115183 3116031 + promoter-TSS (AT3G10110.4) -503 AT3G10110 MEE67 maternal effect embryo arrest 67 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein protein-coding common peak8702 3 3205905 3206245 + exon (AT3G10340.1, exon 2 of 3) 2087 AT3G10340 PAL4 phenylalanine ammonia-lyase 4 phenylalanine ammonia-lyase 4 protein-coding common peak8723 3 3324708 3325629 + promoter-TSS (AT3G10640.2) -83 AT3G10640 VPS60.1 - SNF7 family protein protein-coding VNsp peak8745 3 3469732 3470643 + promoter-TSS (AT3G11080.2) -117 AT3G11080 RLP35 AtRLP35|F11B9.4|receptor like protein 35 receptor like protein 35 protein-coding VNsp peak8756 3 3537298 3538129 + exon (AT3G11290.2, exon 1 of 3) 191 AT3G11290 AT3G11290 - Myb/SANT-like DNA-binding domain protein protein-coding common peak8794 3 3758144 3758945 + promoter-TSS (AT3G11900.2) 92 AT3G11900 ANT1 aromatic and neutral transporter 1 aromatic and neutral transporter 1 protein-coding common peak8802 3 3805727 3807232 + exon (AT3G11964.1, exon 1 of 40) 147 AT3G11964 AT3G11964 RRP5|Ribosomal RNA Processing 5 RIBOSOMAL RNA PROCESSING 5 protein-coding VNsp peak8806 3 3836624 3837874 + promoter-TSS (AT3G12040.1) -400 AT3G12040 AT3G12040 MEC18.4 DNA-3-methyladenine glycosylase (MAG) protein-coding VNsp peak8807 3 3838897 3839613 + exon (AT3G12050.2, exon 1 of 4) 153 AT3G12050 AT3G12050 MEC18.18 Aha1 domain-containing protein protein-coding VNsp peak8823 3 3930857 3932420 + promoter-TSS (AT3G12345.1) 170 AT3G12350 AT3G12350 - F-box family protein protein-coding common peak8824 3 3937826 3938891 + promoter-TSS (AT3G12370.1) -203 AT3G12370 AT3G12370 - Ribosomal protein L10 family protein protein-coding VNsp peak8845 3 4029980 4032324 + promoter-TSS (AT3G12685.1) -797 AT3G12685 AT3G12685 - Acid phosphatase/vanadium-dependent haloperoxidase-related protein protein-coding VNsp peak8849 3 4054352 4055089 + promoter-TSS (AT3G12760.1) -4 AT3G12760 AT3G12760 - defective in cullin neddylation protein protein-coding common peak8853 3 4073355 4073874 + TTS (AT3G12820.2) 1459 AT3G12820 MYB10 AtMYB10|myb domain protein 10 myb domain protein 10 protein-coding common peak8863 3 4112209 4112527 + promoter-TSS (AT3G12915.1) -466 AT3G12915 AT3G12915 MGH6.2 Ribosomal protein S5/Elongation factor G/III/V family protein protein-coding common peak8875 3 4214800 4216273 + exon (AT3G13110.1, exon 1 of 1) 766 AT3G13110 SERAT2;2 ATSERAT2;2|SAT-1|SAT-A|SAT-M|SAT3|SERINE ACETYLTRANSFERASE 3|SERINE ACETYLTRANSFERASE A|SERINE ACETYLTRANSFERASE-1|SERINE ACETYLTRANSFERASE-MITOCHONDRIAL|serine acetyltransferase 2;2 serine acetyltransferase 2;2 protein-coding common peak8886 3 4262356 4263338 + promoter-TSS (AT3G13225.1) 69 AT3G13225 AT3G13225 - WW domain-containing protein protein-coding common peak8890 3 4288684 4290428 + promoter-TSS (AT3G13277.1) 304 AT3G13275 AT3G13275 - transmembrane protein protein-coding common peak8891 3 4296796 4298162 + promoter-TSS (AT3G13280.1) 197 AT3G13290 VCR varicose-related varicose-like protein protein-coding common peak8919 3 4464662 4465400 + exon (AT3G13660.1, exon 1 of 1) 234 AT3G13660 AT3G13660 - Disease resistance-responsive (dirigent-like protein) family protein protein-coding common peak8946 3 4604617 4605934 + exon (AT3G13950.1, exon 2 of 2) 1390 AT3G13950 AT3G13950 - ankyrin protein-coding common peak9007 3 4949094 4949809 + TTS (AT3G14720.1) 1895 AT3G14730 AT3G14730 - Pentatricopeptide repeat (PPR) superfamily protein protein-coding VNsp peak9066 3 5252132 5253556 + promoter-TSS (AT3G15520.3) -52 AT3G15520 AT3G15520 - Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein protein-coding common peak9070 3 5275014 5275402 + promoter-TSS (ENSRNA049492715-T1) 59 AT3G15585 AT3G15585 60524.TRNA-PHE-1 tRNA tRNA common peak9071 3 5277950 5279117 + promoter-TSS (AT3G15590.1) -514 AT3G15590 AT3G15590 - Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding common peak9072 3 5285917 5287179 + promoter-TSS (AT3G15605.1) -775 AT3G15605 AT3G15605 - nucleic acid binding protein protein-coding VNsp peak9080 3 5328758 5329965 + promoter-TSS (AT3G15730.1) -833 AT3G15730 PLDALPHA1 PHOSPHOLIPASE D|PLD|phospholipase D alpha 1 phospholipase D alpha 1 protein-coding common peak9122 3 5528085 5529475 + promoter-TSS (AT3G16310.1) -178 AT3G16310 AT3G16310 - mitotic phosphoprotein N' end (MPPN) family protein protein-coding common peak9148 3 5661668 5662824 + promoter-TSS (AT3G16620.1) -180 AT3G16620 TOC120 ARABIDOPSIS THALIANA TRANSLOCON OUTER COMPLEX PROTEIN 120|ATTOC120|translocon outer complex protein 120 translocon outer complex protein 120 protein-coding common peak9150 3 5669324 5670141 + exon (AT3G16640.1, exon 4 of 4) 1110 AT3G16640 TCTP translationally controlled tumor protein translationally controlled tumor protein protein-coding common peak9163 3 5750488 5750880 + exon (AT3G16850.1, exon 5 of 5) 2187 AT3G16850 AT3G16850 - Pectin lyase-like superfamily protein protein-coding common peak9172 3 5793544 5794607 + promoter-TSS (AT3G16970.1) 15 AT3G16970 AT3G16970 - Plant self-incompatibility protein S1 family protein-coding common peak9175 3 5808101 5809592 + promoter-TSS (AT3G17030.1) -268 AT3G17030 AT3G17030 - Nucleic acid-binding proteins superfamily protein-coding common peak9177 3 5816100 5816531 + TTS (AT3G17060.1) 2183 AT3G17060 AT3G17060 - Pectin lyase-like superfamily protein protein-coding VNsp peak9178 3 5818148 5818953 + promoter-TSS (AT3G17060.1) -52 AT3G17060 AT3G17060 - Pectin lyase-like superfamily protein protein-coding common peak9191 3 5891004 5891267 + TTS (AT3G17240.2) 1081 AT3G17240 mtLPD2 LIPOAMIDE DEHYDROGENASE 2|lipoamide dehydrogenase 2 lipoamide dehydrogenase 2 protein-coding common peak9217 3 6027325 6028157 + promoter-TSS (AT3G17620.1) -47 AT3G17620 AT3G17620 - F-box and associated interaction domains-containing protein protein-coding common peak9218 3 6028787 6029259 + promoter-TSS (AT3G17630.2) 20 AT3G17630 CHX19 ATCHX19|cation/H+ exchanger 19 cation/H+ exchanger 19 protein-coding VNsp peak9225 3 6072802 6073328 + promoter-TSS (AT3G17740.1) -209 AT3G17740 AT3G17740 - hypothetical protein protein-coding common peak9245 3 6162423 6163172 + exon (AT3G18010.1, exon 2 of 4) 656 AT3G18010 WOX1 WUSCHEL related homeobox 1 WUSCHEL related homeobox 1 protein-coding common peak9264 3 6264457 6265119 + TTS (AT3G18270.1) -2158 AT3G18280 AT3G18280 - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein protein-coding VNsp peak9268 3 6292139 6292617 + promoter-TSS (AT3G18330.1) -58 AT3G18330 AT3G18330 - F-box family protein protein-coding common peak9291 3 6418850 6419742 + promoter-TSS (AT3G18650.1) -792 AT3G18650 AGL103 AGAMOUS-like 103 AGAMOUS-like 103 protein-coding common peak9301 3 6482199 6482627 + exon (AT3G18810.1, exon 2 of 7) 1361 AT3G18810 PERK6 AtPERK6|proline-rich extensin-like receptor kinase 6 Protein kinase superfamily protein protein-coding VNsp peak9304 3 6495716 6496332 + promoter-TSS (AT3G18840.2) -111 AT3G18840 AT3G18840 - LOW protein: PPR containing-like protein protein-coding common peak9318 3 6560844 6561055 + exon (AT3G19020.1, exon 1 of 1) 1352 AT3G19020 AT3G19020 - Leucine-rich repeat (LRR) family protein protein-coding common peak9319 3 6561472 6562076 + exon (AT3G19020.1, exon 1 of 1) 527 AT3G19020 AT3G19020 - Leucine-rich repeat (LRR) family protein protein-coding common peak9330 3 6614057 6615393 + promoter-TSS (AT3G19130.1) 610 AT3G19140 DNF DAY NEUTRAL FLOWERING RING/U-box superfamily protein protein-coding common peak9336 3 6658424 6659420 + promoter-TSS (AT3G19210.2) 41 AT3G19210 RAD54 ATRAD54|CHR25|homolog of RAD54 DNA repair/recombination protein protein-coding common peak9337 3 6663383 6664716 + promoter-TSS (AT3G19240.1) 5 AT3G19240 AT3G19240 - Vacuolar import/degradation, Vid27-related protein protein-coding common peak9359 3 6766400 6768110 + promoter-TSS (AT3G19510.2) -658 AT3G19510 HAT3.1 - Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein protein-coding common peak9360 3 6772379 6773070 + promoter-TSS (AT3G19520.2) 37 AT3G19520 AT3G19520 - hypothetical protein (DUF626) protein-coding common peak9368 3 6823006 6823499 + promoter-TSS (AT3G19650.1) -64 AT3G19650 AT3G19650 - cyclin-like protein protein-coding VNsp peak9369 3 6827821 6828417 + TTS (AT3G19670.1) 1455 AT3G19663 AT3G19663 - hypothetical protein protein-coding common peak9381 3 6912472 6913071 + promoter-TSS (AT3G19880.1) -167 AT3G19880 AT3G19880 - F-box and associated interaction domains-containing protein protein-coding common peak9382 3 6915822 6916644 + promoter-TSS (AT3G19890.1) -91 AT3G19890 AT3G19890 - F-box family protein protein-coding common peak9396 3 6998447 6998834 + TTS (AT3G20040.1) 3795 AT3G20050 TCP-1 ATTCP-1|T-complex protein 1 alpha subunit T-complex protein 1 alpha subunit protein-coding common peak9406 3 7054511 7055258 + promoter-TSS (AT3G20220.1) 56 AT3G20220 AT3G20220 SAUR47|SMALL AUXIN UPREGULATED RNA 47 SAUR-like auxin-responsive protein family protein-coding VNsp peak9425 3 7165692 7167467 + TTS (AT3G20520.1) 532 AT3G20530 AT3G20530 - Protein kinase superfamily protein protein-coding VNsp peak9426 3 7173749 7174127 + TTS (AT3G20550.1) 4082 AT3G20550 DDL DAWDLE SMAD/FHA domain-containing protein protein-coding common peak9429 3 7186928 7190674 + exon (AT3G20580.1, exon 3 of 3) -1280 AT3G20570 ENODL9 AtENODL9|early nodulin-like protein 9 early nodulin-like protein 9 protein-coding common peak9430 3 7197712 7199281 + TTS (AT3G20620.1) 1773 AT3G20610 AT3G20610 - non-race specific disease resistance protein protein-coding common peak9440 3 7238302 7239830 + promoter-TSS (AT3G20710.1) 83 AT3G20710 AT3G20710 - F-box family protein protein-coding common peak9453 3 7319248 7320335 + promoter-TSS (AT3G20885.1) 2 AT3G20890 AT3G20890 - RNA-binding (RRM/RBD/RNP motifs) family protein protein-coding common peak9455 3 7330409 7331103 + promoter-TSS (AT3G20920.2) -5 AT3G20920 AT3G20920 - translocation protein-like protein protein-coding common peak9472 3 7418167 7419013 + promoter-TSS (AT3G21160.2) -105 AT3G21165 AT3G21165 - F-box/associated interaction domain protein protein-coding common peak9475 3 7431484 7433362 + TTS (AT3G21180.1) 2320 AT3G21190 MSR1 AtMSR1|Mannan Synthesis Related 1 O-fucosyltransferase family protein protein-coding VNsp peak9477 3 7440392 7441199 + promoter-TSS (AT3G04065.1) 31 AT3G21210 AT3G21210 - zinc ion binding protein protein-coding common peak9500 3 7559868 7560312 + promoter-TSS (AT3G21465.2) -598 AT3G21465 AT3G21465 - adenylyl cyclase protein-coding common peak9507 3 7585382 7586682 + promoter-TSS (AT3G21530.2) -176 AT3G21530 AT3G21530 - DNAse I-like superfamily protein protein-coding common peak9510 3 7600015 7601516 + exon (AT3G21570.1, exon 1 of 1) 155 AT3G21570 AT3G21570 - proline-rich nuclear receptor coactivator protein-coding common peak9520 3 7645137 7645555 + exon (AT3G21700.2, exon 3 of 4) 871 AT3G21700 SGP2 ATSGP2 Ras-related small GTP-binding family protein protein-coding common peak9526 3 7681363 7682672 + promoter-TSS (AT3G21800.1) -220 AT3G21800 UGT71B8 UDP-glucosyl transferase 71B8 UDP-glucosyl transferase 71B8 protein-coding common peak9532 3 7703163 7704158 + promoter-TSS (AT3G21865.1) -156 AT3G21865 PEX22 peroxin 22 peroxin 22 protein-coding common peak9546 3 7747877 7749171 + promoter-TSS (AT3G21990.1) -723 AT3G21990 AT3G21990 - cysteine-rich repeat secretory-like protein (DUF26) protein-coding common peak9548 3 7760922 7762652 + promoter-TSS (AT3G22040.1) -20 AT3G22040 AT3G22040 - cysteine-rich repeat secretory-like protein (DUF26) protein-coding common peak9550 3 7771073 7771745 + intron (AT3G22060.1, intron 1 of 1) 510 AT3G22060 AT3G22060 - Receptor-like protein kinase-related family protein protein-coding common peak9571 3 7880507 7880851 + promoter-TSS (AT3G22290.2) -868 AT3G22290 AT3G22290 AT3G22280 Endoplasmic reticulum vesicle transporter protein protein-coding common peak9572 3 7881116 7882356 + exon (AT3G22290.2, exon 1 of 12) 189 AT3G22290 AT3G22290 AT3G22280 Endoplasmic reticulum vesicle transporter protein protein-coding common peak9592 3 7977479 7978833 + exon (AT3G22520.1, exon 4 of 4) 479 AT3G22530 AT3G22530 - heat shock protein protein-coding common peak9600 3 8005314 8005634 + TTS (AT3G22600.1) 1576 AT3G22590 PHP CDC73|PLANT HOMOLOGOUS TO PARAFIBROMIN PLANT HOMOLOGOUS TO PARAFIBROMIN protein-coding common peak9606 3 8029673 8030461 + promoter-TSS (AT3G22723.1) 33 AT3G22720 AT3G22720 - F-box/associated interaction domain protein protein-coding common peak9612 3 8048322 8048813 + promoter-TSS (AT3G22780.1) 100 AT3G22770 AT3G22770 - F-box associated ubiquitination effector family protein protein-coding common peak9620 3 8100990 8101245 + promoter-TSS (AT3G22880.2) -185 AT3G22880 DMC1 ARABIDOPSIS HOMOLOG OF LILY MESSAGES INDUCED AT MEIOSIS 15|ARABIDOPSIS THALIANA DISRUPTION OF MEIOTIC CONTROL 1|ARLIM15|ATDMC1|DISRUPTION OF MEIOTIC CONTROL 1 DNA repair (Rad51) family protein protein-coding common peak9653 3 8283244 8283523 + TTS (AT3G23200.2) 1698 AT3G23210 bHLH34 basic Helix-Loop-Helix 34 basic helix-loop-helix (bHLH) DNA-binding superfamily protein protein-coding common peak9660 3 8299930 8300776 + TTS (AT3G23245.1) 480 AT3G23245 AT3G23245 - hypothetical protein protein-coding common peak9668 3 8343508 8343926 + promoter-TSS (AT3G23320.1) -912 AT3G23320 AT3G23320 MLM24.4 Polynucleotidyl transferase, ribonuclease H-like superfamily protein protein-coding common peak9669 3 8344604 8345799 + promoter-TSS (AT3G23325.1) -569 AT3G23325 AT3G23325 - Splicing factor 3B subunit 5/RDS3 complex subunit 10 protein-coding common peak9672 3 8373236 8373592 + promoter-TSS (AT3G23380.1) 39 AT3G23380 RIC5 ROP-interactive CRIB motif-containing protein 5 ROP-interactive CRIB motif-containing protein 5 protein-coding VNsp peak9673 3 8374524 8375897 + promoter-TSS (AT3G23390.1) -123 AT3G23390 AT3G23390 RPL36a A|RPL36aA Zinc-binding ribosomal protein family protein protein-coding common peak9674 3 8376702 8376955 + TTS (AT3G23390.1) 1477 AT3G23400 FIB4 fibrillin 4 Plastid-lipid associated protein PAP / fibrillin family protein protein-coding common peak9681 3 8411071 8412607 + promoter-TSS (AT3G23460.1) -480 AT3G23460 AT3G23460 - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein protein-coding common peak9710 3 8574380 8575174 + promoter-TSS (AT3G23780.1) -274 AT3G23790 AAE16 acyl activating enzyme 16 AMP-dependent synthetase and ligase family protein protein-coding common peak9711 3 8582015 8583438 + exon (AT3G23800.2, exon 3 of 6) 836 AT3G23800 SBP3 selenium-binding protein 3 selenium-binding protein 3 protein-coding common peak9724 3 8656227 8657555 + promoter-TSS (AT3G23960.1) 508 AT3G23955 AT3G23955 F14O13.14 F-box family protein protein-coding common peak9725 3 8662046 8662993 + promoter-TSS (AT3G23970.1) -831 AT3G23970 AT3G23970 - F-box family protein protein-coding VNsp peak9739 3 8740633 8742734 + promoter-TSS (AT3G24180.2) 42 AT3G24180 AT3G24180 - Beta-glucosidase, GBA2 type family protein protein-coding common peak9741 3 8751151 8752259 + promoter-TSS (AT3G24200.1) -20 AT3G24200 AT3G24200 - FAD/NAD(P)-binding oxidoreductase family protein protein-coding common peak9751 3 8820191 8820524 + TTS (AT3G24315.1) 2465 AT3G24315 AtSec20 SEC20 Sec20 family protein protein-coding VNsp peak9752 3 8822279 8823391 + promoter-TSS (AT3G24315.1) -13 AT3G24315 AtSec20 SEC20 Sec20 family protein protein-coding common peak9766 3 8910233 8911552 + exon (AT3G24490.1, exon 1 of 1) 470 AT3G24490 AT3G24490 - Alcohol dehydrogenase transcription factor Myb/SANT-like family protein protein-coding common peak9767 3 8917949 8919418 + promoter-TSS (AT3G24495.2) 4 AT3G24500 MBF1C ATMBF1C|MOB24.13|multiprotein bridging factor 1C multiprotein bridging factor 1C protein-coding common peak9784 3 9024051 9025106 + promoter-TSS (AT3G24715.1) -211 AT3G24710 AT3G24710 - NADPH-dependent diflavin oxidoreductase protein-coding common peak9786 3 9033254 9034519 + TTS (AT3G24740.1) -2094 AT3G24750 AT3G24750 - hypothetical protein protein-coding common peak9788 3 9039534 9040528 + promoter-TSS (AT3G24760.2) 17 AT3G24760 AT3G24760 - Galactose oxidase/kelch repeat superfamily protein protein-coding common peak9789 3 9041101 9041515 + intron (AT3G24760.2, intron 1 of 1) 1294 AT3G24760 AT3G24760 - Galactose oxidase/kelch repeat superfamily protein protein-coding common peak9792 3 9054880 9055821 + promoter-TSS (AT3G24800.1) -159 AT3G24800 PRT1 proteolysis 1 proteolysis 1 protein-coding common peak9801 3 9122612 9124520 + promoter-TSS (AT3G25040.1) -704 AT3G25040 ERD2B endoplasmic reticulum retention defective 2B endoplasmic reticulum retention defective 2B protein-coding common peak9807 3 9153772 9154278 + promoter-TSS (AT3G25140.1) -483 AT3G25140 QUA1 GALACTURONOSYLTRANSFERASE 8|GAUT8|QUASIMODO 1 Nucleotide-diphospho-sugar transferases superfamily protein protein-coding common peak9809 3 9164862 9166636 + TTS (AT3G25170.1) 664 AT3G25170 RALFL26 MJL12.13|ralf-like 26 ralf-like 26 protein-coding common peak9813 3 9182164 9182873 + promoter-TSS (AT3G25220.1) -98 AT3G25220 FKBP15-1 FK506-binding protein 15 kD-1 FK506-binding protein 15 kD-1 protein-coding common peak9826 3 9240865 9241214 + promoter-TSS (AT3G25490.1) -686 AT3G25490 AT3G25490 - Protein kinase family protein protein-coding VNsp peak9833 3 9292132 9292608 + promoter-TSS (AT3G25580.2) 25 AT3G25580 AT3G25580 - Thioredoxin superfamily protein protein-coding common peak9838 3 9327572 9327940 + Intergenic -5906 AT3G25640 AT3G25640 - MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) protein-coding VNsp peak9856 3 9427842 9428674 + promoter-TSS (AT3G25805.1) 19 AT3G25805 AT3G25805 - transmembrane protein protein-coding common peak9863 3 9482156 9483342 + exon (AT3G25900.2, exon 6 of 6) 1910 AT3G25900 HMT-1 ATHMT-1 Homocysteine S-methyltransferase family protein protein-coding common peak9868 3 9496050 9497092 + TTS (AT3G25940.1) 469 AT3G25950 AT3G25950 - TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein protein-coding common peak9872 3 9507055 9507794 + promoter-TSS (AT3G25990.1) -637 AT3G25990 AT3G25990 - Homeodomain-like superfamily protein protein-coding common peak9876 3 9520848 9521860 + promoter-TSS (AT3G26050.1) -383 AT3G26050 AT3G26050 - TPX2 (targeting protein for Xklp2) protein family protein-coding common peak9879 3 9541226 9542442 + promoter-TSS (AT3G26115.1) 351 AT3G26110 AT3G26110 - Anther-specific protein agp1-like protein protein-coding common peak9891 3 9607743 9608129 + promoter-TSS (AT3G26240.1) -743 AT3G26240 AT3G26240 - Cysteine/Histidine-rich C1 domain family protein protein-coding VNsp peak9892 3 9614761 9614993 + Intergenic -1709 AT3G26250 AT3G26250 - Cysteine/Histidine-rich C1 domain family protein protein-coding VNsp peak9893 3 9625000 9625258 + Intergenic 4071 AT3G26270 CYP71B25 ''cytochrome P450|cytochrome P450|family 71|polypeptide 25|polypeptide 25''|subfamily B cytochrome P450, family 71, subfamily B, polypeptide 25 protein-coding common peak9897 3 9658887 9660185 + promoter-TSS (AT3G26380.1) -470 AT3G26380 AT3G26380 - Melibiase family protein protein-coding common peak9899 3 9665711 9667524 + TTS (AT3G26395.1) 168 AT3G26400 EIF4B1 eukaryotic translation initiation factor 4B1 eukaryotic translation initiation factor 4B1 protein-coding common peak9914 3 9752999 9754144 + exon (AT3G26560.1, exon 1 of 2) 284 AT3G26560 AT3G26560 - ATP-dependent RNA helicase protein-coding common peak9923 3 9800463 9802125 + promoter-TSS (AT3G26670.4) 84 AT3G26680 SNM1 ATSNM1|SENSITIVE TO NITROGEN MUSTARD 1 DNA repair metallo-beta-lactamase family protein protein-coding common peak9930 3 9841759 9842359 + promoter-TSS (AT3G26750.1) 20 AT3G26750 AT3G26750 - HECT-like ubiquitin-conjugating enzyme (E2)-binding protein protein-coding common peak9931 3 9852981 9853374 + TTS (AT3G26782.1) 2646 AT3G26782 AT3G26782 - Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding common peak9942 3 9901770 9902189 + promoter-TSS (AT3G26860.1) -95 AT3G26860 AT3G26860 - Plant self-incompatibility protein S1 family protein-coding VNsp peak9947 3 9928890 9929737 + promoter-TSS (AT3G26934.1) -44 AT3G26934 AT3G26934 - hypothetical protein protein-coding common peak9950 3 9936872 9937694 + intron (AT3G26940.1, intron 4 of 4) -1784 AT3G26935 AT3G26935 - DHHC-type zinc finger family protein protein-coding common peak9985 3 10125214 10125792 + promoter-TSS (AT3G27350.1) -156 AT3G27350 AT3G27350 - transcriptional regulator ATRX-like protein protein-coding common peak9994 3 10154914 10155922 + promoter-TSS (AT3G27440.1) -20 AT3G27440 UKL5 uridine kinase-like 5 uridine kinase-like 5 protein-coding common peak10004 3 10204226 10205428 + promoter-TSS (AT3G27540.1) -247 AT3G27540 AT3G27540 - beta-1,4-N-acetylglucosaminyltransferase family protein protein-coding common peak10007 3 10219916 10222014 + promoter-TSS (AT3G27580.2) 639 AT3G27590 AT3G27590 - reverse transcriptase family protein protein-coding common peak10009 3 10231506 10232318 + promoter-TSS (AT3G27630.1) -330 AT3G27640 AT3G27640 - Transducin/WD40 repeat-like superfamily protein protein-coding common peak10012 3 10255010 10255236 + promoter-TSS (AT3G27690.1) 167 AT3G27680 AT3G27680 - Plant self-incompatibility protein S1 family protein-coding common peak10014 3 10261061 10262405 + exon (AT3G27700.1, exon 1 of 5) 241 AT3G27700 AT3G27700 - zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein protein-coding common peak10018 3 10287786 10288550 + promoter-TSS (AT3G27770.1) -237 AT3G27770 AT3G27770 - plant/protein protein-coding common peak10027 3 10337917 10339660 + exon (AT3G27880.1, exon 1 of 1) 640 AT3G27880 AT3G27880 - hypothetical protein (DUF1645) protein-coding common peak10034 3 10375065 10375268 + promoter-TSS (AT3G27940.3) 163 AT3G27940 LBD26 LOB domain-containing protein 26 LOB domain-containing protein 26 protein-coding common peak10045 3 10423816 10424900 + promoter-TSS (AT3G28030.4) 105 AT3G28030 UVH3 ULTRAVIOLET HYPERSENSITIVE 3|UV REPAIR DEFECTIVE 1|UVR1 5'-3' exonuclease family protein protein-coding common peak10047 3 10433816 10435403 + promoter-TSS (AT3G28040.1) -315 AT3G28040 AT3G28040 - Leucine-rich receptor-like protein kinase family protein protein-coding common peak10052 3 10449675 10450107 + intron (AT3G28070.1, intron 4 of 6) -1512 AT3G28080 UMAMIT47 Usually multiple acids move in and out Transporters 47 nodulin MtN21 /EamA-like transporter family protein protein-coding common peak10056 3 10471743 10472936 + TTS (AT3G28140.1) 1613 AT3G28150 TBL22 ALTERED XYLOGLUCAN 4-LIKE|AXY4L|TRICHOME BIREFRINGENCE-LIKE 22 TRICHOME BIREFRINGENCE-LIKE 22 protein-coding common peak10058 3 10477726 10478471 + Intergenic -4146 AT3G28150 TBL22 ALTERED XYLOGLUCAN 4-LIKE|AXY4L|TRICHOME BIREFRINGENCE-LIKE 22 TRICHOME BIREFRINGENCE-LIKE 22 protein-coding VNsp peak10063 3 10528246 10530929 + promoter-TSS (AT3G28223.1) 372 AT3G28230 AT3G28230 - something about silencing protein protein-coding common peak10069 3 10593412 10594005 + TTS (AT3G28345.1) -3023 AT3G28340 GATL10 GolS8|galactinol synthase 8|galacturonosyltransferase-like 10 galacturonosyltransferase-like 10 protein-coding common peak10070 3 10594122 10594303 + exon (AT3G28345.1, exon 7 of 7) -3527 AT3G28340 GATL10 GolS8|galactinol synthase 8|galacturonosyltransferase-like 10 galacturonosyltransferase-like 10 protein-coding common peak10072 3 10598570 10599585 + promoter-TSS (AT3G28345.1) -35 AT3G28345 ABCB15 ATP-binding cassette B15|MDR13|multi-drug resistance 13 ABC transporter family protein protein-coding common peak10078 3 10624029 10624455 + TTS (AT3G28370.3) 3615 AT3G28370 AT3G28370 - spindle assembly checkpoint component protein-coding common peak10079 3 10628549 10629044 + promoter-TSS (AT3G28380.1) -595 AT3G28380 ABCB17 ATP-binding cassette B17|P-glycoprotein 17|PGP17 P-glycoprotein 17 protein-coding common peak10080 3 10629367 10630076 + exon (AT3G28390.1, exon 7 of 7) -1520 AT3G28380 ABCB17 ATP-binding cassette B17|P-glycoprotein 17|PGP17 P-glycoprotein 17 protein-coding common peak10081 3 10633466 10634370 + promoter-TSS (AT3G28390.1) 49 AT3G28390 ABCB18 ATP-binding cassette B18|P-glycoprotein 18|PGP18 P-glycoprotein 18 protein-coding common peak10083 3 10646643 10647592 + TTS (AT3G28415.2) 4423 AT3G28415 ABCB22 ATP-binding cassette B22 ABC transporter family protein protein-coding common peak10087 3 10678523 10678940 + promoter-TSS (AT3G28480.1) -343 AT3G28480 AT3G28480 - Oxoglutarate/iron-dependent oxygenase protein-coding common peak10088 3 10681988 10682531 + exon (AT3G28500.1, exon 1 of 1) 230 AT3G28500 AT3G28500 - 60S acidic ribosomal protein family protein-coding common peak10093 3 10718400 10719044 + TTS (AT3G28590.1) 402 AT3G28590 AT3G28590 - transmembrane protein protein-coding common peak10096 3 10728867 10729883 + TTS (AT3G28635.1) 424 AT3G28630 AT3G28630 CROLIN 1|CROLIN1 actin cross-linking protein, putative (DUF569) protein-coding common peak10097 3 10733026 10733328 + promoter-TSS (AT3G28640.1) -145 AT3G28640 AT3G28640 - Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding common peak10100 3 10741771 10742289 + Intergenic -1100 AT3G28660 AT3G28660 - Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding VNsp peak10101 3 10743624 10744390 + promoter-TSS (AT3G28670.3) -28 AT3G28670 AT3G28670 - oxidoreductase, zinc-binding dehydrogenase family protein protein-coding common peak10107 3 10791539 10792943 + TTS (AT3G28760.1) 605 AT3G28750 AT3G28750 - hypothetical protein protein-coding VNsp peak10110 3 10814425 10816024 + intron (AT3G28790.1, intron 1 of 2) 475 AT3G28790 AT3G28790 - transmembrane protein, putative (DUF1216) protein-coding VNsp peak10114 3 10849846 10850941 + TTS (AT3G28850.1) 1687 AT3G28853 AT3G28853 - B3 DNA-binding domain protein protein-coding common peak10116 3 10892197 10892668 + promoter-TSS (AT3G28875.1) -372 AT3G28875 AT3G28875 - serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like protein protein-coding common peak10119 3 10902002 10902599 + exon (AT3G28900.1, exon 4 of 4) 116 AT3G28899 AT3G28899 - hypothetical protein protein-coding common peak10120 3 10903502 10904525 + intron (AT3G28900.1, intron 2 of 3) 445 AT3G28900 AT3G28900 - Ribosomal protein L34e superfamily protein protein-coding common peak10129 3 10982219 10983238 + promoter-TSS (AT3G28956.11) 5 AT3G28956 AT3G28956 - RNA polymerase II, Rpb4, core protein protein-coding common peak10131 3 10998235 10998506 + Intergenic -3364 AT3G28980 AT3G28980 - mediator of RNA polymerase II transcription subunit-like protein, putative (DUF1216) protein-coding VNsp peak10138 3 11023766 11024102 + promoter-TSS (AT3G29033.1) -73 AT3G29033 AT3G29033 - glycine-rich protein protein-coding common peak10141 3 11052324 11053037 + promoter-TSS (AT3G29075.1) 76 AT3G29075 AT3G29075 - glycine-rich protein protein-coding common peak10148 3 11099655 11099967 + exon (AT3G29130.4, exon 2 of 2) 3698 AT3G29130 AT3G29130 - kxDL motif protein protein-coding VNsp peak10154 3 11137519 11139866 + promoter-TSS (AT3G29170.1) 288 AT3G29173 AT3G29173 - hypothetical protein protein-coding common peak10158 3 11165681 11166745 + exon (AT3G29200.1, exon 1 of 6) 245 AT3G29200 CM1 ARABIDOPSIS THALIANA CHORISMATE MUTASE 1|ATCM1|chorismate mutase 1 chorismate mutase 1 protein-coding common peak10159 3 11167802 11168002 + Intergenic -1444 AT3G29200 CM1 ARABIDOPSIS THALIANA CHORISMATE MUTASE 1|ATCM1|chorismate mutase 1 chorismate mutase 1 protein-coding VNsp peak10165 3 11227565 11228492 + Intergenic -6145 AT3G29270 AT3G29270 - RING/U-box superfamily protein protein-coding VNsp peak10170 3 11256299 11256517 + exon (AT3G29320.1, exon 11 of 15) 2647 AT3G29330 AT3G29330 - zinc finger RNA-binding-like protein protein-coding VNsp peak10174 3 11279510 11280976 + promoter-TSS (AT3G29375.1) -76 AT3G29375 AT3G29375 - XH domain-containing protein protein-coding common peak10177 3 11294434 11295187 + TTS (AT3G29390.2) 4885 AT3G29400 EXO70E1 ATEXO70E1|exocyst subunit exo70 family protein E1 exocyst subunit exo70 family protein E1 protein-coding VNsp peak10179 3 11335440 11335660 + Intergenic 12881 AT3G29450 AT3G29450 - General transcription factor 2-related zinc finger protein protein-coding VNsp peak10180 3 11344850 11345744 + Intergenic -3432 AT3G29455 AT3G29455 - hypothetical protein protein-coding common peak10181 3 11348174 11348520 + promoter-TSS (AT3G29455.1) -382 AT3G29455 AT3G29455 - hypothetical protein protein-coding VNsp peak10183 3 11362953 11363167 + TTS (AT3G29570.1) 1729 AT3G29570 AT3G29570 - hypothetical protein protein-coding VNsp peak10184 3 11381838 11384563 + intron (AT3G29575.4, intron 2 of 2) 945 AT3G29575 AFP3 ABI five binding protein 3 ABI five binding protein 3 protein-coding common peak10196 3 11496905 11498044 + Intergenic 3945 AT3G29644 AT3G29644 - ncRNA ncRNA VNsp peak10202 3 11534614 11535295 + Intergenic -1926 AT3G29680 AT3G29680 - HXXXD-type acyl-transferase family protein protein-coding common peak10203 3 11555613 11556082 + Intergenic -4478 AT3G29720 AT3G29720 - HXXXD-type acyl-transferase family protein protein-coding common peak10205 3 11589725 11590503 + exon (AT3G29760.3, exon 6 of 7) 1719 AT3G29760 AT3G29760 - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein protein-coding common peak10206 3 11592012 11593109 + promoter-TSS (AT3G29760.3) -189 AT3G29760 AT3G29760 - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein protein-coding common peak10207 3 11600285 11600612 + Intergenic -3371 AT3G29765 AT3G29765 T26G12.24 General transcription factor 2-related zinc finger protein protein-coding common peak10212 3 11657713 11657936 + Intergenic 9533 AT3G29770 MES11 ARABIDOPSIS THALIANA METHYL ESTERASE 11|ATMES11|methyl esterase 11 methyl esterase 11 protein-coding VNsp peak10209 3 11625096 11625531 + Intergenic -12627 AT3G29785 AT3G29785 - Pol-like polyprotein/retrotransposon protein-coding VNsp peak10213 3 11693630 11694073 + promoter-TSS (AT3G29790.1) -229 AT3G29790 AT3G29790 - hypothetical protein protein-coding VNsp peak10214 3 11702675 11703255 + Intergenic -5596 AT3G29796 AT3G29796 - hypothetical protein protein-coding VNsp peak10216 3 11725074 11725426 + Intergenic -2774 AT3G29810 COBL2 COBRA-like protein 2 precursor COBRA-like protein 2 precursor protein-coding common peak10226 3 11820626 11820848 + Intergenic 10011 AT3G30180 BR6OX2 CYP85A2|brassinosteroid-6-oxidase 2 brassinosteroid-6-oxidase 2 protein-coding common peak10228 3 11891927 11892752 + Intergenic -3613 AT3G30247 AT3G30247 - ECA1 gametogenesis family protein (DUF784) protein-coding VNsp peak10241 3 12014853 12015399 + Intergenic 23083 AT3G30387 AT3G30387 - inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (DUF784) protein-coding VNsp peak10237 3 11977643 11978070 + TTS (AT3G30380.2) 1765 AT3G30390 AT3G30390 - Transmembrane amino acid transporter family protein protein-coding common peak10238 3 11978393 11978650 + exon (AT3G30390.2, exon 2 of 6) 1100 AT3G30390 AT3G30390 - Transmembrane amino acid transporter family protein protein-coding common peak10247 3 12276170 12276704 + Intergenic -4711 AT3G30705 AT3G30705 - transmembrane protein protein-coding VNsp peak10248 3 12299423 12299826 + Intergenic -27898 AT3G30705 AT3G30705 - transmembrane protein protein-coding common peak10249 3 12301192 12301919 + Intergenic -29829 AT3G30705 AT3G30705 - transmembrane protein protein-coding VNsp peak10253 3 12348865 12349972 + intron (AT3G30720.2, intron 1 of 2) 371 AT3G30720 QQS QUA-QUINE STARCH qua-quine starch protein-coding VNsp peak10265 3 12489315 12489755 + intron (AT3G30805.1, intron 1 of 1) 390 AT3G30805 AT3G30805 K11J14.1 Class II aminoacyl-tRNA and biotin synthetases superfamily protein protein-coding VNsp peak10266 3 12528935 12529319 + promoter-TSS (AT3G30820.1) -716 AT3G30820 AT3G30820 - retrotransposon ORF-1 protein protein-coding VNsp peak10270 3 12591139 12592070 + exon (AT3G30841.2, exon 1 of 5) 212 AT3G30841 AT3G30841 MJI6.21 Cofactor-independent phosphoglycerate mutase protein-coding common peak10271 3 12593698 12594258 + TTS (AT3G30841.2) 2586 AT3G30841 AT3G30841 MJI6.21 Cofactor-independent phosphoglycerate mutase protein-coding common peak10272 3 12611518 12613293 + Intergenic -11973 AT3G30842 ABCG38 ATP-binding cassette G38|ATPDR10|MJI6.16|PDR10|pleiotropic drug resistance 10 pleiotropic drug resistance 10 protein-coding VNsp peak10273 3 12622788 12623284 + Intergenic 1718 AT3G30845 AT3G30845 - hypothetical protein protein-coding VNsp peak10274 3 12625073 12625731 + promoter-TSS (AT3G30845.1) -648 AT3G30845 AT3G30845 - hypothetical protein protein-coding VNsp peak10279 3 12733712 12733939 + Intergenic 31238 AT3G31350 AT3G31350 - hypothetical protein protein-coding VNsp peak10280 3 12738535 12739173 + Intergenic 34685 AT3G31402 AT3G31402 - General transcription