peakID Chr Start End Strand Detailed.Annotation Distance.to.TSS Nearest.PromoterID Gene.Name Gene.Alias Gene.Description Gene.Type peak.group peak2 1 14582 14840 + promoter-TSS (AT1G01030.1) -997 AT1G01030 NGA3 NGATHA3|T25K16.3|T25K16_3 AP2/B3-like transcriptional factor family protein protein-coding SNsp peak673 1 3890690 3891816 + TTS (AT1G11580.2) 719 AT1G04857 AT1G04857 - ncRNA ncRNA SNsp peak910 1 4993837 4995782 + promoter-TSS (AT1G05097.1) 65 AT1G05097 AT1G05097 - ncRNA ncRNA SNsp peak232 1 1480742 1481388 + Intergenic -1481 AT1G05140 AT1G05140 YUP8H12.25|YUP8H12_25 Peptidase M50 family protein protein-coding SNsp peak244 1 1549929 1550385 + TTS (AT1G05310.1) -2308 AT1G05300 ZIP5 YUP8H12.8|YUP8H12_8|zinc transporter 5 precursor zinc transporter 5 precursor protein-coding SNsp peak1358 1 7402228 7402477 + TTS (AT1G05633.1) 1007 AT1G05633 AT1G05633 - ncRNA ncRNA SNsp peak288 1 1845657 1846556 + promoter-TSS (AT1G06090.1) -595 AT1G06090 AT1G06090 T21E18.14|T21E18_14 Fatty acid desaturase family protein protein-coding SNsp peak1779 1 9794117 9794437 + promoter-TSS (AT1G06113.1) -267 AT1G06113 AT1G06113 - ncRNA ncRNA SNsp peak1814 1 9989899 9990984 + promoter-TSS (AT1G06157.1) -651 AT1G06157 AT1G06157 - ncRNA ncRNA SNsp peak2094 1 11599776 11600331 + Intergenic -1068 AT1G06533 AT1G06533 - ncRNA ncRNA SNsp peak2289 1 13045325 13046230 + Intergenic -2400 AT1G06897 AT1G06897 - ncRNA ncRNA SNsp peak3132 1 20484688 20485170 + TTS (AT1G54940.1) 220 AT1G08007 AT1G08007 - ncRNA ncRNA SNsp peak3413 1 22133682 22134285 + Intergenic 5112 AT1G08297 AT1G08297 - ncRNA ncRNA SNsp peak3589 1 23076595 23076979 + promoter-TSS (AT1G08523.1) -409 AT1G08523 AT1G08523 - ncRNA ncRNA SNsp peak3590 1 23078902 23079325 + Intergenic 1917 AT1G08523 AT1G08523 - ncRNA ncRNA SNsp peak3884 1 24576569 24577183 + promoter-TSS (AT1G66020.1) 129 AT1G08807 AT1G08807 - ncRNA ncRNA SNsp peak3966 1 24945364 24945994 + exon (AT1G66870.2, exon 3 of 3) 149 AT1G08853 AT1G08853 - ncRNA ncRNA SNsp peak4236 1 26307721 26308928 + exon (AT1G09123.1, exon 1 of 1) 175 AT1G09123 AT1G09123 - ncRNA ncRNA SNsp peak4350 1 26772174 26773502 + promoter-TSS (AT1G09207.1) 43 AT1G09207 AT1G09207 - ncRNA ncRNA SNsp peak4418 1 27072356 27073074 + promoter-TSS (AT1G09277.1) -516 AT1G09277 AT1G09277 - ncRNA ncRNA SNsp peak4601 1 28056048 28057192 + promoter-TSS (AT1G09507.1) 91 AT1G09507 AT1G09507 - ncRNA ncRNA SNsp peak4686 1 28486026 28488465 + TTS (AT1G09587.1) 1006 AT1G09587 AT1G09587 - ncRNA ncRNA SNsp peak4757 1 28884718 28885636 + TTS (AT1G76900.1) -1714 AT1G09683 AT1G09683 - ncRNA ncRNA SNsp peak703 1 4023639 4024469 + TTS (AT1G11915.1) 1059 AT1G11920 AT1G11920 F12F1.22|F12F1_22 Pectin lyase-like superfamily protein protein-coding SNsp peak704 1 4027552 4028903 + promoter-TSS (AT1G11930.2) -368 AT1G11930 AT1G11930 F12F1.20|F12F1_20 Putative pyridoxal phosphate-dependent enzyme, YBL036C type protein-coding SNsp peak713 1 4066212 4067344 + promoter-TSS (AT1G12030.1) -434 AT1G12030 AT1G12030 F12F1.10|F12F1_10 phosphoenolpyruvate carboxylase, putative (DUF506) protein-coding SNsp peak718 1 4095292 4095769 + exon (AT1G12100.1, exon 2 of 2) 284 AT1G12100 AT1G12100 F12F1.2|F12F1_2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein protein-coding SNsp peak735 1 4166685 4167934 + Intergenic -1381 AT1G12260 NAC007 ANAC007|EMB2749|EMBRYO DEFECTIVE 2749|NAC 007|T28K15.1|T28K15_1|VASCULAR RELATED NAC-DOMAIN PROTEIN 4|VND4 NAC 007 protein-coding SNsp peak754 1 4274172 4274592 + promoter-TSS (AT1G12550.1) -149 AT1G12550 HPR3 F5O11.29|F5O11_29|hydroxypyruvate reductase 3 D-isomer specific 2-hydroxyacid dehydrogenase family protein protein-coding SNsp peak755 1 4276097 4277033 + promoter-TSS (AT1G12560.1) 60 AT1G12560 EXPA7 ATEXP7|ATEXPA7|ATHEXP ALPHA 1.26|EXP7|F5O11.30|F5O11_30|expansin A7 expansin A7 protein-coding SNsp peak762 1 4309699 4310181 + TTS (AT1G12660.1) 997 AT1G12660 AT1G12660 T12C24.19|T12C24_19 thionin-like protein protein-coding SNsp peak761 1 4308244 4308683 + promoter-TSS (AT1G12660.1) -480 AT1G12660 AT1G12660 T12C24.19|T12C24_19 thionin-like protein protein-coding SNsp peak763 1 4313951 4316387 + Intergenic 2838 AT1G12665 AT1G12665 - thionin-like protein protein-coding SNsp peak838 1 4652598 4653593 + Intergenic -1546 AT1G13600 bZIP58 AtbZIP58|F21F23.3|basic leucine-zipper 58 basic leucine-zipper 58 protein-coding SNsp peak847 1 4701614 4702247 + TTS (AT1G13710.1) 2764 AT1G13710 CYP78A5 ''cytochrome P450|F21F23.15|F21F23_15|KLU|KLUH|cytochrome P450|family 78|polypeptide 5|polypeptide 5''|subfamily A cytochrome P450, family 78, subfamily A, polypeptide 5 protein-coding SNsp peak883 1 4868816 4869264 + exon (AT1G14250.1, exon 2 of 9) 694 AT1G14250 AT1G14250 - GDA1/CD39 nucleoside phosphatase family protein protein-coding SNsp peak893 1 4905279 4905977 + Intergenic -2259 AT1G14350 FLP AtMYB124|F14L17.12|F14L17_12|FOUR LIPS|MYB124|myb domain protein 124 Duplicated homeodomain-like superfamily protein protein-coding SNsp peak913 1 5005651 5007155 + Intergenic -2766 AT1G14600 AT1G14600 T5E21.10|T5E21_10 Homeodomain-like superfamily protein protein-coding SNsp peak917 1 5018528 5019356 + promoter-TSS (AT1G14630.1) -858 AT1G14630 AT1G14630 T5E21.19|T5E21_19 XRI1-like protein protein-coding SNsp peak977 1 5349061 5349863 + Intergenic -3120 AT1G15550 GA3OX1 ARABIDOPSIS THALIANA GIBBERELLIN 3 BETA-HYDROXYLASE 1|ATGA3OX1|GA REQUIRING 4|GA4|GIBBERELLIN 3 BETA-HYDROXYLASE|T16N11.6|T16N11_6|gibberellin 3-oxidase 1 gibberellin 3-oxidase 1 protein-coding SNsp peak978 1 5350063 5350264 + Intergenic -3821 AT1G15550 GA3OX1 ARABIDOPSIS THALIANA GIBBERELLIN 3 BETA-HYDROXYLASE 1|ATGA3OX1|GA REQUIRING 4|GA4|GIBBERELLIN 3 BETA-HYDROXYLASE|T16N11.6|T16N11_6|gibberellin 3-oxidase 1 gibberellin 3-oxidase 1 protein-coding SNsp peak984 1 5378642 5379293 + promoter-TSS (AT1G15640.1) 81 AT1G15640 AT1G15640 T16N11.15|T16N11_15 transmembrane protein protein-coding SNsp peak1134 1 6229280 6230478 + TTS (AT1G05383.1) 315 AT1G18100 E12A11 MFT|MOTHER OF FT AND TFL1|T10F20.11 PEBP (phosphatidylethanolamine-binding protein) family protein protein-coding SNsp peak1152 1 6333396 6334959 + TTS (AT1G18400.2) 2779 AT1G18400 BEE1 BR enhanced expression 1|F15H18.11|F15H18_11 BR enhanced expression 1 protein-coding SNsp peak1173 1 6453028 6453804 + TTS (AT1G18710.1) 2831 AT1G18710 MYB47 AtMYB47|F6A14.18|F6A14_18|myb domain protein 47 myb domain protein 47 protein-coding SNsp peak1180 1 6480177 6480574 + promoter-TSS (AT1G18790.1) -332 AT1G18790 RKD1 AtRKD1|F6A14.11|F6A14_11|RWP-RK domain containing 1|UAS-TAGGED ROOT PATTERNING5|URP5 RWP-RK domain-containing protein protein-coding SNsp peak1246 1 6841360 6842443 + Intergenic -1588 AT1G19790 SRS7 F14P1.22|F14P1_22|SHI-related sequence 7 SHI-related sequence 7 protein-coding SNsp peak1244 1 6838406 6838581 + exon (AT1G19790.2, exon 2 of 2) 1800 AT1G19790 SRS7 F14P1.22|F14P1_22|SHI-related sequence 7 SHI-related sequence 7 protein-coding SNsp peak1255 1 6878029 6878256 + Intergenic -4784 AT1G19840 AT1G19840 F6F9.11|F6F9_11|SAUR53|SMALL AUXIN UPREGULATED RNA 53 SAUR-like auxin-responsive protein family protein-coding SNsp peak1256 1 6882774 6884700 + Intergenic -2932 AT1G19850 MP ARF5|AUXIN RESPONSE FACTOR 5|F6F9.10|F6F9_10|IAA24|MONOPTEROS|TRANSCRIPTION FACTOR IAA24|indole-3-acetic acid inducible 24 Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein protein-coding SNsp peak1259 1 6903892 6905763 + promoter-TSS (AT1G19880.1) -136 AT1G19890 HTR10 ATMGH3|F6F9.5|F6F9_5|MALE-GAMETE-SPECIFIC HISTONE H3|male-gamete-specific histone H3 male-gamete-specific histone H3 protein-coding SNsp peak1261 1 6910840 6912026 + Intergenic -1568 AT1G19910 AVA-P2 ATVHA-C2|AVA-2PE|F6F9.3|F6F9_3|VACUOLAR H+-PUMPING ATPASE 16 KDA PROTEOLIPID|VACUOLAR-TYPE H+ ATPASE C2 ATPase, F0/V0 complex, subunit C protein protein-coding SNsp peak1302 1 7111354 7112571 + promoter-TSS (AT1G20540.1) -649 AT1G20540 AT1G20540 F5M15.14|F5M15_14 Transducin/WD40 repeat-like superfamily protein protein-coding SNsp peak1342 1 7333767 7334725 + Intergenic -2146 AT1G20990 AT1G20990 F9H16.2|F9H16_2 Cysteine/Histidine-rich C1 domain family protein protein-coding SNsp peak1355 1 7393382 7394285 + Intergenic -2230 AT1G21110 IGMT3 T22I11.6|T22I11_6|indole glucosinolate O-methyltransferase 3 O-methyltransferase family protein protein-coding SNsp peak1389 1 7537765 7538741 + Intergenic -3326 AT1G21520 AT1G21520 F24J8.16|F24J8_16 hypothetical protein protein-coding SNsp peak1425 1 7727752 7729493 + intron (AT1G21970.1, intron 1 of 1) 1027 AT1G21970 LEC1 AtLEC1|EMB 212|EMB212|EMBRYO DEFECTIVE 212|LEAFY COTYLEDON 1|NF-YB9|NUCLEAR FACTOR Y|SUBUNIT B9|T26F17.20|T26F17_20 Histone superfamily protein protein-coding SNsp peak1427 1 7733815 7734925 + promoter-TSS (AT1G21980.1) -291 AT1G21980 PIP5K1 ATPIP5K1|ATPIPK1|PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE|phosphatidylinositol-4-phosphate 5-kinase 1 phosphatidylinositol-4-phosphate 5-kinase 1 protein-coding SNsp peak1435 1 7784791 7785418 + promoter-TSS (AT1G22065.1) -604 AT1G22065 AT1G22065 - hypothetical protein protein-coding SNsp peak1518 1 8240879 8241065 + intron (AT1G23210.1, intron 1 of 3) 827 AT1G23210 GH9B6 AtGH9B6|F26F24.6|F26F24_6|glycosyl hydrolase 9B6 glycosyl hydrolase 9B6 protein-coding SNsp peak1521 1 8252711 8254462 + intron (AT1G23240.4, intron 2 of 4) 716 AT1G23240 AT1G23240 F26F24.33|F26F24_33 Caleosin-related family protein protein-coding SNsp peak1522 1 8255556 8255780 + intron (AT1G23250.2, intron 3 of 4) 762 AT1G23250 AT1G23250 F26F24.9|F26F24_9 Caleosin-related family protein protein-coding SNsp peak1562 1 8492901 8493907 + Intergenic 3162 AT1G24000 AT1G24000 T23E23.17|T23E23_17 Polyketide cyclase/dehydrase and lipid transport superfamily protein protein-coding SNsp peak1577 1 8572629 8573184 + promoter-TSS (AT1G24200.1) -529 AT1G24200 AT1G24200 F3I6.13|F3I6_13 Paired amphipathic helix (PAH2) superfamily protein protein-coding SNsp peak1683 1 9261247 9263311 + TTS (AT1G26770.1) -2125 AT1G26773 AT1G26773 - hypothetical protein protein-coding SNsp peak1684 1 9270115 9271085 + promoter-TSS (AT1G26780.2) -352 AT1G26780 MYB117 AtMYB117|LATERAL ORGAN FUSION 1|LOF1|T24P13.16|T24P13_16|myb domain protein 117 myb domain protein 117 protein-coding SNsp peak1788 1 9838373 9838590 + promoter-TSS (AT1G28160.1) -835 AT1G28160 AT1G28160 F3H9.18|F3H9_18 Integrase-type DNA-binding superfamily protein protein-coding SNsp peak1801 1 9910285 9911688 + Intergenic 2841 AT1G28310 AT1G28310 F3H9.4|F3H9_4 Dof-type zinc finger DNA-binding family protein protein-coding SNsp peak1847 1 10162654 10163970 + exon (AT1G29090.1, exon 2 of 2) 1140 AT1G29090 AT1G29090 F28N24.20|F28N24_20 Cysteine proteinases superfamily protein protein-coding SNsp peak1861 1 10237150 10237439 + exon (AT1G29280.1, exon 2 of 2) 957 AT1G29280 WRKY65 ATWRKY65|F28N24.4|F28N24_4|WRKY