factor 2-related zinc finger protein protein-coding VNsp peak10281 3 12757064 12757500 + Intergenic 16257 AT3G31402 AT3G31402 - General transcription factor 2-related zinc finger protein protein-coding VNsp peak10282 3 12778769 12779656 + Intergenic -5673 AT3G31402 AT3G31402 - General transcription factor 2-related zinc finger protein protein-coding VNsp peak10283 3 12790146 12791714 + Intergenic 5941 AT3G31430 AT3G31430 - zinc knuckle (CCHC-type) family protein protein-coding common peak10285 3 12817575 12818020 + Intergenic -18486 AT3G31550 AT3G31550 - replication protein A1 protein-coding VNsp peak10286 3 12823005 12823504 + Intergenic -13029 AT3G31550 AT3G31550 - replication protein A1 protein-coding VNsp peak10288 3 12910485 12911359 + promoter-TSS (AT3G31910.1) -531 AT3G31910 AT3G31910 - Ulp1 protease family protein (DUF1985) protein-coding VNsp peak10289 3 12929846 12930422 + promoter-TSS (AT3G31925.1) -891 AT3G31925 AT3G31925 - replication protein A 70 kDa DNA-binding subunit B-like protein protein-coding VNsp peak10291 3 12955771 12956866 + Intergenic 6205 AT3G31950 AT3G31950 - nucleic acid-binding/zinc ion-binding protein protein-coding VNsp peak10294 3 13022512 13023236 + Intergenic 12566 AT3G32030 AT3G32030 - Terpenoid cyclases/Protein prenyltransferases superfamily protein protein-coding VNsp peak10295 3 13027835 13028593 + Intergenic 7226 AT3G32030 AT3G32030 - Terpenoid cyclases/Protein prenyltransferases superfamily protein protein-coding VNsp peak10297 3 13064549 13064773 + Intergenic 3613 AT3G32047 AT3G32047 F1M23.15 Cytochrome P450 superfamily protein protein-coding common peak10299 3 13103840 13105010 + Intergenic -23054 AT3G32130 AT3G32130 - non-LTR retroelement reverse transcriptase protein-coding VNsp peak10300 3 13136644 13136915 + Intergenic -6848 AT3G32150 AT3G32150 - myosin heavy chain-like protein protein-coding common peak10301 3 13145060 13145650 + promoter-TSS (AT3G32160.1) -85 AT3G32160 AT3G32160 - hypothetical protein protein-coding VNsp peak10302 3 13155910 13156318 + Intergenic 6673 AT3G32180 AT3G32180 - hypothetical protein protein-coding VNsp peak10303 3 13162218 13163292 + promoter-TSS (AT3G32180.1) 32 AT3G32180 AT3G32180 - hypothetical protein protein-coding VNsp peak10304 3 13176337 13177164 + Intergenic -5223 AT3G32200 AT3G32200 - myosin heavy chain-like protein protein-coding VNsp peak10305 3 13287997 13288222 + Intergenic 12027 AT3G32330 AT3G32330 - DNA repair protein-like protein protein-coding VNsp peak10308 3 13331969 13332335 + Intergenic -16169 AT3G32380 AT3G32380 - Gag-Pol polyprotein/retrotransposon protein-coding VNsp peak10310 3 13384121 13384818 + Intergenic -9002 AT3G32420 AT3G32420 - actin-binding FH2 (formin-like) protein protein-coding VNsp peak10311 3 13449224 13449436 + Intergenic 3477 AT3G32904 AT3G32904 - Myb/SANT-like DNA-binding domain protein protein-coding VNsp peak10315 3 13493216 13494824 + promoter-TSS (AT3G32940.1) -186 AT3G32940 AT3G32940 - RNA-binding KH domain-containing protein protein-coding common peak10330 3 13983382 13983674 + Intergenic 37864 AT3G33187 AT3G33187 - Defensin-like (DEFL) family protein protein-coding VNsp peak10331 3 13992373 13992833 + Intergenic 28789 AT3G33187 AT3G33187 - Defensin-like (DEFL) family protein protein-coding VNsp peak10332 3 14021624 14022548 + promoter-TSS (AT3G33187.1) -694 AT3G33187 AT3G33187 - Defensin-like (DEFL) family protein protein-coding VNsp peak10334 3 14050632 14051459 + Intergenic 12685 AT3G33494 AT3G33494 - hypothetical protein protein-coding VNsp peak10337 3 14095092 14097199 + promoter-TSS (AT3G33520.1) -557 AT3G33520 ARP6 ATARP6|EARLY IN SHORT DAYS 1|ESD1|SUF3|SUPPRESSOR OF FRI 3|actin-related protein 6 actin-related protein 6 protein-coding common peak10335 3 14065096 14066230 + Intergenic 18353 AT3G33528 AT3G33528 - hypothetical protein protein-coding VNsp peak10336 3 14084821 14086844 + exon (AT3G33530.2, exon 1 of 22) 478 AT3G33530 AT3G33530 - Transducin family protein / WD-40 repeat family protein protein-coding common peak8516 3 2100610 2101014 + exon (AT3G36659.1, exon 1 of 1) 791 AT3G36659 AT3G36659 - Plant invertase/pectin methylesterase inhibitor superfamily protein protein-coding common peak10338 3 14191977 14196200 + Intergenic -1829 AT3G41761 AT3G41761 - ncRNA ncRNA common peak10341 3 14199573 14199769 + promoter-TSS (AT3G06355.1) -82 AT3G41979 AT3G41979 68121.RRNA00002 5.8S ribosomal RNA rRNA common peak10347 3 14232739 14233608 + exon (AT3G42050.1, exon 1 of 12) 268 AT3G42050 AT3G42050 - vacuolar ATP synthase subunit H family protein protein-coding common peak10348 3 14238516 14239868 + Intergenic -5751 AT3G42050 AT3G42050 - vacuolar ATP synthase subunit H family protein protein-coding common peak10349 3 14245174 14245799 + Intergenic 8783 AT3G42060 AT3G42060 - myosin heavy chain-like protein protein-coding common peak10350 3 14255167 14255369 + promoter-TSS (AT3G42060.1) -999 AT3G42060 AT3G42060 - myosin heavy chain-like protein protein-coding VNsp peak10351 3 14273344 14273570 + Intergenic -19188 AT3G42060 AT3G42060 - myosin heavy chain-like protein protein-coding VNsp peak10352 3 14285055 14285452 + Intergenic -12678 AT3G42075 AT3G42075 - transmembrane protein protein-coding VNsp peak10353 3 14297685 14299597 + intron (AT3G42075.2, intron 1 of 3) 242 AT3G42130 AT3G42130 - glycine-rich protein protein-coding VNsp peak10354 3 14305345 14305739 + Intergenic -2524 AT3G42140 AT3G42140 - zinc ion binding / nucleic acid binding protein protein-coding VNsp peak10355 3 14305998 14306367 + Intergenic 1987 AT3G42148 AT3G42148 - hypothetical protein protein-coding VNsp peak10356 3 14308788 14309960 + promoter-TSS (AT3G42150.1) 99 AT3G42150 AT3G42150 - transmembrane protein protein-coding common peak10360 3 14417852 14419245 + Intergenic -41270 AT3G42310 AT3G42310 - hypothetical protein protein-coding VNsp peak10361 3 14461832 14462808 + TTS (AT3G42310.1) 2502 AT3G42310 AT3G42310 - hypothetical protein protein-coding VNsp peak10362 3 14477136 14477959 + Intergenic 17729 AT3G42310 AT3G42310 - hypothetical protein protein-coding VNsp peak10363 3 14494212 14494670 + Intergenic 24026 AT3G42390 AT3G42390 - hypothetical protein protein-coding VNsp peak10364 3 14514590 14515528 + Intergenic 3408 AT3G42390 AT3G42390 - hypothetical protein protein-coding VNsp peak10365 3 14587161 14588916 + Intergenic -19042 AT3G42473 LCR47 low-molecular-weight cysteine-rich 47 low-molecular-weight cysteine-rich 47 protein-coding VNsp peak10366 3 14591532 14592066 + Intergenic -15281 AT3G42473 LCR47 low-molecular-weight cysteine-rich 47 low-molecular-weight cysteine-rich 47 protein-coding VNsp peak10367 3 14623375 14624002 + Intergenic 16608 AT3G42473 LCR47 low-molecular-weight cysteine-rich 47 low-molecular-weight cysteine-rich 47 protein-coding VNsp peak10368 3 14627405 14627739 + Intergenic 20492 AT3G42473 LCR47 low-molecular-weight cysteine-rich 47 low-molecular-weight cysteine-rich 47 protein-coding VNsp peak10371 3 14675747 14676512 + Intergenic -4136 AT3G42560 AT3G42560 - Pentatricopeptide repeat (PPR) superfamily protein protein-coding VNsp peak10372 3 14681680 14682294 + Intergenic 1423 AT3G42565 AT3G42565 - ECA1 gametogenesis related family protein protein-coding VNsp peak10373 3 14687070 14688429 + Intergenic -1309 AT3G42570 AT3G42570 - peroxidase family protein protein-coding VNsp peak10379 3 14750267 14752123 + promoter-TSS (AT3G42660.1) -85 AT3G42660 AT3G42660 - transducin family protein / WD-40 repeat family protein protein-coding common peak10381 3 14764662 14765871 + Intergenic -4637 AT3G42670 CHR38 CLASSY 1|CLASSY1|CLSY|CLSY1|chromatin remodeling 38 chromatin remodeling 38 protein-coding VNsp peak10384 3 14842925 14844837 + promoter-TSS (AT3G42725.1) -163 AT3G42725 AT3G42725 - Putative membrane lipoprotein protein-coding common peak10385 3 14859703 14859972 + Intergenic -7285 AT3G42770 AT3G42770 - F-box/RNI-like/FBD-like domains-containing protein protein-coding VNsp peak10387 3 14880570 14880883 + promoter-TSS (AT3G42790.1) -934 AT3G42790 AL3 alfin-like 3 alfin-like 3 protein-coding VNsp peak10388 3 14904627 14905098 + promoter-TSS (AT3G42800.1) -368 AT3G42800 AT3G42800 - AF-like protein protein-coding VNsp peak10389 3 14911478 14912021 + Intergenic 6519 AT3G42800 AT3G42800 - AF-like protein protein-coding VNsp peak10390 3 14916834 14917531 + Intergenic 11952 AT3G42800 AT3G42800 - AF-like protein protein-coding common peak10391 3 14927551 14927778 + Intergenic 3014 AT3G42830 AT3G42830 - RING/U-box superfamily protein protein-coding VNsp peak10392 3 14939354 14940086 + TTS (AT3G42850.1) 5571 AT3G42850 AT3G42850 - Mevalonate/galactokinase family protein protein-coding VNsp peak10393 3 14945390 14946378 + promoter-TSS (AT3G42850.1) -565 AT3G42850 AT3G42850 - Mevalonate/galactokinase family protein protein-coding common peak10395 3 14954008 14957045 + exon (AT3G42880.1, exon 1 of 2) 1163 AT3G42880 PRK3 pollen receptor like kinase 3 Leucine-rich repeat protein kinase family protein protein-coding VNsp peak10396 3 14962248 14962804 + Intergenic 8163 AT3G42880 PRK3 pollen receptor like kinase 3 Leucine-rich repeat protein kinase family protein protein-coding VNsp peak10397 3 14973490 14973725 + Intergenic 19244 AT3G42880 PRK3 pollen receptor like kinase 3 Leucine-rich repeat protein kinase family protein protein-coding common peak10398 3 14991431 14991644 + Intergenic -15076 AT3G42940 AT3G42940 - C3HC4-type RING finger protein protein-coding VNsp peak10399 3 15005728 15007223 + promoter-TSS (AT3G42940.1) -138 AT3G42940 AT3G42940 - C3HC4-type RING finger protein protein-coding VNsp peak10402 3 15055752 15056013 + Intergenic 4224 AT3G42995 AT3G42995 - transmembrane protein protein-coding VNsp peak10403 3 15065147 15065601 + Intergenic 11883 AT3G43083 LCR33 low-molecular-weight cysteine-rich 33 low-molecular-weight cysteine-rich 33 protein-coding VNsp peak10404 3 15071620 15071840 + Intergenic 5527 AT3G43083 LCR33 low-molecular-weight cysteine-rich 33 low-molecular-weight cysteine-rich 33 protein-coding common peak10408 3 15132755 15133636 + Intergenic -6800 AT3G43148 AT3G43148 - myosin heavy chain-like protein protein-coding VNsp peak10409 3 15162789 15163289 + Intergenic -3522 AT3G43160 MEE38 maternal effect embryo arrest 38 maternal effect embryo arrest 38 protein-coding VNsp peak10410 3 15172559 15173561 + promoter-TSS (AT3G43170.1) -306 AT3G43170 AT3G43170 - hypothetical protein protein-coding VNsp peak10413 3 15195860 15196894 + TTS (AT3G43210.2) 5459 AT3G43210 TES ARABIDOPSIS NPK1-ACTIVATING KINESIN 2|ATNACK2|NACK2|NPK1-ACTIVATING KINESIN 2|TETRASPORE ATP binding microtubule motor family protein protein-coding VNsp peak10415 3 15209396 15210370 + TTS (AT3G43240.1) 2516 AT3G43230 AT3G43230 - RING/FYVE/PHD-type zinc finger family protein protein-coding common peak10416 3 15214303 15215354 + exon (AT3G43240.1, exon 1 of 16) 119 AT3G43240 AT3G43240 - ARID/BRIGHT DNA-binding domain-containing protein protein-coding common peak10418 3 15231190 15232321 + promoter-TSS (AT3G06575.1) 353 AT3G43291 AT3G43291 - hypothetical protein protein-coding VNsp peak10421 3 15244735 15245979 + promoter-TSS (AT3G43300.3) -76 AT3G43300 ATMIN7 BEN1|BFA-VISUALIZED ENDOCYTIC TRAFFICKING DEFECTIVE1|HOPM interactor 7|MIN7 HOPM interactor 7 protein-coding common peak10422 3 15270570 15270916 + Intergenic 15108 AT3G43340 AT3G43340 - Pseudouridine synthase family protein protein-coding VNsp peak10423 3 15275748 15277549 + Intergenic 9203 AT3G43340 AT3G43340 - Pseudouridine synthase family protein protein-coding common peak10426 3 15344202 15344490 + promoter-TSS (AT3G43420.1) -969 AT3G43420 AT3G43420 - hypothetical protein protein-coding common peak10427 3 15354871 15355313 + exon (AT3G43430.1, exon 1 of 1) 402 AT3G43430 AT3G43430 - RING/U-box superfamily protein protein-coding common peak10429 3 15375536 15376351 + Intergenic 8347 AT3G43440 JAZ11 TIFY3A|jasmonate-zim-domain protein 11 jasmonate-zim-domain protein 11 protein-coding VNsp peak10430 3 15384437 15385052 + Intergenic 8537 AT3G43470 AT3G43470 - zinc ion binding / nucleic acid binding protein protein-coding VNsp peak10432 3 15421602 15423449 + Intergenic -8135 AT3G43540 AT3G43540 - initiation factor 4F subunit (DUF1350) protein-coding VNsp peak10434 3 15437929 15438787 + Intergenic 7698 AT3G43540 AT3G43540 - initiation factor 4F subunit (DUF1350) protein-coding VNsp peak10435 3 15491719 15491987 + Intergenic -10163 AT3G43580 AT3G43580 - Beta-galactosidase related protein protein-coding VNsp peak10440 3 15531187 15531436 + Intergenic -7215 AT3G43610 AT3G43610 - Spc97 / Spc98 family of spindle pole body (SBP) component protein-coding VNsp peak10441 3 15555090 15555932 + Intergenic -4890 AT3G43645 AT3G43645 - hypothetical protein protein-coding common peak10443 3 15598089 15599779 + Intergenic -2820 AT3G43700 BPM6 ATBPM6|BTB-POZ AND MATH DOMAIN 6|BTB-POZ and MATH domain 6 BTB-POZ and MATH domain 6 protein-coding common peak10444 3 15601464 15601742 + promoter-TSS (AT3G43700.3) -151 AT3G43700 BPM6 ATBPM6|BTB-POZ AND MATH DOMAIN 6|BTB-POZ and MATH domain 6 BTB-POZ and MATH domain 6 protein-coding common peak10447 3 15618880 15620110 + Intergenic -2186 AT3G43720 LTPG2 glycosylphosphatidylinositol-anchored lipid protein transfer 2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein protein-coding VNsp peak10448 3 15639444 15639961 + Intergenic -4307 AT3G43740 AT3G43740 - Leucine-rich repeat (LRR) family protein protein-coding VNsp peak10449 3 15645774 15646492 + promoter-TSS (AT3G43750.1) -327 AT3G43750 AT3G43750 - RING/U-box protein with C6HC-type zinc finger domain-containing protein protein-coding VNsp peak10451 3 15664130 15664440 + TTS (AT3G43810.3) 1195 AT3G43810 CAM7 AtCAM7|CALMODULIN 7|Z-box Binding Factor 3|ZBF3|calmodulin 7 calmodulin 7 protein-coding common peak10453 3 15672540 15672956 + Intergenic -6279 AT3G43810 CAM7 AtCAM7|CALMODULIN 7|Z-box Binding Factor 3|ZBF3|calmodulin 7 calmodulin 7 protein-coding common peak10457 3 15706757 15710972 + exon (AT3G43860.2, exon 7 of 9) 1910 AT3G43860 GH9A4 AtGH9A4|glycosyl hydrolase 9A4 glycosyl hydrolase 9A4 protein-coding VNsp peak10458 3 15716529 15717600 + Intergenic 10110 AT3G43860 GH9A4 AtGH9A4|glycosyl hydrolase 9A4 glycosyl hydrolase 9A4 protein-coding common peak10459 3 15752910 15753410 + promoter-TSS (AT3G43920.4) -227 AT3G43920 DCL3 ATDCL3|DICER-LIKE 3|dicer-like 3 dicer-like 3 protein-coding VNsp peak10460 3 15762649 15763638 + exon (AT3G43930.1, exon 1 of 10) 187 AT3G43930 AT3G43930 - BRCT domain-containing DNA repair protein protein-coding VNsp peak10462 3 15779110 15779714 + promoter-TSS (AT3G43980.1) -52 AT3G43980 AT3G43980 - Ribosomal protein S14p/S29e family protein protein-coding common peak10463 3 15785827 15786136 + promoter-TSS (AT3G43990.1) -797 AT3G43990 AT3G43990 - Bromo-adjacent homology (BAH) domain-containing protein protein-coding common peak10464 3 15791563 15793501 + Intergenic -3601 AT3G44006 AT3G44006 - hypothetical protein protein-coding VNsp peak10466 3 15818164 15819248 + exon (AT3G44050.1, exon 1 of 21) 195 AT3G44050 AT3G44050 F26G5.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein protein-coding common peak10470 3 15863445 15863892 + Intergenic 3866 AT3G44100 AT3G44100 - MD-2-related lipid recognition domain-containing protein protein-coding VNsp peak10471 3 15869831 15871523 + intron (AT3G44110.1, intron 1 of 5) 579 AT3G44110 J3 ATJ|ATJ3|DNAJ homologue 3 DNAJ homologue 3 protein-coding common peak10472 3 15887266 15888273 + exon (AT3G44150.1, exon 1 of 3) 279 AT3G44150 AT3G44150 - Expp1 protein protein-coding common peak10473 3 15902975 15904136 + promoter-TSS (AT3G44190.1) 53 AT3G44190 AT3G44190 - FAD/NAD(P)-binding oxidoreductase family protein protein-coding common peak10486 3 16006337 16006644 + promoter-TSS (AT3G44330.1) -18 AT3G44330 AT3G44330 - M28 Zn-peptidase nicastrin protein-coding common peak10487 3 16010849 16011616 + TTS (AT3G44340.4) 4724 AT3G44330 AT3G44330 - M28 Zn-peptidase nicastrin protein-coding common peak10488 3 16018874 16020763 + exon (AT3G44340.4, exon 3 of 26) 491 AT3G44340 CEF clone eighty-four hypothetical protein protein-coding common peak10492 3 16048602 16050630 + promoter-TSS (AT3G44405.3) 52 AT3G44400 AT3G44400 - Disease resistance protein (TIR-NBS-LRR class) family protein-coding common peak10495 3 16067707 16070826 + promoter-TSS (AT3G44435.1) -220 AT3G44435 AT3G44435 - hypothetical protein protein-coding common peak10496 3 16111945 16113146 + Intergenic -1229 AT3G44510 AT3G44510 - alpha/beta-Hydrolases superfamily protein protein-coding common peak10497 3 16114255 16115927 + promoter-TSS (AT3G44530.2) -407 AT3G44530 HIRA homolog of histone chaperone HIRA histone chaperone HIRA-like protein protein-coding common peak10498 3 16121048 16121744 + TTS (AT3G44530.1) -2030 AT3G44540 FAR4 fatty acid reductase 4 fatty acid reductase 4 protein-coding common peak10502 3 16142707 16143431 + TTS (AT3G44550.1) -1596 AT3G44555 AT3G44555 - hypothetical protein protein-coding VNsp peak10507 3 16186616 16187173 + Intergenic 5471 AT3G44610 AT3G44610 - Protein kinase superfamily protein protein-coding common peak10509 3 16192498 16194202 + promoter-TSS (AT3G44620.1) -324 AT3G44620 AT3G44620 - protein-tyrosine phosphatase protein-coding common peak10511 3 16229063 16230939 + promoter-TSS (AT3G44680.1) 8 AT3G44680 HDA9 AtHDA9|HDA09|HISTONE DEACETYLASE|histone deacetylase 9 histone deacetylase 9 protein-coding common peak10513 3 16243722 16245140 + promoter-TSS (AT3G44704.1) -83 AT3G44704 AT3G44704 - hypothetical protein protein-coding common peak10515 3 16284927 16286316 + promoter-TSS (AT3G44730.4) -120 AT3G44730 KP1 ARABIDOPSIS KINESIN-LIKE PROTEIN 1|ATKP1|AtKIN14h|kinesin-like protein 1 kinesin-like protein 1 protein-coding common peak10518 3 16301748 16303034 + promoter-TSS (AT3G44753.2) 389 AT3G44753 AT3G44753 - transmembrane protein protein-coding common peak10544 3 16455548 16456138 + Intergenic -4260 AT3G45000 VPS24.2 VPS24 SNF7 family protein protein-coding VNsp peak10545 3 16459842 16460140 + promoter-TSS (AT3G45000.1) -112 AT3G45000 VPS24.2 VPS24 SNF7 family protein protein-coding common peak10547 3 16472224 16472902 + promoter-TSS (AT3G45030.1) -154 AT3G45030 AT3G45030 - Ribosomal protein S10p/S20e family protein protein-coding common peak10554 3 16501653 16501866 + Intergenic -2555 AT3G45100 SETH2 - UDP-Glycosyltransferase superfamily protein protein-coding common peak10559 3 16539103 16540458 + promoter-TSS (AT3G45180.1) -536 AT3G45180 AT3G45180 - Ubiquitin-like superfamily protein protein-coding common peak10562 3 16559131 16559767 + Intergenic -1280 AT3G45210 AT3G45210 - transcription initiation factor TFIID subunit (Protein of unknown function, DUF584) protein-coding common peak10564 3 16568330 16569572 + promoter-TSS (AT3G45230.1) -100 AT3G45230 AT3G45230 APAP1|ARABINOXYLAN PECTIN ARABINOGALACTAN PROTEIN 1 hydroxyproline-rich glycoprotein family protein protein-coding common peak10576 3 16666606 16667658 + promoter-TSS (AT3G45440.1) -248 AT3G45440 AT3G45440 L-type lectin receptor kinase I.6|LecRK-I.6 Concanavalin A-like lectin protein kinase family protein protein-coding common peak10577 3 16669057 16669932 + exon (AT3G45443.1, exon 1 of 3) 114 AT3G45443 AT3G45443 - hypothetical protein protein-coding common peak10579 3 16682388 16683087 + TTS (AT3G45480.1) -1476 AT3G45470 AT3G45470 - IBR domain containing protein protein-coding VNsp peak10589 3 16737156 16737628 + Intergenic -1441 AT3G45600 TET3 tetraspanin3 tetraspanin3 protein-coding common peak10591 3 16745444 16746103 + promoter-TSS (AT3G45620.2) -100 AT3G45620 AT3G45620 - Transducin/WD40 repeat-like superfamily protein protein-coding common peak10600 3 16797324 16798192 + promoter-TSS (AT3G45750.3) 175 AT3G45750 AT3G45750 - Nucleotidyltransferase family protein protein-coding common peak10601 3 16806960 16808234 + exon (AT3G45770.2, exon 1 of 10) 198 AT3G45770 AT3G45770 F16L2.2 Polyketide synthase, enoylreductase family protein protein-coding common peak10604 3 16819927 16820527 + intron (AT3G45780.2, intron 2 of 19) 1880 AT3G45780 PHOT1 F16L2.3|JK224|NONPHOTOTROPIC HYPOCOTYL 1|NPH1|PHOTOTROPIN|ROOT PHOTOTROPISM 1|RPT1|phototropin 1 phototropin 1 protein-coding common peak10606 3 16840355 16842142 + promoter-TSS (AT3G45820.1) -265 AT3G45820 AT3G45820 - hypothetical protein protein-coding common peak10622 3 16950174 16951632 + promoter-TSS (AT3G46150.1) -52 AT3G46160 AT3G46160 - Protein kinase superfamily protein protein-coding common peak10628 3 16989802 16990207 + Intergenic -1940 AT3G46240 AT3G46240 - ER protein carbohydrate-binding protein protein-coding common peak10632 3 17010257 17011157 + Intergenic -1793 AT3G46290 HERK1 hercules receptor kinase 1 hercules receptor kinase 1 protein-coding common peak10635 3 17030557 17031419 + intron (AT3G46340.1, intron 11 of 12) 4330 AT3G46340 AT3G46340 - Leucine-rich repeat protein kinase family protein protein-coding common peak10641 3 17071166 17072103 + promoter-TSS (AT3G46390.1) 49 AT3G46390 AT3G46390 - NAC domain protein protein-coding VNsp peak10642 3 17079591 17079990 + intron (AT3G46410.1, intron 3 of 4) 697 AT3G46410 AT3G46410 - Protein kinase superfamily protein protein-coding VNsp peak10646 3 17086937 17087849 + promoter-TSS (AT3G46430.1) -145 AT3G46430 AT3G46430 - ATP synthase protein-coding common peak10665 3 17202160 17202899 + promoter-TSS (AT3G46700.1) -455 AT3G46700 AT3G46700 - UDP-Glycosyltransferase superfamily protein protein-coding VNsp peak10677 3 17277812 17279038 + promoter-TSS (AT3G46910.1) -117 AT3G46910 AT3G46910 - Cullin family protein protein-coding common peak10682 3 17310787 17311059 + promoter-TSS (AT3G46980.1) -749 AT3G46990 AT3G46990 - DUF740 family protein, putative (DUF740) protein-coding common peak10685 3 17321344 17321569 + promoter-TSS (AT3G47030.1) -663 AT3G47030 AT3G47030 - F-box and associated interaction domains-containing protein protein-coding common peak10688 3 17332001 17333224 + promoter-TSS (AT3G47060.1) -314 AT3G47060 ftsh7 FTSH protease 7 FTSH protease 7 protein-coding common peak10691 3 17352163 17354877 + promoter-TSS (AT3G47120.2) -194 AT3G47130 AT3G47130 - F-box associated ubiquitination effector family protein protein-coding common peak10695 3 17375438 17377231 + promoter-TSS (AT3G47190.1) -280 AT3G47190 AT3G47190 - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein protein-coding common peak10696 3 17380591 17381610 + Intergenic -1705 AT3G47200 AT3G47200 - transmembrane protein, putative (DUF247) protein-coding common peak10698 3 17392486 17393458 + Intergenic 5089 AT3G47220 PLC9 ATPLC9|phosphatidylinositol-specific phospholipase C9|phosphatidylinositol-speciwc phospholipase C9 phosphatidylinositol-speciwc phospholipase C9 protein-coding common peak10710 3 17450357 17450690 + promoter-TSS (AT3G47360.1) -329 AT3G47360 HSD3 ATHSD3|HYDROXYSTEROID DEHYDROGENASE 3|hydroxysteroid dehydrogenase 3 hydroxysteroid dehydrogenase 3 protein-coding common peak10719 3 17486144 17486893 + promoter-TSS (AT3G47450.2) -26 AT3G47460 ATSMC2 - Structural maintenance of chromosomes (SMC) family protein protein-coding common peak10721 3 17497709 17498806 + promoter-TSS (AT3G47490.3) -22 AT3G47490 AT3G47490 - HNH endonuclease protein-coding common peak10726 3 17516656 17516859 + TTS (AT3G47530.1) 2548 AT3G47530 AT3G47530 - Pentatricopeptide repeat (PPR) superfamily protein protein-coding VNsp peak10727 3 17517306 17517769 + exon (AT3G47530.1, exon 1 of 1) 1768 AT3G47530 AT3G47530 - Pentatricopeptide repeat (PPR) superfamily protein protein-coding common peak10741 3 17586356 17586914 + promoter-TSS (AT3G47700.1) 72 AT3G47700 MAG2 maigo2 RINT-1 / TIP-1 family protein-coding common peak10752 3 17645513 17647283 + promoter-TSS (AT3G47830.1) -606 AT3G47830 AT3G47830 T23J7.2 DNA glycosylase superfamily protein protein-coding common peak10755 3 17655332 17656339 + TTS (AT3G47860.1) 178 AT3G47850 AT3G47850 - tRNA (Ile)-lysidine synthase protein-coding common peak10757 3 17662958 17663417 + Intergenic -1833 AT3G47870 LBD27 ASL29|ASYMMETRIC LEAVES 2-like 29|LOB domain-containing protein 27|SCP|SIDECAR POLLEN LOB domain-containing protein 27 protein-coding VNsp peak10758 3 17672908 17674451 + TTS (AT3G47910.2) 133 AT3G47890 AT3G47890 - Ubiquitin carboxyl-terminal hydrolase-related protein protein-coding common peak10767 3 17739393 17741170 + promoter-TSS (AT3G48050.2) -411 AT3G48050 SUO 'shuttle' in chinese protein SUO protein-coding common peak10769 3 17748380 17749692 + promoter-TSS (AT3G48060.2) -251 AT3G48060 AT3G48060 - BAH and TFIIS domain-containing protein protein-coding common peak10771 3 17758218 17758987 + promoter-TSS (AT3G48090.1) -455 AT3G48090 EDS1 ATEDS1|EDS1 PROTEIN|enhanced disease susceptibility 1 alpha/beta-Hydrolases superfamily protein protein-coding common peak10775 3 17778040 17778972 + intron (AT3G48140.1, intron 1 of 2) 224 AT3G48140 AT3G48140 - B12D protein protein-coding common peak10806 3 17943065 17944062 + TTS (AT3G48450.1) 1543 AT3G48450 AT3G48450 - RPM1-interacting protein 4 (RIN4) family protein protein-coding common peak10807 3 17944314 17945120 + TTS (AT3G48440.1) 389 AT3G48450 AT3G48450 - RPM1-interacting protein 4 (RIN4) family protein protein-coding common peak10817 3 18001560 18001832 + exon (AT3G48560.1, exon 1 of 1) 2053 AT3G48560 CSR1 ACETOHYDROXY ACID SYNTHASE|ACETOLACTATE SYNTHASE|AHAS|ALS|IMIDAZOLE RESISTANT 1|IMR1|TRIAZOLOPYRIMIDINE RESISTANT 5|TZP5|chlorsulfuron/imidazolinone resistant 1 chlorsulfuron/imidazolinone resistant 1 protein-coding common peak10830 3 18069004 18069291 + promoter-TSS (AT3G48745.1) 69 AT3G48745 AT3G48745 67264.TRNA-GLN-1 tRNA tRNA common peak10833 3 18088786 18090214 + intron (AT3G48780.1, intron 1 of 12) 480 AT3G48780 SPT1 ATSPT1|SERINE PALMITOYLTRANSFERASE 1|serine palmitoyltransferase 1 serine palmitoyltransferase 1 protein-coding common peak10850 3 18187140 18188078 + promoter-TSS (AT3G49055.1) -641 AT3G49055 AT3G49055 - ATP-binding protein protein-coding VNsp peak10854 3 18206112 18207919 + promoter-TSS (AT3G49120.1) -636 AT3G49120 PRXCB ARABIDOPSIS THALIANA PEROXIDASE CB|ATPCB|ATPERX34|F2K15.3|PEROXIDASE 34|PERX34|PRX34|peroxidase CB peroxidase CB protein-coding common peak10858 3 18224222 18225492 + promoter-TSS (AT3G49160.3) 28 AT3G49160 AT3G49160 - pyruvate kinase family protein protein-coding common peak10863 3 18255736 18256523 + TTS (AT3G49230.1) 168 AT3G49240 emb1796 embryo defective 1796 Pentatricopeptide repeat (PPR) superfamily protein protein-coding common peak10874 3 18310899 18312564 + TTS (AT3G49380.1) 1890 AT3G49380 iqd15 IQ-domain 15 IQ-domain 15 protein-coding common peak10875 3 18323668 18325461 + promoter-TSS (AT3G49400.2) -44 AT3G49400 AT3G49400 - Transducin/WD40 repeat-like superfamily protein protein-coding common peak10883 3 18359425 18359737 + promoter-TSS (AT3G49520.1) -3 AT3G49520 AT3G49520 - F-box and associated interaction domains-containing protein protein-coding common peak10884 3 18364588 18366400 + promoter-TSS (AT3G49540.1) -184 AT3G49540 AT3G49540 - hypothetical protein protein-coding VNsp peak10924 3 18583885 18584804 + TTS (AT3G50120.1) 469 AT3G50110 PEN3 ATPEN3|Arabidopsis thaliana phosphatase and TENsin homolog deleted on chromosome ten 3|PTEN 3|PTEN2B|phosphatase and TENsin homolog deleted on chromosome ten 2B PTEN 3 protein-coding common peak10928 3 18600157 18600457 + exon (AT3G50160.1, exon 1 of 3) 702 AT3G50160 AT3G50160 - transmembrane protein, putative (DUF247) protein-coding common peak10931 3 18611813 18612163 + promoter-TSS (AT3G50190.2) -725 AT3G50190 AT3G50190 - transmembrane protein, putative (DUF247) protein-coding VNsp peak10944 3 18683706 18685620 + promoter-TSS (AT3G50370.1) -286 AT3G50370 AT3G50370 - hypothetical protein protein-coding common peak10945 3 18694442 18695001 + exon (AT3G50380.3, exon 10 of 37) 5812 AT3G50380 AT3G50380 - vacuolar protein sorting-associated protein, putative (DUF1162) protein-coding common peak10953 3 18740800 18741534 + TTS (AT3G50500.2) 2990 AT3G50500 SNRK2.2 PROTEIN KINASE|SNF1-RELATED PROTEIN KINASE 2-2|SNF1-related protein kinase 2.2|SNRK2-2|SPK-2-2|SRK2D SNF1-related protein kinase 2.2 protein-coding common peak10959 3 18770768 18771438 + promoter-TSS (AT3G50590.1) 84 AT3G50590 AT3G50590 AT3G50600 Transducin/WD40 repeat-like superfamily protein protein-coding common peak10964 3 18796028 18796462 + Intergenic -4061 AT3G50630 KRP2 ICK2|KIP-RELATED PROTEIN 2|KIP-related protein 2 KIP-related protein 2 protein-coding VNsp peak10965 3 18799989 18800625 + promoter-TSS (AT3G50630.2) 1 AT3G50630 KRP2 ICK2|KIP-RELATED PROTEIN 2|KIP-related protein 2 KIP-related protein 2 protein-coding common peak10998 3 18968912 18969403 + promoter-TSS (AT3G51070.2) 89 AT3G51070 AT3G51070 - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein protein-coding common peak11025 3 19097982 19099934 + exon (AT3G51470.2, exon 1 of 2) 317 AT3G51470 AT3G51470 - Protein phosphatase 2C family protein protein-coding common peak11030 3 19141746 19142511 + promoter-TSS (AT3G51610.1) -3 AT3G51610 NPU NO PRIMEXINE AND PLASMA MEMBRANE UNDULATION|T18N14.2 ATP-dependent helicase/deoxyribonuclease subunit B protein-coding common peak11032 3 19148481 19149181 + promoter-TSS (AT3G51630.1) -40 AT3G51630 WNK5 ATWNK5|ZIK1|with no lysine (K) kinase 5 with no lysine (K) kinase 5 protein-coding common peak11035 3 19164340 19166783 + promoter-TSS (AT3G51660.1) -239 AT3G51660 AT3G51660 - Tautomerase/MIF superfamily protein protein-coding common peak11043 3 19203058 19204751 + exon (AT3G51770.1, exon 2 of 5) 560 AT3G51770 ETO1 ARABIDOPSIS ETHYLENE OVERPRODUCER 1|ATEOL1|ETHYLENE OVERPRODUCER 1|ETHYLENE OVERPRODUCER1 tetratricopeptide repeat (TPR)-containing protein protein-coding common peak11047 3 19218857 19219516 + promoter-TSS (AT3G51830.1) -58 AT3G51820 G4 ATG4|CHLG|PDE325|PIGMENT DEFECTIVE 325 UbiA prenyltransferase family protein protein-coding common peak11054 3 19245004 19245753 + intron (AT3G51870.1, intron 5 of 9) 1476 AT3G51870 AT3G51870 - Mitochondrial substrate carrier family protein protein-coding VNsp peak11068 3 19304591 19305354 + promoter-TSS (AT3G52040.1) 8 AT3G52050 AT3G52050 - 5'-3' exonuclease family protein protein-coding common peak11071 3 19318541 19319654 + promoter-TSS (AT3G52100.3) 3 AT3G52090 NRPB11 ATRPB13.6|NRPD11|NRPE11|RNA POLYMERASE II 13.6 KDA SUBUNIT DNA-directed RNA polymerase, RBP11-like protein protein-coding common peak11075 3 19332158 19333279 + promoter-TSS (AT3G52140.2) -110 AT3G52140 NOXY38 FMT|FRIENDLY|FRIENDLY MITOCHONDRIA|non responding to oxylipins 38 tetratricopeptide repeat (TPR)-containing protein protein-coding common peak11119 3 19547653 19548950 + promoter-TSS (AT3G52748.1) -671 AT3G52748 AT3G52748 - ncRNA ncRNA common peak11160 3 19764938 19765405 + TTS (AT3G53305.1) 1553 AT3G53305 CYP71B32 ''cytochrome P450|cytochrome P450|family 71|polypeptide 32|polypeptide 32''|subfamily B cytochrome P450, family 71, subfamily B, polypeptide 32 protein-coding VNsp peak11185 3 19897127 19898234 + promoter-TSS (AT3G53680.2) -268 AT3G53680 AT3G53680 - Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein protein-coding common peak11200 3 19952652 19953518 + promoter-TSS (AT3G53880.1) -32 AT3G53880 AKR4C11 Aldo-keto reductase family 4 member C11 NAD(P)-linked oxidoreductase superfamily protein protein-coding common peak11223 3 20098636 20099197 + exon (AT3G54280.2, exon 17 of 31) 6940 AT3G54280 RGD3 ATBTAF1|BTAF1|CHA16|CHR16|ROOT GROWTH DEFECTIVE 3 ROOT GROWTH DEFECTIVE 3 protein-coding VNsp peak11227 3 20126427 20127076 + promoter-TSS (AT3G54350.5) 147 AT3G54350 emb1967 embryo defective 1967 Forkhead-associated (FHA) domain-containing protein protein-coding common peak11232 3 20151851 20152547 + exon (AT3G54440.3, exon 11 of 17) -3978 AT3G54430 SRS6 SHI-related sequence 6|T14E10.2 SHI-related sequence 6 protein-coding VNsp peak11237 3 20180238 20180714 + promoter-TSS (AT3G54510.6) 190 AT3G54510 AT3G54510 - Early-responsive to dehydration stress protein (ERD4) protein-coding common peak11255 3 20274567 20274798 + exon (AT3G54770.3, exon 5 of 5) 1142 AT3G54770 ARP1 ABA-regulated RNA-binding protein 1 RNA-binding (RRM/RBD/RNP motifs) family protein protein-coding common peak11257 3 20285341 20287013 + promoter-TSS (AT3G54790.1) 93 AT3G54800 AT3G54800 - Pleckstrin homology (PH) and lipid-binding START domains-containing protein protein-coding common peak11258 3 20289366 20290676 + TTS (AT3G54800.2) 3937 AT3G54800 AT3G54800 - Pleckstrin homology (PH) and lipid-binding START domains-containing protein protein-coding VNsp peak11265 3 20329690 20331067 + promoter-TSS (AT3G54870.1) -302 AT3G54870 MRH2 ARK1|ARMADILLO REPEAT-CONTAINING