DNA-BINDING PROTEIN 65|WRKY DNA-binding protein 65 WRKY DNA-binding protein 65 protein-coding SNsp peak1863 1 10241419 10241916 + Intergenic -2786 AT1G29290 AT1G29290 F28N24.30|F28N24_30 B-cell lymphoma 6 protein protein-coding SNsp peak1914 1 10550162 10552539 + exon (AT1G30080.2, exon 3 of 3) 1945 AT1G30080 AT1G30080 T1P2.13|T1P2_13 Glycosyl hydrolase superfamily protein protein-coding SNsp peak1916 1 10560928 10562375 + promoter-TSS (AT1G30090.1) -106 AT1G30090 AT1G30090 T2H7.11|T2H7_11 Galactose oxidase/kelch repeat superfamily protein protein-coding SNsp peak1921 1 10595611 10596600 + promoter-TSS (AT1G30135.1) -247 AT1G30135 JAZ8 TIFY5A|jasmonate-zim-domain protein 8 jasmonate-zim-domain protein 8 protein-coding SNsp peak1982 1 10944324 10945000 + promoter-TSS (AT1G30814.4) 65 AT1G30814 AT1G30814 - hypothetical protein protein-coding SNsp peak2010 1 11081156 11082039 + Intergenic -2308 AT1G31050 AT1G31050 F17F8.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein protein-coding SNsp peak2008 1 11076275 11076977 + intron (AT1G31050.7, intron 3 of 7) 2614 AT1G31050 AT1G31050 F17F8.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein protein-coding SNsp peak2011 1 11083516 11085039 + promoter-TSS (AT1G31070.2) -389 AT1G31070 GlcNAc1pUT1 F17F8.1|GLCNA.UT1|N-acetylglucosamine-1-phosphate uridylyltransferase 1 N-acetylglucosamine-1-phosphate uridylyltransferase 1 protein-coding SNsp peak2065 1 11444780 11445541 + promoter-TSS (AT1G31880.1) -330 AT1G31880 BRX BREVIS RADIX|F5M6.11|F5M6_11|NIP3;1|NLM9|NOD26-like intrinsic protein 3;1 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein protein-coding SNsp peak2117 1 11730800 11731031 + Intergenic -7203 AT1G32460 AT1G32460 F5D14.24|F5D14_24 hypothetical protein protein-coding SNsp peak2160 1 12001932 12003507 + exon (AT1G33102.1, exon 1 of 1) 286 AT1G33102 AT1G33102 - hypothetical protein protein-coding SNsp peak2205 1 12304747 12304959 + promoter-TSS (AT1G33880.2) 58 AT1G33880 AT1G33880 T3M13.10|T3M13_10 Avirulence induced gene (AIG1) family protein protein-coding SNsp peak2255 1 12663191 12663768 + exon (AT1G34580.2, exon 3 of 3) 2960 AT1G34580 AT1G34580 F12K21.8|F12K21_8 Major facilitator superfamily protein protein-coding SNsp peak2464 1 16439698 16440048 + exon (AT1G43640.2, exon 5 of 5) 2042 AT1G43640 TLP5 AtTLP5|T10P12.9|T10P12_9|tubby like protein 5 tubby like protein 5 protein-coding SNsp peak2500 1 16762240 16763672 + promoter-TSS (AT1G44090.1) -470 AT1G44090 GA20OX5 ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 5|ATGA20OX5|T7O23.20|T7O23_20|gibberellin 20-oxidase 5 gibberellin 20-oxidase 5 protein-coding SNsp peak2554 1 17217894 17220451 + Intergenic -5548 AT1G46264 HSFB4 AT-HSFB4|F2G19.8|F2G19_8|SCHIZORIZA|SCZ|heat shock transcription factor B4|heat shock transcription factor B4 heat shock transcription factor B4 protein-coding SNsp peak2582 1 17378451 17379907 + promoter-TSS (AT1G47390.1) -365 AT1G47390 AT1G47390 T3F24.1|T3F24_1 F-box and associated interaction domains-containing protein protein-coding SNsp peak2589 1 17429995 17430659 + promoter-TSS (AT1G47495.1) -514 AT1G47495 AT1G47495 - hypothetical protein protein-coding SNsp peak2659 1 17882569 17882867 + intron (AT1G48400.1, intron 1 of 2) 1137 AT1G48400 AT1G48400 F11A17.5|F11A17_5 F-box/RNI-like/FBD-like domains-containing protein protein-coding SNsp peak2712 1 18233291 18234091 + promoter-TSS (AT1G49300.1) -11 AT1G49290 AT1G49290 F13F21.27|F13F21_27 Rho guanine nucleotide exchange factor protein-coding SNsp peak2711 1 18231737 18232596 + TTS (AT1G49290.1) 1514 AT1G49290 AT1G49290 F13F21.27|F13F21_27 Rho guanine nucleotide exchange factor protein-coding SNsp peak2715 1 18241796 18242202 + Intergenic -3502 AT1G49310 AT1G49310 F13F21.30|F13F21_30 transmembrane protein protein-coding SNsp peak2737 1 18347787 18348100 + exon (AT1G49570.1, exon 3 of 4) 985 AT1G49570 AT1G49570 F14J22.19|F14J22_19 Peroxidase superfamily protein protein-coding SNsp peak2753 1 18422406 18423149 + Intergenic -1801 AT1G49770 RGE1 F14J22.2|F14J22_2|RETARDED GROWTH OF EMBRYO 1|ZHOUPI|ZOU basic helix-loop-helix (bHLH) DNA-binding superfamily protein protein-coding SNsp peak2791 1 18604037 18605541 + promoter-TSS (AT1G50220.1) 37 AT1G50220 AT1G50220 F14I3.16|F14I3_16 B3 domain protein protein-coding SNsp peak2851 1 18910994 18911329 + promoter-TSS (AT1G51010.1) -228 AT1G51010 AT1G51010 F23H24.12|F23H24_12 hypothetical protein protein-coding SNsp peak2865 1 18972929 18974196 + Intergenic -3614 AT1G51190 PLT2 F11M15.6|F11M15_6|PLETHORA 2 Integrase-type DNA-binding superfamily protein protein-coding SNsp peak2866 1 18975959 18977136 + promoter-TSS (AT1G51190.1) -629 AT1G51190 PLT2 F11M15.6|F11M15_6|PLETHORA 2 Integrase-type DNA-binding superfamily protein protein-coding SNsp peak2869 1 18992200 18993212 + promoter-TSS (AT1G51220.1) -557 AT1G51220 WIP5 AtWIP5|F11M15.9|F11M15_9|WIP domain protein 5 WIP domain protein 5 protein-coding SNsp peak2872 1 19010409 19010904 + TTS (AT1G51270.1) -1517 AT1G51290 AT1G51290 F11M15.14|F11M15_14 F-box and associated interaction domains-containing protein protein-coding SNsp peak2934 1 19359016 19359735 + intron (AT1G52060.1, intron 3 of 3) 1447 AT1G52060 AT1G52060 F5F19.12|F5F19_12 Mannose-binding lectin superfamily protein protein-coding SNsp peak2946 1 19438863 19440348 + TTS (AT1G52190.1) 2119 AT1G52191 AT1G52191 - Thioesterase superfamily protein protein-coding SNsp