KINESIN 1|Arabidopsis thaliana KINESIN Ungrouped clade|AtKINUc|CA-ROP2 ENHANCER 1|CAE1|MORPHOGENESIS OF ROOT HAIR 2|gene A Armadillo/beta-catenin repeat family protein / kinesin motor family protein protein-coding common peak11266 3 20335863 20336124 + TTS (AT3G54880.1) 2605 AT3G54880 AT3G54880 - zinc finger protein protein-coding common peak11277 3 20371836 20372225 + exon (AT3G54980.2, exon 1 of 2) 1811 AT3G54980 AT3G54980 T15C9.5 Pentatricopeptide repeat (PPR) superfamily protein protein-coding common peak11281 3 20400799 20402759 + exon (AT3G55050.1, exon 3 of 4) 806 AT3G55050 AT3G55050 - Protein phosphatase 2C family protein protein-coding common peak11290 3 20457285 20458532 + promoter-TSS (AT3G55190.1) -11 AT3G55190 AT3G55190 - alpha/beta-Hydrolases superfamily protein protein-coding VNsp peak11306 3 20549881 20551081 + exon (AT3G55430.1, exon 2 of 2) 1734 AT3G55430 AT3G55430 - O-Glycosyl hydrolases family 17 protein protein-coding common peak11329 3 20669190 20669596 + TTS (AT3G55690.1) -1722 AT3G55700 AT3G55700 - UDP-Glycosyltransferase superfamily protein protein-coding common peak11332 3 20681159 20682023 + TTS (AT3G55730.1) 1927 AT3G55720 AT3G55720 - replication factor C subunit, putative (DUF620) protein-coding common peak11338 3 20702999 20703415 + promoter-TSS (AT3G55770.5) -15 AT3G55770 WLIM2b - GATA type zinc finger transcription factor family protein protein-coding VNsp peak11348 3 20746424 20748027 + promoter-TSS (AT3G55935.1) -250 AT3G55935 AT3G55935 - pre-mRNA-splicing factor protein-coding common peak11349 3 20752329 20753721 + TTS (AT3G55950.1) 3665 AT3G55950 CCR3 ATCRR3|CRINKLY4 related 3 CRINKLY4 related 3 protein-coding common peak11351 3 20763121 20763474 + promoter-TSS (AT3G55960.1) -241 AT3G55960 AT3G55960 - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein protein-coding common peak11352 3 20764466 20765755 + Intergenic -2054 AT3G55960 AT3G55960 - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein protein-coding common peak11355 3 20788425 20788770 + promoter-TSS (AT3G56010.1) -13 AT3G56010 AT3G56010 - transmembrane protein protein-coding common peak11358 3 20807787 20808310 + promoter-TSS (AT3G56070.2) 3 AT3G56070 ROC2 ROTAMASE CYCLOPHILIN 2|ROTAMASE CYP 2|rotamase cyclophilin 2 rotamase cyclophilin 2 protein-coding common peak11360 3 20812824 20813698 + promoter-TSS (AT3G56080.2) -151 AT3G56080 AT3G56080 - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein protein-coding common peak11372 3 20872335 20873061 + TTS (AT3G56270.1) 2698 AT3G56270 AT3G56270 - WEB family protein (DUF827) protein-coding common peak11395 3 20991093 20991704 + exon (AT3G56680.1, exon 1 of 4) 118 AT3G56680 AT3G56680 - Single-stranded nucleic acid binding R3H protein protein-coding common peak11455 3 21293959 21296035 + Intergenic -1826 AT3G57520 SIP2 AtSIP2|RS2|raffinose synthase 2|seed imbibition 2 seed imbibition 2 protein-coding common peak11478 3 21413143 21413612 + Intergenic -1473 AT3G57800 AT3G57800 AT3G57795 basic helix-loop-helix (bHLH) DNA-binding superfamily protein protein-coding VNsp peak11484 3 21437701 21438615 + promoter-TSS (AT3G57890.2) 74 AT3G57890 AT3G57890 - Tubulin binding cofactor C domain-containing protein protein-coding common peak11486 3 21446025 21446252 + promoter-TSS (AT3G57920.1) -103 AT3G57920 SPL15 squamosa promoter binding protein-like 15 squamosa promoter binding protein-like 15 protein-coding VNsp peak11518 3 21592510 21594222 + promoter-TSS (AT3G58350.1) -404 AT3G58350 RTM3 RESTRICTED TEV MOVEMENT 3 RESTRICTED TEV MOVEMENT 3 protein-coding common peak11525 3 21643292 21643607 + TTS (AT3G58520.2) 2037 AT3G58520 AT3G58520 - Ubiquitin carboxyl-terminal hydrolase family protein protein-coding VNsp peak11527 3 21653733 21654406 + exon (AT3G58560.1, exon 1 of 11) 131 AT3G58560 AT3G58560 - DNAse I-like superfamily protein protein-coding common peak11528 3 21656251 21657388 + intron (AT3G58570.1, intron 1 of 6) 335 AT3G58570 AT3G58570 - P-loop containing nucleoside triphosphate hydrolases superfamily protein protein-coding common peak11529 3 21660142 21660882 + TTS (AT3G58580.1) 3583 AT3G58580 AT3G58580 - DNAse I-like superfamily protein protein-coding VNsp peak11530 3 21663712 21663999 + exon (AT3G58580.1, exon 1 of 11) 240 AT3G58580 AT3G58580 - DNAse I-like superfamily protein protein-coding common peak11551 3 21779785 21781007 + promoter-TSS (AT3G58930.2) 37 AT3G58930 AT3G58930 - F-box/RNI-like superfamily protein protein-coding common peak11553 3 21786042 21786879 + promoter-TSS (AT3G58950.1) -620 AT3G58950 AT3G58950 - F-box/RNI-like superfamily protein protein-coding VNsp peak11570 3 21875016 21875600 + TTS (AT3G59150.1) 285 AT3G59160 AT3G59160 - F-box/RNI-like superfamily protein protein-coding common peak11578 3 21910452 21911607 + promoter-TSS (AT3G59290.1) -291 AT3G59280 TXR1 AtPAM16|MUSE5|PAM16|THAXTOMIN A RESISTANT 1|mutant|snc1-enhancing 5 Protein Transporter, Pam16 protein-coding common peak11581 3 21932454 21933900 + exon (AT3G59350.6, exon 1 of 5) 206 AT3G59350 AT3G59350 - Protein kinase superfamily protein protein-coding VNsp peak11597 3 22015258 22016458 + promoter-TSS (AT3G59600.1) -518 AT3G59600 NRPB8B NRPD8B|NRPE8B RNA polymerase Rpb8 protein-coding common peak11601 3 22044457 22046455 + exon (AT3G59680.1, exon 2 of 2) 1537 AT3G59680 AT3G59680 - Serine/Threonine-kinase protein-coding common peak11604 3 22055854 22056753 + intron (AT3G59710.1, intron 2 of 3) 606 AT3G59710 AT3G59710 - NAD(P)-binding Rossmann-fold superfamily protein protein-coding common peak11606 3 22066071 22068538 + exon (AT3G59740.1, exon 1 of 1) -1347 AT3G59730 AT3G59730 L-type lectin receptor kinase V.6|LecRK-V.6 Concanavalin A-like lectin protein kinase family protein protein-coding common peak11616 3 22112563 22113061 + Intergenic -1080 AT3G59850 AT3G59850 - Pectin lyase-like superfamily protein protein-coding VNsp peak11635 3 22186655 22187806 + promoter-TSS (AT3G60070.2) -45 AT3G60080 AT3G60080 - RING/U-box superfamily protein protein-coding common peak11646 3 22247867 22250743 + exon (AT3G60200.1, exon 1 of 1) 413 AT3G60200 AT3G60200 F27H5.7 hypothetical protein protein-coding common peak11648 3 22259326 22260101 + exon (AT3G60238.1, exon 1 of 2) 131 AT3G60238 AT3G60238 - ncRNA ncRNA common peak11649 3 22261477 22262332 + exon (AT3G60240.3, exon 1 of 9) 180 AT3G60240 EIF4G CUCUMOVIRUS MULTIPLICATION 2|CUM2|EUKARYOTIC TRANSLATION INITIATION FACTOR 4G|eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G protein-coding common peak11655 3 22287192 22288422 + TTS (AT3G60300.1) 125 AT3G60310 AT3G60310 - acyl-CoA synthetase family protein protein-coding common peak11658 3 22310707 22311623 + promoter-TSS (AT3G60350.2) 21 AT3G60350 ARABIDILLO-2 ARABIDILLO2|F-box Armadillo protein 2 ARABIDILLO-2 protein-coding common peak11675 3 22381116 22382746 + promoter-TSS (AT3G60560.1) -527 AT3G60560 AT3G60560 - hypothetical protein protein-coding common peak11694 3 22480994 22482466 + promoter-TSS (AT3G60850.1) -149 AT3G60850 AT3G60850 - hypothetical protein protein-coding common peak11708 3 22546952 22547484 + intron (AT3G60961.1, intron 1 of 5) -5342 AT3G60966 AT3G60966 - RING/U-box superfamily protein protein-coding common peak11709 3 22547625 22548516 + intron (AT3G60961.1, intron 1 of 5) -4490 AT3G60966 AT3G60966 - RING/U-box superfamily protein protein-coding common peak11711 3 22562655 22563134 + promoter-TSS (AT3G60972.1) -318 AT3G60972 AT3G60972 - ncRNA ncRNA common peak11715 3 22570643 22571471 + TTS (AT3G61010.2) -1082 AT3G60990 AT3G60990 - glycosyltransferase family protein (DUF23) protein-coding VNsp peak11717 3 22580636 22583242 + TTS (AT3G61028.3) 2942 AT3G61028 AT3G61028 - Putative endonuclease or glycosyl hydrolase protein-coding common peak11733 3 22665329 22666261 + promoter-TSS (AT3G61230.1) -105 AT3G61230 PLIM2c AtPLIM2c|pollen-specific LIM protein 2c GATA type zinc finger transcription factor family protein protein-coding common peak11753 3 22793267 22794056 + exon (AT3G61590.1, exon 2 of 2) 1549 AT3G61590 HWS F15G16.3|HAWAIIAN SKIRT|HS Galactose oxidase/kelch repeat superfamily protein protein-coding common peak11765 3 22856217 22857493 + TTS (AT3G61750.2) 117 AT3G61740 SDG14 ATX3|F21F14.13|SET domain protein 14 SET domain protein 14 protein-coding common peak11766 3 22863788 22864932 + promoter-TSS (AT3G61770.1) -131 AT3G61760 DL1B ADL1B|DYNAMIN-like 1B|F21F14.15 DYNAMIN-like 1B protein-coding common peak11787 3 22999609 23000989 + promoter-TSS (AT3G62110.1) -78 AT3G62110 AT3G62110 - Pectin lyase-like superfamily protein protein-coding common peak11827 3 23200384 23203132 + exon (AT3G62720.2, exon 2 of 2) 725 AT3G62720 XT1 ATXT1|AtXXT1|XXT1|XYG XYLOSYLTRANSFERASE 1|xylosyltransferase 1 xylosyltransferase 1 protein-coding common peak11842 3 23287400 23288025 + Intergenic -1531 AT3G63010 GID1B ATGID1B|GA INSENSITIVE DWARF1B alpha/beta-Hydrolases superfamily protein protein-coding common peak11859 3 23372731 23373200 + promoter-TSS (AT3G63250.1) 95 AT3G63255 AT3G63255 - hypothetical protein protein-coding VNsp peak11866 3 23403070 23403322 + exon (AT3G63370.2, exon 1 of 4) 1120 AT3G63370 OTP86 MAA21.7|ORGANELLE TRANSCRIPT PROCESSING 86 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding VNsp peak11868 3 23411435 23412059 + promoter-TSS (AT3G63400.1) 241 AT3G63390 AT3G63390 - hypothetical protein protein-coding common peak8513 3 2086594 2087255 + promoter-TSS (AT3G66654.3) -992 AT3G66654 AT3G66654 T8E24.14|T8E24_14 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein protein-coding VNsp peak11879 4 10311 11478 + promoter-TSS (AT4G00020.4) -390 AT4G00020 BRCA2(IV) BRCA2A|BREAST CANCER 2 like 2A|EDA20|EMBRYO SAC DEVELOPMENT ARREST 20|F6N15.14|F6N15_14|MATERNAL EFFECT EMBRYO ARREST 43|MEE43 BREAST CANCER 2 like 2A protein-coding common peak11887 4 45721 46369 + Intergenic -2069 AT4G00130 AT4G00130 F6N15.6|F6N15_6 DNA-binding storekeeper protein-related transcriptional regulator protein-coding common peak11889 4 53331 53889 + promoter-TSS (AT4G00140.1) -161 AT4G00140 EDA34 F6N15.19|F6N15_19|embryo sac development arrest 34 Calcium-binding EF-hand family protein protein-coding common peak11899 4 100048 100736 + promoter-TSS (AT4G00234.1) 452 AT4G00232 AT4G00232 - DNA-binding storekeeper protein-related transcriptional regulator protein-coding common peak11916 4 200340 201516 + promoter-TSS (AT4G00450.2) 54 AT4G00450 CCT A_IG005I10.24|A_IG005I10_24|CENTER CITY|CRP|CRYPTIC PRECOCIOUS|F5I10.24|F5I10_24|GCT|GRAND CENTRAL|MED12|mediator 12 RNA polymerase II transcription mediator protein-coding common peak11926 4 252057 253423 + promoter-TSS (AT4G00585.1) -26 AT4G00590 AT4G00590 F6N23.5|F6N23_5 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein protein-coding common peak11935 4 296978 297913 + promoter-TSS (AT4G00720.1) 34 AT4G00720 SK32 ASKTHETA|ATSK32|F6N23.11|F6N23_11|SHAGGY-LIKE PROTEIN KINASE THETA|shaggy-like protein kinase 32 shaggy-like protein kinase 32 protein-coding VNsp peak11937 4 310150 310986 + promoter-TSS (AT4G00740.1) -51 AT4G00740 QUA3 F15P23.2|F15P23_2|QUASIMODO 3 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein protein-coding common peak11947 4 374561 375689 + TTS (AT4G00889.1) 225 AT4G00890 AT4G00890 ATXYN5|A_TM018A10.5|A_TM018A10_5|T18A10.19|T18A10_19 proline-rich family protein protein-coding common peak11954 4 433487 434828 + promoter-TSS (AT4G01000.2) -128 AT4G01000 AT4G01000 F3I3.20|F3I3_20 Ubiquitin-like superfamily protein protein-coding common peak11970 4 524566 525451 + promoter-TSS (AT4G01250.1) -759 AT4G01250 WRKY22 AtWRKY22|F2N1.6|F2N1_6 WRKY family transcription factor protein-coding common peak11974 4 537171 537917 + TTS (AT4G01290.2) 2303 AT4G01280 AT4G01280 F2N1.20|F2N1_20 Homeodomain-like superfamily protein protein-coding common peak11977 4 549861 550389 + promoter-TSS (AT4G01330.3) -50 AT4G01330 AT4G01330 F2N1.22|F2N1_22 Protein kinase superfamily protein protein-coding common peak11980 4 575481 576419 + promoter-TSS (AT4G01395.1) -177 AT4G01395 AT4G01395 - conserved oligomeric Golgi complex subunit 4 protein-coding common peak11986 4 591717 593517 + promoter-TSS (AT4G01435.1) -25 AT4G01435 AT4G01435 - hypothetical protein protein-coding common peak11992 4 624699 626335 + promoter-TSS (AT4G01480.2) 368 AT4G01470 TIP1;3 ATTIP1.3|F11O4.1|F11O4_1|GAMMA-TIP3|tonoplast intrinsic protein 1;3 tonoplast intrinsic protein 1;3 protein-coding common peak12002 4 676432 676894 + promoter-TSS (AT4G01550.1) -218 AT4G01550 NAC069 ANAC069|F11O4.5|F11O4_5|NAC domain containing protein 69|NAC with Transmembrane Motif 2|NTM2|anac069 NAC domain containing protein 69 protein-coding common peak12008 4 692519 693208 + promoter-TSS (AT4G01600.1) 10 AT4G01600 AT4G01600 T15B16.24|T15B16_24 GRAM domain family protein protein-coding common peak12023 4 785556 786415 + promoter-TSS (AT4G01820.2) -645 AT4G01820 ABCB3 ATP-binding cassette B3|MDR3|P-glycoprotein 3|PGP3|T7B11.8|T7B11_8 P-glycoprotein 3 protein-coding common peak12025 4 797954 798563 + promoter-TSS (AT4G01850.2) 22 AT4G01850 SAM-2 AtSAM2|MAT2|S-ADENOSYLMETHIONINE SYNTHETASE 2|S-adenosylmethionine synthetase 2|SAM2|T7B11.11|T7B11_11 S-adenosylmethionine synthetase 2 protein-coding common peak12038 4 852067 852708 + exon (AT4G01960.1, exon 2 of 4) 851 AT4G01960 AT4G01960 T7B11.22|T7B11_22 transmembrane protein protein-coding common peak12051 4 919906 920137 + Intergenic -1426 AT4G02080 SAR2 ASAR1|ATSAR2|ATSARA1C|T10M13.9|T10M13_9|secretion-associated RAS super family 2 secretion-associated RAS super family 2 protein-coding VNsp peak12057 4 944485 944778 + TTS (AT4G02130.2) 2444 AT4G02130 GATL6 LGT10|T10M13.14|T10M13_14|galacturonosyltransferase 6|galacturonosyltransferase-like 6 galacturonosyltransferase 6 protein-coding common peak12060 4 953401 954151 + promoter-TSS (AT4G02150.2) -86 AT4G02150 MOS6 6|ATIMPALPHA3|IMPA-3|IMPORTIN ALPHA 3|IMPORTIN ALPHA ISOFORM 3|MODIFIER OF SNC1|T10M13.16|T10M13_16 ARM repeat superfamily protein protein-coding common peak12075 4 1041591 1042526 + promoter-TSS (AT4G02370.1) -177 AT4G02370 AT4G02370 T14P8.18|T14P8_18 pectinesterase (Protein of unknown function, DUF538) protein-coding common peak12086 4 1088204 1089035 + exon (AT4G02480.1, exon 1 of 27) 227 AT4G02480 AT4G02480 AT4G02470|T14P8.8|T14P8_8 AAA-type ATPase family protein protein-coding common peak12098 4 1158283 1159473 + promoter-TSS (AT4G02655.1) 30 AT4G02655 AT4G02655 - transmembrane protein protein-coding VNsp peak12111 4 1219831 1221341 + TTS (AT4G02750.1) 348 AT4G02740 AT4G02740 T5J8.4|T5J8_4 F-box/RNI-like superfamily protein protein-coding common peak12126 4 1297990 1299066 + promoter-TSS (AT4G02930.1) -28 AT4G02930 AT4G02930 T4I9.19 GTP binding Elongation factor Tu family protein protein-coding common peak12129 4 1313791 1314069 + Intergenic 2732 AT4G02950 AT4G02950 T4I9.17|T4I9_17 Ubiquitin family protein protein-coding common peak12130 4 1314279 1314545 + Intergenic -3087 AT4G02970 AT7SL-1 7SL RNA1|T4I9.15|T4I9_15 7SL RNA1 protein-coding VNsp peak12133 4 1323198 1324300 + promoter-TSS (AT4G03000.4) -314 AT4G03000 AT4G03000 T4I9.12|T4I9_12 RING/U-box superfamily protein protein-coding common peak12135 4 1336836 1337862 + exon (AT4G03030.1, exon 1 of 1) 216 AT4G03030 AT4G03030 T4I9.9|T4I9_9 Galactose oxidase/kelch repeat superfamily protein protein-coding common peak12137 4 1357481 1357830 + promoter-TSS (AT4G03070.1) -612 AT4G03070 AOP1 AOP|AOP1.1|T4I9.5|T4I9_5 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein protein-coding VNsp peak12138 4 1365479 1366709 + promoter-TSS (AT4G03080.1) -596 AT4G03080 BSL1 BRI1 suppressor 1 (BSU1)-like 1|T4I9.4|T4I9_4 BRI1 suppressor 1 (BSU1)-like 1 protein-coding common peak12140 4 1373823 1374469 + promoter-TSS (AT4G03100.1) -14 AT4G03100 AT4G03100 F4C21.2 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein protein-coding common peak12156 4 1463746 1466631 + exon (AT4G03320.1, exon 3 of 3) 721 AT4G03320 Tic20-IV AtTic20-IV|F4C21.25|F4C21_25|translocon at the inner envelope membrane of chloroplasts 20-IV translocon at the inner envelope membrane of chloroplasts 20-IV protein-coding common peak12160 4 1487550 1488631 + intron (AT4G03380.1, intron 3 of 6) 2138 AT4G03380 AT4G03380 F4C21.34|F4C21_34 hypothetical protein protein-coding common peak12166 4 1520013 1521114 + promoter-TSS (AT4G03430.1) 0 AT4G03430 EMB2770 EMBRYO DEFECTIVE 2770|F9H3.5|F9H3_5|STA1|STABILIZED 1 pre-mRNA splicing factor-like protein protein-coding common peak12170 4 1559113 1560199 + promoter-TSS (AT4G03510.4) -219 AT4G03510 RMA1 ATRMA1|F9H3.14|F9H3_14|RING membrane-anchor 1 RING membrane-anchor 1 protein-coding common peak11905 4 132455 133344 + promoter-TSS (AT4G00310.1) 187 AT4G03555 AT4G03555 - ncRNA ncRNA common peak12175 4 1585865 1586602 + promoter-TSS (AT4G03565.1) -514 AT4G03565 AT4G03565 - Cystatin/monellin superfamily protein protein-coding common peak12176 4 1586675 1587717 + intron (AT4G03565.1, intron 1 of 2) 449 AT4G03565 AT4G03565 - Cystatin/monellin superfamily protein protein-coding common peak12178 4 1596022 1596359 + promoter-TSS (AT4G03580.1) -795 AT4G03580 AT4G03580 T5L23.7|T5L23_7 hypothetical protein protein-coding VNsp peak12179 4 1596820 1597042 + promoter-TSS (AT4G03580.1) -54 AT4G03580 AT4G03580 T5L23.7|T5L23_7 hypothetical protein protein-coding VNsp peak12181 4 1606449 1606879 + TTS (AT4G03620.2) 1565 AT4G03620 AT4G03620 T5L23.11|T5L23_11 myosin heavy chain-like protein protein-coding common peak12184 4 1647076 1647610 + Intergenic -1073 AT4G03645 AT4G03645 - hypothetical protein protein-coding VNsp peak12186 4 1742333 1743567 + Intergenic -13634 AT4G03811 AT4G03811 - ncRNA ncRNA VNsp peak12187 4 1756649 1757601 + TTS (AT4G03811.1) 541 AT4G03811 AT4G03811 - ncRNA ncRNA VNsp peak12188 4 1766836 1767534 + Intergenic 7297 AT4G03820 AT4G03820 T7M24.8|T7M24_8 transmembrane protein, putative (DUF3537) protein-coding VNsp peak12192 4 1813679 1815669 + Intergenic 24234 AT4G03830 AT4G03830 T7M24.5|T7M24_5 hypothetical protein (Protein of unknown function, DUF601) protein-coding VNsp peak12004 4 681000 681271 + promoter-TSS (AT4G03895.1) -727 AT4G03895 AT4G03895 - ncRNA ncRNA common peak12193 4 1847692 1847921 + Intergenic 21395 AT4G03935 AT4G03935 - ncRNA ncRNA VNsp peak12195 4 1882742 1883238 + Intergenic 3472 AT4G03950 AT4G03950 T24M8.5|T24M8_5 Nucleotide/sugar transporter family protein protein-coding VNsp peak12198 4 1898841 1899412 + Intergenic 9766 AT4G03965 AT4G03965 - RING/U-box superfamily protein protein-coding VNsp peak12199 4 1931228 1932471 + promoter-TSS (AT4G04020.1) -34 AT4G04020 FIB FIB1a|PGL35|T24H24.16|T24H24_16|fibrillin|fibrillin 1a|plastoglobulin 35 fibrillin protein-coding common peak12200 4 1933704 1933933 + TTS (AT4G04025.1) 817 AT4G04025 AT4G04025 - transcription repressor protein-coding common peak12202 4 1943616 1943835 + TTS (AT4G04040.1) 4612 AT4G04040 MEE51 T24H24.15|T24H24_15|maternal effect embryo arrest 51 Phosphofructokinase family protein protein-coding VNsp peak12203 4 1959416 1960357 + Intergenic -1240 AT4G04077 AT4G04077 - ncRNA ncRNA common peak12204 4 1963196 1963663 + exon (AT4G04080.1, exon 1 of 3) 138 AT4G04080 ISU3 ATISU3|ISCU-LIKE 3|ISCU-like 3|T24H24.11|T24H24_11 ISCU-like 3 protein-coding common peak12205 4 1968267 1968752 + Intergenic 3529 AT4G04090 AT4G04090 T24H24.21|T24H24_21 BTB/POZ domain-containing protein protein-coding VNsp peak12206 4 1975592 1976221 + Intergenic 3315 AT4G04110 AT4G04110 T24H24.18|T24H24_18 Toll-Interleukin-Resistance (TIR) domain family protein protein-coding common peak12101 4 1181274 1181837 + exon (AT4G02680.1, exon 4 of 5) -2787 AT4G04235 AT4G04235 - ncRNA ncRNA common peak12211 4 2095007 2095522 + promoter-TSS (AT4G04315.1) 5 AT4G04315 AT4G04315 - ncRNA ncRNA VNsp peak12215 4 2121467 2121799 + promoter-TSS (AT4G04340.1) -874 AT4G04340 AT4G04340 T19B17.6|T19B17_6|induced Ca2+ increase 1 (osca1)|osca1|reduced hyperosmolality ERD (early-responsive to dehydration stress) family protein protein-coding VNsp peak12217 4 2126555 2127389 + TTS (AT4G04340.1) -1118 AT4G04350 EMB2369 EMBRYO DEFECTIVE 2369|T19B17.7|T19B17_7 tRNA synthetase class I (I, L, M and V) family protein protein-coding common peak12219 4 2133639 2134191 + promoter-TSS (AT4G04360.1) 20 AT4G04360 AT4G04360 T19B17.8|T19B17_8 transmembrane protein, putative (DUF1068) protein-coding VNsp peak12221 4 2150842 2151258 + Intergenic -12957 AT4G04402 AT4G04402 - two-component phosphorelay mediator protein-coding VNsp peak12222 4 2205634 2206059 + Intergenic 2422 AT4G04423 AT4G04423 - hypothetical protein protein-coding VNsp peak12224 4 2219527 2220648 + exon (AT4G04450.1, exon 4 of 6) 2006 AT4G04450 WRKY42 AtWRKY42|T26N6.6|T26N6_6 WRKY family transcription factor protein-coding common peak12225 4 2228774 2230119 + promoter-TSS (AT4G04470.2) -166 AT4G04470 PMP22 22-KD PEROXISOMAL MEMBRANE PROTEIN|T26N6.9|T26N6_9 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein protein-coding common peak12226 4 2237546 2238017 + promoter-TSS (AT4G04500.1) -589 AT4G04500 CRK37 T26N6.11|T26N6_11|cysteine-rich RLK (RECEPTOR-like protein kinase) 37 cysteine-rich RLK (RECEPTOR-like protein kinase) 37 protein-coding VNsp peak12228 4 2240849 2241320 + promoter-TSS (AT4G04510.2) -988 AT4G04510 CRK38 F4H6.1|cysteine-rich RLK (RECEPTOR-like protein kinase) 38 cysteine-rich RLK (RECEPTOR-like protein kinase) 38 protein-coding common peak12229 4 2244896 2245163 + TTS (AT4G04510.2) 2907 AT4G04510 CRK38 F4H6.1|cysteine-rich RLK (RECEPTOR-like protein kinase) 38 cysteine-rich RLK (RECEPTOR-like protein kinase) 38 protein-coding VNsp peak12230 4 2269307 2270438 + Intergenic -3073 AT4G04555 AT4G04555 - Myb family transcription factor protein-coding VNsp peak12232 4 2292802 2293413 + TTS (AT4G04580.1) 1799 AT4G04580 AT4G04580 F4H6.10|F4H6_10 Homeodomain-like superfamily protein protein-coding VNsp peak12233 4 2301407 2302479 + Intergenic -7037 AT4G04580 AT4G04580 F4H6.10|F4H6_10 Homeodomain-like superfamily protein protein-coding VNsp peak12234 4 2311269 2311865 + Intergenic -1996 AT4G04601 AT4G04601 - hypothetical protein protein-coding VNsp peak12239 4 2329663 2330495 + exon (AT4G04620.1, exon 1 of 6) 410 AT4G04620 ATG8B F4H6.14|F4H6_14|autophagy 8b Ubiquitin-like superfamily protein protein-coding common peak12241 4 2336158 2336529 + Intergenic -3529 AT4G04630 AT4G04630 F4H6.15|F4H6_15 senescence regulator (Protein of unknown function, DUF584) protein-coding common peak12243 4 2374613 2376300 + promoter-TSS (AT4G04690.1) -321 AT4G04690 AT4G04690 T19J18.6|T19J18_6 F-box and associated interaction domains-containing protein protein-coding common peak12244 4 2383981 2385309 + promoter-TSS (AT4G04695.1) -524 AT4G04695 CPK31 calcium-dependent protein kinase 31 calcium-dependent protein kinase 31 protein-coding common peak12250 4 2432012 2432476 + promoter-TSS (AT4G04780.1) -8 AT4G04780 MED21 T4B21.8|T4B21_8|mediator 21 mediator 21 protein-coding common peak12207 4 1995264 1995562 + Intergenic 1880 AT4G04785 AT4G04785 - ncRNA ncRNA common peak12251 4 2438508 2440623 + promoter-TSS (AT4G04790.1) 45 AT4G04800 MSRB3 ATMSRB3|T4B21.6|T4B21_6|methionine sulfoxide reductase B3 methionine sulfoxide reductase B3 protein-coding common peak12258 4 2477790 2478330 + intron (AT4G04890.2, intron 8 of 11) 3530 AT4G04890 PDF2 T1J1.3|T1J1_3|protodermal factor 2 protodermal factor 2 protein-coding common peak12264 4 2511231 2511817 + TTS (AT4G04930.1) 2471 AT4G04930 DES-1-LIKE DES-1-LIKE TRANSMEMBRANE PROTEIN|T1J1.1|T1J1_1 fatty acid desaturase family protein protein-coding common peak12269 4 2542904 2544446 + TTS (AT4G04980.2) 253 AT4G04972 AT4G04972 - hypothetical protein protein-coding VNsp peak12270 4 2547624 2548554 + promoter-TSS (AT4G04980.2) 41 AT4G04980 AT4G04980 C17L7.1 hypothetical protein protein-coding VNsp peak12253 4 2447368 2447729 + TTS (AT4G04830.2) 682 AT4G04995 AT4G04995 - ncRNA ncRNA common peak12277 4 2577788 2579339 + promoter-TSS (AT4G05040.3) -31 AT4G05040 AT4G05040 C17L7.12 ankyrin repeat family protein protein-coding common peak12278 4 2585802 2586276 + TTS (AT4G05048.1) 706 AT4G05045 AT4G05045 - ncRNA ncRNA VNsp peak12283 4 2605884 2606383 + Intergenic -2933 AT4G05090 AT4G05090 C17L7.10|C17L7_10 Inositol monophosphatase family protein protein-coding VNsp peak12286 4 2650649 2650990 + TTS (AT4G05140.1) 2389 AT4G05140 AT4G05140 C17L7.60|C17L7_60 Nucleoside transporter family protein protein-coding VNsp peak12384 4 4628093 4629117 + Intergenic -7515 AT4G05215 AT4G05215 - ncRNA ncRNA VNsp peak12390 4 4678593 4678926 + Intergenic -10397 AT4G05245 AT4G05245 - ncRNA ncRNA common peak12392 4 4784295 4784855 + Intergenic -6328 AT4G05255 AT4G05255 - ncRNA ncRNA VNsp peak12393 4 4790810 4791316 + exon (AT4G05255.1, exon 1 of 1) 160 AT4G05255 AT4G05255 - ncRNA ncRNA common peak12405 4 4940760 4941603 + Intergenic -30119 AT4G05315 AT4G05315 - ncRNA ncRNA VNsp peak12406 4 4950929 4951368 + Intergenic -20152 AT4G05315 AT4G05315 - ncRNA ncRNA VNsp peak12407 4 4970378 4970785 + promoter-TSS (AT4G05315.1) -719 AT4G05315 AT4G05315 - ncRNA ncRNA VNsp peak12417 4 5120266 5121352 + Intergenic 2032 AT4G05355 AT4G05355 - ncRNA ncRNA VNsp peak12298 4 2735709 2736558 + promoter-TSS (AT4G05380.1) 24 AT4G05380 AT4G05380 C6L9.60|C6L9_60 P-loop nucleoside triphosphate hydrolase superfamily protein protein-coding common peak12432 4 5292601 5292980 + promoter-TSS (at4g05415) 30 at4g05415 common peak12302 4 2756928 2757452 + promoter-TSS (AT4G05440.1) -7 AT4G05440 EDA35 C6L9.120|C6L9_120|embryo sac development arrest 35 temperature sensing protein-like protein protein-coding common peak12436 4 5317281 5318487 + TTS (AT4G08390.5) 557 AT4G05445 AT4G05445 - ncRNA ncRNA common peak12304 4 2761943 2762676 + TTS (AT4G05470.1) 136 AT4G05460 AT4G05460 C6L9.140|C6L9_140 RNI-like superfamily protein protein-coding common peak12440 4 5352724 5353441 + TTS (AT4G05465.1) 283 AT4G05465 AT4G05465 - ncRNA ncRNA common peak12442 4 5363524 5364140 + promoter-TSS (AT4G05485.1) -827 AT4G05485 AT4G05485 - ncRNA ncRNA VNsp peak12305 4 2772364 2773014 + promoter-TSS (AT4G05490.1) -437 AT4G05490 AT4G05490 C6L9.170|C6L9_170 RNI-like superfamily protein protein-coding common peak12309 4 2802691 2803410 + Intergenic -1353 AT4G05520 EHD2 ATEHD2|EPS15 homology domain 2|T1J24.10|T1J24_10 EPS15 homology domain 2 protein-coding common peak12310 4 2803868 2804889 + promoter-TSS (AT4G05520.2) -25 AT4G05520 EHD2 ATEHD2|EPS15 homology domain 2|T1J24.10|T1J24_10 EPS15 homology domain 2 protein-coding common peak12311 4 2816227 2816980 + intron (AT4G05530.1, intron 1 of 5) 286 AT4G05530 IBR1 INCREASED BOTRYTIS RESISTANCE 1|SDRA|SHORT-CHAIN DEHYDROGENASE/REDUCTASE A|T1J24.9|T1J24_9|indole-3-butyric acid response 1 indole-3-butyric acid response 1 protein-coding common peak12313 4 2828430 2829381 + Intergenic 2858 AT4G05553 AT4G05553 - zinc knuckle (CCHC-type) family protein protein-coding VNsp peak12314 4 2840594 2841768 + Intergenic 6944 AT4G05555 AT4G05555 - hypothetical protein protein-coding VNsp peak12315 4 2875985 2876448 + Intergenic -28091 AT4G05555 AT4G05555 - hypothetical protein protein-coding VNsp peak12316 4 2877978 2878476 + Intergenic -28785 AT4G05590 AT4G05590 F6H8.10|F6H8_10|NRGA1|Negative Regulator of Guard Cell ABA Signaling 1 pyruvate carrier-like protein protein-coding VNsp peak12317 4 2904398 2904769 + Intergenic -2429 AT4G05590 AT4G05590 F6H8.10|F6H8_10|NRGA1|Negative Regulator of Guard Cell ABA Signaling 1 pyruvate carrier-like protein protein-coding VNsp peak12319 4 2994744 2995641 + Intergenic -2574 AT4G05631 AT4G05631 - hypothetical protein protein-coding VNsp peak12475 4 5700880 5701744 + promoter-TSS (AT4G05660.1) -34 AT4G05660 AT4G05660 - ncRNA ncRNA common peak12498 4 5916993 5917229 + promoter-TSS (AT4G05705.1) -375 AT4G05705 AT4G05705 - ncRNA ncRNA VNsp peak12531 4 6203747 6203971 + TTS (AT4G05740.1) 238 AT4G05740 AT4G05740 - ncRNA ncRNA VNsp peak12550 4 6331757 6332693 + Intergenic -1715 AT4G05770 AT4G05770 - ncRNA ncRNA VNsp peak12607 4 6672632 6674045 + Intergenic -1464 AT4G05840 AT4G05840 - ncRNA ncRNA VNsp peak12665 4 6954200 6954580 + promoter-TSS (AT4G05885.1) -703 AT4G05885 AT4G05885 - ncRNA ncRNA VNsp peak12707 4 7215279 7217035 + TTS (AT4G12040.2) 441 AT4G05940 AT4G05940 - ncRNA ncRNA common peak12793 4 7681499 7682714 + exon (AT4G13240.1, exon 7 of 7) -1681 AT4G06010 AT4G06010 - ncRNA ncRNA VNsp peak12950 4 8535668 8536479 + promoter-TSS (AT4G14920.1) -15 AT4G06285 AT4G06285 - ncRNA ncRNA common peak12320 4 3132427 3133088 + Intergenic 15863 AT4G06490 AT4G06490 - hypothetical protein (DUF3287) protein-coding VNsp peak12321 4 3133901 3134205 + Intergenic 17159 AT4G06490 AT4G06490 - hypothetical protein (DUF3287) protein-coding common peak12323 4 3150685 3151767 + Intergenic 34332 AT4G06490 AT4G06490 - hypothetical protein (DUF3287) protein-coding VNsp peak12324 4 3306824 3307017 + Intergenic 14025 AT4G06526 AT4G06526 - nucleic acid binding / zinc ion binding protein protein-coding VNsp peak12325 4 3308894 3309421 + Intergenic 11788 AT4G06526 AT4G06526 - nucleic acid binding / zinc ion binding protein protein-coding VNsp peak12326 4 3326469 3326887 + Intergenic -5733 AT4G06526 AT4G06526 - nucleic acid binding / zinc ion binding protein protein-coding VNsp peak12327 4 3329816 3330284 + Intergenic -9105 AT4G06526 AT4G06526 - nucleic acid binding / zinc ion binding protein protein-coding VNsp peak12328 4 3343673 3344214 + Intergenic -12592 AT4G06534 AT4G06534 - transmembrane protein protein-coding VNsp peak12329 4 3355510 3358113 + exon (AT4G06534.1, exon 1 of 1) 276 AT4G06534 AT4G06534 - transmembrane protein protein-coding common peak12330 4 3362263 3362693 + TTS (AT4G06536.1) 1759 AT4G06536 AT4G06536 - SPla/RYanodine receptor (SPRY) domain-containing protein protein-coding VNsp peak12331 4 3370457 3371288 + Intergenic 10153 AT4G06536 AT4G06536 - SPla/RYanodine receptor (SPRY) domain-containing protein protein-coding VNsp peak12332 4 3407211 3407716 + Intergenic 46744 AT4G06536 AT4G06536 - SPla/RYanodine receptor (SPRY) domain-containing protein protein-coding VNsp peak12333 4 3427321 3427858 + Intergenic 66870 AT4G06536 AT4G06536 - SPla/RYanodine receptor (SPRY) domain-containing protein protein-coding VNsp peak12336 4 3603428 3603842 + Intergenic 27523 AT4G06583 AT4G06583 - hypothetical protein protein-coding VNsp peak12337 4 3658571 3659675 + Intergenic -4205 AT4G06598 AT4G06598 - basic-leucine zipper (bZIP) transcription factor family protein protein-coding VNsp peak12338 4 3666063 3666673 + intron (AT4G06599.1, intron 5 of 5) 1179 AT4G06599 AT4G06599 - ubiquitin family protein protein-coding common peak12340 4 3763135 3763519 + TTS (AT4G06634.1) 3251 AT4G06634 YY1 AtYY1|Yin Yang 1 zinc finger (C2H2 type) family protein protein-coding VNsp peak12342 4 3773511 3774587 + Intergenic -7378 AT4G06634 YY1 AtYY1|Yin Yang 1 zinc finger (C2H2 type) family protein protein-coding VNsp peak12343 4 3794801 3795542 + Intergenic -28500 AT4G06634 YY1 AtYY1|Yin Yang 1 zinc finger (C2H2 type) family protein protein-coding VNsp peak12344 4 3811379 3811893 + Intergenic -44965 AT4G06634 YY1 AtYY1|Yin Yang 1 zinc finger (C2H2 type) family protein protein-coding VNsp peak12345 4 3819479 3820216 + Intergenic -53176 AT4G06634 YY1 AtYY1|Yin Yang 1 zinc finger (C2H2 type) family protein protein-coding VNsp peak12334 4 3474749 3475204 + Intergenic 48961 AT4G06639 AT4G06639 - hypothetical protein protein-coding VNsp peak12335 4 3517819 3518031 + Intergenic 6012 AT4G06639 AT4G06639 - hypothetical protein protein-coding common peak12339 4 3758468 3758828 + promoter-TSS (AT4G06643.1) -309 AT4G06643 AT4G06643 - hypothetical protein protein-coding common peak12346 4 3840796 3841093 + Intergenic 40487 AT4G06655 AT4G06655 - transmembrane protein protein-coding common peak12347 4 3879177 3880006 + Intergenic 1840 AT4G06655 AT4G06655 - transmembrane protein protein-coding VNsp peak13147 4 9644324 9645061 + promoter-TSS (AT4G17160.1) 505 AT4G06675 AT4G06675 - ncRNA ncRNA common peak12350 4 3950688 3955235 + Intergenic -12164 AT4G06701 AT4G06701 - ncRNA ncRNA common peak12351 4 3965676 3966792 + Intergenic -25437 AT4G06701 AT4G06701 - ncRNA ncRNA common peak12352 4 3977693 3980149 + Intergenic -38124 AT4G06701 AT4G06701 - ncRNA ncRNA common peak12353 4 3982444 3983583 + Intergenic -42216 AT4G06701 AT4G06701 - ncRNA ncRNA common peak12354 4 3993950 3995405 + Intergenic -53880 AT4G06701 AT4G06701 - ncRNA ncRNA common peak12355 4 4005591 4006035 + Intergenic -65016 AT4G06701 AT4G06701 - ncRNA ncRNA common peak12356 4 4008850 4011383 + Intergenic 62354 AT4G06744 AT4G06744 - Leucine-rich repeat (LRR) family protein protein-coding common peak12358 4 4080707 4080963 + Intergenic -6100 AT4G06746 RAP2.9 DEAR5|DREB AND EAR MOTIF PROTEIN 5|related to AP2 9 related to AP2 9 protein-coding VNsp peak12359 4 4097282 4097543 + Intergenic -22677 AT4G06746 RAP2.9 DEAR5|DREB AND EAR MOTIF PROTEIN 5|related to AP2 9 related to AP2 9 protein-coding VNsp peak13429 4 11206004 11208370 + promoter-TSS (AT4G06970.1) 90 AT4G06970 AT4G06970 - ncRNA ncRNA common peak13460 4 11363123 11363606 + Intergenic -5388 at4g07000 VNsp peak13653 4 12468594 12469577 + TTS (AT4G24015.1) -1107 AT4G07195 AT4G07195 - ncRNA ncRNA common peak12360 4 4129010 4129286 + Intergenic 36422 AT4G07325 AT4G07325 - replication-like protein protein-coding common peak12361 4 4168791 4169715 + Intergenic -3683 AT4G07325 AT4G07325 - replication-like protein protein-coding VNsp peak12362 4 4195411 4195997 + exon (AT4G07390.2, exon 1 of 9) 140 AT4G07390 AT4G07390 F28D6.6|F28D6_6 Mannose-P-dolichol utilization defect 1 protein protein-coding common peak12365 4 4207428 4207809 + Intergenic -2262 AT4G07410 PCN F28D6.14|F28D6_14|POPCORN Transducin family protein / WD-40 repeat family protein protein-coding VNsp peak12366 4 4208615 4209006 + Intergenic -3454 AT4G07410 PCN F28D6.14|F28D6_14|POPCORN Transducin family protein / WD-40 repeat family protein protein-coding VNsp peak12367 4 4220127 4220568 + Intergenic -14991 AT4G07410 PCN F28D6.14|F28D6_14|POPCORN Transducin family protein / WD-40 repeat family protein protein-coding VNsp peak12368 4 4231958 4232250 + Intergenic -26748 AT4G07410 PCN F28D6.14|F28D6_14|POPCORN Transducin family protein / WD-40 repeat family protein protein-coding VNsp peak12369 4 4264407 4265216 + promoter-TSS (AT4G07445.1) -940 AT4G07445 AT4G07445 - hypothetical protein protein-coding VNsp peak12371 4 4309306 4310957 + Intergenic -1242 AT4G07455 AT4G07455 - hypothetical protein protein-coding VNsp peak12372 4 4332813 4333337 + Intergenic 12900 AT4G07524 AT4G07524 - Ras-related small GTP-binding family protein protein-coding VNsp peak12373 4 4333748 4334591 + Intergenic 11806 AT4G07524 AT4G07524 - Ras-related small GTP-binding family protein protein-coding VNsp peak12374 4 4334994 4336162 + Intergenic 10397 AT4G07524 AT4G07524 - Ras-related small GTP-binding family protein protein-coding VNsp peak12375 4 4339892 4340277 + Intergenic 5891 AT4G07524 AT4G07524 - Ras-related small GTP-binding family protein protein-coding VNsp peak12376 4 4373037 4373550 + Intergenic -13132 AT4G07526 AT4G07526 - hypothetical protein protein-coding VNsp peak12381 4 4547065 4547848 + Intergenic 7818 AT4G07740 AT4G07740 T6L9.5|T6L9_5 hypothetical protein (DUF3287) protein-coding VNsp peak12382 4 4548044 4548819 + Intergenic 8793 AT4G07740 AT4G07740 T6L9.5|T6L9_5 hypothetical protein (DUF3287) protein-coding VNsp peak12385 4 4633566 4633936 + Intergenic 3699 AT4G07820 AT4G07820 F5K24.6|F5K24_6 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein protein-coding VNsp peak12386 4 4637674 4637908 + promoter-TSS (AT4G07820.1) -341 AT4G07820 AT4G07820 F5K24.6|F5K24_6 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein protein-coding VNsp peak12387 4 4642443 4643277 + promoter-TSS (AT4G05225.1) -887 AT4G07825 AT4G07825 - transmembrane protein protein-coding VNsp peak12388 4 4644179 4645158 + exon (AT4G07825.1, exon 1 of 1) 921 AT4G07825 AT4G07825 - transmembrane protein protein-coding common peak12389 4 4657377 4657599 + Intergenic -2226 AT4G07835 AT4G07835 - hypothetical protein protein-coding VNsp peak13887 4 13781435 13783187 + promoter-TSS (AT4G07875.1) 95 AT4G07875 U6.3 - ncRNA ncRNA common peak12391 4 4717998 4718193 + Intergenic -14103 AT4G07932 AT4G07932 - hypothetical protein protein-coding VNsp peak12395 4 4801861 4802333 + TTS (AT4G07960.1) 3240 AT4G07960 CSLC12 ATCSLC12|CELLULOSE-SYNTHASE LIKE C12|Cellulose-synthase-like C12|F1K3.3|F1K3_3 Cellulose-synthase-like C12 protein-coding VNsp peak12396 4 4805332 4805639 + promoter-TSS (AT4G07960.2) -148 AT4G07960 CSLC12 ATCSLC12|CELLULOSE-SYNTHASE LIKE C12|Cellulose-synthase-like C12|F1K3.3|F1K3_3 Cellulose-synthase-like C12 protein-coding VNsp peak12397 4 4828635 4829623 + promoter-TSS (AT4G07990.3) 22 AT4G07990 AT4G07990 - Chaperone DnaJ-domain superfamily protein protein-coding common peak12398 4 4843993 4844645 + promoter-TSS (AT4G07995.1) -505 AT4G07995 AT4G07995 - hypothetical protein protein-coding VNsp peak12400 4 4866115 4867245 + promoter-TSS (AT4G08035.2) 36 AT4G08035 AT4G08035 - ncRNA ncRNA common peak12401 4 4870128 4870861 + Intergenic 3850 AT4G08035 AT4G08035 - ncRNA ncRNA VNsp peak12409 4 4992162 4992558 + Intergenic -11736 AT4G08097 AT4G08097 - hypothetical protein protein-coding VNsp peak12410 4 5006118 5007211 + TTS (AT4G08097.1) 2568 AT4G08097 AT4G08097 - hypothetical protein protein-coding VNsp peak12411 4 5033567 5034131 + Intergenic -13363 at4g08116 VNsp peak12412 4 5036658 5037782 + Intergenic -16734 at4g08116 VNsp peak12419 4 5166698 5167376 + exon (AT4G08170.3, exon 1 of 11) 138 AT4G08170 AT4G08170 T12G13.10|T12G13_10 Inositol 1,3,4-trisphosphate 5/6-kinase family protein protein-coding common peak12422 4 5185521 5187776 + promoter-TSS (AT4G08210.1) -742 AT4G08210 AT4G08210 T12G13.50|T12G13_50 Pentatricopeptide repeat (PPR-like) superfamily protein protein-coding common peak12423 4 5188692 5189759 + intron (AT4G08230.1, intron 1 of 3) 419 AT4G08230 AT4G08230 T12G13.70|T12G13_70 glycine-rich protein protein-coding common peak12424 4 5194642 5195394 + intron (AT4G08240.1, intron 1 of 2) 347 AT4G08240 AT4G08240 T12G13.80|T12G13_80 histone-lysine N-methyltransferase protein-coding common peak12426 4 5200574 5200823 + promoter-TSS (AT4G08260.1) -149 AT4G08260 AT4G08260 T12G13.100|T12G13_100 Protein phosphatase 2C family protein protein-coding VNsp peak12427 4 5210815 5212359 + TTS (AT4G08263.1) 550 AT4G08263 AT4G08263 - DNA-binding storekeeper protein transcriptional regulator-like protein protein-coding common peak12429 4 5251690 5252880 + promoter-TSS (AT4G08310.1) 42 AT4G08310 AT4G08310 T12G13.150|T12G13_150 DNA ligase protein-coding common peak12431 4 5286058 5286965 + exon (AT4G08350.1, exon 1 of 22) 353 AT4G08350 GTA2 GTA02|SPT5-2|T28D5.40|T28D5_40|global transcription factor group A2 global transcription factor group A2 protein-coding common peak12435 4 5314641 5315205 + promoter-TSS (AT4G08390.5) 18 AT4G08390 SAPX STROMAL ASCORBATE PEROXIDASE|T28D5.80|T28D5_80|stromal ascorbate peroxidase stromal ascorbate peroxidase protein-coding common peak12437 4 5326135 5326512 + promoter-TSS (AT4G08400.1) -949 AT4G08400 AT4G08400 T28D5.90|T28D5_90 Proline-rich extensin-like family protein protein-coding VNsp peak12438 4 5331705 5332839 + promoter-TSS (AT4G08406.1) -363 AT4G08406 AT4G08406 - transmembrane protein protein-coding VNsp peak12439 4 5342201 5342920 + Intergenic -1351 AT4G08410 AT4G08410 T28D5.100|T28D5_100 Proline-rich extensin-like family protein protein-coding VNsp peak12443 4 5375516 5376867 + promoter-TSS (AT4G05535.1) 477 AT4G08455 AT4G08455 - BTB/POZ domain-containing protein protein-coding common peak12444 4 5377243 5377435 + TTS (AT4G08455.1) 1625 AT4G08455 AT4G08455 - BTB/POZ domain-containing protein protein-coding common peak12447 4 5403180 5403636 + TTS (AT4G08500.1) 3912 AT4G08500 MEKK1 ARAKIN|ATMEKK1|MAPK/ERK kinase kinase 1|MAPKKK8|T15F16.5|T15F16_5 MAPK/ERK kinase kinase 1 protein-coding VNsp peak12451 4 5423112 5423379 + Intergenic 1388 AT4G08530 AT4G08530 T15F16.16|T15F16_16 non-specific lipid-transfer-like protein protein-coding VNsp peak12456 4 5459043 5459346 + Intergenic -2204 AT4G08580 AT4G08580 T3F12.11 microfibrillar-associated protein-like protein protein-coding VNsp peak12459 4 5500579 5502185 + exon (AT4G08620.1, exon 4 of 13) 1069 AT4G08620 SULTR1;1 SULTR1.2|sulphate transporter 1;1 sulfate transporter 1;1 protein-coding common peak12460 4 5511746 5512476 + promoter-TSS (AT4G08630.2) -65 AT4G08630 AT4G08630 T3F12.6|T3F12_6 fas-binding factor-like protein protein-coding VNsp peak12461 4 5519959 5520617 + Intergenic 6975 AT4G08640 AT4G08640 T3F12.5|T3F12_5 ATP binding protein protein-coding VNsp peak12463 4 5554569 5554774 + TTS (AT4G08691.1) -1455 AT4G08690 AT4G08690 T32A17.1 Sec14p-like phosphatidylinositol transfer family protein protein-coding VNsp peak12464 4 5555956 5556485 + exon (AT4G08691.1, exon 1 of 2) 396 AT4G08691 AT4G08691 - hypothetical protein protein-coding common peak12468 4 5602838 5603105 + Intergenic -1134 AT4G08780 AT4G08780 T32A17.90|T32A17_90 Peroxidase superfamily protein protein-coding VNsp peak12469 4 5610261 5611462 + intron (AT4G08790.1, intron 1 of 8) 354 AT4G08790 AT4G08790 T32A17.100|T32A17_100 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein protein-coding common peak12470 4 5617736 5619162 + promoter-TSS (AT4G08810.1) -383 AT4G08810 SUB1 T32A17.120|T32A17_120 calcium ion binding protein protein-coding common peak12471 4 5637548 5638950 + exon (AT4G08850.2, exon 1 of 1) 2387 AT4G08850 AT4G08850 T32A17.160|T32A17_160 Leucine-rich repeat receptor-like protein kinase family protein protein-coding common peak12474 4 5697890 5698873 + TTS (AT4G05655.1) 485 AT4G08895 AT4G08895 - inorganic phosphate transporter family protein protein-coding common peak12476 4 5703271 5705145 + exon (AT4G08900.1, exon 3 of 6) 897 AT4G08900 ARGAH1 arginine amidohydrolase 1 arginase protein-coding common peak12478 4 5731739 5732535 + promoter-TSS (AT4G08940.1) 58 AT4G08940 AT4G08940 T3H13.12|T3H13_12 Ubiquitin carboxyl-terminal hydrolase family protein protein-coding common peak12483 4 5783566 5784106 + promoter-TSS (AT4G09020.1) -73 AT4G09020 ISA3 ATISA3|F23J3.50|F23J3_50|isoamylase 3 isoamylase 3 protein-coding common peak12484 4 5788965 5789412 + TTS (AT4G09020.1) -2949 AT4G09030 AGP10 ATAGP10|F23J3.60|F23J3_60|arabinogalactan protein 10 arabinogalactan protein 10 protein-coding common peak12485 4 5796846 5797784 + promoter-TSS (AT4G09040.2) 60 AT4G09040 AT4G09040 F23J3.70|F23J3_70 RNA-binding (RRM/RBD/RNP motifs) family protein protein-coding common peak12491 4 5828210 5829275 + exon (AT4G09150.2, exon 1 of 12) 223 AT4G09150 AT4G09150 F23J3.180|F23J3_180 T-complex protein 11 protein-coding common peak12492 4 5833176 5834088 + TTS (AT4G09150.2) -1388 AT4G09153 LCR36 low-molecular-weight cysteine-rich 36 low-molecular-weight cysteine-rich 36 protein-coding common peak12496 4 5896037 5897061 + Intergenic -2212 AT4G09300 AT4G09300 T30A10.60|T30A10_60 LisH and RanBPM domains containing protein protein-coding VNsp peak12500 4 5927038 5928073 + exon (AT4G09340.1, exon 1 of 10) 183 AT4G09340 AT4G09340 AT4G09330|T30A10.100|T30A10_100 SPla/RYanodine receptor (SPRY) domain-containing protein protein-coding common peak12503 4 5983006 5984409 + promoter-TSS (AT4G09440.1) 430 AT4G09450 AT4G09450 T15G18.130|T15G18_130 Duplicated homeodomain-like superfamily protein protein-coding common peak12505 4 5991960 5992440 + promoter-TSS (AT4G09460.1) -708 AT4G09460 MYB6 ATMYB6|AtMYB6|T15G18.120|T15G18_120|myb domain protein 6 myb domain protein 6 protein-coding VNsp peak12508 4 6026569 6027745 + promoter-TSS (AT4G09520.1) -34 AT4G09520 AT4G09520 T15G18.60|T15G18_60 Cofactor-independent phosphoglycerate mutase protein-coding common peak12519 4 6116437 6117636 + exon (AT4G09680.1, exon 1 of 16) 274 AT4G09680 CTC1 ATCTC1|F17A8.30|F17A8_30|conserved telomere maintenance component 1 conserved telomere maintenance component 1 protein-coding common peak12520 4 6126038 6126386 + TTS (AT4G09690.1) 1315 AT4G09690 AT4G09690 F17A8.40|F17A8_40 Cysteine/Histidine-rich C1 domain family protein protein-coding VNsp peak12521 4 6132709 6133259 + promoter-TSS (AT4G09720.3) 67 AT4G09720 RABG3A ATRABG3A|F17A8.70|F17A8_70|RAB GTPase homolog G3A RAB GTPase homolog G3A protein-coding common peak12522 4 6135556 6136608 + promoter-TSS (AT4G09730.1) -162 AT4G09730 RH39 F17A8.80|F17A8_80 RH39 protein-coding common peak14720 4 18242829 18243285 + TTS (AT4G39180.1) -1242 AT4G09815 AT4G09815 - ncRNA ncRNA VNsp peak12532 4 6215275 6216194 + TTS (AT4G09880.1) 1110 AT4G09880 AT4G09880 T5L19.10|T5L19_10 hypothetical protein protein-coding VNsp peak12535 4 6234637 6235996 + exon (AT4G09950.1, exon 2 of 5) 143 AT4G09950 AT4G09950 T5L19.80|T5L19_80 P-loop containing nucleoside triphosphate hydrolases superfamily protein protein-coding VNsp peak12539 4 6251422 6252405 + exon (AT4G09980.2, exon 1 of 6) 380 AT4G09980 EMB1691 EMBRYO DEFECTIVE 1691|T5L19.110|T5L19_110 Methyltransferase MT-A70 family protein protein-coding common peak12545 4 6295921 6296366 + TTS (AT4G10060.2) 3724 AT4G10070 AT4G10070 F28M11.1 KH domain-containing protein protein-coding common peak12546 4 6299636 6300622 + promoter-TSS (AT4G10070.1) -262 AT4G10070 AT4G10070 F28M11.1 KH domain-containing protein protein-coding common peak12548 4 6321199 6322811 + promoter-TSS (AT4G10130.2) -308 AT4G10140 AT4G10140 F28M11.60|F28M11_60 transmembrane protein protein-coding common peak12551 4 6338355 6338803 + Intergenic 2660 AT4G10160 AT4G10160 T9A4.20 RING/U-box superfamily protein protein-coding common peak12554 4 6352378 6353664 + promoter-TSS (AT4G10200.2) 64 AT4G10200 AT4G10200 T9A4.11 TTF-type zinc finger protein with HAT dimerization domain-containing protein protein-coding common peak12559 4 6396722 6397328 + TTS (AT4G10320.1) 5171 AT4G10310 HKT1 ATHKT1|HKT1;1|T9A4.5|high-affinity K+ transporter 1 high-affinity K+ transporter 1 protein-coding common peak12568 4 6444289 6445653 + Intergenic -1417 AT4G10390 AT4G10390 F7L13.4 Protein kinase superfamily protein protein-coding common peak12573 4 6478534 6479724 + promoter-TSS (AT4G10480.1) 36 AT4G10480 AT4G10480 F7L13.60|F7L13_60 Nascent polypeptide-associated complex (NAC), alpha subunit family protein protein-coding common peak12578 4 6503163 6504013 + TTS (AT4G10520.1) 3794 AT4G10520 AT4G10520 F7L13.100|F7L13_100 Subtilase family protein protein-coding common peak12580 4 6527476 6528529 + exon (AT4G10570.1, exon 1 of 13) 328 AT4G10570 UBP9 T4F9.30|T4F9_30|ubiquitin-specific protease 9 ubiquitin-specific protease 9 protein-coding common peak12584 4 6554778 6555059 + Intergenic -2064 AT4G10610 CID12 ATRBP37|CTC-interacting domain 12|RBP37|RNA-BINDING PROTEIN 37|T4F9.70|T4F9_70 CTC-interacting domain 12 protein-coding common peak12587 4 6566766 6568115 + TTS (AT4G10620.1) 300 AT4G10630 AT4G10630 T4F9.90|T4F9_90 Glutaredoxin family protein protein-coding common peak12589 4 6573537 6574287 + exon (AT4G10650.1, exon 7 of 7) 2018 AT4G10640 IQD16 IQ-domain 16|T4F9.100|T4F9_100 IQ-domain 16 protein-coding common peak12592 4 6588556 6588885 + TTS (AT4G10680.1) 1199 AT4G10680 AT4G10680 T12H20.17 transcription factor IIB (TFIIB) family protein protein-coding common peak12596 4 6618133 6619785 + promoter-TSS (AT4G10740.1) 283 AT4G10750 AT4G10750 - Phosphoenolpyruvate carboxylase family protein protein-coding common peak12610 4 6679559 6679788 + promoter-TSS (AT4G10860.1) -165 AT4G10860 AT4G10860 F25I24.70|F25I24_70 hypothetical protein protein-coding VNsp peak12611 4 6680131 6681369 + Intergenic -1242 AT4G10860 AT4G10860 F25I24.70|F25I24_70 hypothetical protein protein-coding VNsp peak12616 4 6718006 6719127 + promoter-TSS (AT4G10960.1) -16 AT4G10960 UGE5 F25I24.170|F25I24_170|UDP-D-glucose/UDP-D-galactose 4-epimerase 5 UDP-D-glucose/UDP-D-galactose 4-epimerase 5 protein-coding common peak12633 4 6804681 6806453 + exon (AT4G11160.1, exon 7 of 9) 2030 AT4G11160 AT4G11160 T22B4.140|T22B4_140 Translation initiation factor 2, small GTP-binding protein protein-coding common peak12638 4 6822369 6822605 + Intergenic 2454 AT4G11180 AT4G11180 DP1|T22B4.160|T22B4_160|dirigent protein 1 Disease resistance-responsive (dirigent-like protein) family protein protein-coding VNsp peak12647 4 6863403 6864042 + promoter-TSS (AT4G11280.1) -257 AT4G11280 ACS6 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6|ATACS6|F8L21.70|F8L21_70 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 protein-coding common peak12656 4 6905558 6906770 + promoter-TSS (AT4G11355.1) 316 AT4G11360 RHA1B F8L21.150|F8L21_150|RING-H2 FINGER PROTEIN RHA1B|RING-H2 finger A1B RING-H2 finger A1B protein-coding common peak12657 4 6919936 6921055 + promoter-TSS (AT4G11380.2) 6 AT4G11380 AT4G11380 - Adaptin family protein protein-coding common peak12664 4 6953404 6953851 + exon (AT4G11430.1, exon 2 of 2) 828 AT4G11430 AT4G11430 F25E4.50|F25E4_50 hydroxyproline-rich glycoprotein family protein protein-coding VNsp peak12679 4 7042327 7043976 + TTS (AT4G05910.1) 797 AT4G11660 AT-HSFB2B HEAT SHOCK TRANSCRIPTION FACTOR B2B|HEAT SHOCK TRANSCRIPTION FACTOR B2B|HSF7|HSFB2B|T5C23.90|T5C23_90 winged-helix DNA-binding transcription factor family protein protein-coding common peak12684 4 7072449 7072840 + exon (AT4G11740.2, exon 3 of 11) 877 AT4G11740 SAY1 T5C23.170|T5C23_170 Ubiquitin-like superfamily protein protein-coding common peak12688 4 7099440 7100015 + exon (AT4G11800.1, exon 1 of 16) 128 AT4G11800 AT4G11800 T26M18.10|T26M18_10 Calcineurin-like metallo-phosphoesterase superfamily protein protein-coding common peak12689 4 7103005 7104763 + promoter-TSS (AT4G11810.1) -626 AT4G11810 AT4G11810 T26M18.20|T26M18_20 Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein protein-coding common peak12690 4 7108042 7109319 + TTS (AT4G11810.1) 3133 AT4G11820 HMGS EMB2778|EMBRYO DEFECTIVE 2778|FKP1|FLAKY POLLEN 1|HMG-COA SYNTHASE|HYDROXYMETHYLGLUTARYL-COA SYNTHASE|MVA1|T26M18.30|T26M18_30 hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase protein-coding VNsp peak12693 4 7120475 7121305 + intron (AT4G11830.1, intron 1 of 11) 355 AT4G11830 PLDGAMMA2 AT4G11835|T26M18.40|T26M18_40|phospholipase D gamma 2 phospholipase D gamma 2 protein-coding common peak12697 4 7138357 7139980 + promoter-TSS (AT4G11860.1) -658 AT4G11860 AT4G11860 T26M18.70|T26M18_70 FAM63A-like protein (DUF544) protein-coding common peak12709 4 7231798 7232647 + TTS (ENSRNA049492449-T1) 403 AT4G12070 AT4G12070 F16J13.140|F16J13_140 hypothetical protein protein-coding common peak12719 4 7283860 7284728 + promoter-TSS (AT4G12230.1) -180 AT4G12230 AT4G12230 T4C9.70|T4C9_70 alpha/beta-Hydrolases superfamily protein protein-coding common peak12720 4 7290131 7291559 + exon (AT4G12250.1, exon 1 of 1) 275 AT4G12250 GAE5 T4C9.90|T4C9_90|UDP-D-glucuronate 4-epimerase 5 UDP-D-glucuronate 4-epimerase 5 protein-coding common peak12722 4 7298249 7299602 + exon (AT4G12270.1, exon 1 of 3) 1160 AT4G12270 AT4G12270 T4C9.110|T4C9_110 Copper amine oxidase family protein protein-coding common peak12732 4 7349356 7350316 + exon (AT4G12420.2, exon 9 of 10) 3281 AT4G12420 SKU5 T1P17.10|T1P17_10 Cupredoxin superfamily protein protein-coding common peak12734 4 7364451 7366194 + TTS (AT4G12430.1) 3408 AT4G12430 TPPF T1P17.20|T1P17_20|trehalose-6-phosphate phosphatase F Haloacid dehalogenase-like hydrolase (HAD) superfamily protein protein-coding common peak12735 4 7368704 7371220 + Intergenic -1232 AT4G12430 TPPF T1P17.20|T1P17_20|trehalose-6-phosphate phosphatase F Haloacid dehalogenase-like hydrolase (HAD) superfamily protein protein-coding common peak12739 4 7390505 7391540 + promoter-TSS (AT4G12460.4) -186 AT4G12460 ORP2B OSBP(oxysterol binding protein)-related protein 2B|T1P17.50|T1P17_50 OSBP(oxysterol binding protein)-related protein 2B protein-coding common peak12743 4 7424312 7425190 + Intergenic -2923 AT4G12520 AT4G12520 T1P17.110 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein protein-coding common peak12756 4 7481427 7481627 + TTS (AT4G12700.1) 886 AT4G12690 AT4G12690 T20K18.40|T20K18_40 DUF868 family protein (DUF868) protein-coding common peak12764 4 7524777 7525382 + Intergenic -1100 AT4G12810 AT4G12810 T20K18.160|T20K18_160 F-box family protein protein-coding VNsp peak12766 4 7530697 7530987 + promoter-TSS (AT4G12830.1) -299 AT4G12830 AT4G12830 T20K18.180|T20K18_180 alpha/beta-Hydrolases superfamily protein protein-coding common peak12768 4 7537824 7539398 + TTS (AT4G12850.3) 291 AT4G12860 UNE14 T20K18.210|T20K18_210|unfertilized embryo sac 14 EF hand calcium-binding protein family protein-coding VNsp peak12770 4 7567230 7567799 + promoter-TSS (AT4G12920.1) -772 AT4G12920 UND F25G13.10|F25G13_10|UNDEAD Eukaryotic aspartyl protease family protein protein-coding common peak12781 4 7617260 7618009 + exon (AT4G13050.1, exon 1 of 6) 206 AT4G13050 AT4G13050 F25G13.140|F25G13_140 Acyl-ACP thioesterase protein-coding common peak12783 4 7624824 7625855 + promoter-TSS (AT4G13075.1) -78 AT4G13075 RALFL30 RALF-like 30 RALF-like 30 protein-coding VNsp peak12792 4 7679778 7681232 + exon (AT4G13240.1, exon 2 of 7) 555 AT4G13240 ROPGEF9 ATROPGEF9|F17N18.130|F17N18_130|KINASE PARTNER PROTEIN-LIKE|KPP-LIKE|RHO guanyl-nucleotide exchange factor 9|ROP (rho of plants) guanine nucleotide exchange factor 9 RHO guanyl-nucleotide exchange factor 9 protein-coding VNsp peak12795 4 7688068 7688548 + Intergenic -1302 AT4G13250 NYC1 F17N18.140|F17N18_140|NON-YELLOW COLORING 1 NAD(P)-binding Rossmann-fold superfamily protein protein-coding VNsp peak12802 4 7730430 7731736 + promoter-TSS (AT4G13270.1) -106 AT4G13270 AT4G13270 T9E8.10|T9E8_10 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family protein-coding common peak12808 4 7761014 7762447 + TTS (AT4G13340.1) -3330 AT4G13345 MEE55 maternal effect embryo arrest 55 Serinc-domain containing serine and sphingolipid biosynthesis protein protein-coding common peak12810 4 7774626 7775497 + promoter-TSS (AT4G13360.1) 41 AT4G13360 AT4G13360 T9E8.100|T9E8_100 ATP-dependent caseinolytic (Clp) protease/crotonase family protein protein-coding common peak12815 4 7796847 7798097 + exon (AT4G13420.1, exon 9 of 9) -1431 AT4G13410 ATCSLA15 CELLULOSE SYNTHASE LIKE A15|CSLA15|T9E8.150|T9E8_150 Nucleotide-diphospho-sugar transferases superfamily protein protein-coding common peak12824 4 7841924 7843675 + promoter-TSS (AT4G13495.1) -168 AT4G13495 AT4G13495 - ncRNA ncRNA common peak12835 4 7893275 7893915 + exon (AT4G13575.1, exon 1 of 6) 132 AT4G13575 AT4G13575 - hypothetical protein protein-coding common peak12841 4 7926203 7927602 + Intergenic 2767 AT4G13615 AT4G13615 - Uncharacterized protein family SERF protein-coding common peak12843 4 7933664 7934372 + TTS (AT4G13620.1) 1887 AT4G13620 AT4G13620 F18A5.10|F18A5_10 Integrase-type DNA-binding superfamily protein protein-coding common peak12850 4 7974140 7975629 + promoter-TSS (AT4G13750.1) -180 AT4G13750 NOV EMB2597|EMBRYO DEFECTIVE 2597|F18A5.140|F18A5_140|NO VEIN Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein protein-coding common peak12870 4 8090352 8090806 + promoter-TSS (AT4G14000.1) -214 AT4G14000 AT4G14000 DL3040W|FCAALL.136 Putative methyltransferase family protein protein-coding common peak12886 4 8197704 8198601 + promoter-TSS (AT4G14225.1) -625 AT4G14225 AT4G14225 - A20/AN1-like zinc finger family protein protein-coding common peak12898 4 8270989 8271650 + promoter-TSS (AT4G14360.2) -143 AT4G14360 AT4G14360 DL3220C|FCAALL.222 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein protein-coding common peak12907 4 8320730 8321902 + exon (AT4G14465.1, exon 1 of 1) 778 AT4G14465 AHL20 AT-hook motif nuclear-localized protein 20 AT-hook motif nuclear-localized protein 20 protein-coding common peak12910 4 8343957 8345204 + promoter-TSS (AT4G14530.1) 231 AT4G14540 NF-YB3 ''nuclear factor Y|DL3310W|FCAALL.252|nuclear factor Y|subunit B3|subunit B3'' nuclear factor Y, subunit B3 protein-coding common peak12913 4 8368887 8369886 + promoter-TSS (AT4G14580.1) -74 AT4G14580 CIPK4 CBL-interacting protein kinase 4|DL3330C|FCAALL.259|SNF1-RELATED PROTEIN KINASE 3.3|SnRK3.3 CBL-interacting protein kinase 4 protein-coding common peak12916 4 8383089 8384773 + exon (AT4G14615.1, exon 1 of 2) 204 AT4G14615 AT4G14615 - sporulation-specific protein protein-coding common peak12925 4 8421950 8422345 + promoter-TSS (AT4G14700.1) -26 AT4G14700 ORC1A ATORC1A|DL3390W|FCAALL.93|origin recognition complex 1 origin recognition complex 1 protein-coding common peak12943 4 8503066 8504485 + promoter-TSS (AT4G14810.1) -370 AT4G14810 AT4G14810 DL3445W|FCAALL.327 hypothetical protein protein-coding common peak12953 4 8549962 8550682 + promoter-TSS (AT4G14965.2) 108 AT4G14960 TUA6 Tubulin alpha-6 Tubulin/FtsZ family protein protein-coding common peak12965 4 8632915 8633568 + promoter-TSS (AT4G15110.1) -123 AT4G15110 CYP97B3 ''cytochrome P450|DL3600C|FCAALL.208|cytochrome P450|family 97|polypeptide 3|polypeptide 3''|subfamily B cytochrome P450, family 97, subfamily B, polypeptide 3 protein-coding common peak12966 4 8634110 8635682 + exon (AT4G15120.1, exon 1 of 1) 388 AT4G15120 AT4G15120 DL3605W|FCAALL.67 VQ motif-containing protein protein-coding common peak12968 4 8639925 8640611 + promoter-TSS (AT4G15140.1) 23 AT4G15140 AT4G15140 DL3615C|FCAALL.236 hypothetical protein protein-coding common peak12974 4 8662092 8663466 + TTS (AT4G15200.4) 2980 AT4G15200 FH3 AFH3|DL3645C|FCAALL.218|formin 3 formin 3 protein-coding VNsp peak12975 4 8665229 8666044 + TTS (AT4G15210.3) 123 AT4G15200 FH3 AFH3|DL3645C|FCAALL.218|formin 3 formin 3 protein-coding common peak12981 4 8705303 8705968 + promoter-TSS (AT4G15240.1) -17 AT4G15240 AT4G15240 DL3665C|FCAALL.244 glycosyltransferase (DUF604) protein-coding common peak13001 4 8864200 8866129 + TTS (AT4G15520.1) 2420 AT4G15520 AT4G15520 DL3800W|FCAALL.322 tRNA/rRNA methyltransferase (SpoU) family protein protein-coding VNsp peak13002 4 8866582 8866813 + exon (AT4G15530.7, exon 9 of 17) 2622 AT4G15530 PPDK DL3805C|FCAALL.325|pyruvate orthophosphate dikinase pyruvate orthophosphate dikinase protein-coding common peak13015 4 8939746 8940578 + exon (AT4G15710.1, exon 1 of 3) 985 AT4G15710 AT4G15710 DL3895W|FCAALL.366 cystatin-like protein protein-coding common peak13016 4 8944556 8945857 + exon (AT4G15715.1, exon 1 of 3) 199 AT4G15715 AT4G15715 - Proteinase inhibitor I25, cystatin, conserved region protein-coding common peak13019 4 8964818 8966112 + exon (AT4G15740.1, exon 1 of 1) 886 AT4G15740 AT4G15740 DL3910C|FCAALL.373 Calcium-dependent lipid-binding (CaLB domain) family protein protein-coding common peak13033 4 9052600 9053355 + exon (AT4G15975.1, exon 1 of 1) 1106 AT4G15975 AT4G15975 - RING/U-box superfamily protein protein-coding common peak13042 4 9116521 9117159 + TTS (AT4G16110.1) 2539 AT4G16120 COBL7 ARABIDOPSIS THALIANA SEC61 BETA 1|ATSEB1|COBRA-like protein-7 precursor|DL4100C|FCAALL.104|SEB1|SEC61 BETA 1 COBRA-like protein-7 precursor protein-coding VNsp peak13049 4 9147393 9148150 + promoter-TSS (AT4G16150.1) -288 AT4G16150 AT4G16150 DL4115W|FCAALL.291 calmodulin-binding transcription activator 5 protein-coding common peak13053 4 9177081 9178533 + exon (AT4G16210.1, exon 1 of 3) 332 AT4G16210 ECHIA DL4145C|E-COAH-2|ENOYL-COA HYDRATASE 2|FCAALL.314|enoyl-CoA hydratase/isomerase A enoyl-CoA hydratase/isomerase A protein-coding common peak13059 4 9198106 9198378 + exon (AT4G16250.1, exon 1 of 4) 1598 AT4G16250 PHYD DL4165C|FCAALL.323|PHYTOCHROME D|phytochrome D phytochrome D protein-coding common peak13063 4 9205983 9206276 + TTS (AT4G16280.4) 1049 AT4G16270 AT4G16270 DL4175W|FCAALL.329 peroxidase superfamily protein protein-coding common peak13067 4 9236219 9236724 + intron (AT4G16340.2, intron 13 of 29) 4913 AT4G16340 SPK1 DL4200C|FCAALL.346|SPIKE1 guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein protein-coding VNsp peak13071 4 9265731 9267486 + promoter-TSS (AT4G16420.1) -451 AT4G16420 ADA2B DL4235C|FCAALL.57|PROPORZ1|PRZ1|homolog of yeast ADA2 2B ADA2 2B protein-coding common peak13084 4 9316737 9317312 + intron (AT4G16540.3, intron 1 of 3) 129 AT4G16540 AT4G16540 DL4295C|FCAALL.391 Heat shock protein HSP20/alpha crystallin family protein-coding common peak13089 4 9335599 9336144 + promoter-TSS (AT4G16570.1) 97 AT4G16566 HINT4 histidine triad nucleotide-binding 4 histidine triad nucleotide-binding 4 protein-coding common peak13090 4 9340671 9343246 + exon (AT4G16580.1, exon 1 of 1) 1116 AT4G16580 AT4G16580 DL4315C|FCAALL.400 Protein phosphatase 2C family protein protein-coding common peak13107 4 9424860 9425235 + exon (AT4G16760.2, exon 14 of 14) -3190 AT4G16750 AT4G16750 DL4400C|FCAALL.19 Integrase-type DNA-binding superfamily protein protein-coding VNsp peak13108 4 9428956 9430098 + promoter-TSS (AT4G16760.2) -632 AT4G16760 ACX1 ATACX1|DL4405C|FCAALL.119|acyl-CoA oxidase 1 acyl-CoA oxidase 1 protein-coding common peak13109 4 9432362 9433164 + promoter-TSS (AT4G16765.2) 8 AT4G16765 AT4G16765 - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein protein-coding common peak13121 4 9485686 9486025 + Intergenic -1942 AT4G16857 AT4G16857 - disease resistance protein (TIR-NBS-LRR class) family protein protein-coding VNsp peak13122 4 9490124 9490849 + exon (AT4G16860.1, exon 3 of 6) 1914 AT4G16860 RPP4 DL4460C|FCAALL.47|recognition of peronospora parasitica 4 Disease resistance protein (TIR-NBS-LRR class) family protein-coding VNsp peak13123 4 9500189 9501212 + exon (AT4G16890.5, exon 6 of 6) -3387 AT4G16880 AT4G16880 DL4470C|FCAALL.50 Leucine-rich repeat (LRR) family protein protein-coding common peak13125 4 9518461 9520046 + TTS (AT4G16920.1) 2529 AT4G16915 AT4G16915 - hypothetical protein protein-coding common peak13129 4 9537582 9538190 + promoter-TSS (AT4G16940.1) 32 AT4G16940 AT4G16940 DL4500C|FCAALL.313 Disease resistance protein (TIR-NBS-LRR class) family protein-coding VNsp peak13131 4 9542344 9544352 + exon (AT4G16950.4, exon 2 of 7) 1119 AT4G16950 RPP5 DISEASE RESISTANCE PROTEIN RPP5|DL4505C|FCAALL.315|RECOGNITION OF PERONOSPORA PARASITICA 5 Disease resistance protein (TIR-NBS-LRR class) family protein-coding common peak13132 4 9545388 9546114 + promoter-TSS (AT4G16950.2) -996 AT4G16950 RPP5 DISEASE RESISTANCE PROTEIN RPP5|DL4505C|FCAALL.315|RECOGNITION OF PERONOSPORA PARASITICA 5 Disease resistance protein (TIR-NBS-LRR class) family protein-coding VNsp peak13133 4 9548266 9549161 + intron (AT4G16960.1, intron 3 of 4) -1373 AT4G16957 AT4G16957 - SUPPRESSOR OF, CONSTITUTIVE protein protein-coding VNsp peak13134 4 9555236 9557097 + promoter-TSS (AT4G16970.1) -301 AT4G16970 AT4G16970 DL4515C|FCAALL.319 Protein kinase superfamily protein protein-coding common peak13139 4 9575520 9576459 + exon (AT4G17010.1, exon 1 of 4) 177 AT4G17010 AT4G17010 DL4535W|FCAALL.229 transcription factor IIIB protein-coding common peak13146 4 9620830 9621309 + exon (AT4G17140.3, exon 47 of 65) -8414 AT4G17100 AT4G17100 DL4585C|FCAALL.349 poly(U)-specific endoribonuclease-B protein protein-coding VNsp peak13150 4 9653908 9654686 + promoter-TSS (AT4G17210.1) 12 AT4G17210 AT4G17210 DL4640C|FCAALL.382 weak chloroplast movement under blue light protein (DUF827) protein-coding common peak13153 4 9675237 9676353 + promoter-TSS (AT4G17270.1) -261 AT4G17270 AT4G17270 DL4670W|FCAALL.22 Mo25 family protein protein-coding common peak13155 4 9688923 9689343 + exon (AT4G17330.3, exon 18 of 18) -2131 AT4G17310 AT4G17310 DL4690C|FCAALL.398 hypothetical protein protein-coding VNsp peak13193 4 9880790 9881912 + TTS (AT4G17785.2) 104 AT4G17780 AT4G17780 DL4925C|FCAALL.161 F-box and associated interaction domains-containing protein protein-coding common peak13219 4 10024636 10025342 + exon (AT4G18050.2, exon 8 of 12) 2784 AT4G18050 ABCB9 ATP-binding cassette B9|F15J5.20|F15J5_20|P-glycoprotein 9|P-glycoprotein 9|PGP9 P-glycoprotein 9 protein-coding common peak13220 4 10026019 10027266 + TTS (AT4G18060.1) 3391 AT4G18060 AT4G18060 F15J5.30|F15J5_30 SH3 domain-containing protein protein-coding common peak13246 4 10151291 10152839 + promoter-TSS (AT4G18375.3) -5 AT4G18372 AT4G18372 - Small nuclear ribonucleoprotein family protein protein-coding common peak13250 4 10175161 10177020 + TTS (AT4G18422.1) 548 AT4G18422 AT4G18422 - transmembrane protein protein-coding VNsp peak13262 4 10238657 10239871 + TTS (AT4G18593.1) 271 AT4G18596 AT4G18596 - Pollen Ole e 1 allergen and extensin family protein protein-coding VNsp peak13271 4 10289056 10292405 + exon (AT4G18700.1, exon 1 of 1) 328 AT4G18700 CIPK12 ATWL4|CBL-interacting protein kinase 12|F28A21.110|F28A21_110|PKS8|SNF1-RELATED PROTEIN KINASE 3.9|SnRK3.9|WL4|WPL4-LIKE 4|protein kinase 8 CBL-interacting protein kinase 12 protein-coding common peak13273 4 10299421 10300237 + promoter-TSS (AT4G18720.1) -116 AT4G18720 AT4G18720 F28A21.130|F28A21_130 Transcription factor IIS protein protein-coding common peak13289 4 10401594 10403629 + intron (AT4G18990.2, intron 2 of 2) 1782 AT4G18990 XTH29 F13C5.160|F13C5_160|xyloglucan endotransglucosylase/hydrolase 29 xyloglucan endotransglucosylase/hydrolase 29 protein-coding common peak13294 4 10418884 10419975 + intron (AT4G19020.1, intron 15 of 22) 4058 AT4G19030 NLM1 AT-NLM1|ATNLM1|F13C5.200|F13C5_200|NIP1;1|NOD26-LIKE INTRINSIC PROTEIN 1;1|NOD26-LIKE MAJOR INTRINSIC PROTEIN 1|NOD26-like major intrinsic