peak2948 1 19448502 19449584 + Intergenic -5412 AT1G52200 AT1G52200 F9I5.19|F9I5_19 PLAC8 family protein protein-coding SNsp peak3010 1 19825417 19826586 + Intergenic -3602 AT1G53170 ERF8 ATERF-8|ATERF8|ERF TRANSCRIPTION FACTOR8|ETHYLENE RESPONSE ELEMENT BINDING FACTOR 4|F8L10.19|ethylene response factor 8 ethylene response factor 8 protein-coding SNsp peak3071 1 20140636 20141437 + promoter-TSS (AT1G53930.1) -149 AT1G53930 AT1G53930 T18A20.19 Ubiquitin-like superfamily protein protein-coding SNsp peak3073 1 20150288 20150705 + promoter-TSS (AT1G53990.1) -520 AT1G53990 GLIP3 F15I1.7|F15I1_7|GDSL-motif lipase 3 GDSL-motif lipase 3 protein-coding SNsp peak3163 1 20688832 20691685 + Intergenic 3781 AT1G55420 EDA11 T5A14.16|T5A14_16|embryo sac development arrest 11 Cysteine/Histidine-rich C1 domain family protein protein-coding SNsp peak3238 1 21056186 21056369 + promoter-TSS (AT1G56242.1) -124 AT1G56242 AT1G56242 - ncRNA ncRNA SNsp peak3290 1 21313742 21314516 + Intergenic -1210 AT1G57550 AT1G57550 F25P12.2|F25P12_2 Low temperature and salt responsive protein family protein-coding SNsp peak3309 1 21417577 21418404 + promoter-TSS (AT1G57820.2) -53 AT1G57820 VIM1 F12K22.14|F12K22_14|ORTH2|ORTHRUS 2|VARIANT IN METHYLATION 1 Zinc finger (C3HC4-type RING finger) family protein protein-coding SNsp peak3310 1 21423280 21423655 + TTS (AT1G57835.1) 1007 AT1G57835 AT1G57835 - ncRNA ncRNA SNsp peak3329 1 21534750 21536235 + promoter-TSS (AT1G58170.1) -403 AT1G58170 AT1G58170 T15M6.17 Disease resistance-responsive (dirigent-like protein) family protein protein-coding SNsp peak3350 1 21669654 21670337 + Intergenic -2366 AT1G58350 ZW18 F19C14.4|F19C14_4 Putative serine esterase family protein protein-coding SNsp peak3355 1 21704043 21704225 + exon (AT1G58410.4, exon 1 of 3) 121 AT1G58410 AT1G58410 F9K23.6|F9K23_6 Disease resistance protein (CC-NBS-LRR class) family protein-coding SNsp peak3378 1 21932019 21933598 + promoter-TSS (AT1G59675.1) -204 AT1G59680 EDA1 T30E16.27|T30E16_27|embryo sac development arrest 1 F-box associated ubiquitination effector family protein protein-coding SNsp peak3379 1 21936251 21936469 + promoter-TSS (AT1G59690.1) 82 AT1G59700 GSTU16 ATGSTU16|F23H11.1|F23H11_1|glutathione S-transferase TAU 16 glutathione S-transferase TAU 16 protein-coding SNsp peak3412 1 22124652 22125704 + Intergenic -1297 AT1G60050 UMAMIT35 T2K10.10|T2K10_10|Usually multiple acids move in and out Transporters 35 Nodulin MtN21 /EamA-like transporter family protein protein-coding SNsp peak3430 1 22254040 22254301 + promoter-TSS (AT1G60400.1) -235 AT1G60400 AT1G60400 T13D8.27|T13D8_27 F-box/RNI-like superfamily protein protein-coding SNsp peak3457 1 22374390 22375298 + promoter-TSS (AT1G60783.1) -65 AT1G60783 AT1G60783 - cyclin-dependent kinase inhibitor SMR2-like protein protein-coding SNsp peak3464 1 22419075 22419366 + Intergenic -1908 AT1G60890 AT1G60890 T7P1.4|T7P1_4 Phosphatidylinositol-4-phosphate 5-kinase family protein protein-coding SNsp peak3480 1 22522976 22523581 + promoter-TSS (AT1G08357.1) -357 AT1G61120 TPS04 F11P17.15|F11P17_15|GERANYLLINALOOL SYNTHASE|GES|TERPENE SYNTHASE 4|TPS4|terpene synthase 04 terpene synthase 04 protein-coding SNsp peak3481 1 22528727 22529465 + TTS (AT1G61120.1) 2731 AT1G61130 SCPL32 F11P17.14|F11P17_14|serine carboxypeptidase-like 32 serine carboxypeptidase-like 32 protein-coding SNsp peak3524 1 22745456 22746324 + TTS (AT1G61640.2) 1683 AT1G61630 ENT7 ATENT7|T25B24.2|T25B24_2|equilibrative nucleoside transporter 7 equilibrative nucleoside transporter 7 protein-coding SNsp peak3526 1 22758509 22758694 + Intergenic -2214 AT1G61660 AT1G61660 T13M11.1|T13M11_1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein protein-coding SNsp peak3539 1 22842493 22843418 + Intergenic -4292 AT1G61840 AT1G61840 F8K4.5|F8K4_5 Cysteine/Histidine-rich C1 domain family protein protein-coding SNsp peak3604 1 23154475 23154809 + exon (AT1G62540.2, exon 5 of 6) 2892 AT1G62540 FMO GS-OX2 T3P18.10|T3P18_10|flavin-monooxygenase glucosinolate S-oxygenase 2 flavin-monooxygenase glucosinolate S-oxygenase 2 protein-coding SNsp peak3606 1 23161680 23162116 + exon (AT1G62560.2, exon 6 of 6) 2164 AT1G62560 FMO GS-OX3 T3P18.12|T3P18_12|flavin-monooxygenase glucosinolate S-oxygenase 3 flavin-monooxygenase glucosinolate S-oxygenase 3 protein-coding SNsp peak3608 1 23170072 23170415 + intron (AT1G62570.1, intron 2 of 6) 1476 AT1G62570 FMO GS-OX4 T3P18.13|T3P18_13|flavin-monooxygenase glucosinolate S-oxygenase 4 flavin-monooxygenase glucosinolate S-oxygenase 4 protein-coding SNsp peak3614 1 23200597 23202023 + exon (AT1G62660.3, exon 2 of 6) 719 AT1G62660 AT1G62660 F23N19.3 Glycosyl hydrolases family 32 protein protein-coding SNsp peak3619 1 23225705 23226078 + intron (AT1G62710.1, intron 2 of 8) 1092 AT1G62710 BETA-VPE BETAVPE|F23N19.7|F23N19_7|beta vacuolar processing enzyme beta vacuolar processing enzyme protein-coding SNsp peak3625 1 23243611 23245921 + Intergenic 2183 AT1G62770 AT1G62770 F23N19.14|F23N19_14 Plant invertase/pectin methylesterase inhibitor superfamily protein protein-coding SNsp peak3641 1 23335022 23335657 + TTS (AT1G62981.3) 1699 AT1G62981 AT1G62981 - transmembrane protein, putative (DUF1191) protein-coding SNsp peak3642 1 23341070 23341382 + promoter-TSS (AT1G63000.1) -985 AT1G63000 NRS/ER ''UDP-4-KETO-6-DEOXY-D-GLUCOSE-3|5-EPIMERASE-4-REDUCTASE 1|5-EPIMERASE-4-REDUCTASE 1''|F16P17.17|F16P17_17|UDP-4-KETO-6-DEOXY-D-GLUCOSE-3|UER1|nucleotide-rhamnose synthase/epimerase-reductase nucleotide-rhamnose synthase/epimerase-reductase protein-coding SNsp peak3665 1 23460261 23460439 + exon (AT1G63245.1, exon 1 of 1) 534 AT1G63245 CLE14 CLAVATA3/ESR-RELATED 14 CLAVATA3/ESR-RELATED 14 protein-coding SNsp peak3686 1 23572175 23573170 + Intergenic -2591 AT1G63570 AT1G63570 F2K11.7|F2K11_7 Receptor-like protein kinase-related family protein protein-coding SNsp peak3769 1 24013277 24013878 + Intergenic -3066 AT1G64625 AT1G64625 LHL3|LL1|LONESOME HIGHWAY LIKE 3 Serine/threonine-protein kinase WNK (With No Lysine)-like protein protein-coding SNsp peak3839 1 24397570 24398247 + promoter-TSS (AT1G65620.2) -235 AT1G65620 AS2 ASYMMETRIC LEAVES 2|F5I14.15|F5I14_15 Lateral organ boundaries (LOB) domain family protein protein-coding SNsp peak3850 1 24453000 24453455 + promoter-TSS (AT1G65740.1) -16 AT1G65740 UCL1 F1E22.11|F1E22_11|UPWARD CURLY LEAF1 ascorbic acid mannose pathway regulator (DUF295) protein-coding SNsp peak3880 1 24566435 24566998 + intron (AT1G65985.1, intron 1 of 4) 1903 AT1G65985 AT1G65985 - transmembrane protein, putative (DUF247) protein-coding SNsp peak3892 1 24614366 24615741 + TTS (AT1G66120.1) 236 AT1G66130 AT1G66130 F15E12.2|F15E12_2 NAD(P)-binding Rossmann-fold superfamily protein protein-coding SNsp peak3899 1 24652261 24652463 + TTS (AT1G66190.1) 1636 AT1G66190 AT1G66190 F15E12.13|F15E12_13 hypothetical protein protein-coding SNsp peak3924 1 24752487 24753585 + promoter-TSS (AT1G66370.1) -553 AT1G66370 MYB113 AtMYB113|T27F4.12|T27F4_12|myb domain protein 113 myb domain protein 113 protein-coding SNsp peak3926 1 24758759 24760473 + TTS (AT1G66380.2) 1570 AT1G66380 MYB114 AtMYB114|T27F4.13|T27F4_13|myb domain protein 114 myb domain protein 114 protein-coding SNsp peak3925 1 24757719 24758017 + promoter-TSS (AT1G66380.3) -178 AT1G66380 MYB114 AtMYB114|T27F4.13|T27F4_13|myb domain protein 114 myb domain protein 114 protein-coding SNsp peak3957 1 24906054 24907488 + exon (AT1G66770.1, exon 1 of 1) 465 AT1G66770 SWEET6 AtSWEET6|F4N21.10|F4N21_10 Nodulin MtN3 family protein protein-coding SNsp peak3962 1 24925180 24925477 + intron (AT1G66800.1, intron 2 of 4) 554 AT1G66800 AT1G66800 F4N21.7|F4N21_7 NAD(P)-binding Rossmann-fold superfamily protein protein-coding SNsp peak3967 1 24947442 24947976 + promoter-TSS (AT1G66870.2) -741 AT1G66870 AT1G66870 F4N21.2|F4N21_2 Carbohydrate-binding X8 domain superfamily protein protein-coding SNsp peak4083 1 25577812 25579660 + TTS (AT1G68250.2) 1458 AT1G68250 AT1G68250 T22E19.12|T22E19_12 hypothetical protein protein-coding SNsp peak4085 1 25587302 25588204 + promoter-TSS (AT1G68260.1) -36 AT1G68260 AT1G68260 ALT3|T22E19.11|T22E19_11|acyl-lipid thioesterase 3 Thioesterase superfamily protein protein-coding SNsp peak4086 1 25592457 25593084 + exon (AT1G68280.1, exon 4 of 5) 870 AT1G68280 AT1G68280 ALT4|T22E19.9|T22E19_9|acyl-lipid thioesterase 4 Thioesterase superfamily protein protein-coding SNsp peak4094 1 25635141 25635387 + promoter-TSS (AT1G68370.1) -484 AT1G68370 ARG1 ALTERED RESPONSE TO GRAVITY 1|T22E19.25|T22E19_25 Chaperone DnaJ-domain superfamily protein protein-coding SNsp peak4109 1 25712480 25713442 + promoter-TSS (AT1G68526.1) -582 AT1G68526 AT1G68526 - hypothetical protein protein-coding SNsp peak4110 1 25715290 25716155 + promoter-TSS (AT1G68530.2) -698 AT1G68530 KCS6 3-ketoacyl-CoA synthase 6|AtCUT1|CER6|CUT1|CUTICULAR 1|ECERIFERUM 6|G2|POLLEN-PISTIL INCOMPATIBILITY 1|POP1|T26J14.10|T26J14_10 3-ketoacyl-CoA synthase 6 protein-coding SNsp peak4118 1 25763108 25764720 + TTS (AT1G68600.1) 455 AT1G68610 PCR11 F24J5.15|F24J5_15|PLANT CADMIUM RESISTANCE 11 PLANT CADMIUM RESISTANCE 11 protein-coding SNsp peak4139 1 25855130 25856242 + Intergenic -5408 AT1G68810 AT1G68810 ABNORMAL SHOOT 5|ABS5|T5L1|T6L1.1|T6L1_1|TMO5-LIKE1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein protein-coding SNsp peak4162 1 25977297 25977817 + exon (AT1G69090.1, exon 1 of 1) 1149 AT1G69090 AT1G69090 F4N2.7|F4N2_7 F-box protein (DUF295) protein-coding SNsp peak4165 1 25981849 25982048 + TTS (AT1G69100.2) 1949 AT1G69100 AT1G69100 F4N2.8|F4N2_8 Eukaryotic aspartyl protease family protein protein-coding SNsp peak4209 1 26181718 26181990 + promoter-TSS (AT1G69600.1) -302 AT1G69600 ZFHD1 ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 29|ATHB29|F24J1.29|F24J1_29|ZHD11|ZINC FINGER HOMEODOMAIN 11|zinc finger homeodomain 1|zinc finger homeodomain 1 zinc finger homeodomain 1 protein-coding SNsp peak4225 1 26255926 26256716 + Intergenic -2467 AT1G69780 ATHB13 HOMEODOMAIN LEUCINE-ZIPPER PROTEIN ATHB13|T6C23.2|T6C23_2 Homeobox-leucine zipper protein family protein-coding SNsp peak4228 1 26264405 26264920 + Intergenic -1930 AT1G69790 AT1G69790 T6C23.1|T6C23_1 Protein kinase superfamily protein protein-coding SNsp peak4267 1 26440331 26440876 + promoter-TSS (AT1G70209.1) -807 AT1G70209 AT1G70209 - hypothetical protein protein-coding SNsp peak4266 1 26438734 26440156 + promoter-TSS (AT1G70210.1) -111 AT1G70210 CYCD1;1 ATCYCD1;1|CYCLIN D1;1|F20P5.7|F20P5_7 CYCLIN D1;1 protein-coding SNsp peak4270 1 26453188 26453835 + intron (AT1G70250.1, intron 2 of 5) 664 AT1G70250 AT1G70250 F20P5.3|F20P5_3 receptor serine/threonine kinase protein-coding SNsp peak4273 1 26462866 26463847 + promoter-TSS (AT1G70270.2) -870 AT1G70270 AT1G70270 F17O7.20|F17O7_20 transcription factor protein-coding SNsp