protein 1 NOD26-like major intrinsic protein 1 protein-coding VNsp peak13297 4 10429506 10432262 + TTS (AT4G19040.1) 158 AT4G19038 LCR15 low-molecular-weight cysteine-rich 15 low-molecular-weight cysteine-rich 15 protein-coding common peak13307 4 10482369 10484453 + exon (AT4G19170.1, exon 1 of 1) 1792 AT4G19170 NCED4 CCD4|T18B16.140|T18B16_140|carotenoid cleavage dioxygenase 4|nine-cis-epoxycarotenoid dioxygenase 4 nine-cis-epoxycarotenoid dioxygenase 4 protein-coding common peak13309 4 10493120 10493691 + exon (AT4G19190.1, exon 1 of 7) 205 AT4G19190 AT4G19190 T18B16.160|T18B16_160 zinc knuckle (CCHC-type) family protein protein-coding common peak13326 4 10610241 10612027 + exon (AT4G19460.1, exon 1 of 1) 1001 AT4G19460 AT4G19460 F24J7.20|F24J7_20 UDP-Glycosyltransferase superfamily protein protein-coding common peak13329 4 10627141 10628217 + exon (AT4G19500.1, exon 2 of 5) 2117 AT4G19500 AT4G19500 F24J7.60|F24J7_60 nucleoside-triphosphatase/transmembrane receptor/nucleotide binding/ATP binding protein protein-coding VNsp peak13354 4 10759581 10761039 + TTS (AT4G19800.1) 1794 AT4G19800 AT4G19800 T16H5.160|T16H5_160 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein protein-coding common peak13360 4 10792026 10792439 + promoter-TSS (AT4G19900.1) -614 AT4G19900 AT4G19900 F18F4.6|F18F4_6 alpha 1,4-glycosyltransferase family protein protein-coding common peak13382 4 10889209 10891129 + promoter-TSS (AT4G20160.3) -465 AT4G20160 AT4G20160 F1C12.80|F1C12_80 golgin family A protein protein-coding common peak13387 4 10913079 10914142 + exon (AT4G20210.1, exon 7 of 7) -2459 AT4G20200 AT4G20200 F1C12.120|F1C12_120 Terpenoid cyclases/Protein prenyltransferases superfamily protein protein-coding common peak13399 4 10983196 10985166 + promoter-TSS (AT4G20340.2) 340 AT4G20330 AT4G20330 F9F13.2|F9F13_2 Transcription initiation factor TFIIE, beta subunit protein-coding common peak13401 4 10998768 10999347 + Intergenic 3953 AT4G20370 TSF F9F13.20|F9F13_20|TWIN SISTER OF FT PEBP (phosphatidylethanolamine-binding protein) family protein protein-coding VNsp peak13407 4 11035405 11036087 + intron (AT4G20480.2, intron 1 of 3) 128 AT4G20480 AT4G20480 F9F13.130|F9F13_130 Putative endonuclease or glycosyl hydrolase protein-coding common peak13408 4 11042073 11042532 + Intergenic -3610 AT4G20520 AT4G20520 F9F13.170|F9F13_170 RNA binding / RNA-directed DNA polymerase protein-coding VNsp peak13410 4 11097620 11099148 + promoter-TSS (AT4G20690.1) 114 AT4G20700 AT4G20700 F21C20.50|F21C20_50 RNA-binding; reverse transcriptase, putative (DUF1204) protein-coding common peak13417 4 11122355 11123205 + intron (AT4G20735.1, intron 1 of 2) 217 AT4G20735 AT4G20735 - hypothetical protein protein-coding common peak13420 4 11136226 11136685 + promoter-TSS (AT4G20790.1) -32 AT4G20790 AT4G20790 F21C20.140|F21C20_140 Leucine-rich repeat protein kinase family protein protein-coding common peak13421 4 11139347 11140895 + exon (AT4G20800.1, exon 1 of 1) 512 AT4G20800 AT4G20800 F21C20.150|F21C20_150 FAD-binding Berberine family protein protein-coding common peak13438 4 11255752 11256534 + promoter-TSS (AT4G21080.1) -792 AT4G21080 DOF4.5 AtDOF4.5|DNA-binding with One Finger 4.5|F7J7.20|F7J7_20 Dof-type zinc finger domain-containing protein protein-coding common peak13456 4 11348719 11349597 + promoter-TSS (AT4G21330.1) -764 AT4G21330 DYT1 DYSFUNCTIONAL TAPETUM 1|T6K22.60|T6K22_60 basic helix-loop-helix (bHLH) DNA-binding superfamily protein protein-coding common peak13475 4 11448050 11449289 + intron (AT4G21520.2, intron 9 of 12) -1240 AT4G21510 FBS2 AtFBS2|F-box stress induced 2|F18E5.130|F18E5_130 F-box family protein protein-coding VNsp peak13484 4 11509335 11510446 + promoter-TSS (AT4G21660.3) 17 AT4G21660 AT4G21660 F17L22.120|F17L22_120 proline-rich spliceosome-associated (PSP) family protein protein-coding common peak13485 4 11510642 11511721 + exon (AT4G21670.1, exon 1 of 17) 192 AT4G21670 CPL1 ATCPL1|ATCPL2|C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1|C-terminal domain phosphatase-like 1|F17L22.130|F17L22_130|FIERY 2|FRY2|RCF2|SHI4|SHINY 4|regulators of C-REPEAT BINDING FACTOR (CBF) gene expression 2 C-terminal domain phosphatase-like 1 protein-coding common peak13502 4 11603847 11605692 + promoter-TSS (AT4G21880.2) -132 AT4G21870 AT4G21870 T8O5.80|T8O5_80 HSP20-like chaperones superfamily protein protein-coding common peak13511 4 11654769 11655784 + promoter-TSS (AT4G21980.2) -286 AT4G21980 APG8A ATG8A|AUTOPHAGY 8A|AUTOPHAGY-RELATED 8A|F1N20.80|F1N20_80 Ubiquitin-like superfamily protein protein-coding common peak13513 4 11657401 11657935 + TTS (AT4G21980.2) 1437 AT4G21990 APR3 5'-ADENYLYLPHOSPHOSULFATE REDUCTASE|APS reductase 3|ATAPR3|F1N20.90|F1N20_90|PAPS REDUCTASE HOMOLOG 26|PRH-26|PRH26 APS reductase 3 protein-coding common peak13520 4 11701303 11703563 + exon (AT4G22080.1, exon 1 of 4) 352 AT4G22080 RHS14 F1N20.180|F1N20_180|root hair specific 14 root hair specific 14 protein-coding common peak13543 4 11807147 11808594 + promoter-TSS (AT4G22350.2) -453 AT4G22350 AT4G22350 T10I14.180|T10I14_180 Ubiquitin C-terminal hydrolases superfamily protein protein-coding common peak13544 4 11814981 11815818 + promoter-TSS (AT4G22390.2) -235 AT4G22390 AT4G22390 F7K2.3|F7K2_3 F-box associated ubiquitination effector family protein protein-coding common peak13569 4 11968323 11969846 + intron (AT4G22780.1, intron 5 of 5) 2119 AT4G22780 ACR7 ACT domain repeat 7|T12H17.170|T12H17_170 ACT domain repeat 7 protein-coding common peak13588 4 12091001 12093149 + exon (AT4G23070.1, exon 1 of 4) 142 AT4G23070 RBL7 ATRBL7|F7H19.260|F7H19_260|RHOMBOID-like protein 7 RHOMBOID-like protein 7 protein-coding common peak13603 4 12191841 12194296 + intron (AT4G23330.1, intron 3 of 7) 953 AT4G23330 AT4G23330 F16G20.30 hypothetical protein protein-coding common peak13612 4 12251809 12252215 + TTS (AT4G23470.3) 2263 AT4G23490 AT4G23490 F16G20.2 fringe-like protein (DUF604) protein-coding common peak13614 4 12264416 12266461 + intron (AT4G23500.1, intron 1 of 5) 976 AT4G23500 AT4G23500 F16G20.200|F16G20_200 Pectin lyase-like superfamily protein protein-coding common peak13622 4 12311134 12311440 + exon (AT4G23600.2, exon 1 of 6) 402 AT4G23600 CORI3 CORONATINE INDUCED 1|F9D16.70|F9D16_70|JASMONIC ACID RESPONSIVE 2|JR2 Tyrosine transaminase family protein protein-coding common peak13627 4 12341979 12343156 + exon (AT4G23700.2, exon 3 of 3) -2600 AT4G23690 DIR6 Arabidopsis thaliana dirigent protein 6|AtDIR6|F9D16.160|F9D16_160|dirigent protein 6 Disease resistance-responsive (dirigent-like protein) family protein protein-coding common peak13663 4 12528772 12529642 + TTS (AT4G24140.1) 1532 AT4G24130 AT4G24130 T19F6.120|T19F6_120 DUF538 family protein (Protein of unknown function, DUF538) protein-coding common peak13670 4 12560749 12561113 + promoter-TSS (AT4G24200.1) 13 AT4G24200 AT4G24200 T22A6.30|T22A6_30 Transcription elongation factor (TFIIS) family protein protein-coding common peak13676 4 12613814 12614242 + TTS (AT4G24380.4) 1575 AT4G24380 AT4G24380 T22A6.210|T22A6_210 dihydrofolate reductase protein-coding VNsp peak13679 4 12626225 12627271 + promoter-TSS (AT4G24420.3) -44 AT4G24420 AT4G24420 T22A6.250|T22A6_250 RNA-binding (RRM/RBD/RNP motifs) family protein protein-coding common peak13694 4 12712451 12712774 + exon (AT4G24620.1, exon 1 of 14) 213 AT4G24620 PGI1 F22K18.180|F22K18_180|PGI|PHOSPHO-GLC ISOMERASE|PHOSPHOGLUCOSE ISOMERASE PRECURSOR|phosphoglucose isomerase 1 phosphoglucose isomerase 1 protein-coding VNsp peak13699 4 12740768 12741446 + promoter-TSS (AT4G24690.1) 75 AT4G24690 NBR1 Arabidopsis thaliana next to BRCA1 gene 1|AtNBR1|F22K18.110|F22K18_110|next to BRCA1 gene 1 ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein protein-coding common peak13720 4 12861208 12862412 + exon (AT4G25020.1, exon 1 of 1) 165 AT4G25020 AT4G25020 F13M23.160|F13M23_160 D111/G-patch domain-containing protein protein-coding common peak13734 4 12921447 12922665 + TTS (AT4G25225.2) 1281 AT4G25225 AT4G25225 - transmembrane protein protein-coding common peak13751 4 13005741 13006529 + promoter-TSS (AT4G25434.7) 171 AT4G25435 AT4G25435 67154.TRNA-LYS-1|68201.TRNA-LYS-1|AT4G25436 tRNA tRNA common peak13806 4 13300134 13301293 + TTS (AT4G26260.1) 2910 AT4G26260 MIOX4 MYO-INOSITOL OXYGENASE 4|T25K17.70|T25K17_70|myo-inositol oxygenase 4 myo-inositol oxygenase 4 protein-coding common peak13808 4 13312491 13313362 + promoter-TSS (AT4G26300.3) -141 AT4G26300 emb1027 T25K17.110|T25K17_110|embryo defective 1027 Arginyl-tRNA synthetase, class Ic protein-coding common peak13812 4 13336433 13336796 + promoter-TSS (AT4G26370.1) -204 AT4G26375 AT4G26375 67159.TRNA-ILE-1|67160.TRNA-ILE-1 tRNA tRNA common peak13819 4 13370792 13372962 + TTS (AT4G26480.1) 926 AT4G26470 AT4G26470 M3E9.100|M3E9_100 Calcium-binding EF-hand family protein protein-coding common peak13825 4 13435533 13436227 + promoter-TSS (AT4G26630.2) -110 AT4G26630 AT4G26630 DEK-domain containing protein 3|DEK3|T15N24.80|T15N24_80 DEK domain-containing chromatin associated protein protein-coding common peak13851 4 13567736 13568717 + TTS (AT4G27020.1) 3269 AT4G27020 AT4G27020 F10M23.360|F10M23_360 inositol-1,4,5-trisphosphate 5-phosphatase protein-coding common peak13852 4 13571394 13572038 + promoter-TSS (AT4G27020.1) -97 AT4G27030 FADA F10M23.370|F10M23_370|FAD4|FATTY ACID DESATURASE 4|fatty acid desaturase A fatty acid desaturase A protein-coding common peak13873 4 13694369 13695200 + TTS (AT4G27370.4) 827 AT4G27360 AT4G27360 F27G19.12 Dynein light chain type 1 family protein protein-coding VNsp peak13884 4 13765933 13767317 + promoter-TSS (AT4G27580.1) -28 AT4G27580 AT4G27580 T29A15.70|T29A15_70 phosphatidylinositol transfer SFH5-like protein protein-coding VNsp peak13885 4 13769867 13770387 + promoter-TSS (AT4G27590.1) -166 AT4G27585 AT4G27585 AtSLP1|SLP1|stomatin-like protein 1 SPFH/Band 7/PHB domain-containing membrane-associated protein family protein-coding common peak13901 4 13849450 13850444 + promoter-TSS (AT4G27790.1) -2 AT4G27790 AT4G27790 T27E11.30|T27E11_30 Calcium-binding EF hand family protein protein-coding VNsp peak13905 4 13871574 13872049 + TTS (AT4G27852.3) 1435 AT4G27850 AT4G27850 T27E11.90|T27E11_90 Glycine-rich protein family protein-coding common peak13924 4 13975861 13976583 + promoter-TSS (AT4G28140.1) -303 AT4G28140 AT4G28140 F26K10.20|F26K10_20 Integrase-type DNA-binding superfamily protein protein-coding common peak13930 4 13997264 13998966 + promoter-TSS (AT4G28230.1) 489 AT4G28240 AT4G28240 F26K10.120|F26K10_120 Wound-responsive family protein protein-coding common peak13951 4 14110495 14111025 + promoter-TSS (AT4G28550.1) -39 AT4G28550 AT4G28550 F20O9.250|F20O9_250 Ypt/Rab-GAP domain of gyp1p superfamily protein protein-coding common peak13965 4 14162308 14163339 + exon (AT4G28700.1, exon 1 of 1) 1229 AT4G28700 AMT1;4 F16A16.190|F16A16_190|ammonium transporter 1;4 ammonium transporter 1;4 protein-coding common peak13967 4 14179720 14180299 + intron (AT4G28710.1, intron 30 of 38) 8011 AT4G28710 XIH ATXIH|F16A16.180|F16A16_180|MYOSIN XI H Myosin family protein with Dil domain-containing protein protein-coding common peak13981 4 14250837 14251452 + promoter-TSS (AT4G28880.1) 5 AT4G28880 ckl3 F25O24.3|casein kinase I-like 3 casein kinase I-like 3 protein-coding VNsp peak13990 4 14292651 14294011 + promoter-TSS (AT4G29000.1) -182 AT4G29000 AT4G29000 F19B15.30|F19B15_30 Tesmin/TSO1-like CXC domain-containing protein protein-coding common peak13991 4 14300519 14300983 + intron (AT4G29010.1, intron 7 of 17) 1536 AT4G29010 AIM1 ABNORMAL INFLORESCENCE MERISTEM|F19B15.40|F19B15_40 Enoyl-CoA hydratase/isomerase family protein-coding VNsp peak14030 4 14483777 14484353 + promoter-TSS (AT4G29460.1) -129 AT4G29460 PLA2-GAMMA F17A13.280|F17A13_280|phospholipase A2 gamma Phospholipase A2 family protein protein-coding VNsp peak14049 4 14569250 14570382 + promoter-TSS (AT4G29750.2) 88 AT4G29750 AT4G29750 T16L4.260|T16L4_260 CRS1 / YhbY (CRM) domain-containing protein protein-coding common peak14086 4 14750098 14750386 + TTS (AT4G30150.2) -2990 AT4G30160 VLN4 ATVLN4|F9N11.10|F9N11_10|villin 4 villin 4 protein-coding VNsp peak14101 4 14830089 14830944 + promoter-TSS (AT4G30290.1) -292 AT4G30290 XTH19 ATXTH19|F17I23.370|F17I23_370|XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19|xyloglucan endotransglucosylase/hydrolase 19 xyloglucan endotransglucosylase/hydrolase 19 protein-coding common peak14105 4 14848434 14850324 + exon (AT4G30350.1, exon 2 of 3) 1796 AT4G30350 AT4G30350 F17I23.310|F17I23_310|SMAX1-like 2|SMXL2 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein protein-coding common peak14133 4 14986295 14987058 + exon (AT4G30770.1, exon 1 of 1) 200 AT4G30770 AT4G30770 T10C21.120|T10C21_120 Putative membrane lipoprotein protein-coding VNsp peak14135 4 14997491 14999355 + promoter-TSS (AT4G08355.1) 226 AT4G30790 AT4G30790 ATG11|AUTOPHAGY-RELATED 11|T10C21.140|T10C21_140 autophagy-like protein protein-coding common peak14138 4 15011966 15012365 + exon (AT4G30825.1, exon 1 of 1) 2694 AT4G30825 AT4G30825 - Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding common peak14174 4 15215602 15216584 + TTS (AT4G31350.1) -1164 AT4G31351 AT4G31351 - hypothetical protein protein-coding common peak14183 4 15267469 15267925 + promoter-TSS (AT4G31490.1) -749 AT4G31490 AT4G31490 F3L17.60|F3L17_60 Coatomer, beta subunit protein-coding common peak14215 4 15463956 15465444 + promoter-TSS (AT4G31980.1) 58 AT4G31980 AT4G31980 F11C18.13 PPPDE thiol peptidase family protein protein-coding common peak14233 4 15553448 15556218 + exon (AT4G32200.2, exon 15 of 15) 3334 AT4G32210 SDH3-2 F10M6.150|F10M6_150|succinate dehydrogenase 3-2 succinate dehydrogenase 3-2 protein-coding common peak14235 4 15563696 15565438 + TTS (AT4G32230.1) 2404 AT4G32230 AT4G32230 F10M6.130|F10M6_130 hypothetical protein protein-coding common peak14258 4 15683862 15684176 + intron (AT4G32500.1, intron 9 of 11) 3002 AT4G32500 KT5 AKT5|F8B4.200|F8B4_200|K+ transporter 5 K+ transporter 5 protein-coding VNsp peak14266 4 15723242 15724010 + TTS (AT4G32590.4) 269 AT4G32600 AT4G32600 F4D11.200|F4D11_200 C3H4 type zinc finger protein protein-coding common peak14267 4 15726158 15726733 + TTS (AT4G32600.1) 1532 AT4G32605 AT4G32605 - Mitochondrial glycoprotein family protein protein-coding common peak14285 4 15829732 15831223 + TTS (AT4G32820.1) 2249 AT4G32810 CCD8 ATCCD8|MAX4|MORE AXILLARY BRANCHING 4|T16I18.20|T16I18_20|carotenoid cleavage dioxygenase 8 carotenoid cleavage dioxygenase 8 protein-coding common peak14299 4 15912242 15912431 + intron (AT4G32970.1, intron 6 of 11) 2020 AT4G32970 AT4G32970 F26P21.90|F26P21_90 BRISC/BRCA1-A complex protein protein-coding common peak14330 4 16110873 16112745 + promoter-TSS (AT4G33490.2) 795 AT4G33495 RPD1 ROOT PRIMORDIUM DEFECTIVE 1 Ubiquitin carboxyl-terminal hydrolase family protein protein-coding common peak14352 4 16252572 16253623 + promoter-TSS (AT4G33900.1) -386 AT4G33900 AT4G33900 - Galactose oxidase/kelch repeat superfamily protein protein-coding common peak14360 4 16281230 16282943 + promoter-TSS (AT4G33970.1) -38 AT4G33970 AT4G33970 F17I5.160|F17I5_160 Leucine-rich repeat (LRR) family protein protein-coding common peak14366 4 16303456 16304198 + promoter-TSS (ENSRNA049492433-T1) -297 AT4G34035 AT4G34035 67199.TRNA-ARG-1 tRNA tRNA common peak14393 4 16482248 16483337 + intron (AT4G34480.1, intron 3 of 5) 1242 AT4G34480 AT4G34480 T4L20.60|T4L20_60 O-Glycosyl hydrolases family 17 protein protein-coding common peak14396 4 16491038 16491410 + promoter-TSS (AT4G34510.1) -170 AT4G34500 AT4G34500 T4L20.80|T4L20_80 Protein kinase superfamily protein protein-coding common peak14406 4 16562171 16564304 + promoter-TSS (AT4G34710.1) -193 AT4G34710 ADC2 ARGININE DECARBOXYLASE|ATADC2|SPE2|T4L20.290|T4L20_290|arginine decarboxylase 2 arginine decarboxylase 2 protein-coding common peak14418 4 16621866 16623215 + intron (AT4G34890.1, intron 4 of 13) 2651 AT4G34890 XDH1 ATXDH1|F11I11.130|F11I11_130|XANTHINE DEHYDROGENASE 1|xanthine dehydrogenase 1 xanthine dehydrogenase 1 protein-coding VNsp peak14426 4 16667073 16668244 + promoter-TSS (AT4G35000.1) 63 AT4G35000 APX3 ASCORBATE PEROXIDASE 3|M4E13.60|M4E13_60|ascorbate peroxidase 3 ascorbate peroxidase 3 protein-coding common peak14462 4 16865096 16865786 + promoter-TSS (AT4G35520.6) -11 AT4G35520 MLH3 ATMLH3|F8D20.30|F8D20_30|MUTL protein homolog 3 MUTL protein homolog 3 protein-coding common peak14470 4 16899945 16900922 + promoter-TSS (AT4G35610.1) -165 AT4G35610 AT4G35610 F8D20.120|F8D20_120 zinc finger (C2H2 type) family protein protein-coding common peak14497 4 17044030 17045135 + promoter-TSS (AT4G36032.1) 17 AT4G36020 CSDP1 AtCSP1|CSP1|T19K4.150|T19K4_150|cold shock domain protein 1|cold shock protein 1 cold shock domain protein 1 protein-coding common peak14500 4 17058793 17060095 + TTS (AT4G36080.2) 183 AT4G36070 CPK18 T19K4.200|T19K4_200|calcium-dependent protein kinase 18 calcium-dependent protein kinase 18 protein-coding common peak14501 4 17077321 17079064 + promoter-TSS (AT4G36080.2) -153 AT4G36080 AT4G36080 - phosphotransferases/inositol or phosphatidylinositol kinase protein-coding common peak14525 4 17201312 17201950 + promoter-TSS (AT4G36410.1) -291 AT4G36410 UBC17 AP22.89|AP22_89|ubiquitin-conjugating enzyme 17 ubiquitin-conjugating enzyme 17 protein-coding common peak14554 4 17355314 17356006 + exon (AT4G36850.2, exon 1 of 10) 231 AT4G36850 AT4G36850 AP22.27|AP22_27 PQ-loop repeat family protein / transmembrane family protein protein-coding common peak14560 4 17393172 17394136 + promoter-TSS (AT4G36910.1) -175 AT4G36910 LEJ2 AP22.61|AP22_61|CBS domain containing protein 1|CBSX1|CDCP2|CYSTATHIONE [BETA]-SYNTHASE DOMAIN-CONTAINING PROTEIN 2|LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 Cystathionine beta-synthase (CBS) family protein protein-coding common peak14572 4 17445448 17446058 + promoter-TSS (AT4G37020.2) 76 AT4G37020 AT4G37020 - initiation factor 4A-like protein protein-coding common peak14582 4 17504131 17504749 + promoter-TSS (AT4G37180.1) 12 AT4G37180 AT4G37180 - Homeodomain-like superfamily protein protein-coding common peak14601 4 17593978 17595113 + exon (AT4G37420.1, exon 1 of 1) 1549 AT4G37420 AT4G37420 F6G17.70|F6G17_70 glycosyltransferase family protein (DUF23) protein-coding common peak14617 4 17682793 17683522 + exon (AT4G37640.1, exon 7 of 7) 3804 AT4G37630 CYCD5;1 F19F18.120|F19F18_120|cyclin d5;1 cyclin d5;1 protein-coding VNsp peak14632 4 17745791 17747078 + exon (AT4G37760.1, exon 6 of 6) 2696 AT4G37760 SQE3 T28I19.40|T28I19_40|squalene epoxidase 3 squalene epoxidase 3 protein-coding common peak14668 4 17927564 17928216 + TTS (AT4G38220.2) 668 AT4G38225 AT4G38225 - glycerol kinase protein-coding VNsp peak14696 4 18082735 18083626 + promoter-TSS (AT4G38730.1) -497 AT4G38730 AT4G38730 T9A14.10|T9A14_10 magnesium transporter, putative (DUF803) protein-coding common peak14716 4 18224829 18225531 + promoter-TSS (AT4G39110.1) 58 AT4G39110 AT4G39110 T22F8.10|T22F8_10 Malectin/receptor-like protein kinase family protein protein-coding VNsp peak14717 4 18233100 18233523 + TTS (AT4G39150.1) -1109 AT4G39140 AT4G39140 T22F8.40|T22F8_40 RING/U-box superfamily protein protein-coding common peak14753 4 18409252 18411509 + promoter-TSS (AT4G39672.1) 534 AT4G39670 AT4G39670 T19P19.60|T19P19_60 Glycolipid transfer protein (GLTP) family protein protein-coding common peak14756 4 18433643 18434238 + TTS (AT4G39730.1) 1281 AT4G39730 PLAT1 PLAT domain protein 1|T19P19.120|T19P19_120 Lipase/lipooxygenase, PLAT/LH2 family protein protein-coding common peak14764 4 18471743 18472637 + promoter-TSS (AT4G39800.1) -142 AT4G39800 MIPS1 ATIPS1|ATMIPS1|ATMIPS2|D-myo-Inositol 3-Phosphate Synthase 1|INOSITOL 3-PHOSPHATE SYNTHASE 1|MI-1-P SYNTHASE|MIPS2|MYO-INOSITOL-1-PHOSPHATE SYNTHASE|MYO-INOSITOL-1-PHOSPHATE SYNTHASE 1|MYO-INOSITOL-1-PHOSTPATE SYNTHASE 1|MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2|T19P19.190|T19P19_190|T5J17.3|myo-inositol-1-phosphate synthase 1|myo-inositol-1-phosphate synthase 2 myo-inositol-1-phosphate synthase 1 protein-coding common peak14786 4 18583792 18584613 + intron (AT4G40100.1, intron 3 of 3) 958 AT4G40100 PRSL1 PRS2-like protein 1|T5J17.2|T5J17_2 GRAM domain family protein protein-coding VNsp peak14791 5 34488 35177 + TTS (AT5G01090.1) 2052 AT5G01090 AT5G01090 F7J8.70|F7J8_70 Concanavalin A-like lectin family protein protein-coding VNsp peak14799 5 71153 71437 + promoter-TSS (AT5G01190.1) -997 AT5G01190 LAC10 F7J8.170|F7J8_170|laccase 10 laccase 10 protein-coding VNsp peak14831 5 254232 254629 + TTS (AT5G01670.2) 2210 AT5G01680 CHX26 ARABIDOPSIS THALIANA CATION/HYDROGEN EXCHANGER 26|ATCHX26|F7A7.200|F7A7_200|cation/H+ exchanger 26 cation/H+ exchanger 26 protein-coding VNsp peak15391 5 3224659 3225862 + promoter-TSS (AT5G10270.1) 464 AT5G01685 AT5G01685 - ncRNA ncRNA common peak14834 5 265373 266026 + promoter-TSS (AT5G00785.1) -66 AT5G01710 AT5G01710 F7A7.230|F7A7_230 methyltransferase protein-coding common peak14873 5 486357 486981 + promoter-TSS (AT5G02320.1) -196 AT5G02320 MYB3R-5 ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 3R5|ATMYB3R5|T1E22.80|T1E22_80|myb domain protein 3r-5 myb domain protein 3r-5 protein-coding common peak14913 5 709628 709895 + promoter-TSS (AT5G03030.2) -27 AT5G03030 AT5G03030 F15A17.60|F15A17_60 Chaperone DnaJ-domain superfamily protein protein-coding common peak16079 5 6923904 6924512 + exon (AT5G20480.2, exon 1 of 2) -1797 at5g03145 common peak16114 5 7121705 7122901 + promoter-TSS (AT5G20970.1) 385 at5g03265 common peak16264 5 7893104 7893464 + TTS (AT5G23430.1) 1938 AT5G03615 AT5G03615 - ncRNA ncRNA common peak14964 5 950933 951280 + TTS (AT5G03670.1) -2139 AT5G03668 AT5G03668 - ncRNA ncRNA common peak14973 5 994916 995462 + promoter-TSS (AT5G03770.1) 72 AT5G03770 KDTA AtKdtA|F17C15.190|F17C15_190|KDO transferase A KDO transferase A protein-coding common peak14991 5 1089203 1091078 + exon (AT5G04040.2, exon 1 of 3) 199 AT5G04040 SDP1 F8F6.250|F8F6_250|SUGAR-DEPENDENT1 Patatin-like phospholipase family protein protein-coding common peak14992 5 1092609 1092945 + promoter-TSS (AT5G04045.1) -902 AT5G04045 AT5G04045 - Putative membrane lipoprotein protein-coding common peak16475 5 8957464 8957893 + TTS (AT5G25755.1) -1676 AT5G04055 AT5G04055 - ncRNA ncRNA VNsp peak16476 5 8963289 8964114 + promoter-TSS (AT5G25756.1) 102 AT5G04065 AT5G04065 - ncRNA ncRNA common peak16477 5 8964709 8965412 + TTS (AT5G25757.1) -1257 AT5G04065 AT5G04065 - ncRNA ncRNA common peak14997 5 1121975 1123931 + TTS (AT5G04130.3) 3016 AT5G04120 AT5G04120 F21E1.40|F21E1_40 Phosphoglycerate mutase family protein protein-coding common peak15001 5 1148667 1149350 + exon (AT5G04180.1, exon 2 of 6) 276 AT5G04180 ACA3 ALPHA CARBONIC ANHYDRASE 3|ATACA3|F21E1.100|F21E1_100|alpha carbonic anhydrase 3 alpha carbonic anhydrase 3 protein-coding VNsp peak15024 5 1263267 1264267 + TTS (AT5G04460.6) -3253 AT5G04475 AT5G04475 - hypothetical protein protein-coding VNsp peak15026 5 1282604 1283822 + promoter-TSS (AT5G04500.1) -165 AT5G04500 AT5G04500 T32M21.100|T32M21_100 glycosyltransferase family protein 47 protein-coding common peak16646 5 9924292 9924791 + Intergenic -14184 AT5G04575 AT5G04575 - ncRNA ncRNA VNsp peak16647 5 9937203 9937959 + Intergenic -1144 AT5G04575 AT5G04575 - ncRNA ncRNA VNsp peak16650 5 9956418 9956892 + TTS (AT5G04585.1) 503 AT5G04585 AT5G04585 - ncRNA ncRNA VNsp peak16651 5 9958071 9958537 + exon (AT5G27930.3, exon 4 of 4) 2152 AT5G04585 AT5G04585 - ncRNA ncRNA common peak16669 5 10119554 10119790 + Intergenic -7325 AT5G04675 AT5G04675 - ncRNA ncRNA VNsp peak16692 5 10397049 10397543 + Intergenic 1997 AT5G04745 AT5G04745 - ncRNA ncRNA VNsp peak16693 5 10422908 10423728 + Intergenic -4277 AT5G04755 AT5G04755 - ncRNA ncRNA VNsp peak16695 5 10446883 10447505 + promoter-TSS (AT5G04765.1) 13 AT5G04765 AT5G04765 - ncRNA ncRNA VNsp peak16708 5 10613312 10615236 + TTS (AT5G04785.1) 349 AT5G04785 AT5G04785 - ncRNA ncRNA common peak16709 5 10631523 10632834 + Intergenic -3177 AT5G04795 AT5G04795 - ncRNA ncRNA common peak16720 5 10791368 10791829 + Intergenic -3304 AT5G04815 AT5G04815 - ncRNA ncRNA VNsp peak16721 5 10804189 10804878 + promoter-TSS (AT5G04825.1) -536 AT5G04825 AT5G04825 - ncRNA ncRNA VNsp peak16724 5 10828188 10828572 + Intergenic -2848 AT5G04855 AT5G04855 - ncRNA ncRNA common peak16725 5 10829174 10829688 + Intergenic -1797 AT5G04855 AT5G04855 - ncRNA ncRNA VNsp peak16731 5 10862082 10863029 + exon (AT5G28840.1, exon 7 of 7) 1781 AT5G04865 AT5G04865 - ncRNA ncRNA common peak15053 5 1449366 1450051 + exon (AT5G04930.1, exon 7 of 7) -1375 AT5G04933 AT5G04933 - Pol-like polyprotein/retrotransposon protein-coding common peak16765 5 11451407 11451886 + Intergenic 33268 AT5G04945 AT5G04945 - ncRNA ncRNA VNsp peak16766 5 11493911 11494588 + Intergenic -9335 AT5G04945 AT5G04945 - ncRNA ncRNA VNsp peak16780 5 11723579 11724685 + Intergenic 33090 at5g04975 common peak16781 5 11726093 11736271 + Intergenic 26040 at5g04975 common peak15062 5 1489185 1490122 + Intergenic -1685 AT5G05040 AT5G05040 MUG13.10|MUG13_10 Cystatin/monellin superfamily protein protein-coding VNsp peak16801 5 12391676 12393179 + Intergenic -47281 AT5G05045 AT5G05045 - ncRNA ncRNA VNsp peak16803 5 12420487 12421328 + Intergenic -18801 AT5G05045 AT5G05045 - ncRNA ncRNA VNsp peak16808 5 12512303 12513630 + Intergenic 32542 AT5G05065 AT5G05065 - ncRNA ncRNA VNsp peak15070 5 1514601 1515951 + TTS (AT5G05130.1) 3194 AT5G05130 AT5G05130 MUG13.1|MUG13_1 DNA/RNA helicase protein protein-coding common peak15073 5 1533455 1534374 + exon (AT5G05170.1, exon 6 of 15) 1644 AT5G05170 CEV1 ATCESA3|ATH-B|CELLULOSE SYNTHASE 3|CESA3|CONSTITUTIVE EXPRESSION OF VSP 1|ECTOPIC LIGNIFICATION 1|ELI1|ISOXABEN RESISTANT 1|ISOXABEN RESISTANT 1|IXR1|K2A11.4|K2A11_4|MRE1|multiple response expansion 1 Cellulose synthase family protein protein-coding common peak16873 5 13683475 13685116 + exon (AT5G05195.1, exon 1 of 1) 286 AT5G05195 AT5G05195 - ncRNA ncRNA VNsp peak16877 5 13741105 13742628 + TTS (AT5G35560.2) 720 AT5G05235 AT5G05235 - ncRNA ncRNA common peak16937 5 14292081 14292306 + Intergenic 2626 AT5G05335 AT5G05335 - ncRNA ncRNA common peak15091 5 1601898 1602445 + promoter-TSS (AT5G05410.2) -34 AT5G05410 DREB2A DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2|DRE-binding protein 2A|DREB2|K18I23.22|K18I23_22 DRE-binding protein 2A protein-coding common peak15097 5 1632256 1633499 + promoter-TSS (AT5G05520.1) 78 AT5G05520 AT5G05520 MOP10.6|MOP10_6 Outer membrane OMP85 family protein protein-coding common peak15098 5 1640423 1641633 + promoter-TSS (AT5G05560.3) -68 AT5G05550 AT5G05550 MOP10.9|MOP10_9 sequence-specific DNA binding transcription factor protein-coding common peak15100 5 1664233 1665133 + TTS (AT5G05570.1) 621 AT5G05580 FAD8 AtFAD8|MOP10.12|MOP10_12|OMEGA-3 FATTY ACID DESATURASE|fatty acid desaturase 8 fatty acid desaturase 8 protein-coding common peak17038 5 15111774 15113432 + TTS (AT5G05585.1) 465 AT5G05585 AT5G05585 - ncRNA ncRNA common peak17087 5 15407107 15407852 + TTS (AT5G05755.1) 1071 AT5G05755 AT5G05755 - ncRNA ncRNA VNsp peak17116 5 15601313 15601560 + Intergenic -2435 AT5G05875 AT5G05875 - ncRNA ncRNA common peak15124 5 1804342 1805295 + promoter-TSS (AT5G05980.2) 121 AT5G05987 PRA1.A2 prenylated RAB acceptor 1.A2 prenylated RAB acceptor 1.A2 protein-coding common peak15126 5 1809938 1810613 + TTS (AT5G06000.1) 410 AT5G06010 AT5G06010 K18J17.21|K18J17_21 hypothetical protein protein-coding common peak15128 5 1815719 1816867 + TTS (AT5G06040.1) 1165 AT5G06040 AT5G06040 K18J17.24|K18J17_24 self-incompatibility protein-like protein protein-coding common peak15132 5 1843649 1844525 + promoter-TSS (AT5G06110.2) 9 AT5G06120 AT5G06120 K16F4.8|K16F4_8 ARM repeat superfamily protein protein-coding common peak17373 5 17084686 17085562 + promoter-TSS (AT5G06365.1) -437 AT5G06365 AT5G06365 - ncRNA ncRNA common peak17401 5 17220581 17220900 + promoter-TSS (AT5G42940.1) -17 AT5G06425 AT5G06425 - ncRNA ncRNA common peak15164 5 2005433 2006265 + exon (AT5G06560.1, exon 1 of 4) 498 AT5G06560 AT5G06560 F15M7.9|F15M7_9 myosin-binding protein (Protein of unknown function, DUF593) protein-coding common peak15167 5 2018213 2019391 + TTS (AT5G06590.2) 2212 AT5G06590 AT5G06590 F15M7.12|F15M7_12 hypothetical protein protein-coding VNsp peak17572 5 18132685 18133483 + TTS (AT5G06655.1) 1201 AT5G06655 AT5G06655 - ncRNA ncRNA common peak15181 5 2107657 2108544 + promoter-TSS (AT5G06810.1) -393 AT5G06810 AT5G06810 MPH15.18|MPH15_18 transcription termination factor family protein protein-coding common peak17699 5 18805527 18805828 + TTS (AT5G46360.2) 1060 AT5G06815 U6.29 - ncRNA ncRNA common peak15184 5 2126890 2127173 + TTS (AT5G06839.2) 3478 AT5G06850 FTIP1 FT-interacting protein 1|MOJ9.2|MOJ9_2 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein protein-coding common peak15194 5 2183677 2184829 + exon (AT5G07030.1, exon 2 of 3) -1715 AT5G07020 AT5G07020 MOJ9.19|MOJ9_19 proline-rich family protein protein-coding common peak15214 5 2275832 2276376 + promoter-TSS (AT5G07250.1) -65 AT5G07250 RBL3 ATRBL3|RHOMBOID-like protein 3|T28J14.190|T28J14_190 RHOMBOID-like protein 3 protein-coding common peak15230 5 2345734 2346381 + TTS (AT5G07400.4) 299 AT5G07410 AT5G07410 T2I1.120|T2I1_120 Pectin lyase-like superfamily protein protein-coding common peak15239 5 2390765 2391938 + promoter-TSS (AT5G07570.2) 88 AT5G07560 GRP20 ATGRP20|T2I1.270|T2I1_270|glycine-rich protein 20 glycine-rich protein 20 protein-coding common peak15240 5 2392185 2392691 + promoter-TSS (AT5G07560.1) 716 AT5G07570 AT5G07570 T2I1.280|T2I1_280 glycine/proline-rich protein protein-coding common peak15243 5 2402659 2404563 + TTS (AT5G07600.1) 266 AT5G07590 AT5G07590 MBK20.2|MBK20_2 Transducin/WD40 repeat-like superfamily protein protein-coding common peak15244 5 2410913 2411835 + promoter-TSS (AT5G07630.2) -60 AT5G07630 AT5G07630 MBK20.7|MBK20_7 lipid transporter protein-coding common peak15246 5 2421924 2423434 + promoter-TSS (AT5G07660.1) -104 AT5G07660 SMC6A MBK20.10|MBK20_10|structural maintenance of chromosomes 6A structural maintenance of chromosomes 6A protein-coding common peak15252 5 2457653 2458949 + TTS (AT5G07740.2) 201 AT5G07730 AT5G07730 MBK20.19|MBK20_19 transmembrane protein protein-coding common peak15277 5 2602409 2603143 + exon (AT5G08120.1, exon 1 of 5) 159 AT5G08120 MPB2C ATMBP2C|MBP2C|MICROTUBULE BINDING PROTEIN 2C|movement protein binding protein 2C movement protein binding protein 2C protein-coding common peak15286 5 2650708 2651777 + exon (AT5G08240.1, exon 2 of 2) -1117 AT5G08230 AT5G08230 F8L15.8|HUA2 LIKE 1|HULK1 tudor/PWWP/MBT domain protein protein-coding common peak15314 5 2797221 2798067 + TTS (AT5G08630.1) 3256 AT5G08620 STRS2 ATRH25|MAH20.18|MAH20_18|RNA HELICASE 25|STRESS RESPONSE SUPPRESSOR 2 DEA(D/H)-box RNA helicase family protein protein-coding common peak15322 5 2847766 2848463 + promoter-TSS (AT5G08730.1) -699 AT5G08730 ARI16 ARABIDOPSIS ARIADNE 16|ARIADNE 16|ATARI16 IBR domain-containing protein protein-coding VNsp peak18615 5 23427535 23428286 + promoter-TSS (AT5G08785.1) -432 AT5G08785 AT5G08785 - ncRNA ncRNA common peak18666 5 23693757 23694984 + promoter-TSS (AT5G08870.1) 96 AT5G08870 AT5G08870 - ncRNA ncRNA common peak18899 5 24899730 24900972 + TTS (AT5G61980.1) -1011 AT5G09030 AT5G09030 - ncRNA ncRNA VNsp peak18997 5 25440198 25440814 + TTS (AT5G63540.1) 3589 AT5G09170 AT5G09170 - ncRNA ncRNA common peak19138 5 26227884 26229153 + promoter-TSS (AT5G09405.1) 81 AT5G09405 AT5G09405 - ncRNA ncRNA common peak15339 5 2940315 2941811 + promoter-TSS (AT5G09450.1) 387 AT5G09445 AT5G09445 - hypothetical protein protein-coding common peak15363 5 3078782 3079870 + promoter-TSS (AT5G09876.1) -561 AT5G09876 AT5G09876 - hypothetical protein protein-coding common peak15371 5 3117987 3118872 + promoter-TSS (AT5G09976.1) 52 AT5G09975 AT5G09975 67607.TRNA-LEU-1 tRNA tRNA common peak15375 5 3154303 3156485 + exon (AT5G10090.1, exon 1 of 4) 855 AT5G10090 TPR13 T31P16.80|T31P16_80|tetratricopeptide repeat 13 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding VNsp peak15388 5 3219671 3220648 + promoter-TSS (AT5G10250.1) 482 AT5G10260 RABH1e AtRABH1e|F18D22.30|F18D22_30|RAB GTPase homolog H1E RAB GTPase homolog H1E protein-coding common peak15389 5 3221390 3222351 + TTS (AT5G10260.1) 2193 AT5G10260 RABH1e AtRABH1e|F18D22.30|F18D22_30|RAB GTPase homolog H1E RAB GTPase homolog H1E protein-coding common peak15395 5 3253120 3253301 + promoter-TSS (AT5G10340.1) 88 AT5G10340 AT5G10340 F12B17.310|F12B17_310 F-box family