peak4288 1 26521362 26521845 + Intergenic 5742 AT1G70380 AT1G70380 F17O7.8|F17O7_8 F-box and associated interaction domains-containing protein protein-coding SNsp peak4338 1 26722389 26723057 + TTS (AT1G70880.1) -1160 AT1G70870 AT1G70870 F15H11.29|F15H11_29 Polyketide cyclase/dehydrase and lipid transport superfamily protein protein-coding SNsp peak4346 1 26751048 26751252 + Intergenic -1447 AT1G70950 AT1G70950 F15H11.15|F15H11_15 TPX2 (targeting protein for Xklp2) protein family protein-coding SNsp peak4349 1 26770258 26770713 + promoter-TSS (AT1G71000.1) -308 AT1G71000 AT1G71000 F15H11.19|F15H11_19 Chaperone DnaJ-domain superfamily protein protein-coding SNsp peak4414 1 27059841 27060562 + intron (AT1G71890.1, intron 2 of 2) -1260 AT1G71900 AT1G71900 F17M19.5|F17M19_5 magnesium transporter, putative (DUF803) protein-coding SNsp peak4656 1 28335128 28335445 + promoter-TSS (AT1G75490.1) -216 AT1G75490 AT1G75490 F1B16.21 Integrase-type DNA-binding superfamily protein protein-coding SNsp peak4676 1 28423021 28423919 + promoter-TSS (AT1G75690.1) -25 AT1G75700 HVA22G F10A5.11|F10A5_11|HVA22-like protein G HVA22-like protein G protein-coding SNsp peak4688 1 28493571 28494565 + exon (AT1G75890.1, exon 3 of 5) 259 AT1G75891 AT1G75891 - ncRNA ncRNA SNsp peak4851 1 29371330 29372388 + Intergenic -1944 AT1G78090 TPPB ATTPPB|Arabidopsis thaliana trehalose-6-phosphate phosphatase B|T11I11.2|T11I11_2|TREHALOSE-6-PHOSPHATE PHOSPHATASE|trehalose-6-phosphate phosphatase|trehalose-6-phosphate phosphatase B trehalose-6-phosphate phosphatase protein-coding SNsp peak4857 1 29412752 29413456 + promoter-TSS (AT1G78170.1) -770 AT1G78170 AT1G78170 T11I11.11|T11I11_11 E3 ubiquitin-protein ligase protein-coding SNsp peak5028 2 55248 55639 + promoter-TSS (AT2G01045.1) -975 AT2G01045 AT2G01045 - hypothetical protein protein-coding SNsp peak5095 2 336722 337455 + promoter-TSS (AT2G01770.1) -626 AT2G01770 VIT1 ATVIT1|T8O11.6|T8O11_6|vacuolar iron transporter 1 vacuolar iron transporter 1 protein-coding SNsp peak5094 2 335875 336196 + intron (AT2G01770.1, intron 1 of 3) 427 AT2G01770 VIT1 ATVIT1|T8O11.6|T8O11_6|vacuolar iron transporter 1 vacuolar iron transporter 1 protein-coding SNsp peak5097 2 346723 347787 + promoter-TSS (AT2G01810.1) -282 AT2G01810 AT2G01810 T8O11.2|T8O11_2 RING/FYVE/PHD zinc finger superfamily protein protein-coding SNsp peak5123 2 515557 515795 + Intergenic 6031 AT2G02080 IDD4 AtIDD4|F5O4.15|F5O4_15|indeterminate(ID)-domain 4 indeterminate(ID)-domain 4 protein-coding SNsp peak5138 2 605433 606857 + TTS (AT2G02290.1) 1692 AT2G02290 AT2G02290 T16F16.8|T16F16_8 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein protein-coding SNsp peak5139 2 610243 610572 + promoter-TSS (AT2G02310.1) -124 AT2G02310 PP2-B6 AtPP2-B6|T16F16.10|T16F16_10|phloem protein 2-B6 phloem protein 2-B6 protein-coding SNsp peak5147 2 650791 650989 + TTS (AT2G02450.1) -1674 AT2G02470 AL6 T16F16.26|T16F16_26|alfin-like 6 alfin-like 6 protein-coding SNsp peak5160 2 731605 732490 + promoter-TSS (AT2G02635.1) -244 AT2G02640 AT2G02640 T8K22.6|T8K22_6 Cysteine/Histidine-rich C1 domain family protein protein-coding SNsp peak5213 2 992675 992899 + promoter-TSS (AT2G03260.1) -455 AT2G03260 AT2G03260 T18E12.7|T18E12_7 EXS (ERD1/XPR1/SYG1) family protein protein-coding SNsp peak5216 2 1001475 1002281 + Intergenic 2344 AT2G03300 AT2G03300 T4M8.27|T4M8_27 Toll-Interleukin-Resistance (TIR) domain family protein protein-coding SNsp peak5152 2 679636 681736 + Intergenic -1971 AT2G04225 AT2G04225 - ncRNA ncRNA SNsp peak5248 2 1132355 1134069 + promoter-TSS (AT2G04565.1) -333 AT2G04565 AT2G04565 - ncRNA ncRNA SNsp peak5329 2 2015342 2015555 + promoter-TSS (AT2G05510.3) -176 AT2G05510 AT2G05510 T20G20.14|T20G20_14 Glycine-rich protein family protein-coding SNsp peak5775 2 7380862 7381202 + TTS (AT2G16980.1) 1433 AT2G06805 AT2G06805 - ncRNA ncRNA SNsp peak6386 2 10693226 10694759 + Intergenic -1600 AT2G08115 AT2G08115 - ncRNA ncRNA SNsp peak6714 2 12349786 12350321 + TTS (AT2G08295.1) 803 AT2G08295 AT2G08295 - ncRNA ncRNA SNsp peak7109 2 14393170 14393943 + exon (AT2G34080.1, exon 2 of 2) 146 AT2G08650 AT2G08650 - ncRNA ncRNA SNsp peak7402 2 15968744 15969879 + Intergenic 2128 AT2G08930 AT2G08930 - ncRNA ncRNA SNsp peak7401 2 15966341 15966930 + promoter-TSS (AT2G08930.1) -548 AT2G08930 AT2G08930 - ncRNA ncRNA SNsp peak7573 2 16819875 16821108 + TTS (AT2G09135.1) -1029 AT2G09130 AT2G09130 - ncRNA ncRNA SNsp peak7661 2 17242791 17243213 + Intergenic 2381 AT2G09255 AT2G09255 - ncRNA ncRNA SNsp peak7872 2 18349641 18350564 + promoter-TSS (AT2G09525.1) -706 AT2G09525 AT2G09525 - ncRNA ncRNA SNsp peak7960 2 18724276 18724752 + promoter-TSS (AT2G09620.1) 84 AT2G09620 AT2G09620 - ncRNA ncRNA SNsp peak5591 2 6018003 6018776 + promoter-TSS (AT2G14210.1) -169 AT2G14210 AGL44 AGAMOUS-like 44|ANR1|ARABIDOPSIS NITRATE REGULATED 1|F15N24.5|F15N24_5 AGAMOUS-like 44 protein-coding SNsp peak5615 2 6240411 6242117 + TTS (AT2G14610.1) 1277 AT2G14610 PR1 ATPR1|PATHOGENESIS-RELATED GENE 1|PATHOGENESIS-RELATED PROTEIN 1|PR 1|T6B13.15|T6B13_15|pathogenesis-related gene 1 pathogenesis-related protein 1 protein-coding SNsp peak5613 2 6236785 6237615 + Intergenic 5341 AT2G14610 PR1 ATPR1|PATHOGENESIS-RELATED GENE 1|PATHOGENESIS-RELATED PROTEIN 1|PR 1|T6B13.15|T6B13_15|pathogenesis-related gene 1 pathogenesis-related protein 1 protein-coding SNsp peak5614 2 6239452 6240024 + Intergenic 2803 AT2G14610 PR1 ATPR1|PATHOGENESIS-RELATED GENE 1|PATHOGENESIS-RELATED PROTEIN 1|PR 1|T6B13.15|T6B13_15|pathogenesis-related gene 1 pathogenesis-related protein 1 protein-coding SNsp peak5621 2 6287048 6287644 + promoter-TSS (AT2G14692.1) 57 AT2G14692 AT2G14692 - hypothetical protein protein-coding SNsp peak5665 2 6674777 6675569 + Intergenic -2052 AT2G15340 AT2G15340 F26H6.14|F26H6_14 glycine-rich protein protein-coding SNsp peak5667 2 6688074 6688782 + exon (AT2G15350.1, exon 2 of 2) 1391 AT2G15350 FUT10 ATFUT10|F26H6.13|F26H6_13|fucosyltransferase 10 fucosyltransferase 10 protein-coding SNsp peak5669 2 6697859 6698745 + exon (AT2G15370.1, exon 2 of 2) 1534 AT2G15370 FUT5 ARABIDOPSIS FUCOSYLTRANSFERASE 5|ATFUT5|F26H6.11|F26H6_11|fucosyltransferase 5 fucosyltransferase 5 protein-coding SNsp peak5776 2 7382110 7383307 + promoter-TSS (AT2G16990.7) -97 AT2G16990 AT2G16990 F6P23.2|F6P23_2 Major facilitator superfamily protein protein-coding SNsp peak5777 2 7387526 7387936 + exon (AT2G16990.7, exon 13 of 13) 4374 AT2G17000 AT2G17000 F6P23.16|F6P23_16 Mechanosensitive ion channel family protein protein-coding SNsp peak5787 2 7436353 7437919 + exon (AT2G17090.1, exon 1 of 9) 178 AT2G17090 SSP BSK12|F6P23.23|F6P23_23|SHORT SUSPENSOR|brassinosteroid-signaling kinase 12 kinase with tetratricopeptide repeat domain-containing protein protein-coding SNsp peak5816 2 7589084 7589408 + Intergenic -1119 AT2G17470 ALMT6 ALuminium activated Malate Transporter 6|AtALMT6|F5J6.5 aluminum activated malate transporter family protein protein-coding SNsp peak5851 2 7811192 7812030 + promoter-TSS (AT2G17950.1) -800 AT2G17950 WUS PGA6|T27K22.18|T27K22_18|WUS1|WUSCHEL|WUSCHEL 1 Homeodomain-like superfamily protein protein-coding SNsp peak5898 2 8053733 8055425 + Intergenic -3263 AT2G18550 HB21 ATHB21|F24H14.10|F24H14_10|HB-2|homeobox protein 21|homeobox-2 homeobox protein 21 protein-coding SNsp peak5901 2 8068764 8069159 + promoter-TSS (AT2G18590.1) -984 AT2G18590 AT2G18590 F24H14.6|F24H14_6 Major facilitator superfamily protein protein-coding SNsp peak5919 2 8150756 8151316 + Intergenic -1567 AT2G18810 AT2G18810 MSF3.19|MSF3_19 B3 domain protein (DUF313) protein-coding SNsp peak5918 2 8150196 8150381 + promoter-TSS (AT2G18810.1) -819 AT2G18810 AT2G18810 MSF3.19|MSF3_19 B3 domain protein (DUF313) protein-coding SNsp peak6023 2 8675035 8676313 + Intergenic -2286 AT2G20100 AT2G20100 T2G17.10|T2G17_10 basic helix-loop-helix (bHLH) DNA-binding superfamily protein protein-coding SNsp peak6061 2 8892398 8893253 + intron (AT2G20620.1, intron 2 of 5) 419 AT2G20620 AT2G20620 F23N11.6|F23N11_6 hypothetical protein (DUF626) protein-coding SNsp peak6087 2 9026941 9029138 + TTS (AT2G21040.1) 309 AT2G21045 AT2G21045 - Rhodanese/Cell cycle control phosphatase superfamily protein protein-coding SNsp peak6121 2 9245583 9246506 + exon (AT2G21610.1, exon 3 of 5) 981 AT2G21610 PE11 A. THALIANA PECTINESTERASE 11|ATPE11|F2G1.12|F2G1_12|pectinesterase 11 pectinesterase 11 protein-coding SNsp peak6153 2 9420805 9421351 + TTS (AT2G22145.1) 838 AT2G22145 AT2G22145 - ECA1 gametogenesis related family protein protein-coding SNsp peak6189 2 9596223 9597041 + exon (AT2G22600.1, exon 1 of 7) 106 AT2G22600 AT2G22600 T9I22.4|T9I22_4 RNA-binding KH domain-containing protein protein-coding SNsp peak6204 2 9673989 9675012 + TTS (AT2G22750.4) 2356 AT2G22750 AT2G22750 T30L20.1|T30L20_1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein protein-coding SNsp peak6208 2 9681773 9682273 + Intergenic -2539 AT2G22770 NAI1 T30L20.3|T30L20_3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein protein-coding SNsp peak6212 2 9709814 9710818 + Intergenic -1948 AT2G22805 AT2G22805 - Defensin-like (DEFL) family protein protein-coding SNsp peak6214 2 9720598 9721392 + promoter-TSS (AT2G22821.1) -137 AT2G22821 AT2G22821 - ncRNA ncRNA SNsp peak6221 2 9754717 9755531 + exon (AT2G22920.4, exon 5 of 13) 1186 AT2G22920 SCPL12 T20K9.13|T20K9_13|serine carboxypeptidase-like 12 serine carboxypeptidase-like 12 protein-coding SNsp peak6222 2 9756489 9757011 + intron (AT2G22920.2, intron 11 of 13) 2812 AT2G22920 SCPL12 T20K9.13|T20K9_13|serine carboxypeptidase-like 12 serine carboxypeptidase-like 12 protein-coding SNsp peak6265 2 9979432 9979785 + exon (AT2G23440.1, exon 1 of 1) 203 AT2G23440 AT2G23440 F26B6.9|F26B6_9 transmembrane protein protein-coding SNsp peak6290 2 10155695 10156959 + promoter-TSS (AT2G23840.1) -628 AT2G23840 AT2G23840 T29E15.4|T29E15_4 HNH endonuclease protein-coding SNsp peak6316 2 10319116 10320438 + exon (AT2G24260.1, exon 6 of 6) 2080 AT2G24260 LRL1 F27D4.17|F27D4_17|LJRHL1-like 1 LJRHL1-like 1 protein-coding SNsp peak6317 2 10324590 10324943 + Intergenic -2343 AT2G24260 LRL1 F27D4.17|F27D4_17|LJRHL1-like 1 LJRHL1-like 1 protein-coding SNsp peak6328 2 10390721 10391082 + promoter-TSS (AT2G24440.1) -174 AT2G24440 AT2G24440 T28I24.17|T28I24_17 selenium binding protein protein-coding SNsp peak6360 2 10556138 10556497 + Intergenic -2856 AT2G24762 GDU4 AtGDU4|glutamine dumper 4 glutamine dumper 4 protein-coding SNsp peak6388 2 10701988 10703014 + promoter-TSS (AT2G25140.1) -298 AT2G25140 CLPB4 CASEIN LYTIC PROTEINASE B-M|CLPB-M|F13D4.100|F13D4_100|HEAT SHOCK PROTEIN 98.7|HSP98.7|casein lytic proteinase B4 casein lytic proteinase B4 protein-coding SNsp peak6418 2 10841819 10842102 + promoter-TSS (AT2G25480.2) -903 AT2G25480 AT2G25480 F13B15.14|F13B15_14 TPX2 (targeting