protein protein-coding common peak15407 5 3343139 3343922 + promoter-TSS (AT5G10572.1) -63 AT5G10572 SNOR77 - ncRNA ncRNA common peak15416 5 3392574 3393858 + promoter-TSS (AT5G10730.1) -25 AT5G10730 AT5G10730 MAJ23.90|MAJ23_90 NAD(P)-binding Rossmann-fold superfamily protein protein-coding VNsp peak15450 5 3566987 3567544 + promoter-TSS (AT5G11200.2) 90 AT5G11200 UAP56b F2I11.90|F2I11_90|homolog of human UAP56 b DEAD/DEAH box RNA helicase family protein protein-coding common peak15471 5 3676228 3676994 + promoter-TSS (AT5G11500.2) 46 AT5G11500 AT5G11500 F15N18.90|F15N18_90 coiled-coil protein protein-coding common peak15486 5 3739227 3740804 + promoter-TSS (AT5G11630.1) 131 AT5G11620 AT5G11620 T22P22.10|T22P22_10 SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-like protein protein-coding common peak15495 5 3792453 3793502 + promoter-TSS (AT5G11770.1) 49 AT5G11770 AT5G11770 T22P22.160|T22P22_160 NADH-ubiquinone oxidoreductase 20 kDa subunit protein-coding common peak15521 5 3911090 3913177 + exon (AT5G12100.1, exon 1 of 1) 799 AT5G12100 AT5G12100 MXC9.6|MXC9_6 pentatricopeptide (PPR) repeat-containing protein protein-coding common peak15528 5 3944750 3945020 + promoter-TSS (AT5G12200.1) -19 AT5G12200 PYD2 MXC9.16|MXC9_16|pyrimidine 2 pyrimidine 2 protein-coding common peak15538 5 4007944 4008931 + promoter-TSS (AT5G12380.1) 338 AT5G12370 SEC10 exocyst complex component sec10 exocyst complex component sec10 protein-coding common peak15553 5 4100795 4102072 + promoter-TSS (AT5G12970.1) -682 AT5G12970 AT5G12970 T24H18.140|T24H18_140 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein protein-coding VNsp peak15560 5 4147485 4148274 + TTS (AT5G13060.1) 283 AT5G13070 AT5G13070 T19L5.30|T19L5_30 MSF1-like family protein protein-coding common peak15562 5 4155470 4157026 + promoter-TSS (AT5G13100.1) -253 AT5G13100 AT5G13100 T19L5.60|T19L5_60 Gap junction beta-4 protein protein-coding common peak15569 5 4196473 4197213 + intron (AT5G13180.1, intron 1 of 2) 587 AT5G13180 NAC083 ANAC083|NAC domain containing protein 83|T19L5.140|T19L5_140|VND-interacting 2|VNI2 NAC domain containing protein 83 protein-coding common peak15578 5 4233046 4234934 + promoter-TSS (AT5G13250.1) -166 AT5G13250 AT5G13250 T31B5.70|T31B5_70 RING finger protein protein-coding common peak15597 5 4354006 4355230 + TTS (AT5G13530.2) 5074 AT5G13550 SULTR4;1 sulfate transporter 4.1 sulfate transporter 4.1 protein-coding common peak15626 5 4514266 4517351 + exon (AT5G13990.1, exon 1 of 1) 1084 AT5G13990 EXO70C2 ATEXO70C2|MAC12.17|MAC12_17|exocyst subunit exo70 family protein C2 exocyst subunit exo70 family protein C2 protein-coding VNsp peak15678 5 4775756 4776019 + promoter-TSS (AT5G14770.1) -54 AT5G14770 AT5G14770 T9L3.70|T9L3_70 PPR repeat protein protein-coding common peak15683 5 4795887 4797211 + Intergenic -2396 AT5G14820 AT5G14820 T9L3.120|T9L3_120 Pentatricopeptide repeat (PPR) superfamily protein protein-coding common peak15700 5 4896385 4896947 + exon (AT5G15110.1, exon 2 of 4) 916 AT5G15110 AT5G15110 F2G14.230|F2G14_230 Pectate lyase family protein protein-coding common peak15704 5 4908479 4911262 + intron (AT5G15140.1, intron 4 of 5) 1219 AT5G15140 AT5G15140 F8M21.30|F8M21_30 Galactose mutarotase-like superfamily protein protein-coding common peak15724 5 5021397 5021684 + promoter-TSS (AT5G15460.2) -614 AT5G15460 MUB2 T20K14.70|T20K14_70|membrane-anchored ubiquitin-fold protein 2 membrane-anchored ubiquitin-fold protein 2 protein-coding VNsp peak15732 5 5065896 5067055 + exon (AT5G15570.1, exon 1 of 2) 271 AT5G15570 AT5G15570 T20K14.180|T20K14_180 Bromodomain transcription factor protein-coding common peak15736 5 5110879 5111456 + promoter-TSS (AT5G15685.1) -62 AT5G15680 AT5G15680 F14F8.60|F14F8_60 ARM repeat superfamily protein protein-coding common peak15737 5 5114599 5115533 + promoter-TSS (AT5G15690.1) -589 AT5G15690 AT5G15690 F14F8.70|F14F8_70 zinc ion binding protein protein-coding VNsp peak15744 5 5160915 5162354 + promoter-TSS (AT5G15820.1) -90 AT5G15820 AT5G15820 F14F8.200|F14F8_200 RING/U-box superfamily protein protein-coding common peak15760 5 5259588 5260708 + promoter-TSS (AT5G16100.2) -224 AT5G16100 AT5G16100 T21H19.20|T21H19_20 RWP-RK domain protein protein-coding common peak15782 5 5380635 5382192 + TTS (AT5G16470.1) 1526 AT5G16480 PFA-DSP5 AtPFA-DSP5|MQK4.21|MQK4_21|plant and fungi atypical dual-specificity phosphatase 5 Phosphotyrosine protein phosphatases superfamily protein protein-coding common peak15785 5 5391796 5393011 + promoter-TSS (AT5G16510.2) -173 AT5G16510 RGP5 MQK4.26|MQK4_26|reversibly glycosylated polypeptide 5|reversibly glycosylated protein 5 Alpha-1,4-glucan-protein synthase family protein protein-coding common peak15787 5 5404498 5405849 + promoter-TSS (AT5G16550.1) -173 AT5G16550 AT5G16550 MQK4.30|MQK4_30 voltage-dependent L-type calcium channel subunit protein-coding common peak15813 5 5551259 5551997 + promoter-TSS (AT5G16890.1) 1 AT5G16890 AT5G16890 F2K13.40|F2K13_40 Exostosin family protein protein-coding common peak15823 5 5609326 5609966 + promoter-TSS (AT5G17050.1) -57 AT5G17050 UGT78D2 F2K13.200|F2K13_200|UDP-glucosyl transferase 78D2 UDP-glucosyl transferase 78D2 protein-coding common peak15830 5 5648767 5648939 + promoter-TSS (AT5G17170.2) -204 AT5G17170 ENH1 MKP11.2|MKP11_2|enhancer of sos3-1 rubredoxin family protein protein-coding common peak15840 5 5689463 5690094 + TTS (AT5G17300.1) 169 AT5G17290 APG5 ATATG5|ATG5|AUTOPHAGY 5|MKP11.20|MKP11_20 autophagy protein Apg5 family protein-coding common peak15856 5 5758549 5760372 + promoter-TSS (AT5G17460.4) -11 AT5G17460 AT5G17460 - glutamyl-tRNA (Gln) amidotransferase subunit C protein-coding common peak15858 5 5771283 5773075 + TTS (AT5G17520.2) 216 AT5G17510 AT5G17510 K3M16.80|K3M16_80 mediator of RNA polymerase II transcription subunit-like protein protein-coding common peak15866 5 5808401 5809855 + promoter-TSS (AT5G17630.1) -206 AT5G17630 AT5G17630 K10A8.110|K10A8_110 Nucleotide/sugar transporter family protein protein-coding common peak15876 5 5859703 5860163 + TTS (AT5G17760.2) 108 AT5G17750 AT5G17750 MVA3.11|MVA3_11 P-loop containing nucleoside triphosphate hydrolases superfamily protein protein-coding common peak15903 5 6000086 6001159 + promoter-TSS (AT5G18150.1) -68 AT5G18150 AT5G18150 MRG7.11|MRG7_11 Methyltransferase-related protein protein-coding common peak15906 5 6014568 6015782 + promoter-TSS (AT5G18190.2) 140 AT5G18200 AT5G18200 MRG7.16|MRG7_16 putative galactose-1-phosphate uridyltransferase protein-coding common peak15908 5 6027025 6027555 + promoter-TSS (AT5G18245.2) 9 AT5G18230 AT5G18230 MRG7.19|MRG7_19 transcription regulator NOT2/NOT3/NOT5 family protein protein-coding common peak15940 5 6201504 6203110 + promoter-TSS (AT5G18620.1) -139 AT5G18620 CHR17 T1A4.2|chromatin remodeling factor17 chromatin remodeling factor17 protein-coding common peak15949 5 6254394 6255100 + promoter-TSS (AT5G18748.1) 22 AT5G18748 AT5G18748 - hypothetical protein protein-coding common peak15955 5 6286623 6287080 + TTS (AT5G18840.1) 119 AT5G18850 AT5G18850 F17K4.100|F17K4_100 Low-density receptor-like protein protein-coding common peak15966 5 6350867 6351621 + Intergenic -2977 AT5G19010 MPK16 T16G12.50|T16G12_50|mitogen-activated protein kinase 16 mitogen-activated protein kinase 16 protein-coding VNsp peak15967 5 6352017 6353105 + TTS (AT5G19020.1) 2395 AT5G19020 MEF18 T16G12.60|T16G12_60|mitochondrial editing factor 18|mitochondrial editing factor 18 mitochondrial editing factor 18 protein-coding common peak15990 5 6478018 6478571 + Intergenic 2435 AT5G19260 FAF3 F7K24.10|F7K24_10|FANTASTIC FOUR 3 FANTASTIC four-like protein (DUF3049) protein-coding common peak15995 5 6498571 6499284 + TTS (AT5G19300.1) 184 AT5G19310 CHR23 AtCHR23|F7K24.60|F7K24_60|chromatin remodeling 23 homeotic protein regulator protein-coding common peak15998 5 6520731 6521239 + TTS (AT5G19360.1) 2147 AT5G19350 AT5G19350 F7K24.100|F7K24_100 RNA-binding (RRM/RBD/RNP motifs) family protein protein-coding common peak15999 5 6523109 6524170 + TTS (AT5G19370.1) 315 AT5G19360 CPK34 AtCPK34|F7K24.110|F7K24_110|calcium-dependent protein kinase 34 calcium-dependent protein kinase 34 protein-coding VNsp peak16014 5 6606463 6609830 + TTS (AT5G19570.1) 1582 AT5G19570 AT5G19570 T20D1.90|T20D1_90 transmembrane protein protein-coding common peak16016 5 6621948 6623207 + promoter-TSS (AT5G19610.1) -473 AT5G19610 GNL2 GNOM-like 2|T29J13.30|T29J13_30 GNOM-like 2 protein-coding common peak16029 5 6689616 6689976 + promoter-TSS (AT5G19800.1) 244 AT5G19790 RAP2.11 T29J13.210|T29J13_210|related to AP2 11 related to AP2 11 protein-coding common peak16042 5 6751175 6751524 + promoter-TSS (AT5G19990.2) -197 AT5G19980 GONST4 F28I16.130|F28I16_130|golgi nucleotide sugar transporter 4 golgi nucleotide sugar transporter 4 protein-coding common peak16049 5 6770780 6771482 + promoter-TSS (AT5G20040.1) 39 AT5G20040 IPT9 ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 9|ATIPT9|F28I16.190|F28I16_190|isopentenyltransferase 9 isopentenyltransferase 9 protein-coding common peak16058 5 6810434 6811575 + promoter-TSS (AT5G20180.1) 40 AT5G20180 AT5G20180 F5O24.70|F5O24_70 Ribosomal protein L36 protein-coding common peak16070 5 6881355 6881602 + TTS (AT5G20360.7) 3152 AT5G20360 Phox3 F5O24.250|F5O24_250 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein protein-coding common peak16073 5 6892795 6894425 + exon (AT5G20390.1, exon 2 of 2) 587 AT5G20390 AT5G20390 F5O24.280|F5O24_280 Glycosyl hydrolase superfamily protein protein-coding common peak16076 5 6913120 6914206 + promoter-TSS (AT5G20450.4) -340 AT5G20450 AT5G20450 F7C8.40|F7C8_40 myosin protein-coding common peak16077 5 6915441 6916299 + TTS (AT5G20470.1) 1567 AT5G20460 AT5G20460 F7C8.50|F7C8_50 hypothetical protein protein-coding VNsp peak16082 5 6945787 6946593 + exon (AT5G20520.1, exon 1 of 8) 324 AT5G20520 WAV2 F7C8.110|F7C8_110|WAVY GROWTH 2 alpha/beta-Hydrolases superfamily protein protein-coding common peak16097 5 7025209 7027370 + exon (AT5G20740.2, exon 1 of 1) 244 AT5G20740 AT5G20740 T1M15.140|T1M15_140 Plant invertase/pectin methylesterase inhibitor superfamily protein protein-coding common peak16111 5 7097570 7098342 + promoter-TSS (AT5G20920.3) 88 AT5G20930 TSL F22D1.100|F22D1_100|PROTEIN KINASE TSL|TOUSLED Protein kinase superfamily protein protein-coding common peak16121 5 7156964 7158213 + TTS (AT5G21080.1) 1525 AT5G21070 AT5G21070 T10F18.100|T10F18_100 Fe(3+) dicitrate transport system permease protein-coding VNsp peak16129 5 7202785 7204363 + intron (AT5G21160.3, intron 1 of 15) 520 AT5G21160 LARP1a AtLARP1a|La related protein 1a|T10F18.190|T10F18_190 LA RNA-binding protein protein-coding common peak16142 5 7272912 7273697 + exon (AT5G21990.1, exon 1 of 11) 233 AT5G21990 TPR7 AtTPR7|OEP61|outer envelope protein 61|tetratricopeptide repeat 7 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding common peak16143 5 7274850 7276639 + exon (AT5G21990.1, exon 9 of 11) -1438 AT5G22000 RHF2A RING-H2 FINGER PROTEIN RHF2A|RING-H2 group F2A RING-H2 group F2A protein-coding VNsp peak16182 5 7471264 7472596 + TTS (AT5G22505.1) 1487 AT5G22500 FAR1 MQJ16.4|MQJ16_4|fatty acid reductase 1 fatty acid reductase 1 protein-coding common peak16183 5 7477589 7478536 + promoter-TSS (AT5G22520.1) 130 AT5G22510 INV-E A/N-InvE|Arabidopsis alkaline/neutral invertase|Arabidopsis alkaline/neutral invertase E|At-A/N-InvE|MQJ16.5|MQJ16_5|alkaline/neutral invertase|alkaline/neutral invertase E alkaline/neutral invertase protein-coding common peak16188 5 7509343 7510360 + promoter-TSS (AT5G22600.2) 8 AT5G22600 AT5G22600 MDJ22.2|MDJ22_2 FBD / Leucine Rich Repeat domains containing protein protein-coding common peak16195 5 7533518 7534327 + promoter-TSS (AT5G22650.2) -24 AT5G22650 HD2B ARABIDOPSIS HISTONE DEACETYLASE 2|ATHD2|ATHD2B|HD2|HDA4|HDT02|HDT2|HISTONE DEACETYLASE|HISTONE DEACETYLASE 2|MDJ22.7|MDJ22_7|histone deacetylase 2B histone deacetylase 2B protein-coding common peak16197 5 7549335 7549513 + promoter-TSS (AT5G22700.2) -31 AT5G22700 AT5G22700 MDJ22.12|MDJ22_12 LOW protein: F-box/FBD/LRR-like protein protein-coding common peak16199 5 7554379 7554607 + promoter-TSS (AT5G22730.1) -956 AT5G22730 AT5G22730 MDJ22.15|MDJ22_15 F-box/RNI-like/FBD-like domains-containing protein protein-coding VNsp peak16202 5 7570118 7572096 + promoter-TSS (AT5G22760.3) 2 AT5G22750 RAD5 MDJ22.17|MDJ22_17|RAD5A DNA/RNA helicase protein protein-coding common peak16207 5 7607123 7608852 + promoter-TSS (AT5G22794.1) -255 AT5G22794 AT5G22794 - hypothetical protein protein-coding common peak16240 5 7780752 7781449 + promoter-TSS (AT5G23130.1) -72 AT5G23130 AT5G23130 MYJ24.12|MYJ24_12 Peptidoglycan-binding LysM domain-containing protein protein-coding common peak16242 5 7794677 7796741 + TTS (AT5G23155.1) 637 AT5G23160 AT5G23160 MKD15.2|MKD15_2 transmembrane protein protein-coding common peak16255 5 7853829 7854373 + promoter-TSS (AT5G23330.1) 45 AT5G23330 AT5G23330 MKD15.19|MKD15_19 Nucleotidylyl transferase superfamily protein protein-coding common peak16256 5 7855398 7856487 + promoter-TSS (AT5G23340.1) -97 AT5G23340 AT5G23340 MKD15.20|MKD15_20 RNI-like superfamily protein protein-coding common peak16277 5 7959365 7961492 + promoter-TSS (AT5G23610.1) 18 AT5G23610 AT5G23610 MQM1.12|MQM1_12 DYAD protein protein-coding common peak16278 5 7967425 7968891 + promoter-TSS (AT5G23630.1) 39 AT5G23630 PDR2 MALE GAMETOGENESIS IMPAIRED ANTHERS|MIA|MQM1.11|MQM1_11|PI DEFICIENCY RESPONSE 2|phosphate deficiency response 2 phosphate deficiency response 2 protein-coding common peak16304 5 8116259 8117218 + promoter-TSS (AT5G24020.1) 73 AT5G24020 MIND ACCUMULATION AND REPLICATION OF CHLOROPLASTS 11|ARC11|ATMIND1|MZF18.10|MZF18_10 septum site-determining protein (MIND) protein-coding common peak16308 5 8132872 8133575 + promoter-TSS (AT5G24060.3) 78 AT5G24060 AT5G24060 MZF18.6|MZF18_6 Pentatricopeptide repeat (PPR) superfamily protein protein-coding common peak16315 5 8153516 8153792 + TTS (AT5G24105.1) 1056 AT5G24110 WRKY30 ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 30|ATWRKY30|MLE8.3|MLE8_3|WRKY DNA-binding protein 30 WRKY DNA-binding protein 30 protein-coding common peak16319 5 8181374 8181722 + promoter-TSS (AT5G24155.3) -441 AT5G24155 AT5G24155 - FAD/NAD(P)-binding oxidoreductase family protein protein-coding common peak16325 5 8220204 8221465 + promoter-TSS (AT5G24215.1) -537 AT5G24215 AT5G24215 - hypothetical protein protein-coding common peak16327 5 8232808 8235010 + promoter-TSS (AT5G24240.1) 241 AT5G24240 AT5G24240 MOP9.5|MOP9_5 phosphatidylinositol 4-kinase gamma-like protein protein-coding common peak16328 5 8238285 8239251 + promoter-TSS (AT5G24260.5) -474 AT5G24260 AT5G24260 MOP9.8|MOP9_8 prolyl oligopeptidase family protein protein-coding common peak16330 5 8248649 8250220 + promoter-TSS (AT5G24275.1) -745 AT5G24275 AT5G24275 - En/Spm-like transposon protein-coding common peak16331 5 8251010 8251992 + exon (AT5G24280.1, exon 38 of 38) -2812 AT5G24275 AT5G24275 - En/Spm-like transposon protein-coding common peak16339 5 8284342 8285372 + promoter-TSS (AT5G24318.4) -731 AT5G24318 AT5G24318 - O-Glycosyl hydrolases family 17 protein protein-coding common peak16344 5 8316055 8317191 + exon (AT5G24360.1, exon 1 of 6) 180 AT5G24360 IRE1-1 ARABIDOPSIS THALIANA INOSITOL REQUIRING 1-1|ATIRE1-1|AtIRE1b|IRE1B|K16H17.7|K16H17_7|inositol requiring 1-1 inositol requiring 1-1 protein-coding common peak16345 5 8320013 8320287 + promoter-TSS (AT5G24370.1) -819 AT5G24370 AT5G24370 K16H17.8|K16H17_8 Plant invertase/pectin methylesterase inhibitor superfamily protein protein-coding VNsp peak16356 5 8368452 8368989 + TTS (AT5G24510.1) 217 AT5G24500 AT5G24500 K18P6.2|K18P6_2 fantom protein protein-coding common peak16363 5 8402030 8402620 + exon (AT5G24560.1, exon 1 of 4) 120 AT5G24560 PP2-B12 AtPP2-B12|K18P6.9|K18P6_9|phloem protein 2-B12 phloem protein 2-B12 protein-coding common peak16368 5 8418714 8419395 + promoter-TSS (AT5G24590.2) 22 AT5G24590 TIP ANAC091|Arabidopsis NAC domain containing protein 91|TCV-interacting protein TCV-interacting protein protein-coding common peak16370 5 8436027 8437391 + promoter-TSS (AT5G24630.6) -315 AT5G24650 AT5G24650 HP30-2|K18P6.19|K18P6_19|hypothetical protein 30-2 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein protein-coding common peak16373 5 8445861 8446277 + Intergenic -1309 AT5G24670 EMB2820 AtTAD3|EMBRYO DEFECTIVE 2820|MXC17.5|MXC17_5|TAD3|tRNA adenosine deaminase 3 Cytidine/deoxycytidylate deaminase family protein protein-coding common peak16377 5 8467622 8469566 + promoter-TSS (AT5G24710.1) -421 AT5G24710 AT5G24710 MXC17.10|MXC17_10 Transducin/WD40 repeat-like superfamily protein protein-coding common peak16382 5 8516182 8516667 + TTS (AT5G24810.1) 1224 AT5G24800 BZIP9 ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 9|ATBZIP9|BASIC LEUCINE ZIPPER O2 HOMOLOG 2|BZIP PROTEIN BZO2H2|BZO2H2|F6A4.10|F6A4_10|basic leucine zipper 9 basic leucine zipper 9 protein-coding VNsp peak16397 5 8588368 8589912 + promoter-TSS (AT5G24930.1) -317 AT5G24930 COL4 ATCOL4|B-box domain protein 5|BBX5|CONSTANS-like 4|F6A4.140|F6A4_140 zinc finger CONSTANS-like protein protein-coding common peak16398 5 8590578 8590808 + TTS (AT5G24940.1) 1236 AT5G24930 COL4 ATCOL4|B-box domain protein 5|BBX5|CONSTANS-like 4|F6A4.140|F6A4_140 zinc finger CONSTANS-like protein protein-coding common peak16419 5 8692010 8693341 + promoter-TSS (AT5G25170.2) -337 AT5G25170 AT5G25170 F21J6.101|F21J6_101 PPPDE putative thiol peptidase family protein protein-coding common peak16424 5 8714802 8715599 + promoter-TSS (AT5G25195.1) -980 AT5G25195 AT5G25195 - F-box/associated interaction domain protein protein-coding common peak16428 5 8738344 8740211 + promoter-TSS (AT5G25230.1) -268 AT5G25230 AT5G25230 F21J6.106|F21J6_106 Ribosomal protein S5/Elongation factor G/III/V family protein protein-coding common peak16434 5 8763413 8763772 + promoter-TSS (AT5G25270.1) -587 AT5G25270 AT5G25270 F21J6.3 Ubiquitin-like superfamily protein protein-coding VNsp peak16442 5 8792486 8793326 + promoter-TSS (AT5G25340.1) -112 AT5G25340 AT5G25340 F18G18.80|F18G18_80 Ubiquitin-like superfamily protein protein-coding common peak16449 5 8822550 8823522 + promoter-TSS (AT5G25400.1) -140 AT5G25400 AT5G25400 F18G18.140|F18G18_140 Nucleotide-sugar transporter family protein protein-coding common peak16450 5 8826664 8826998 + Intergenic 3655 AT5G25400 AT5G25400 F18G18.140|F18G18_140 Nucleotide-sugar transporter family protein protein-coding VNsp peak16453 5 8848534 8848878 + exon (AT5G25425.1, exon 2 of 2) 157 AT5G25425 AT5G25425 - glycine-rich protein protein-coding common peak16456 5 8856437 8857381 + promoter-TSS (AT5G25450.3) -8 AT5G25450 AT5G25450 F18G18.190|F18G18_190 Cytochrome bd ubiquinol oxidase, 14kDa subunit protein-coding common peak16463 5 8892920 8893445 + promoter-TSS (AT5G25540.1) -146 AT5G25540 CID6 CTC-interacting domain 6|T14C9.80|T14C9_80 CTC-interacting domain 6 protein-coding common peak16474 5 8955855 8956129 + exon (AT5G25754.1, exon 5 of 5) 2617 AT5G25754 AT5G25754 - RNA polymerase I-associated factor PAF67 protein-coding common peak16478 5 8967318 8968893 + promoter-TSS (AT5G25757.1) 410 AT5G25760 PEX4 F18A17.10|F18A17_10|UBC21|peroxin4|ubiquitin-conjugating enzyme 21 peroxin4 protein-coding common peak16481 5 8976672 8977638 + promoter-TSS (AT5G25780.1) -242 AT5G25780 EIF3B-2 ATEIF3B-2|EIF3B|EUKARYOTIC TRANSLATION INITIATION FACTOR 3B|F18A17.30|F18A17_30|eukaryotic translation initiation factor 3B-2 eukaryotic translation initiation factor 3B-2 protein-coding common peak16490 5 9022940 9024924 + promoter-TSS (AT5G25880.1) -402 AT5G25880 NADP-ME3 ATNADP-ME3|Arabidopsis thaliana NADP-malic enzyme 3|NADP-malic enzyme 3|T1N24.25|T1N24_25 NADP-malic enzyme 3 protein-coding common peak16498 5 9070656 9072748 + Intergenic -1006 AT5G25980 TGG2 BETA GLUCOSIDASE 37|BGLU37|T1N24.18|T1N24_18|glucoside glucohydrolase 2 glucoside glucohydrolase 2 protein-coding common peak16501 5 9090661 9091738 + Intergenic -3614 AT5G26010 AT5G26010 T1N24.8|T1N24_8 Protein phosphatase 2C family protein protein-coding VNsp peak16502 5 9092149 9092433 + Intergenic -4160 AT5G26030 FC1 ATFC-I|FC-I|T1N24.17|T1N24_17|ferrochelatase 1 ferrochelatase 1 protein-coding VNsp peak16506 5 9109026 9109469 + TTS (AT5G26080.1) 1303 AT5G26080 AT5G26080 T1N24.105|T1N24_105 proline-rich family protein protein-coding common peak16510 5 9119655 9121009 + promoter-TSS (AT5G26110.1) -491 AT5G26110 AT5G26110 T1N24.12|T1N24_12 Protein kinase superfamily protein protein-coding common peak16517 5 9153061 9153799 + TTS (AT5G26180.5) 1869 AT5G26190 AT5G26190 T19G15.40|T19G15_40 Cysteine/Histidine-rich C1 domain family protein protein-coding common peak16522 5 9189250 9190177 + exon (AT5G26240.2, exon 1 of 22) 273 AT5G26240 CLC-D ATCLC-D|AtCLCd|CHLORIDE CHANNEL D|CLCd|T19G15.90|T19G15_90|chloride channel D chloride channel D protein-coding common peak16524 5 9199507 9200611 + promoter-TSS (AT5G26260.1) -212 AT5G26260 AT5G26260 T19G15.110|T19G15_110 TRAF-like family protein protein-coding common peak16526 5 9218663 9219670 + Intergenic -6913 AT5G26290 AT5G26290 F9D12.6|F9D12_6 TRAF-like family protein protein-coding common peak16527 5 9231781 9232077 + TTS (AT5G26300.1) 2603 AT5G26300 AT5G26300 F9D12.5|F9D12_5 TRAF-like family protein protein-coding VNsp peak16530 5 9258539 9259343 + promoter-TSS (AT5G26360.1) 87 AT5G26360 AT5G26360 F9D12.18|F9D12_18 TCP-1/cpn60 chaperonin family protein protein-coding common peak16550 5 9374980 9375903 + exon (AT5G26610.3, exon 2 of 8) 261 AT5G26610 AT5G26610 - D111/G-patch domain-containing protein protein-coding common peak16546 5 9352124 9352810 + TTS (AT5G26630.1) 1655 AT5G26630 AT5G26630 - MADS-box transcription factor family protein protein-coding VNsp peak16545 5 9347895 9348171 + promoter-TSS (AT5G04245.1) 141 AT5G26640 AT5G26640 - anaphase-promoting complex subunit 11 RING-H2 finger protein protein-coding common peak16532 5 9275445 9277271 + intron (AT5G26667.4, intron 1 of 8) 411 AT5G26667 PYR6 CMP/UMP KINASE P-loop containing nucleoside triphosphate hydrolases superfamily protein protein-coding common peak16535 5 9282643 9285773 + promoter-TSS (AT5G26717.1) -350 AT5G26717 AT5G26717 - Putative membrane lipoprotein protein-coding common peak16539 5 9303229 9304330 + promoter-TSS (AT5G26720.1) -160 AT5G26720 AT5G26720 - ubiquitin carboxyl-terminal hydrolase-like protein protein-coding common peak16557 5 9407157 9407571 + promoter-TSS (AT5G26760.1) -58 AT5G26760 AT5G26760 F2P16.20|F2P16_20 RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein protein-coding common peak16565 5 9450191 9451644 + promoter-TSS (AT5G26860.1) -35 AT5G26860 LON1 F2P16.23|F2P16_23|LON_ARA_ARA|lon protease 1 lon protease 1 protein-coding common peak16576 5 9503466 9503947 + TTS (AT5G27000.1) 3863 AT5G27010 AT5G27010 F2P16.15|F2P16_15 ARM repeat superfamily protein protein-coding VNsp peak16580 5 9525411 9526004 + promoter-TSS (AT5G27060.3) -229 AT5G27060 RLP53 AtRLP53|F15P11.4|F15P11_4|receptor like protein 53 receptor like protein 53 protein-coding common peak16583 5 9536967 9538644 + TTS (AT5G27110.1) 639 AT5G27100 GLR2.1 ARABIDOPSIS THALIANA GLUTAMATE RECEPTOR 2.1|ATGLR2.1|T21B4.10|T21B4_10|glutamate receptor 2.1 glutamate receptor 2.1 protein-coding common peak16584 5 9539863 9540954 + promoter-TSS (AT5G27120.1) 258 AT5G27110 AT5G27110 T21B4.20|T21B4_20 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding common peak16587 5 9556918 9557615 + exon (AT5G27150.1, exon 14 of 14) 3966 AT5G27150 NHX1 AT-NHX1|ATNHX|ATNHX1|NA(+)/H(+) ANTIPORTER|Na+/H+ exchanger 1|T21B4.60|T21B4_60 Na+/H+ exchanger 1 protein-coding common peak16588 5 9561814 9562122 + Intergenic -4039 AT5G27170 AT5G27170 T21B4.80|T21B4_80 hypothetical protein protein-coding VNsp peak16589 5 9570806 9571824 + TTS (AT5G27210.1) 130 AT5G27200 ACP5 A_TM021B04.6|T21B4.110|T21B4_110|acyl carrier protein 5 acyl carrier protein 5 protein-coding VNsp peak16590 5 9572861 9574301 + intron (AT5G27210.1, intron 1 of 5) 554 AT5G27210 Cand8 T21B4.120|T21B4_120|candidate G-protein Coupled Receptor 8 Protein of unknown function, transmembrane-40 protein-coding common peak16593 5 9587205 9588217 + exon (AT5G27230.1, exon 6 of 6) 3619 AT5G27230 AT5G27230 T21B4.140|T21B4_140 Frigida-like protein protein-coding common peak16594 5 9605352 9605795 + promoter-TSS (AT5G27270.2) -3 AT5G27270 EMB976 EMBRYO DEFECTIVE 976|F21A20.6 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding common peak16613 5 9712823 9714062 + TTS (AT5G27520.1) 269 AT5G27510 AT5G27510 F21A20.220|F21A20_220 Protein kinase superfamily protein protein-coding common peak16614 5 9715531 9717167 + promoter-TSS (AT5G27520.1) 69 AT5G27520 PNC2 AtPNC2|F21A20.230|F21A20_230|peroxisomal adenine nucleotide carrier 2 peroxisomal adenine nucleotide carrier 2 protein-coding common peak16619 5 9763737 9764338 + promoter-TSS (AT5G27610.1) -98 AT5G27610 ALY1 ALWAYS EARLY 1|ARABIDOPSIS THALIANA ALWAYS EARLY 1|ATALY1|F15A18.70|F15A18_70 protein ALWAYS EARLY 1 protein-coding common peak16620 5 9770675 9771599 + promoter-TSS (AT5G27620.2) -150 AT5G27620 CYCH;1 F15A18.80|F15A18_80|cyclin H;1 cyclin H;1 protein-coding common peak16623 5 9792125 9794192 + promoter-TSS (AT5G27660.2) 402 AT5G27670 HTA7 T1G16.3|histone H2A 7 histone H2A 7 protein-coding common peak16625 5 9804457 9806285 + TTS (AT5G27690.1) 1724 AT5G27690 AT5G27690 T1G16.20|T1G16_20 Heavy metal transport/detoxification superfamily protein protein-coding common peak16629 5 9823332 9824106 + TTS (AT5G27730.4) 206 AT5G27740 EMB2775 EMB161|EMB251|EMBRYO DEFECTIVE 161|EMBRYO DEFECTIVE 251|EMBRYO DEFECTIVE 2775|RFC3|T1G16.70|T1G16_70|replication factor C 3 ATPase family associated with various cellular activities (AAA) protein-coding common peak16638 5 9862373 9865341 + TTS (AT5G27830.3) 1181 AT5G27840 TOPP8 T1G16.170|T1G16_170 Calcineurin-like metallo-phosphoesterase superfamily protein protein-coding common peak16642 5 9876280 9876769 + promoter-TSS (AT5G27860.2) -24 AT5G27860 AT5G27860 F14I23.20|F14I23_20 hypothetical protein protein-coding common peak16643 5 9888881 9889993 + Intergenic 3564 AT5G27880 AT5G27880 F14I23.40|F14I23_40 C2H2 and C2HC zinc fingers superfamily protein protein-coding common peak16655 5 9983903 9984579 + exon (AT5G27950.1, exon 1 of 10) 195 AT5G27950 AT5G27950 F15F15.20|F15F15_20 P-loop containing nucleoside triphosphate hydrolases superfamily protein protein-coding VNsp peak16656 5 10004070 10004824 + promoter-TSS (AT5G27970.1) 19 AT5G27970 AT5G27970 F15F15.40|F15F15_40 ARM repeat superfamily protein protein-coding common peak16657 5 10014856 10017234 + promoter-TSS (AT5G27990.2) -617 AT5G27990 AT5G27990 F15F15.60|F15F15_60 Pre-rRNA-processing protein TSR2, conserved region protein-coding common peak16661 5 10035754 10035999 + exon (AT5G28040.1, exon 2 of 2) -2914 AT5G28030 DES1 F15F15.100|F15F15_100|L-cysteine desulfhydrase 1 L-cysteine desulfhydrase 1 protein-coding VNsp peak16662 5 10037131 10039674 + exon (AT5G28040.1, exon 1 of 2) 599 AT5G28040 AT5G28040 F15F15.110|F15F15_110 DNA-binding storekeeper protein-related transcriptional regulator protein-coding common peak16665 5 10070391 10072156 + promoter-TSS (AT5G28060.1) -374 AT5G28060 AT5G28060 F15F15.130|F15F15_130 Ribosomal protein S24e family protein protein-coding common peak16667 5 10083853 10084573 + Intergenic 8473 AT5G28080 WNK9 AtWNK9|T24G3.10|T24G3_10 Protein kinase superfamily protein protein-coding VNsp peak16668 5 10094140 10094416 + Intergenic -1557 AT5G28080 WNK9 AtWNK9|T24G3.10|T24G3_10 Protein kinase superfamily protein protein-coding VNsp peak16673 5 10137228 10137769 + promoter-TSS (AT5G28160.1) -428 AT5G28160 AT5G28160 T24G3.90|T24G3_90 Galactose oxidase/kelch repeat superfamily protein protein-coding common peak16676 5 10188308 10189886 + exon (AT5G28210.1, exon 1 of 1) 511 AT5G28210 AT5G28210 F26C17.2|F26C17_2 mRNA capping enzyme family protein protein-coding common peak16677 5 10192690 10193257 + exon (AT5G28220.1, exon 1 of 9) 150 AT5G28220 AT5G28220 F26C17.8|F26C17_8 Protein prenylyltransferase superfamily protein protein-coding common peak16679 5 10231521 10232064 + Intergenic -6758 AT5G28262 AT5G28262 - ncRNA ncRNA VNsp peak16681 5 10239404 10240711 + TTS (AT5G28262.1) 1507 AT5G28262 AT5G28262 - ncRNA ncRNA VNsp peak16682 5 10261529 10263024 + Intergenic 14350 AT5G28288 AT5G28288 - Defensin-like (DEFL) family protein protein-coding common peak16691 5 10382132 10382440 + TTS (AT5G28462.1) 548 AT5G28462 AT5G28462 - hypothetical protein protein-coding VNsp peak16694 5 10432579 10432902 + TTS (AT5G28470.1) 2939 AT5G28470 AT5G28470 F24J2.10|F24J2_10 Major facilitator superfamily protein protein-coding VNsp peak16697 5 10457890 10458385 + Intergenic -2330 AT5G28491 AT5G28491 - hypothetical protein protein-coding VNsp peak16698 5 10480338 10480918 + TTS (AT5G28510.1) 2857 AT5G28500 AT5G28500 T26D3.4|T26D3_4 rubisco accumulation factor-like protein protein-coding VNsp peak16699 5 10490756 10491215 + Intergenic -1992 AT5G28520 AT5G28520 T26D3.3|T26D3_3 Mannose-binding lectin superfamily protein protein-coding VNsp peak16700 5 10503143 10503514 + Intergenic 10218 AT5G28520 AT5G28520 T26D3.3|T26D3_3 Mannose-binding lectin superfamily protein protein-coding common peak16701 5 10523584 10524615 + TTS (AT5G28530.1) 3201 AT5G28530 FRS10 FAR1-related sequence 10|T26D3.9|T26D3_9 FAR1-related sequence 10 protein-coding common peak16702 5 10526844 10527603 + promoter-TSS (AT5G28530.1) 77 AT5G28530 FRS10 FAR1-related sequence 10|T26D3.9|T26D3_9 FAR1-related sequence 10 protein-coding common peak16703 5 10540137 10540941 + exon (AT5G28540.1, exon 6 of 6) 3019 AT5G28540 BIP1 T26D3.10|T26D3_10 heat shock protein 70 (Hsp 70) family protein protein-coding common peak16704 5 10542987 10543952 + promoter-TSS (AT5G28540.1) 89 AT5G28540 BIP1 T26D3.10|T26D3_10 heat shock protein 70 (Hsp 70) family protein protein-coding VNsp peak16705 5 10553862 10554271 + Intergenic 5713 AT5G28550 AT5G28550 T10I18.10|T10I18_10 separase protein-coding common peak16706 5 10573489 10573683 + Intergenic 6740 AT5G28560 AT5G28560 T10I18.20|T10I18_20 hypothetical protein protein-coding VNsp peak16707 5 10596532 10597315 + Intergenic -13849 AT5G28610 AT5G28610 T10I18.2|T10I18_2 LOW protein: ATP-dependent RNA helicase DRS1-like protein protein-coding VNsp peak16712 5 10653739 10654440 + Intergenic -4023 AT5G28640 AN3 ANGUSTIFOLIA 3|ARABIDOPSIS GRF1-INTERACTING FACTOR 1|ATGIF1|F4I4.20|F4I4_20|GIF|GIF1|GRF1-INTERACTING FACTOR|GRF1-INTERACTING FACTOR 1 SSXT family protein protein-coding common peak16714 5 10664652 10666175 + Intergenic -9299 AT5G28646 WVD2 WAVE-DAMPENED 2 TPX2 (targeting protein for Xklp2) protein family protein-coding VNsp peak16716 5 10721557 10723484 + promoter-TSS (AT5G28690.1) -159 AT5G28680 ANX2 ANXUR2|F4I4.60|F4I4_60 Malectin/receptor-like protein kinase family protein protein-coding VNsp peak16717 5 10759819 10760157 + Intergenic -16143 AT5G28720 AT5G28720 T32B20.10|T32B20_10 hypothetical protein protein-coding VNsp peak16719 5 10789823 10790465 + Intergenic -4416 AT5G28750 AT5G28750 T32B20.2|T32B20_2 Bacterial sec-independent translocation protein mttA/Hcf106 protein-coding VNsp peak16722 5 10815611 10816456 + Intergenic -1860 AT5G28780 AT5G28780 T32B20.70|T32B20_70 PIF1 helicase protein-coding VNsp peak16723 5 10820966 10821244 + Intergenic -2251 AT5G28810 AT5G28810 T32B20.100|T32B20_100 Ulp1 protease family protein protein-coding VNsp peak16726 5 10832940 10833391 + TTS (AT5G28820.1) 1366 AT5G28820 AT5G28820 T32B20.110|T32B20_110 Myb/SANT-like DNA-binding domain protein protein-coding VNsp peak16727 5 10840210 10841310 + promoter-TSS (AT5G28823.1) -934 AT5G28823 AT5G28823 - hypothetical protein protein-coding VNsp peak16728 5 10845606 10846418 + promoter-TSS (AT5G28824.1) -256 AT5G28824 AT5G28824 - ncRNA ncRNA VNsp peak16729 5 10853824 10854191 + Intergenic -2654 AT5G28830 AT5G28830 F7P1.10|F7P1_10 calcium-binding EF hand family protein protein-coding VNsp peak16730 5 10856659 10857605 + intron (AT5G28830.1, intron 1 of 3) 471 AT5G28830 AT5G28830 F7P1.10|F7P1_10 calcium-binding EF hand family protein protein-coding common peak16734 5 10876265 10876567 + TTS (AT5G28850.2) 5028 AT5G28850 AT5G28850 F7P1.30|F7P1_30 Calcium-binding EF-hand family protein protein-coding common peak16735 5 10893026 10894074 + Intergenic -3191 AT5G28885 AT5G28885 - hypothetical protein protein-coding VNsp peak16736 5 10901469 10901850 + Intergenic 4918 AT5G28885 AT5G28885 - hypothetical protein protein-coding VNsp peak16737 5 10902168 10903585 + Intergenic 6135 AT5G28885 AT5G28885 - hypothetical protein protein-coding VNsp peak16738 5 10905710 10906173 + Intergenic 9200 AT5G28885 AT5G28885 - hypothetical protein protein-coding VNsp peak16739 5 10929415 10929993 + TTS (AT5G28910.1) 3357 AT5G28910 AT5G28910 F7P1.2 alpha-(1,6)-fucosyltransferase protein-coding common peak16740 5 10933521 10935244 + Intergenic -1194 AT5G28910 AT5G28910 F7P1.2 alpha-(1,6)-fucosyltransferase protein-coding common peak16741 5 10939977 10941476 + exon (AT5G28920.1, exon 8 of 8) 693 AT5G28919 AT5G28919 - hypothetical protein protein-coding common peak16743 5 10977154 10977693 + Intergenic -15082 AT5G28950 AT5G28950 F3F24.50|F3F24_50 nuclease protein-coding VNsp peak16744 5 11019178 11019495 + Intergenic 4939 AT5G29000 PHL1 F3F24.100|F3F24_100|PHR1-like 1 Homeodomain-like superfamily protein protein-coding VNsp peak16746 5 11028728 11029020 + Intergenic -3896 AT5G29000 PHL1 F3F24.100|F3F24_100|PHR1-like 1 Homeodomain-like superfamily protein protein-coding VNsp peak16747 5 11033208 11033504 + Intergenic -8378 AT5G29000 PHL1 F3F24.100|F3F24_100|PHR1-like 1 Homeodomain-like superfamily protein protein-coding VNsp peak16748 5 11070895 11071292 + Intergenic -40599 AT5G29050 AT5G29050 F23C8.20|F23C8_20 hypothetical protein (DUF3287) protein-coding VNsp peak16752 5 11190115 11190768 + TTS (AT5G29560.1) 1526 AT5G29560 AT5G29560 - caleosin-related family protein protein-coding common peak16754 5 11276657 11277013 + Intergenic -3742 AT5G29613 AT5G29613 - hypothetical protein protein-coding VNsp peak16755 5 11277286 11278053 + Intergenic -2908 AT5G29613 AT5G29613 - hypothetical protein protein-coding VNsp peak16756 5 11288678 11290245 + Intergenic 4323 AT5G29624 AT5G29624 - Cysteine/Histidine-rich C1 domain family protein protein-coding VNsp peak16769 5 11558601 11558924 + Intergenic 8333 AT5G30360 AT5G30360 - hypothetical protein protein-coding VNsp peak16770 5 11567232 11567862 + Intergenic 17118 AT5G30360 AT5G30360 - hypothetical protein protein-coding VNsp peak16771 5 11588708 11588910 + Intergenic -22978 AT5G30490 AT5G30490 - craniofacial development-like protein protein-coding VNsp peak16760 5 11379499 11380546 + promoter-TSS (AT5G30495.1) -80 AT5G30495 AT5G30495 - Fcf2 pre-rRNA processing protein protein-coding common peak16761 5 11388041 11388559 + Intergenic 8198 AT5G30495 AT5G30495 - Fcf2 pre-rRNA processing protein protein-coding VNsp peak16762 5 11389191 11389874 + Intergenic 9430 AT5G30495 AT5G30495 - Fcf2 pre-rRNA processing protein protein-coding VNsp peak16763 5 11416051 11417252 + Intergenic 36549 AT5G30495 AT5G30495 - Fcf2 pre-rRNA processing protein protein-coding VNsp peak16764 5 11418347 11418902 + Intergenic 38522 AT5G30495 AT5G30495 - Fcf2 pre-rRNA processing protein protein-coding VNsp peak16773 5 11614137 11615631 + promoter-TSS (AT5G30500.1) -366 AT5G30500 GolS10 galactinol synthase 10 Nucleotide-diphospho-sugar transferases superfamily protein protein-coding common peak16774 5 11620921 11621926 + promoter-TSS (AT5G30510.1) -125 AT5G30510 RPS1 ARRPS1|PRPS1|plastid ribosomal protein S1|ribosomal protein S1 ribosomal protein S1 protein-coding common peak16775 5 11634860 11635494 + Intergenic 1461 AT5G30520 AT5G30520 - hypothetical protein protein-coding VNsp peak16776 5 11638041 11638310 + Intergenic -1537 AT5G30520 AT5G30520 - hypothetical protein protein-coding VNsp peak16767 5 11526783 11527506 + Intergenic 16624 AT5G31412 AT5G31412 - hAT transposon superfamily protein protein-coding VNsp peak16768 5 11544247 11544618 + promoter-TSS (AT5G31412.1) -664 AT5G31412 AT5G31412 - hAT transposon superfamily protein protein-coding VNsp peak16787 5 12076352 12077377 + promoter-TSS (AT5G32440.2) -29 AT5G32440 AT5G32440 F18O9.50|F18O9_50 Ubiquitin system component Cue protein protein-coding common peak16788 5 12078371 12079654 + promoter-TSS (AT5G32450.1) -516 AT5G32450 AT5G32450 F18O9.60|F18O9_60 RNA binding (RRM/RBD/RNP motifs) family protein protein-coding common peak16791 5 12182796 12183063 + Intergenic 41393 AT5G32590 AT5G32590 F3D18.80|F3D18_80 myosin heavy chain-like protein protein-coding VNsp peak16792 5 12197038 12197459 + Intergenic 27074 AT5G32590 AT5G32590 F3D18.80|F3D18_80 myosin heavy chain-like protein protein-coding common peak16793 5 12208219 12208724 + Intergenic 15851 AT5G32590 AT5G32590 F3D18.80|F3D18_80 myosin heavy chain-like protein protein-coding common peak16794 5 12262498 12263198 + promoter-TSS (AT5G32613.1) -407 AT5G32613 AT5G32613 - Zinc knuckle (CCHC-type) family protein protein-coding VNsp peak16795 5 12273779 12274447 + Intergenic 3978 AT5G32619 AT5G32619 - Defensin-like (DEFL) family protein protein-coding VNsp peak16796 5 12301520 12302006 + Intergenic -23672 AT5G32619 AT5G32619 - Defensin-like (DEFL) family protein protein-coding VNsp peak16797 5 12302774 12303691 + Intergenic -25141 AT5G32619 AT5G32619 - Defensin-like (DEFL) family protein protein-coding VNsp peak16798 5 12325244 12325818 + Intergenic -47440 AT5G32619 AT5G32619 - Defensin-like (DEFL) family protein protein-coding VNsp peak16799 5 12331882 12332862 + Intergenic -54281 AT5G32619 AT5G32619 - Defensin-like (DEFL) family protein protein-coding VNsp peak16800 5 12353117 12353551 + Intergenic -75243 AT5G32619 AT5G32619 - Defensin-like (DEFL) family protein protein-coding common peak16805 5 12448698 12449400 + Intergenic -6760 AT5G32670 AT5G32670 - START domain protein protein-coding VNsp peak16806 5 12464833 12465035 + TTS (AT5G33210.1) 779 AT5G33210 SRS8 SHI-related sequence 8|T29A4.20|T29A4_20 SHI-related sequence 8 protein-coding VNsp peak16807 5 12478444 12478816 + Intergenic -12866 AT5G33210 SRS8 SHI-related sequence 8|T29A4.20|T29A4_20 SHI-related sequence 8 protein-coding VNsp peak16812 5 12568126 12568428 + Intergenic -2497 AT5G33300 AT5G33300 F19N2.20|F19N2_20 chromosome-associated kinesin-like protein protein-coding VNsp peak16813 5 12584336 12584843 + Intergenic -4152 AT5G33320 CUE1 ARABIDOPSIS THALIANA PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR|ARAPPT|CAB UNDEREXPRESSED 1|F19N2.40|F19N2_40|PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR|PPT Glucose-6-phosphate/phosphate translocator-like protein protein-coding VNsp peak16816 5 12615944 12617256 + Intergenic -11768 AT5G33370 AT5G33370 F19N2.90|F19N2_90 GDSL-like Lipase/Acylhydrolase superfamily protein protein-coding common peak16820 5 12684317 12684849 + Intergenic -2463 AT5G33399 AT5G33399 - ncRNA ncRNA VNsp peak16821 5 12701969 12703188 + Intergenic -20458 AT5G33399 AT5G33399 - ncRNA ncRNA VNsp peak16822 5 12703782 12704626 + Intergenic -22084 AT5G33399 AT5G33399 - ncRNA ncRNA VNsp peak16823 5 12736393 12736877 + Intergenic 2577 AT5G33439 AT5G33439 - ncRNA ncRNA VNsp peak16824 5 12780992 12781745 + Intergenic -3471 AT5G33806 AT5G33806 - hypothetical protein protein-coding VNsp peak16825 5 12901645 12902463 + Intergenic -18312 AT5G34581 AT5G34581 - hydroxyproline-rich glycoprotein family protein protein-coding VNsp peak16826 5 12911271 12911933 + Intergenic -8764 AT5G34581 AT5G34581 - hydroxyproline-rich glycoprotein family protein protein-coding VNsp peak16827 5 12913281 12914045 + Intergenic -6703 AT5G34581 AT5G34581 - hydroxyproline-rich glycoprotein family protein protein-coding VNsp peak16828 5 12964261 12965730 + Intergenic -1103 AT5G34780 AT5G34780 T3J11.40|T3J11_40 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein protein-coding VNsp peak16832 5 13094377 13094726 + promoter-TSS (AT5G34828.1) -207 AT5G34828 AT5G34828 - Plant thionin family protein protein-coding VNsp peak16835 5 13113782 13114433 + Intergenic -2451 AT5G34850 PAP26 ATPAP26|PURPLE ACID PHOSPHATASE 26|T5E15.10|T5E15_10|purple acid phosphatase 26 purple acid phosphatase 26 protein-coding VNsp peak16836 5 13139348 13140736 + Intergenic -28386 AT5G34850 PAP26 ATPAP26|PURPLE ACID PHOSPHATASE 26|T5E15.10|T5E15_10|purple acid phosphatase 26 purple acid phosphatase 26 protein-coding VNsp peak16829 5 13058543 13058827 + Intergenic -2350 AT5G34869 AT5G34869 - hypothetical protein protein-coding VNsp peak16830 5 13065864 13066594 + Intergenic 5194 AT5G34869 AT5G34869 - hypothetical protein protein-coding common peak16837 5 13176912 13177693 + Intergenic -8219 AT5G34870 AT5G34870 T2L5.20|T2L5_20 zinc knuckle (CCHC-type) family protein protein-coding VNsp peak16831 5 13079332 13079827 + Intergenic -5458 AT5G34871 AT5G34871 - ncRNA ncRNA common peak16839 5 13240665 13241170 + Intergenic -2033 AT5G34940 GUS3 AtGUS3|T2L5.6|glucuronidase 3 glucuronidase 3 protein-coding VNsp peak16841 5 13309328 13310467 + Intergenic 1957 AT5G35050 AT5G35050 MSK10.16|MSK10_16 hypothetical protein (DUF1985) protein-coding VNsp peak16842 5 13312796 13313105 + Intergenic -1096 AT5G35050 AT5G35050 MSK10.16|MSK10_16 hypothetical protein (DUF1985) protein-coding VNsp peak16843 5 13339395 13339689 + Intergenic 3067 AT5G35069 AT5G35069 - hypothetical protein protein-coding VNsp peak16844 5 13346871 13347231 + Intergenic 9833 AT5G35080 OS9 AtOS9|F7N22.4|F7N22_4 ER lectin-like protein protein-coding VNsp peak16850 5 13418186 13419723 + promoter-TSS (AT5G35170.1) -126 AT5G35170 AT5G35170 T25C13.50|T25C13_50 adenylate kinase family protein protein-coding common peak16852 5 13433519 13433833 + promoter-TSS (AT5G35190.1) -475 AT5G35190 EXT13 T25C13.70|T25C13_70|extensin 13 proline-rich extensin-like family protein protein-coding common peak16853 5 13461596 13462271 + TTS (AT5G35200.1) 4164 AT5G35200 AT5G35200 T25C13.80|T25C13_80 ENTH/ANTH/VHS superfamily protein protein-coding VNsp peak16855 5 13470737 13471764 + Intergenic -5100 AT5G35200 AT5G35200 T25C13.80|T25C13_80 ENTH/ANTH/VHS superfamily protein protein-coding common peak16857 5 13481670 13482832 + exon (AT5G35210.1, exon 2 of 17) 340 AT5G35210 PTM PHD type transcription factor with transmembrane domains|T25C13.90|T25C13_90 PHD type transcription factor with transmembrane domain protein (PTM) protein-coding common peak16860 5 13525726 13526328 + promoter-TSS (AT5G35330.2) -193 AT5G35330 MBD02 ATMBD2|MBD2|METHYL-CPG-BINDING DOMAIN PROTEIN 2|T26D22.18|T26D22_18|methyl-CPG-binding domain protein 02 methyl-CPG-binding domain protein 02 protein-coding common peak16861 5 13532281 13532621 + Intergenic -6617 AT5G35330 MBD02 ATMBD2|MBD2|METHYL-CPG-BINDING DOMAIN PROTEIN 2|T26D22.18|T26D22_18|methyl-CPG-binding domain protein 02 methyl-CPG-binding domain protein 02 protein-coding VNsp peak16862 5 13583924 13584345 + promoter-TSS (AT5G35360.2) -24 AT5G35360 CAC2 ACETYL-COA CARBOXYLASE|T26D22.8|T26D22_8|acetyl Co-enzyme a carboxylase biotin carboxylase subunit acetyl Co-enzyme a carboxylase biotin carboxylase subunit protein-coding common peak16869 5 13638339 13639026 + TTS (AT5G35410.2) 4237 AT5G35410 SOS2 ATSOS2|CBL-INTERACTING PROTEIN KINASE 24|CIPK24|K21B8.3|K21B8_3|SALT OVERLY SENSITIVE 2|SNF1-RELATED PROTEIN KINASE 3.11|SNRK3.11 Protein kinase superfamily protein protein-coding common peak16876 5 13724347 13724550 + Intergenic -2295 AT5G35550 TT2 ATMYB123|ATTT2|MOK9.18|MOK9_18|MYB DOMAIN PROTEIN 123|MYB123|TRANSPARENT TESTA 2 Duplicated homeodomain-like superfamily protein protein-coding VNsp peak16883 5 13778208 13778586 + Intergenic -6685 AT5G35600 HDA7 AtHDA7|K2K18.5|K2K18_5|histone deacetylase7 histone deacetylase7 protein-coding common peak16885 5 13818291 13818596 + Intergenic 1850 AT5G35610 AT5G35610 MJE4.6|MJE4_6 Paired amphipathic helix (PAH2) superfamily protein protein-coding VNsp peak16888 5 13839946 13840249 + Intergenic 5464 AT5G35640 AT5G35640 MJE4.10|MJE4_10 Putative endonuclease or glycosyl hydrolase protein-coding VNsp peak16890 5 13854973 13855580 + promoter-TSS (AT5G35670.1) -460 AT5G35670 iqd33 IQ-domain 33|MXH1.1|MXH1_1 IQ-domain 33 protein-coding VNsp peak16891 5 13857739 13859222 + TTS (AT5G35670.1) 533 AT5G35680 AT5G35680 MXH1.2|MXH1_2 Nucleic acid-binding, OB-fold-like protein protein-coding common peak16893 5 13872685 13873048 + TTS (AT5G35698.1) 1151 AT5G35698 AT5G35698 - Plant thionin family protein protein-coding common peak16894 5 13875808 13876221 + intron (AT5G35700.1, intron 3 of 14) 862 AT5G35700 FIM5 FIM2|FIMBRIN5|MXH1.5|MXH1_5|fimbrin-like protein 2 fimbrin-like protein 2 protein-coding common peak16895 5 13876634 13877165 + promoter-TSS (AT5G35700.1) -23 AT5G35700 FIM5 FIM2|FIMBRIN5|MXH1.5|MXH1_5|fimbrin-like protein 2 fimbrin-like protein 2 protein-coding common peak16898 5 13890795 13891401 + Intergenic -2504 AT5G35730 AT5G35730 MXH1.10|MXH1_10 EXS (ERD1/XPR1/SYG1) family protein protein-coding VNsp peak16899 5 13893342 13893895 + promoter-TSS (AT5G35730.1) 16 AT5G35730 AT5G35730 MXH1.10|MXH1_10 EXS (ERD1/XPR1/SYG1) family protein protein-coding common peak16900 5 13902522 13903370 + exon (AT5G35735.1, exon 1 of 2) 272 AT5G35735 AT5G35735 - Auxin-responsive family protein protein-coding common peak16903 5 13948582 13949668 + Intergenic -8258 AT5G35770 SAP MXH1.20|MXH1_20|STERILE APETALA Transducin/WD40 repeat-like superfamily protein protein-coding common peak16906 5 13971484 13972599 + Intergenic -12211 AT5G35790 G6PD1 MWP19.3|glucose-6-phosphate dehydrogenase 1 glucose-6-phosphate dehydrogenase 1 protein-coding VNsp peak16910 5 14011563 14012462 + TTS (AT5G35840.1) 4200 AT5G35840 PHYC MIK22.15|MIK22_15|PHYTOCHROME C|phytochrome C phytochrome C protein-coding VNsp peak16912 5 14034119 14036308 + exon (AT5G35910.1, exon 1 of 14) 280 AT5G35910 AT5G35910 MIK22.22|MIK22_22 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein protein-coding common peak16913 5 14040042 14040325 + promoter-TSS (AT5G35913.1) -552 AT5G35913 AT5G35913 - hypothetical protein protein-coding VNsp peak16915 5 14066338 14067304 + promoter-TSS (AT5G35927.1) -648 AT5G35927 AT5G35927 - hypothetical protein protein-coding common peak16917 5 14089340 14089652 + Intergenic -1078 AT5G35940 AT5G35940 MEE13.1|MEE13_1 Mannose-binding lectin superfamily protein protein-coding common peak16918 5 14118364 14119354 + exon (AT5G35970.1, exon 7 of 7) 4503 AT5G35970 AT5G35970 MEE13.8|MEE13_8 P-loop containing nucleoside triphosphate hydrolases superfamily protein protein-coding common peak16924 5 14142990 14143626 + promoter-TSS (AT5G36002.5) -5 AT5G36002 AT5G36002 - ncRNA ncRNA common peak16925 5 14183277 14183502 + Intergenic -1034 AT5G36080 AT5G36080 MAB16.2|MAB16_2 Myb/SANT-like DNA-binding domain protein protein-coding VNsp peak16929 5 14212975 14213502 + promoter-TSS (AT5G36140.1) 55 AT5G36140 CYP716A2 ''cytochrome P450|MAB16.9|MAB16_9|cytochrome P450|family 716|polypeptide 2|polypeptide 2''|subfamily A cytochrome P450, family 716, subfamily A, polypeptide 2 protein-coding common peak16931 5 14240172 14241104 + exon (AT5G36180.4, exon 6 of 11) 1234 AT5G36180 scpl1 MAB16.13|MAB16_13|serine carboxypeptidase-like 1 serine carboxypeptidase-like 1 protein-coding common peak16933 5 14273016 14274364 + TTS (AT5G36228.1) 155 AT5G36230 AT5G36230 T30G6.9|T30G6_9 ARM repeat superfamily protein protein-coding common peak16935 5 14284101 14285408 + TTS (AT5G36250.3) 2667 AT5G36250 PP2C74 T30G6.11|T30G6_11|protein phosphatase 2C 74 Protein phosphatase 2C family protein protein-coding common peak16936 5 14287940 14288457 + exon (AT5G36260.1, exon 1 of 10) 211 AT5G36260 AT5G36260 T30G6.12|T30G6_12 Eukaryotic aspartyl protease family protein protein-coding common peak16939 5 14300630 14301275 + Intergenic -1409 AT5G36280 AT5G36280 T30G6.15|T30G6_15 acyl carrier protein protein-coding VNsp peak16941 5 14309563 14310741 + Intergenic 7490 AT5G36290 AT5G36290 T30G6.16|T30G6_16 Uncharacterized protein family (UPF0016) protein-coding VNsp peak16942 5 14517535 14517764 + promoter-TSS (AT5G36870.2) -359 AT5G36870 GSL09 ATGSL09|F5H8.14|F5H8_14|atgsl9|glucan synthase-like 9|gsl09 glucan synthase-like 9 protein-coding VNsp peak16943 5 14533065 14534315 + TTS (AT5G36880.2) 5909 AT5G36880 ACS acetyl-CoA synthetase acetyl-CoA synthetase protein-coding common peak16945 5 14542524 14542966 + intron (AT5G36890.1, intron 11 of 12) -2304 AT5G36880 ACS acetyl-CoA synthetase acetyl-CoA synthetase protein-coding VNsp peak16947 5 14573218 14574776 + promoter-TSS (AT5G36930.4) -791 AT5G36930 AT5G36930 MLF18.50|MLF18_50 Disease resistance protein (TIR-NBS-LRR class) family protein-coding VNsp peak16948 5 14586017 14586969 + Intergenic -3622 AT5G36940 CAT3 MLF18.60|MLF18_60|cationic amino acid transporter 3 cationic amino acid transporter 3 protein-coding common peak16949 5 14589768 14590476 + promoter-TSS (AT5G36940.1) 7 AT5G36940 CAT3 MLF18.60|MLF18_60|cationic amino acid transporter 3 cationic amino acid transporter 3 protein-coding common peak16950 5 14594363 14595117 + promoter-TSS (AT5G36950.1) -229 AT5G36950 DEG10 DegP protease 10|DegP10|MLF18.70|MLF18_70|degradation of periplasmic proteins 10 DegP protease 10 protein-coding common peak16954 5 14611278 14612553 + Intergenic -4161 AT5G36980 AT5G36980 MLF18.16|MLF18_16 U3 small nucleolar RNA-associated protein protein-coding VNsp peak16959 5 14654071 14654888 + Intergenic 3566 AT5G37070 AT5G37070 MJG14.7|MJG14_7 hypothetical protein (Protein of unknown function, DUF538) protein-coding VNsp peak16960 5 14676179 14677126 + Intergenic -4696 AT5G37130 AT5G37130 MJG14.18|MJG14_18 Protein prenylyltransferase superfamily protein protein-coding VNsp peak16961 5 14680909 14681990 + exon (AT5G37130.1, exon 1 of 20) 101 AT5G37130 AT5G37130 MJG14.18|MJG14_18 Protein prenylyltransferase superfamily protein protein-coding common peak16963 5 14698740 14699476 + Intergenic -2222 AT5G37150 AT5G37150 MJG14.22|MJG14_22 P-loop containing nucleoside triphosphate hydrolases superfamily protein protein-coding VNsp peak16966 5 14726736 14728481 + promoter-TSS (AT5G37190.3) -224 AT5G37200 AT5G37200 MSK20.3|MSK20_3 RING/U-box superfamily protein protein-coding common peak16968 5 14733964 14736126 + promoter-TSS (AT5G37230.1) -71 AT5G37230 AT5G37230 MNJ8.2|MNJ8_2 RING/U-box superfamily protein protein-coding common peak16975 5 14776020 14777752 + promoter-TSS (AT5G37310.1) -629 AT5G37310 AT5G37310 MNJ8.100|MNJ8_100 Endomembrane protein 70 protein family protein-coding common peak16978 5 14804158 14804509 + TTS (AT5G37360.1) 3942 AT5G37360 AT5G37360 MNJ8.18|MNJ8_18 LOW protein: ammonium transporter 1-like protein protein-coding VNsp peak16982 5 14821985 14822851 + Intergenic -3072 AT5G37380 AT5G37380 MNJ8.20|MNJ8_20 Chaperone DnaJ-domain superfamily protein protein-coding common peak16983 5 14834064 14834467 + promoter-TSS (AT5G37400.1) 57 AT5G37400 AT5G37400 T25O11.5|T25O11_5 hypothetical protein (DUF577) protein-coding common peak16986 5 14845266 14845790 + exon (AT5G37440.1, exon 1 of 1) 157 AT5G37440 AT5G37440 T25O11.9|T25O11_9 Chaperone DnaJ-domain superfamily protein protein-coding common peak16992 5 14887535 14889030 + TTS (AT5G37500.2) 853 AT5G37490 AT5G37490 MPA22.3|MPA22_3 ARM repeat superfamily protein protein-coding common peak16993 5 14894199 14895712 + exon (AT5G37500.4, exon 1 of 10) 278 AT5G37500 GORK MPA22.4|MPA22_4|gated outwardly-rectifying K+ channel gated outwardly-rectifying K+ channel protein-coding common peak16999 5 14922003 14922195 + exon (AT5G37560.1, exon 1 of 3) 113 AT5G37560 AT5G37560 K12B20.10|K12B20_10 RING/U-box superfamily protein protein-coding common peak17001 5 14925236 14925500 + exon (AT5G37570.1, exon 1 of 1) 957 AT5G37570 AT5G37570 K12B20.3|K12B20_3 Pentatricopeptide repeat (PPR-like) superfamily protein protein-coding common peak17002 5 14925830 14926570 + TTS (AT5G37590.1) 125 AT5G37570 AT5G37570 K12B20.3|K12B20_3 Pentatricopeptide repeat (PPR-like) superfamily protein protein-coding common peak17004 5 14939728 14940129 + Intergenic 1896 AT5G37610 AT5G37610 K12B20.7|K12B20_7 Eukaryotic porin family protein protein-coding common peak17007 5 14953395 14954436 + promoter-TSS (AT5G37640.1) -165 AT5G37640 UBQ9 K12B20.90|K12B20_90|ubiquitin 9 ubiquitin 9 protein-coding common peak17011 5 14973186 14974442 + exon (AT5G37690.2, exon 6 of 6) 2415 AT5G37690 AT5G37690 AT5G37700|K12B20.140|K12B20_140 SGNH hydrolase-type esterase superfamily protein protein-coding common peak17015 5 14994122 14994488 + TTS (AT5G37740.2) -1452 AT5G37750 AT5G37750 K12B20.23|K12B20_23 Chaperone DnaJ-domain superfamily protein protein-coding common peak17027 5 15036866 15038428 + exon (AT5G37800.1, exon 5 of 5) 1581 AT5G37800 RSL1 ARABIDOPSIS THALIANA RHD SIX-LIKE 1|ATRSL1|K22F20.8|K22F20_8|RHD SIX-LIKE 1 RHD SIX-LIKE 1 protein-coding common peak17031 5 15075040 15075263 + promoter-TSS (AT5G37870.1) -300 AT5G37870 AT5G37870 K18L3.4|K18L3_4 Protein with RING/U-box and TRAF-like domain protein-coding common peak17033 5 15092823 15093112 + TTS (AT5G37900.1) -1012 AT5G37890 AT5G37890 AtSINAL7|K18L3.9|K18L3_9|SINA like 7|SINAL7 Protein with RING/U-box and TRAF-like domain protein-coding VNsp peak17040 5 15120374 15120941 + promoter-TSS (AT5G37960.1) -781 AT5G37960 AT5G37960 K18L3.120|K18L3_120 GroES-like family protein protein-coding VNsp peak17048 5 15144138 15144948 + Intergenic 2843 AT5G38000 AT5G38000 K19A23.1|K19A23_1 Zinc-binding dehydrogenase family protein protein-coding common peak17063 5 15276954 15277656 + exon (AT5G38240.3, exon 4 of 4) 2012 AT5G38240 AT5G38240 MXA21.130|MXA21_130 Protein kinase family protein protein-coding common peak17068 5 15326976 15327435 + TTS (AT5G38344.1) -1364 AT5G38350 AT5G38350 MXI10.1|MXI10_1 Disease resistance protein (NBS-LRR class) family protein-coding VNsp peak17070 5 15339593 15339989 + Intergenic -4657 AT5G38378 AT5G38378 - Plant thionin family protein protein-coding VNsp peak17071 5 15347811 15348684 + exon (AT5G38380.1, exon 9 of 9) 2587 AT5G38380 AT5G38380 MXI10.5|MXI10_5 zinc transporter protein-coding common peak17072 5 15358631 15358915 + Intergenic -4001 AT5G38386 AT5G38386 - F-box/RNI-like superfamily protein protein-coding VNsp peak17075 5 15366877 15367800 + promoter-TSS (AT5G38391.1) -916 AT5G38391 AT5G38391 - F-box/RNI superfamily protein protein-coding VNsp peak17079 5 15378908 15379243 + promoter-TSS (AT5G05745.1) -433 AT5G38410 RBCS3B MXI10.13|MXI10_13|Rubisco small subunit 3B Ribulose bisphosphate carboxylase (small chain) family protein protein-coding common peak17091 5 15420385 15421632 + promoter-TSS (AT5G38510.3) -281 AT5G38520 AT5G38520 MBB18.5|MBB18_5 alpha/beta-Hydrolases superfamily protein protein-coding common peak17112 5 15568576 15569950 + promoter-TSS (AT5G38880.1) -13 AT5G38880 AUG5 K15E6.9|K15E6_9|augmin subunit 5 HAUS augmin-like complex subunit protein-coding common peak17115 5 15587446 15588752 + promoter-TSS (AT5G38940.1) -524 AT5G38940 AT5G38940 K15E6.120|K15E6_120 RmlC-like cupins superfamily protein protein-coding common peak17124 5 15643477 15644464 + TTS (AT5G39080.1) 477 AT5G39090 AT5G39090 MXF12.100|MXF12_100 HXXXD-type acyl-transferase family protein protein-coding common peak17125 5 15656913 15657478 + TTS (AT5G39110.1) 1437 AT5G39110 AT5G39110 MXF12.120|MXF12_120 RmlC-like cupins superfamily protein protein-coding VNsp peak17126 5 15669759 15669998 + TTS (AT5G39150.1) 1026 AT5G39150 AT5G39150 MXF12.160|MXF12_160 RmlC-like cupins superfamily protein protein-coding VNsp peak17127 5 15683318 15683679 + TTS (AT5G39180.1) 973 AT5G39180 AT5G39180 K3K3.30|K3K3_30 RmlC-like cupins superfamily protein protein-coding VNsp peak17128 5 15694955 15695736 + promoter-TSS (AT5G39200.1) -303 AT5G39200 AT5G39200 K3K3.7|K3K3_7 myb-like protein Q protein-coding VNsp peak17129 5 15724157 15726538 + TTS (AT5G39260.1) 870 AT5G39250 AT5G39250 K3K3.16|K3K3_16 F-box family protein protein-coding common peak17131 5 15738431 15738719 + promoter-TSS (AT5G39300.1) -96 AT5G39300 EXPA25 ATEXP25|ATEXPA25|ATHEXP ALPHA 1.18|EXP25|EXPANSIN 25|K3K3.150|K3K3_150|expansin A25 expansin A25 protein-coding common peak17133 5 15741680 15742803 + promoter-TSS (AT5G39320.1) -302 AT5G39320 UDG4 K3K3.170|K3K3_170|UDP-glucose dehydrogenase 4 UDP-glucose 6-dehydrogenase family protein protein-coding common peak17134 5 15750534 15751468 + TTS (AT5G39340.1) 126 AT5G39350 AT5G39350 MUL8.30|MUL8_30 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding common peak17138 5 15765316 15767129 + promoter-TSS (AT5G39390.1) 185 AT5G39400 PTEN1 ATPTEN1|MUL8.8|MUL8_8|Phosphatase and TENsin homolog deleted on chromosome ten 1 Calcium/lipid-binding (CaLB) phosphatase protein-coding common peak17142 5 15776343 15777217 + exon (AT5G39430.1, exon 3 of 9) 819 AT5G39430 AT5G39430 MUL8.11|MUL8_11 DUF1336 family protein, putative (DUF1336) protein-coding common peak17148 5 15830908 15831573 + Intergenic 3180 AT5G39540 AT5G39540 MIJ24.2|MIJ24_2 F-box associated ubiquitination effector family protein protein-coding VNsp peak17160 5 15888181 15888884 + intron (AT5G39690.1, intron 2 of 3) 361 AT5G39690 NAC093 ANAC093|MIJ24.19|MIJ24_19|NAC domain containing protein 93 NAC domain containing protein 93 protein-coding VNsp peak17164 5 15927053 15927270 + exon (AT5G39770.1, exon 2 of 32) 388 AT5G39770 AT5G39770 MKM21.10|MKM21_10 Restriction endonuclease, type II-like superfamily protein protein-coding VNsp peak17171 5 15949465 15950026 + promoter-TSS (AT5G39850.1) -165 AT5G39850 AT5G39850 MYH19.10|MYH19_10 Ribosomal protein S4 protein-coding common peak17174 5 15970661 15971693 + exon (AT5G39880.1, exon 1 of 1) 290 AT5G39880 AT5G39880 MYH19.7|MYH19_7 transmembrane protein protein-coding VNsp peak17179 5 15993759 15994526 + exon (AT5G39960.1, exon 1 of 9) 189 AT5G39960 AT5G39960 MYH19.120|MYH19_120 GTP-binding protein protein-coding common peak17183 5 16029264 16030493 + exon (AT5G40040.1, exon 1 of 1) 457 AT5G40040 AT5G40040 MUD12.2|MUD12_2 60S acidic ribosomal protein family protein-coding common peak17187 5 16060699 16061087 + promoter-TSS (AT5G40155.1) 150 AT5G40150 AT5G40150 MSN9.50|MSN9_50 Peroxidase superfamily protein protein-coding common peak17189 5 16067801 16068165 + promoter-TSS (AT5G40170.1) 115 AT5G40180 AT5G40180 MSN9.8|MSN9_8 Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein protein-coding common peak17193 5 16096735 16098384 + promoter-TSS (AT5G40270.2) -314 AT5G40270 AT5G40270 MSN9.18|MSN9_18 HD domain-containing metal-dependent phosphohydrolase family protein protein-coding common peak17208 5 16173393 16174732 + TTS (AT5G40410.1) 721 AT5G40420 OLEO2 OLE2|OLEOSIN 2|oleosin 2 oleosin 2 protein-coding common peak17215 5 16226974 16228220 + promoter-TSS (AT5G40500.2) -174 AT5G40500 AT5G40500 MNF13.2|MNF13_2 hypothetical protein protein-coding VNsp peak17223 5 16264853 16265202 + exon (AT5G40610.1, exon 10 of 10) 2379 AT5G40610 GPDHp Glycerol-3-phosphate dehydrogenase plastidic|MNF13.130|MNF13_130 NAD-dependent glycerol-3-phosphate dehydrogenase family protein protein-coding common peak17228 5 16279162 16279533 + TTS (AT5G40645.1) 1646 AT5G40645 AT5G40645 - RPM1-interacting protein 4 (RIN4) family protein protein-coding common peak17241 5 16342122 16343120 + TTS (AT5G40820.4) 2728 AT5G40810 AT5G40810 MHK7.4|MHK7_4 Cytochrome C1 family protein-coding common peak17242 5 16353558 16354206 + promoter-TSS (AT5G40820.4) 16 AT5G40820 ATR ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED|ATATR|ATRAD3|Ataxia telangiectasia-mutated and RAD3-related|MHK7.5|MHK7_5 Ataxia telangiectasia-mutated and RAD3-like protein protein-coding common peak17250 5 16396798 16397633 + intron (AT5G40910.9, intron 2 of 3) 1708 AT5G40910 AT5G40910 MHK7.14|MHK7_14 Disease resistance protein (TIR-NBS-LRR class) family protein-coding common peak17265 5 16480373 16480861 + promoter-TSS (AT5G41170.3) -33 AT5G41170 AT5G41170 MEE6.24|MEE6_24 Pentatricopeptide repeat (PPR-like) superfamily protein protein-coding common peak17270 5 16507234 16508001 + promoter-TSS (AT5G41265.1) -13 AT5G41265 AT5G41265 67758.TRNA-CYS-1 tRNA tRNA common peak17275 5 16537903 16538301 + promoter-TSS (AT5G41330.2) -86 AT5G41330 AT5G41330 MYC6.4|MYC6_4 BTB/POZ domain with WD40/YVTN repeat-like protein protein-coding common peak17280 5 16566923 16567710 + exon (AT5G41390.1, exon 7 of 7) 1218 AT5G41390 AT5G41390 MYC6.10|MYC6_10 PLAC8 family protein protein-coding common peak17285 5 16603088 16603854 + promoter-TSS (AT5G41500.1) -531 AT5G41500 AT5G41500 MPK23.3|MPK23_3 F-box and associated interaction domains-containing protein protein-coding common peak17299 5 16673952 16675659 + promoter-TSS (AT5G41700.5) 161 AT5G41690 AT5G41690 MBK23.23|MBK23_23 RNA-binding (RRM/RBD/RNP motifs) family protein protein-coding common peak17302 5 16693358 16694089 + promoter-TSS (AT5G41750.2) -109 AT5G41750 AT5G41750 MUF8.3|MUF8_3 Disease resistance protein (TIR-NBS-LRR class) family protein-coding VNsp peak17303 5 16695186 16696433 + exon (AT5G41750.2, exon 3 of 4) 1964 AT5G41750 AT5G41750 MUF8.3|MUF8_3 Disease resistance protein (TIR-NBS-LRR class) family protein-coding VNsp peak17313 5 16757699 16759322 + promoter-TSS (AT5G06245.1) -290 AT5G41850 AT5G41850 K16L22.14|K16L22_14 alpha/beta-Hydrolases superfamily protein protein-coding common peak17326 5 16810453 16811251 + promoter-TSS (AT5G42020.3) -159 AT5G42020 BIP2 BIP|MJC20.12|MJC20_12|luminal binding protein Heat shock protein 70 (Hsp 70) family protein protein-coding common peak17336 5 16856128 16856330 + promoter-TSS (AT5G42190.1) -488 AT5G42190 AT5G42190 ARABIDOPSIS SKP1-LIKE 2|ASK2|Arabidopsis SKP-like 2|MJC20.30|MJC20_30|SKP1B E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein protein-coding common peak17340 5 16877232 16877882 + exon (AT5G42220.1, exon 18 of 18) 1399 AT5G42223 AT5G42223 - Defensin-like (DEFL) family protein protein-coding common peak17346 5 16906531 16908091 + exon (AT5G42280.2, exon 2 of 3) 696 AT5G42280 AT5G42280 K5J14.8|K5J14_8 Cysteine/Histidine-rich C1 domain family protein protein-coding common peak17349 5 16926139 16927839 + TTS (AT5G42340.1) 381 AT5G42330 AT5G42330 MDH9.2|MDH9_2 hypothetical protein protein-coding common peak17352 5 16938338 16938732 + promoter-TSS (AT5G42360.1) -10 AT5G42360 AT5G42360 CFK2|COP9 SIGNALOSOME INTERACTING F-BOX KELCH 2|MDH9.5|MDH9_5 Galactose oxidase/kelch repeat superfamily protein protein-coding common peak17359 5 16987609 16988511 + TTS (AT5G42490.2) 2903 AT5G42480 ARC6 ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6|MDH9.18|MDH9_18 Chaperone DnaJ-domain superfamily protein protein-coding VNsp peak17363 5 17021369 17023400 + exon (AT5G42570.1, exon 1 of 2) 339 AT5G42570 AT5G42570 K16E1.4|K16E1_4 B-cell receptor-associated 31-like protein protein-coding common peak17382 5 17135109 17136738 + promoter-TSS (AT5G42740.3) -227 AT5G42740 AT5G42740 MJB21.12|MJB21_12 Sugar isomerase (SIS) family protein protein-coding common peak17385 5 17157675 17158945 + promoter-TSS (AT5G42785.1) -453 AT5G42785 AT5G42785 - transmembrane protein protein-coding common peak17400 5 17215634 17215950 + TTS (AT5G42940.1) -1572 AT5G42930 AT5G42930 MBD2.13|MBD2_13 alpha/beta-Hydrolases superfamily protein protein-coding common peak17413 5 17271724 17273064 + promoter-TSS (AT5G43060.1) -96 AT5G43060 RD21B MMG4.7|MMG4_7|esponsive to dehydration 21B Granulin repeat cysteine protease family protein protein-coding common peak17418 5 17291427 17291775 + Intergenic -1351 AT5G43080 CYCA3;1 Cyclin A3;1|MMG4.10|MMG4_10 Cyclin A3;1 protein-coding VNsp peak17421 5 17308773 17309032 + promoter-TSS (AT5G43110.1) -940 AT5G43110 PUM14 APUM14|MMG4.14|MMG4_14|pumilio 14 pumilio 14 protein-coding common peak17424 5 17320661 17321557 + promoter-TSS (AT5G43140.2) 76 AT5G43130 TAF4 MMG4.16|MMG4_16|TAF4B|TBP-associated factor 4|TBP-associated factor 4B TBP-associated factor 4 protein-coding common peak17430 5 17346518 17347865 + promoter-TSS (AT5G43210.1) -362 AT5G43200 AT5G43200 MNL12.2|MNL12_2 Zinc finger, C3HC4 type (RING finger) family protein protein-coding common peak17450 5 17459180 17461538 + intron (AT5G43460.1, intron 1 of 5) 486 AT5G43460 AT5G43460 MWF20.18|MWF20_18 HR-like lesion-inducing protein-like protein protein-coding common peak17451 5 17472532 17472709 + exon (AT5G43500.1, exon 14 of 18) -1429 AT5G43510 LURE1.2 AtLURE1.2|CRP810_1.2|LURE 1.2 Putative membrane lipoprotein protein-coding common peak17453 5 17488834 17490184 + TTS (AT5G43525.1) 238 AT5G43530 AT5G43530 K9D7.2|K9D7_2 Helicase protein with RING/U-box domain-containing protein protein-coding common peak17454 5 17495349 17495632 + TTS (AT5G43535.1) 121 AT5G43535 AT5G43535 67776.TRNA-GLY-1 tRNA tRNA common peak17455 5 17496859 17498209 + promoter-TSS (AT5G43550.1) -358 AT5G43550 AT5G43550 K9D7.5|K9D7_5 F-box associated ubiquitination effector family protein protein-coding common peak17457 5 17505071 17505346 + exon (AT5G43560.2, exon 12 of 12) -1192 AT5G43570 AT5G43570 K9D7.7|K9D7_7 Serine protease inhibitor, potato inhibitor I-type family protein protein-coding common peak17460 5 17522111 17524185 + exon (AT5G43620.1, exon 1 of 1) 662 AT5G43620 AT5G43620 K9D7.12|K9D7_12 Pre-mRNA cleavage complex II protein-coding common peak17477 5 17618646 17618970 + promoter-TSS (AT5G43822.1) 68 AT5G43822 AT5G43822 - Pentatricopeptide repeat (PPR) superfamily protein protein-coding common peak17500 5 17739224 17740443 + exon (AT5G44080.1, exon 1 of 1) 116 AT5G44080 AT5G44080 MRH10.19|MRH10_19 Basic-leucine zipper (bZIP) transcription factor family protein protein-coding common peak17506 5 17764906 17765722 + exon (AT5G44150.1, exon 1 of 5) 114 AT5G44150 AT5G44150 MLN1.7|MLN1_7 phosphorelay protein protein-coding common peak17510 5 17789181 17790623 + exon (AT5G44180.3, exon 18 of 18) 6730 AT5G44180 RLT2 MLN1.10|MLN1_10|RINGLET 2 Homeodomain-like transcriptional regulator protein-coding common peak17516 5 17815807 17817393 + promoter-TSS (AT5G44240.1) -304 AT5G44240 ALA2 MLN1.17|MLN1_17|aminophospholipid ATPase 2 aminophospholipid ATPase 2 protein-coding common peak17517 5 17825160 17826139 + exon (AT5G44250.1, exon 1 of 7) 113 AT5G44250 AT5G44250 MLN1.18|MLN1_18 peptidase, S9A/B/C family, catalytic domain protein (Protein of unknown function DUF829, transmembrane 53) protein-coding common peak17524 5 17877365 17877968 + promoter-TSS (AT5G44375.1) -8 AT5G44370 PHT4;6 K9L2.16|K9L2_16|phosphate transporter 4;6 phosphate transporter 4;6 protein-coding common peak17528 5 17892038 17892939 + exon (AT5G44410.1, exon 1 of 1) 579 AT5G44410 AT5G44410 MFC16.3|MFC16_3 FAD-binding Berberine family protein protein-coding common peak17549 5 17989426 17989989 + promoter-TSS (AT5G44600.1) -86 AT5G44600 AT5G44600 K15C23.4|K15C23_4 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein protein-coding common peak17559 5 18036104 18037735 + exon (AT5G44700.1, exon 1 of 2) 404 AT5G44700 GSO2 EDA23|EMBRYO SAC DEVELOPMENT ARREST 23|GASSHO 2|K23L20.3|K23L20_3 Leucine-rich repeat transmembrane protein kinase protein-coding common peak17561 5 18051657 18053010 + promoter-TSS (AT5G44750.2) -274 AT5G44750 REV1 ARABIDOPSIS THALIANA HOMOLOG OF REVERSIONLESS 1|ATREV1|K23L20.9|K23L20_9 DNA-directed DNA polymerase protein-coding common peak17567 5 18075999 18076239 + exon (AT5G44790.1, exon 9 of 9) -2990 AT5G44785 OSB3 organellar single-stranded DNA binding protein 3 organellar single-stranded DNA binding protein 3 protein-coding VNsp peak17573 5 18141121 18142192 + exon (AT5G44930.1, exon 1 of 5) 491 AT5G44930 ARAD2 ARABINAN DEFICIENT 2|ARABINOSYLTRANSFERASE|K21C13.11|K21C13_11 Exostosin family protein protein-coding common peak17577 5 18159754 18160600 + promoter-TSS (AT5G44980.1) -27 AT5G44980 AT5G44980 K21C13.17|K21C13_17 F-box/RNI-like/FBD-like domains-containing protein protein-coding common peak17596 5 18312478 18312675 + Intergenic -1130 AT5G45240 AT5G45240 K18C1.12|K18C1_12 Disease resistance protein (TIR-NBS-LRR class) protein-coding VNsp peak17600 5 18325764 18327151 + promoter-TSS (AT5G45250.1) 254 AT5G45260 RRS1 ARABIDOPSIS THALIANA WRKY DOMAIN PROTEIN 52|ATWRKY52|K9E15.2|K9E15_2|RESISTANT TO RALSTONIA SOLANACEARUM 1|SENSITIVE TO LOW HUMIDITY 1|SLH1 Disease resistance protein (TIR-NBS-LRR class) protein-coding common peak17619 5 18421007 18421726 + promoter-TSS (AT5G45472.4) -183 AT5G45472 AT5G45472 - ncRNA ncRNA common peak17623 5 18449536 18451124 + TTS (AT5G45510.1) 2807 AT5G45520 AT5G45520 MFC19.19|MFC19_19 Leucine-rich repeat (LRR) family protein protein-coding VNsp peak17628 5 18470231 18470960 + promoter-TSS (AT5G45570.2) -903 AT5G45570 AT5G45570 K2N11.2|K2N11_2 Ulp1 protease family protein protein-coding common peak17631 5 18495265 18495793 + TTS (AT5G45610.2) 4208 AT5G45610 SUV2 MRA19.1|MRA19_1|SENSITIVE TO UV 2 protein dimerization protein-coding common peak17632 5 18499438 18500035 + promoter-TSS (AT5G45610.2) 1 AT5G45610 SUV2 MRA19.1|MRA19_1|SENSITIVE TO UV 2 protein dimerization protein-coding common peak17646 5 18560539 18561015 + promoter-TSS (AT5G45760.1) -256 AT5G45760 AT5G45760 MRA19.19|MRA19_19 Transducin/WD40 repeat-like superfamily protein protein-coding common peak17663 5 18627515 18628293 + promoter-TSS (AT5G45930.1) -46 AT5G45930 CHLI2 CHL I2|CHL12|CHLI-2|K15I22.13|K15I22_13|MAGNESIUM CHELATASE I2|magnesium chelatase i2 magnesium chelatase i2 protein-coding common peak17668 5 18667523 18667739 + Intergenic -2035 AT5G46025 AT5G46025 - Ras-related small GTP-binding family protein protein-coding VNsp peak17669 5 18668556 18668772 + Intergenic -1387 AT5G46030 AT5G46030 MCL19.8|MCL19_8 transcription elongation factor-like protein protein-coding VNsp peak17670 5 18669904 18670586 + exon (AT5G46030.2, exon 1 of 5) 128 AT5G46030 AT5G46030 MCL19.8|MCL19_8 transcription elongation factor-like protein protein-coding common peak17676 5 18707037 18708926 + TTS (AT5G46150.3) -1273 AT5G46140 AT5G46140 MCL19.20|MCL19_20 hypothetical protein (DUF295) protein-coding VNsp peak17681 5 18725813 18726523 + promoter-TSS (AT5G46190.4) 72 AT5G46190 AT5G46190 MCL19.25|MCL19_25 RNA-binding KH domain-containing protein protein-coding common peak17682 5 18730101 18730600 + promoter-TSS (AT5G46200.1) -19 AT5G46200 AT5G46200 MDE13.2|MDE13_2 carboxyl-terminal proteinase-like protein (DUF239) protein-coding VNsp peak17687 5 18773375 18774957 + promoter-TSS (AT5G46280.2) -460 AT5G46280 MCM3 MINICHROMOSOME MAINTENANCE 3|MPL12.6|MPL12_6 Minichromosome maintenance (MCM2/3/5) family protein protein-coding common peak17688 5 18776424 18777041 + promoter-TSS (AT5G46290.3) 3 AT5G46290 KASI 3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I|3-ketoacyl-acyl carrier protein synthase I|KAS1|KETOACYL-ACP SYNTHASE 1|MPL12.7|MPL12_7 3-ketoacyl-acyl carrier protein synthase I protein-coding common peak17702 5 18819289 18819744 + promoter-TSS (AT5G46400.1) 239 AT5G46395 AT5G46395 - transmembrane protein protein-coding common peak17707 5 18842430 18843098 + TTS (AT5G46460.1) 211 AT5G46470 RPS6 K11I1.6|K11I1_6|RESISTANT TO P. SYRINGAE 6 disease resistance protein (TIR-NBS-LRR class) family protein-coding common peak17708 5 18848992 18849382 + intron (AT5G46470.1, intron 10 of 10) -1458 AT5G46490 AT5G46490 K11I1.8|K11I1_8 Disease resistance protein (TIR-NBS-LRR class) family protein-coding common peak17723 5 18951817 18952435 + TTS (AT5G46710.2) 1283 AT5G46700 TRN2 MZA15.11|MZA15_11|TET1|TETRASPANIN 1|TORNADO 2 Tetraspanin family protein protein-coding common peak17750 5 19068391 19068637 + promoter-TSS (AT5G46990.1) -222 AT5G46990 AT5G46990 MQD22.13|MQD22_13 Plant invertase/pectin methylesterase inhibitor superfamily protein protein-coding common peak17753 5 19079160 19080430 + TTS (AT5G47010.1) -1663 AT5G47020 AT5G47020 MQD22.16|MQD22_16 MraZ protein-coding common peak17787 5 19263424 19265048 + TTS (AT5G47480.1) 301 AT5G47490 AT5G47490 MNJ7.8|MNJ7_8 RGPR-like protein protein-coding common peak17802 5 19316823 19318418 + promoter-TSS (AT5G47690.4) -48 AT5G47690 AT5G47690 - binding protein protein-coding common peak17804 5 19337729 19338748 + promoter-TSS (AT5G47740.1) -273 AT5G47740 AT5G47740 MCA23.6|MCA23_6 Adenine nucleotide alpha hydrolases-like superfamily protein protein-coding common peak17809 5 19373741 19375551 + promoter-TSS (AT5G47830.1) 47 AT5G47830 AT5G47830 MCA23.17|MCA23_17 hypothetical protein protein-coding common peak17818 5 19427913 19429168 + promoter-TSS (AT5G47980.1) -348 AT5G47980 AT5G47980 MDN11.1 HXXXD-type acyl-transferase family protein protein-coding common peak17827 5 19464466 19465124 + TTS (AT5G48030.1) 176 AT5G48020 AT5G48020 MDN11.10|MDN11_10 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein protein-coding common peak17841 5 19531466 19531727 + TTS (AT5G48170.1) -1166 AT5G48160 OBE2 MIF21.5|MIF21_5|OBERON2 potyvirus VPg interacting protein (DUF1423) protein-coding common peak17855 5 19600224 19601620 + promoter-TSS (AT5G48370.2) -214 AT5G48370 AT5G48370 K23F3.9|K23F3_9 Thioesterase/thiol ester dehydrase-isomerase superfamily protein protein-coding common peak17881 5 19725736 19726636 + promoter-TSS (AT5G48650.1) -438 AT5G48640 AT5G48640 K15N18.11|K15N18_11 Cyclin family protein protein-coding common peak17884 5 19743758 19744483 + TTS (AT5G48680.1) 126 AT5G48675 AT5G48675 67812.TRNA-LYS-1 tRNA tRNA common peak17885 5 19745991 19746862 + promoter-TSS (AT5G48680.1) -234 AT5G48680 AT5G48680 K15N18.3|K15N18_3 Sterile alpha motif (SAM) domain-containing protein protein-coding common peak17895 5 19804292 19805769 + TTS (AT5G48850.1) 326 AT5G48840 PANC ARABIDOPSIS THALIANA PANTOTHENATE SYNTHETASE|ATPTS|K24G6.18|K24G6_18|PANTOTHENATE SYNTHETASE|PS|PTS|homolog of bacterial PANC pantoate-beta-alanine ligase protein-coding common peak17919 5 19937747 19938362 + TTS (AT5G49170.1) 1743 AT5G49170 AT5G49170 K21P3.4|K21P3_4 hypothetical protein protein-coding common peak17937 5 20034706 20035045 + TTS (AT5G49410.1) 1330 AT5G49420 AT5G49420 K7J8.9|K7J8_9 MADS-box transcription factor family protein protein-coding common peak17948 5 20088732 20090672 + promoter-TSS (AT5G49520.1) -946 AT5G49520 WRKY48 ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 48|ATWRKY48|K6M13.6|K6M13_6|WRKY DNA-binding protein 48 WRKY DNA-binding protein 48 protein-coding common peak17969 5 20191427 20192404 + promoter-TSS (AT5G49700.1) -244 AT5G49700 AT5G49700 AHL17|AT-hook motif nuclear localized protein 17|K2I5.6|K2I5_6 Putative AT-hook DNA-binding family protein protein-coding common peak17977 5 20249297 20249900 + promoter-TSS (AT5G49820.1) 24 AT5G49820 RUS6 EMBRYO DEFECTIVE 1879|K21G20.3|K21G20_3|ROOT UV-B SENSITIVE 6 root UVB sensitive protein (Protein of unknown function, DUF647) protein-coding common peak17978 5 20254532 20255888 + promoter-TSS (AT5G49840.3) 19 AT5G49840 AT5G49840 K21G20.5|K21G20_5 ATP-dependent Clp protease protein-coding common peak17979 5 20260574 20263247 + exon (AT5G49850.1, exon 3 of 6) 675 AT5G49850 AT5G49850 K21G20.6|K21G20_6 Mannose-binding lectin superfamily protein protein-coding common peak17982 5 20273987 20274467 + Intergenic -1332 AT5G49870 AT5G49870 K9P8.1|K9P8_1 Mannose-binding lectin superfamily protein protein-coding VNsp peak17983 5 20281977 20282555 + exon (AT5G49880.1, exon 1 of 16) 155 AT5G49880 MAD1 AtMAD1|K9P8.2|K9P8_2|NES1|NITRIC OXIDE-INDUCED EARLY COTYLEDON SENESCENCE 1|mitotic arrest deficient 1 mitotic checkpoint family protein protein-coding common peak17984 5 20287579 20288796 + TTS (AT5G49880.1) 4245 AT5G49890 CLC-C ATCLC-C|CHLORIDE CHANNEL C|K9P8.3|K9P8_3|chloride channel C chloride channel C protein-coding common peak17986 5 20296196 20297171 + TTS (AT5G49900.3) 3566 AT5G49900 AT5G49900 K9P8.4|K9P8_4 Beta-glucosidase, GBA2 type family protein protein-coding common peak17989 5 20312640 20313295 + promoter-TSS (AT5G49930.1) -75 AT5G49930 emb1441 K9P8.7|K9P8_7|embryo defective 1441 zinc knuckle (CCHC-type) family protein protein-coding common peak18001 5 20371423 20372302 + promoter-TSS (AT5G50100.1) 64 AT5G50100 AT5G50100 MPF21.11|MPF21_11 Putative thiol-disulfide oxidoreductase DCC protein-coding common peak18003 5 20374682 20375220 + intron (AT5G50110.2, intron 2 of 5) 1129 AT5G50110 AT5G50110 MPF21.12|MPF21_12 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein protein-coding common peak18014 5 20433223 20433823 + TTS (AT5G50190.1) 1020 AT5G50190 AT5G50190 K6A12.5|K6A12_5 ncRNA ncRNA common peak18024 5 20479007 20480107 + TTS (AT5G50310.1) 5100 AT5G50310 AT5G50310 MXI22.1|MXI22_1 Galactose oxidase/kelch repeat superfamily protein protein-coding common peak18033 5 20526642 20527016 + promoter-TSS (AT5G50400.1) -308 AT5G50400 PAP27 ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 27|ATPAP27|MXI22.12|MXI22_12|purple acid phosphatase 27 purple acid phosphatase 27 protein-coding common peak18041 5 20557261 20558656 + exon (AT5G50480.1, exon 1 of 1) 529 AT5G50480 NF-YC6 ''nuclear factor Y|MBA10.3|MBA10_3|nuclear factor Y|subunit C6|subunit C6'' nuclear factor Y, subunit C6 protein-coding common peak18056 5 20682783 20685079 + exon (AT5G50830.2, exon 1 of 3) 652 AT5G50830 AT5G50830 K7B16.5|K7B16_5 nuclear polyadenylated RNA-binding protein protein-coding common peak18071 5 20747839 20748144 + promoter-TSS (AT5G51020.1) -686 AT5G51020 CRL CAA33|CRUMPLED LEAF|K3K7.20|K3K7_20|constitutive activator of AAA-ATPase crumpled leaf protein-coding common peak18119 5 21000784 21001793 + promoter-TSS (AT5G51690.2) -234 AT5G51690 ACS12 1-amino-cyclopropane-1-carboxylate synthase 12|MIO24.18|MIO24_18 1-amino-cyclopropane-1-carboxylate synthase 12 protein-coding common peak18123 5 21016517 21017635 + promoter-TSS (AT5G07785.1) 54 AT5G51740 AT5G51740 MIO24.13|MIO24_13 Peptidase family M48 family protein protein-coding common peak18150 5 21161081 21161412 + promoter-TSS (ENSRNA049758176-T1) 3 AT5G52070 AT5G52070 MSG15.17|MSG15_17 Agenet domain-containing protein protein-coding common peak18151 5 21173681 21174381 + promoter-TSS (AT5G52110.1) -12 AT5G52110 HCF208 CCB2|COFACTOR ASSEMBLY OF COMPLEX C|HIGH CHLOROPHYLL FLUORESCENCE 208|MSG15.21|MSG15_21 chaperone (DUF2930) protein-coding common peak18161 5 21236436 21237282 + promoter-TSS (AT5G52300.2) -162 AT5G52300 LTI65 K24M7.3|K24M7_3|LOW-TEMPERATURE-INDUCED 65|RD29B|RESPONSIVE TO DESSICATION 29B CAP160 protein protein-coding common peak18164 5 21257811 21258516 + promoter-TSS (ENSRNA049492671-T1) -248 AT5G52355 AT5G52355 67839.TRNA-SER-1 tRNA tRNA common peak18177 5 21319469 21321023 + exon (AT5G52530.1, exon 4 of 4) 3106 AT5G52530 AT5G52530 T4M5.4|T4M5_4 dentin sialophosphoprotein-like protein protein-coding common peak18207 5 21472429 21472638 + TTS (AT5G52930.1) 430 AT5G52940 AT5G52940 MXC20.17|MXC20_17 hypothetical protein (DUF295) protein-coding common peak18211 5 21484979 21486183 + TTS (AT5G52990.1) 1662 AT5G52990 AT5G52990 MNB8.5|MNB8_5 SNARE-like superfamily protein protein-coding common peak18218 5 21514411 21515153 + promoter-TSS (AT5G53060.3) -114 AT5G53060 RCF3 MNB8.12|MNB8_12|SHI1|SHINY 1|regulator of CBF gene expression 3 RNA-binding KH domain-containing protein protein-coding common peak18223 5 21533802 21534928 + promoter-TSS (AT5G53120.4) -108 AT5G53120 SPDS3 ATSPDS3|MFH8.5|MFH8_5|SPERMIDINE SYNTHASE 3|SPMS|spermidine synthase 3 spermidine synthase 3 protein-coding common peak18226 5 21552010 21554011 + promoter-TSS (AT5G53150.6) -345 AT5G53150 AT5G53150 MFH8.9|MFH8_9 DnaJ heat shock amino-terminal domain protein protein-coding common peak18237 5 21595413 21596583 + promoter-TSS (AT5G53220.2) 4 AT5G53220 AT5G53220 K19E1.2|K19E1_2 hypothetical protein protein-coding common peak18246 5 21647369 21648234 + promoter-TSS (AT5G53360.1) -20 AT5G53360 AT5G53360 K19E1.16|K19E1_16 TRAF-like superfamily protein protein-coding common peak18250 5 21661093 21661665 + promoter-TSS (AT5G53400.1) -65 AT5G53400 BOB1 BOBBER1|MYN8.1|MYN8_1 HSP20-like chaperones superfamily protein protein-coding common peak18252 5 21667656 21668307 + promoter-TSS (AT5G53410.1) 42 AT5G53410 AT5G53410 MYN8.2|MYN8_2 F-box associated ubiquitination effector family protein protein-coding common peak18276 5 21785644 21785973 + TTS (AT5G53620.3) 1636 AT5G53635 AT5G53635 - F-box/RNI-like/FBD-like domains-containing protein protein-coding common peak18324 5 22022254 22025064 + exon (AT5G54240.1, exon 2 of 2) 999 AT5G54240 AT5G54240 MDK4.6|MDK4_6 membrane lipoprotein lipid attachment site-like protein, putative (DUF1223) protein-coding common peak18334 5 22074202 22075116 + promoter-TSS (AT5G54370.1) 253 AT5G54365 AT5G54365 67853.TRNA-PHE-1 tRNA tRNA common peak18338 5 22108883 22110113 + promoter-TSS (AT5G54450.1) -119 AT5G54450 AT5G54450 F24B18.7|F24B18_7 hypothetical protein (DUF295) protein-coding common peak18361 5 22195309 22198312 + TTS (AT5G54650.2) 523 AT5G54640 RAT5 ATHTA1|HTA1|MRB17.14|MRB17_14|RESISTANT TO AGROBACTERIUM TRANSFORMATION 5|histone H2A 1 Histone superfamily protein protein-coding common peak18373 5 22265489 22266847 + intron (AT5G54810.1, intron 1 of 4) 734 AT5G54810 TSB1 ATTSB1|MBG8.7|MBG8_7|TRP2|TRPB|TRYPTOPHAN BIOSYNTHESIS 2|TRYPTOPHAN BIOSYNTHESIS B|tryptophan synthase beta-subunit 1 tryptophan synthase beta-subunit 1 protein-coding common peak18375 5 22275256 22276010 + TTS (AT5G54840.2) 2644 AT5G54830 AT5G54830 MBG8.9|MBG8_9 DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein protein-coding common peak18377 5 22287668 22289288 + promoter-TSS (AT5G54870.1) -626 AT5G54870 AT5G54870 MBG8.14|MBG8_14 inositol-1,4,5-trisphosphate 5-phosphatase protein-coding common peak18387 5 22339783 22340560 + TTS (ENSRNA049492667-T1) 402 AT5G55055 AT5G55055 67859.TRNA-PHE-2 tRNA tRNA common peak18393 5 22366942 22367340 + promoter-TSS (AT5G55110.1) -592 AT5G55110 AT5G55110 MCO15.6|MCO15_6 Stigma-specific Stig1 family protein protein-coding common peak18405 5 22419157 22419915 + TTS (AT5G55260.1) 389 AT5G55270 AT5G55270 MCO15.22|MCO15_22 hypothetical protein (DUF295) protein-coding common peak18407 5 22428745 22429971 + TTS (AT5G55310.1) 137 AT5G55300 TOP1ALPHA DNA topoisomerase 1 beta|DNA topoisomerase I alpha|MGO1|MGOUN 1|MTE17.1|MTE17_1|TOP1|TOP1BETA|TOPOISOMERASE 1 DNA topoisomerase I alpha protein-coding common peak18417 5 22486253 22486808 + promoter-TSS (AT5G55507.1) 658 AT5G55508 AT5G55508 - hypothetical protein protein-coding VNsp peak18428 5 22564221 22565238 + promoter-TSS (AT5G55740.1) -142 AT5G55740 CRR21 MDF20.18|MDF20_18|chlororespiratory reduction 21 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding common peak18448 5 22669653 22671525 + promoter-TSS (AT5G55990.1) 403 AT5G55980 AT5G55980 MDA7.2|MDA7_2 serine-rich protein-like protein protein-coding common peak18473 5 22778851 22779788 + promoter-TSS (AT5G56270.1) -295 AT5G56270 WRKY2 ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 2|ATWRKY2|MXK23.1|MXK23_1|WRKY DNA-binding protein 2 WRKY DNA-binding protein 2 protein-coding common peak18478 5 22802076 22804787 + exon (AT5G56310.1, exon 1 of 1) 1132 AT5G56310 AT5G56310 MCD7.3|MCD7_3 Pentatricopeptide repeat (PPR) superfamily protein protein-coding common peak18523 5 23012447 23013514 + exon (AT5G56890.1, exon 11 of 14) 3035 AT5G56890 AT5G56890 - Protein kinase superfamily protein protein-coding VNsp peak18553 5 23148850 23150280 + promoter-TSS (AT5G57140.1) -315 AT5G57140 PAP28 ATPAP28|MUL3.9|MUL3_9|PURPLE ACID PHOSPHATASE 28|purple acid phosphatase 28 purple acid phosphatase 28 protein-coding common peak18560 5 23180704 23182314 + TTS (AT5G57200.1) 2411 AT5G57210 AT5G57210 MJB24.2|MJB24_2 Ypt/Rab-GAP domain of gyp1p superfamily protein protein-coding VNsp peak18569 5 23225600 23226453 + promoter-TSS (AT5G57340.2) 75 AT5G57340 AT5G57340 MJB24.15|MJB24_15 ras guanine nucleotide exchange factor Q-like protein protein-coding VNsp peak18572 5 23240142 23240617 + promoter-TSS (AT5G57360.1) -941 AT5G57360 ZTL ADAGIO 1|ADO1|FKF1-LIKE PROTEIN 2|FKL2|LKP1|LOV KELCH PROTEIN 1|MSF19.2|MSF19_2|ZEITLUPE Galactose oxidase/kelch repeat superfamily protein protein-coding common peak18575 5 23249111 23249503 + promoter-TSS (AT5G57380.2) 197 AT5G57380 VIN3 MSF19.4|MSF19_4|VERNALIZATION INSENSITIVE 3 Fibronectin type III domain-containing protein protein-coding common peak18587 5 23309569 23310740 + promoter-TSS (AT5G57565.1) -130 AT5G57565 AT5G57565 - Protein kinase superfamily protein protein-coding common peak18588 5 23312730 23314609 + promoter-TSS (AT5G57567.2) -749 AT5G57567 AT5G57567 - GCK domain protein protein-coding common peak18599 5 23362927 23363374 + intron (AT5G57670.2, intron 2 of 9) 689 AT5G57670 AT5G57670 - Protein kinase superfamily protein protein-coding common peak18602 5 23371581 23372447 + exon (AT5G57690.1, exon 10 of 10) 2662 AT5G57690 DGK4 ATDGK4|MRI1.5|MRI1_5|diacylglycerol kinase 4 diacylglycerol kinase 4 protein-coding common peak18603 5 23373060 23373314 + exon (AT5G57690.1, exon 5 of 10) 1489 AT5G57690 DGK4 ATDGK4|MRI1.5|MRI1_5|diacylglycerol kinase 4 diacylglycerol kinase 4 protein-coding common peak18616 5 23430715 23431595 + promoter-TSS (AT5G57830.1) 43 AT5G57830 AT5G57830 MTI20.7|MTI20_7 zein-binding protein (Protein of unknown function, DUF593) protein-coding common peak18638 5 23542827 23543741 + promoter-TSS (AT5G58180.2) 61 AT5G58170 SVL5 GDPDL7|Glycerophosphodiester phosphodiesterase (GDPD) like 7|MCK7.4|MCK7_4|SHV3-like 5 SHV3-like 5 protein-coding common peak18639 5 23546057 23546773 + promoter-TSS (AT5G58190.2) 42 AT5G58190 ECT10 MCK7.6|MCK7_6|evolutionarily conserved C-terminal region 10 evolutionarily conserved C-terminal region 10 protein-coding common peak18657 5 23654118 23655163 + promoter-TSS (AT5G58520.1) -18 AT5G58510 AT5G58510 MQJ2.13|MQJ2_13 Rab3 GTPase-activating protein catalytic protein protein-coding common peak18680 5 23773467 23774340 + promoter-TSS (AT5G58870.1) 70 AT5G58870 ftsh9 FTSH protease 9|K19M22.17|K19M22_17 FTSH protease 9 protein-coding common peak18681 5 23775640 23776492 + exon (AT5G58880.1, exon 1 of 4) 175 AT5G58880 AT5G58880 K19M22.8|K19M22_8 LRR protein protein-coding VNsp peak18685 5 23799679 23800407 + TTS (AT5G58950.1) 1786 AT5G58940 CRCK1 K19M22.13|K19M22_13|calmodulin-binding receptor-like cytoplasmic kinase 1 calmodulin-binding receptor-like cytoplasmic kinase 1 protein-coding VNsp peak18733 5 24024202 24025473 + Intergenic -6509 AT5G59650 AT5G59650 MTH12.9|MTH12_9 Leucine-rich repeat protein kinase family protein protein-coding VNsp peak18734 5 24030135 24030772 + promoter-TSS (AT5G59650.2) -893 AT5G59650 AT5G59650 MTH12.9|MTH12_9 Leucine-rich repeat protein kinase family protein protein-coding common peak18749 5 24108886 24109730 + promoter-TSS (AT5G08935.1) 216 AT5G59840 AT5G59840 MMN10.12|MMN10_12 Ras-related small GTP-binding family protein protein-coding common peak18751 5 24115982 24116653 + promoter-TSS (AT5G59870.1) -97 AT5G59870 HTA6 MMN10.22|MMN10_22|histone H2A 6 histone H2A 6 protein-coding common peak18753 5 24126239 24127535 + promoter-TSS (AT5G59900.1) 10 AT5G59910 HTB4 MMN10.15|MMN10_15 Histone superfamily protein protein-coding common peak18761 5 24188445 24190661 + TTS (AT5G60070.1) 212 AT5G60060 AT5G60060 MGO3.4|MGO3_4 F-box SKIP23-like protein (DUF295) protein-coding common peak18772 5 24248080 24248917 + promoter-TSS (AT5G60220.1) -422 AT5G60220 TET4 F15L12.11|F15L12_11|tetraspanin4 tetraspanin4 protein-coding common peak18774 5 24254152 24254509 + TTS (AT5G60260.1) 1955 AT5G60260 AT5G60260 F15L12.14|F15L12_14 hypothetical protein protein-coding common peak18777 5 24269876 24270510 + promoter-TSS (AT5G60320.1) -615 AT5G60320 AT5G60320 K9B18.1|K9B18_1|L-type lectin receptor kinase I.11|LecRK-I.11 Concanavalin A-like lectin protein kinase family protein protein-coding common peak18786 5 24307816 24308164 + TTS (AT5G60450.1) 2609 AT5G60440 AGL62 AGAMOUS-like 62|MUF9.24|MUF9_24 AGAMOUS-like 62 protein-coding common peak18790 5 24338549 24339935 + promoter-TSS (AT5G60540.1) 13 AT5G60550 GRIK2 ATSNAK1|MUF9.13|MUF9_13|geminivirus rep interacting kinase 2 geminivirus rep interacting kinase 2 protein-coding common peak18798 5 24381458 24382194 + promoter-TSS (AT5G60670.1) -227 AT5G60670 AT5G60670 MUP24.13|MUP24_13 Ribosomal protein L11 family protein protein-coding common peak18803 5 24410805 24411742 + exon (AT5G60710.1, exon 2 of 2) 3872 AT5G60710 AT5G60710 MUP24.2|MUP24_2 Zinc finger (C3HC4-type RING finger) family protein protein-coding VNsp peak18805 5 24424923 24425877 + TTS (AT5G60740.1) 2714 AT5G60730 AT5G60730 MUP24.8|MUP24_8 Anion-transporting ATPase protein-coding common peak18813 5 24469159 24470174 + exon (AT5G60820.1, exon 1 of 1) 105 AT5G60820 AT5G60820 MAE1.6|MAE1_6 RING/U-box superfamily protein protein-coding common peak18821 5 24514880 24516256 + exon (AT5G60930.2, exon 25 of 25) -1230 AT5G60920 COB COBRA|MSL3.40|MSL3_40 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family protein-coding common peak18826 5 24542667 24543158 + promoter-TSS (AT5G60980.1) -224 AT5G60980 AT5G60980 MSL3.12|MSL3_12 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein protein-coding common peak18827 5 24545501 24546105 + TTS (AT5G60990.1) 2221 AT5G60980 AT5G60980 MSL3.12|MSL3_12 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein protein-coding common peak18832 5 24568257 24568770 + intron (AT5G61060.2, intron 8 of 12) -1898 AT5G61050 AT5G61050 MAF19.6|MAF19_6 histone deacetylase-related / HD-like protein protein-coding VNsp peak18846 5 24645223 24645792 + promoter-TSS (AT5G61280.2) -517 AT5G61280 AT5G61280 MFB13.5|MFB13_5 Remorin family protein protein-coding common peak18855 5 24680424 24681110 + promoter-TSS (AT5G61400.1) 311 AT5G61390 AT5G61390 MFB13.17|MFB13_17|NAC45/86-DEPENDENT EXONUCLEASE-DOMAIN PROTEIN 2|NEN2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein protein-coding VNsp peak18864 5 24727621 24727848 + exon (AT5G61480.1, exon 1 of 2) 510 AT5G61480 PXY MCI2.4|MCI2_4|PHLOEM INTERCALATED WITH XYLEM|TDIF receptor|TDR Leucine-rich repeat protein kinase family protein protein-coding common peak18881 5 24817834 24818781 + TTS (AT5G61770.2) 2670 AT5G61770 PPAN MAC9.8|MAC9_8|PETER PAN-like protein PETER PAN-like protein protein-coding common peak18882 5 24819994 24820343 + Intergenic -1035 AT5G61780 Tudor2 Arabidopsis thaliana TUDOR-SN protein 2|AtTudor2|MAC9.14|MAC9_14|TSN2|TUDOR-SN protein 2 TUDOR-SN protein 2 protein-coding VNsp peak18907 5 24929266 24929540 + TTS (AT5G62070.1) 196 AT5G62065 AT5G62065 - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein protein-coding common peak18921 5 25001391 25002322 + TTS (AT5G62240.1) 2927 AT5G62240 AT5G62240 MMI9.7|MMI9_7 Cell cycle regulated microtubule associated protein protein-coding VNsp peak18922 5 25004464 25005500 + promoter-TSS (AT5G62250.2) -199 AT5G62240 AT5G62240 MMI9.7|MMI9_7 Cell cycle regulated microtubule associated protein protein-coding common peak18936 5 25075105 25076130 + exon (AT5G62460.2, exon 3 of 9) 762 AT5G62460 AT5G62460 K19B1.7|K19B1_7 RING/FYVE/PHD zinc finger superfamily protein protein-coding common peak18980 5 25365632 25366433 + promoter-TSS (AT5G63270.1) -20 AT5G63270 AT5G63270 MDC12.24|MDC12_24 RPM1-interacting protein 4 (RIN4) family protein protein-coding VNsp peak19072 5 25884829 25885988 + exon (AT5G64740.1, exon 12 of 13) 4375 AT5G64740 CESA6 E112|ISOXABEN RESISTANT 2|IXR2|MVP7.7|MVP7_7|PRC1|PROCUSTE 1|cellulose synthase 6 cellulose synthase 6 protein-coding VNsp peak19078 5 25903566 25904689 + exon (AT5G64790.1, exon 3 of 3) 1594 AT5G64790 AT5G64790 MXK3.1|MXK3_1 O-Glycosyl hydrolases family 17 protein protein-coding common peak19099 5 26030953 26032820 + TTS (AT5G65158.1) 1811 AT5G65158 PLAT3 PLAT domain protein 3 Lipase/lipooxygenase, PLAT/LH2 family protein protein-coding common peak19104 5 26052483 26053602 + promoter-TSS (AT5G65205.1) -325 AT5G65207 AT5G65207 - hypothetical protein protein-coding common peak19126 5 26168983 26170136 + promoter-TSS (AT5G65460.3) -368 AT5G65460 KAC2 KCA2|MNA5.20|MNA5_20|kinesin CDKA ;1 associated 2|kinesin like protein for actin based chloroplast movement 2 kinesin like protein for actin based chloroplast movement 2 protein-coding common peak19202 5 26551156 26552144 + promoter-TSS (AT5G66510.2) -14 AT5G66510 GAMMA CA3 K1F13.17|K1F13_17|gamma carbonic anhydrase 3 gamma carbonic anhydrase 3 protein-coding common peak19206 5 26566099 26567199 + promoter-TSS (ENSRNA049493796-T1) 125 AT5G66558 AT5G66558 - ncRNA ncRNA common peak19215 5 26620155 26621332 + promoter-TSS (AT5G66680.1) -39 AT5G66680 DGL1 DEFECTIVE GLYCOSYLATION|MSN2.7|MSN2_7 dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein protein-coding common peak19251 5 26852810 26853862 + promoter-TSS (AT5G67300.1) -686 AT5G67300 MYBR1 ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 44|ATMYB44|ATMYBR1|MYB44|myb domain protein r1 myb domain protein r1 protein-coding common peak19265 5 26938458 26939278 + promoter-TSS (AT5G67520.3) -291 AT5G67520 APK4 K9I9.8|K9I9_8|adenosine-5'-phosphosulfate (APS) kinase 4 adenosine-5'-phosphosulfate (APS) kinase 4 protein-coding common peak10178 3 11317286 11317666 + Intergenic 4039 ENSRNA049 VNsp peak10243 3 12121848 12122133 + Intergenic 1397 ENSRNA049 common peak10260 3 12400726 12401193 + Intergenic 14669 ENSRNA049 VNsp peak10316 3 13531366 13532449 + promoter-TSS (ENSRNA049494525-T1) -810 ENSRNA049 VNsp peak10317 3 13536415 13537656 + Intergenic 4318 ENSRNA049 VNsp peak10318 3 13543658 13544903 + Intergenic 11563 ENSRNA049 VNsp peak10319 3 13561548 13562106 + Intergenic 29110 ENSRNA049 common peak10320 3 13575350 13575903 + Intergenic -17443 ENSRNA049 VNsp peak10321 3 13586925 13587723 + Intergenic -5745 ENSRNA049 common peak10322 3 13588941 13590693 + Intergenic -3252 ENSRNA049 common peak10323 3 13591395 13592488 + Intergenic -1128 ENSRNA049 common peak10324 3 13705628 13706100 + promoter-TSS (ENSRNA049494468-T1) 187 ENSRNA049 common peak10325 3 13841017 13841447 + TTS (ENSRNA049493971-T1) 550 ENSRNA049 VNsp peak10326 3 13842707 13843569 + promoter-TSS (ENSRNA049494055-T1) -360 ENSRNA049 common peak10327 3 13879673 13880631 + Intergenic 9552 ENSRNA049 VNsp peak10342 3 14201021 14202398 + Intergenic 1951 ENSRNA049 common peak10344 3 14207879 14208911 + promoter-TSS (ENSRNA049494421-T1) 45 ENSRNA049 common peak10345 3 14218246 14218456 + promoter-TSS (ENSRNA049494262-T1) -69 ENSRNA049 common peak10346 3 14228003 14228439 + TTS (AT3G42050.1) -3370 ENSRNA049 common peak10378 3 14735255 14736210 + Intergenic -6689 ENSRNA049 VNsp peak10597 3 16781147 16782379 + promoter-TSS (ENSRNA049494539-T1) -54 ENSRNA049 VNsp peak10656 3 17149301 17150178 + promoter-TSS (AT3G46585.1) -13 ENSRNA049 common peak10970 3 18825702 18826830 + TTS (AT3G50670.2) 226 ENSRNA049 common peak11325 3 20642216 20642884 + promoter-TSS (ENSRNA049493684-T1) -318 ENSRNA049 common peak11343 3 20725528 20726320 + promoter-TSS (ENSRNA049493691-T1) -26 ENSRNA049 common peak12370 4 4295425 4295901 + Intergenic 4101 ENSRNA049 VNsp peak12377 4 4484055 4485140 + Intergenic 4730 ENSRNA049 VNsp peak12378 4 4497606 4497963 + Intergenic 17917 ENSRNA049 VNsp peak12379 4 4498407 4499151 + Intergenic 18912 ENSRNA049 VNsp peak12380 4 4499361 4499955 + Intergenic 19791 ENSRNA049 common peak12402 4 4919728 4920168 + Intergenic 30527 ENSRNA049 VNsp peak12403 4 4922285 4922625 + Intergenic 33034 ENSRNA049 VNsp peak12404 4 4923491 4923958 + Intergenic 34303 ENSRNA049 VNsp peak12413 4 5054097 5054340 + Intergenic -33732 ENSRNA049 common peak12710 4 7233968 7234708 + exon (AT4G12070.1, exon 5 of 5) -1467 ENSRNA049 common peak1283 1 7004010 7005411 + promoter-TSS (AT1G20200.1) 196 ENSRNA049 common peak14281 4 15803352 15805176 + promoter-TSS (AT4G32765.1) -285 ENSRNA049 common peak15497 5 3802215 3802974 + promoter-TSS (at5g01915) -120 ENSRNA049 VNsp peak16742 5 10943906 10945070 + TTS (at5g04915) 586 ENSRNA049 VNsp peak16750 5 11180158 11181704 + Intergenic -3865 ENSRNA049 common peak16751 5 11184898 11185111 + promoter-TSS (ENSRNA049493522-T1) 208 ENSRNA049 common peak16757 5 11304526 11305315 + Intergenic -4288 ENSRNA049 VNsp peak16758 5 11332538 11333553 + Intergenic -8455 ENSRNA049 VNsp peak16777 5 11664075 11664326 + Intergenic -3597 ENSRNA049 common peak16778 5 11701995 11705436 + Intergenic -13634 ENSRNA049 common peak16783 5 11821579 11822137 + Intergenic -16238 ENSRNA049 common peak16784 5 11962271 11962521 + Intergenic -13157 ENSRNA049 VNsp peak16785 5 12012269 12012904 + Intergenic -12389 ENSRNA049 common peak16786 5 12013139 12013402 + Intergenic -11705 ENSRNA049 common peak16867 5 13622503 13623445 + TTS (at5g05185) 558 ENSRNA049 VNsp peak17645 5 18558054 18559331 + promoter-TSS (ENSRNA049492640-T1) -153 ENSRNA049 common peak17692 5 18787191 18787866 + TTS (AT5G46320.1) 139 ENSRNA049 common peak1845 1 10151079 10151950 + TTS (ENSRNA049495720-T1) 258 ENSRNA049 common peak2012 1 11104012 11104771 + TTS (AT1G31110.1) 278 ENSRNA049 common peak2162 1 12013053 12014205 + Intergenic -2406 ENSRNA049 VNsp peak2438 1 16106241 16106499 + Intergenic -10202 ENSRNA049 VNsp peak2440 1 16114520 16115235 + Intergenic -1695 ENSRNA049 VNsp peak2945 1 19424298 19424898 + promoter-TSS (AT1G52160.1) 43 ENSRNA049 common peak4939 1 29923548 29924480 + promoter-TSS (AT1G79540.1) -364 ENSRNA049 VNsp peak5025 2 2411 3854 + promoter-TSS (ENSRNA049494572-T1) 327 ENSRNA049 common peak5368 2 2413057 2414494 + Intergenic -2427 ENSRNA049 VNsp peak5465 2 4215537 4216382 + Intergenic -2301 ENSRNA049 VNsp peak5482 2 4507611 4508620 + Intergenic 18824 ENSRNA049 VNsp peak5531 2 5214211 5215291 + Intergenic 1830 ENSRNA049 VNsp peak6376 2 10633912 10634928 + TTS (AT2G25010.1) 196 ENSRNA049 VNsp peak6737 2 12471652 12472446 + promoter-TSS (ENSRNA049492403-T1) -205 ENSRNA049 common peak84 1 515406 515955 + promoter-TSS (AT1G02475.1) 186 ENSRNA049 common peak8445 3 1656648 1657738 + promoter-TSS (AT3G01695.1) -565 ENSRNA049 common peak8535 3 2220876 2223494 + promoter-TSS (AT3G07020.3) -61 ENSRNA049 common peak9996 3 10169145 10169647 + exon (AT3G27473.4, exon 3 of 3) -1643 ENSRNA049 common