protein for Xklp2) protein family protein-coding SNsp peak6442 2 10992596 10993383 + exon (AT2G25770.1, exon 2 of 2) 209 AT2G25770 AT2G25770 F17H15.20|F17H15_20 Polyketide cyclase/dehydrase and lipid transport superfamily protein protein-coding SNsp peak6447 2 11013122 11014681 + promoter-TSS (AT2G25820.1) -888 AT2G25820 ESE2 F17H15.15|F17H15_15|ethylene and salt inducible 2 Integrase-type DNA-binding superfamily protein protein-coding SNsp peak6461 2 11085372 11086509 + TTS (AT2G26000.1) -1340 AT2G26010 PDF1.3 T19L18.18|T19L18_18|plant defensin 1.3 plant defensin 1.3 protein-coding SNsp peak6463 2 11093943 11094503 + promoter-TSS (AT2G26030.2) -779 AT2G26030 AT2G26030 T19L18.16|T19L18_16 F-box/RNI-like/FBD-like domains-containing protein protein-coding SNsp peak6475 2 11138529 11138852 + TTS (AT2G26150.1) 761 AT2G26160 AT2G26160 T19L18.3|T19L18_3 F-box SKIP23-like protein (DUF295) protein-coding SNsp peak6481 2 11174919 11175104 + Intergenic -1733 AT2G26250 KCS10 3-ketoacyl-CoA synthase 10|FDH|FIDDLEHEAD|T1D16.11|T1D16_11 3-ketoacyl-CoA synthase 10 protein-coding SNsp peak6486 2 11194656 11195987 + promoter-TSS (AT2G26290.1) -890 AT2G26290 ARSK1 T1D16.7|T1D16_7|root-specific kinase 1 root-specific kinase 1 protein-coding SNsp peak6514 2 11306763 11306980 + exon (AT2G26580.1, exon 1 of 7) 115 AT2G26580 YAB5 T9J22.25|T9J22_25|YABBY5 plant-specific transcription factor YABBY family protein protein-coding SNsp peak6527 2 11373830 11375103 + Intergenic 5992 AT2G26700 PID2 F18A8.7|F18A8_7|PINOID2 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein protein-coding SNsp peak6529 2 11382426 11383213 + intron (AT2G26710.1, intron 3 of 3) -1963 AT2G26720 AT2G26720 F18A8.9|F18A8_9 Cupredoxin superfamily protein protein-coding SNsp peak6541 2 11457858 11459190 + intron (AT2G26870.1, intron 1 of 2) 957 AT2G26870 NPC2 F12C20.9|F12C20_9|non-specific phospholipase C2 non-specific phospholipase C2 protein-coding SNsp peak6601 2 11806722 11807323 + promoter-TSS (AT2G27680.1) -935 AT2G27680 AT2G27680 - NAD(P)-linked oxidoreductase superfamily protein protein-coding SNsp peak6609 2 11846471 11846981 + promoter-TSS (AT2G27780.1) -148 AT2G27780 AT2G27780 F15K20.12|F15K20_12 Transcription factor IIS family protein protein-coding SNsp peak6622 2 11905890 11906701 + Intergenic -2233 AT2G27950 AT2G27950 T1E2.13|T1E2_13 Ring/U-Box superfamily protein protein-coding SNsp peak6635 2 11968004 11968424 + exon (AT2G28085.1, exon 1 of 1) 498 AT2G28085 AT2G28085 SAUR42|SMALL AUXIN UPREGULATED RNA 42 SAUR-like auxin-responsive protein family protein-coding SNsp peak6646 2 12033287 12034572 + promoter-TSS (AT2G28220.1) -69 AT2G28220 AT2G28220 T3B23.11|T3B23_11 aspartic proteinase CDR1-like protein protein-coding SNsp peak6686 2 12228523 12230168 + promoter-TSS (AT2G28550.4) -721 AT2G28550 RAP2.7 T17D12.11|T17D12_11|TARGET OF EARLY ACTIVATION TAGGED (EAT) 1|TOE1|related to AP2.7 related to AP2.7 protein-coding SNsp peak6694 2 12256699 12257059 + TTS (AT2G28605.1) 1991 AT2G28605 AT2G28605 T8O18.1|T8O18_1 Photosystem II reaction center PsbP family protein protein-coding SNsp peak6706 2 12311633 12311958 + Intergenic -3152 AT2G28690 AT2G28690 T8O18.2|T8O18_2 TOX high mobility group box protein, putative (DUF1635) protein-coding SNsp peak6707 2 12312815 12312987 + Intergenic -4258 AT2G28690 AT2G28690 T8O18.2|T8O18_2 TOX high mobility group box protein, putative (DUF1635) protein-coding SNsp peak6725 2 12386384 12387129 + Intergenic -1705 AT2G28850 CYP710A3 F8N16.14|F8N16_14|cytochrome P450|family 710|polypeptide 3|subfamily A cytochrome P450, family 710, subfamily A, polypeptide 3 protein-coding SNsp peak6726 2 12388112 12388594 + exon (AT2G28860.1, exon 1 of 1) 1538 AT2G28860 CYP710A4 F8N16.15|F8N16_15|cytochrome P450|family 710|polypeptide 4|subfamily A cytochrome P450, family 710, subfamily A, polypeptide 4 protein-coding SNsp peak6775 2 12678999 12679183 + exon (AT2G29660.1, exon 1 of 1) 201 AT2G29660 AT2G29660 T27A16.24|T27A16_24 zinc finger (C2H2 type) family protein protein-coding SNsp peak6809 2 12840195 12841432 + promoter-TSS (AT2G30080.1) -561 AT2G30080 ZIP6 ATZIP6|T27E13.18|T27E13_18 ZIP metal ion transporter family protein-coding SNsp peak6859 2 13062589 13063851 + Intergenic -1545 AT2G30660 AT2G30660 T11J7.5|T11J7_5 ATP-dependent caseinolytic (Clp) protease/crotonase family protein protein-coding SNsp peak6858 2 13061122 13061503 + exon (AT2G30660.1, exon 3 of 13) 300 AT2G30660 AT2G30660 T11J7.5|T11J7_5 ATP-dependent caseinolytic (Clp) protease/crotonase family protein protein-coding SNsp peak6868 2 13109335 13111079 + exon (AT2G30766.2, exon 3 of 3) 1781 AT2G30770 CYP71A13 T11J7.16|T11J7_16|cytochrome P450|family 71|polypeptide 13|subfamily A cytochrome P450 family 71 polypeptide protein-coding SNsp peak6888 2 13243518 13245056 + Intergenic 2942 AT2G31082 CLE7 CLAVATA3/ESR-RELATED 7 CLAVATA3/ESR-RELATED 7 protein-coding SNsp peak6889 2 13246840 13247655 + Intergenic -4829 AT2G31083 CLE5 AtCLE5|CLAVATA3/ESR-RELATED 5 CLAVATA3/ESR-RELATED 5 protein-coding SNsp peak6984 2 13735963 13736838 + TTS (AT2G32360.1) 1146 AT2G32360 AT2G32360 T32F6.12|T32F6_12 Ubiquitin-like superfamily protein protein-coding SNsp peak7030 2 14004917 14005159 + intron (AT2G32990.1, intron 3 of 3) -1097 AT2G33000 AT2G33000 T21L14.6|T21L14_6 ubiquitin-associated (UBA)/TS-N domain-containing protein-like protein protein-coding SNsp peak7101 2 14364610 14366024 + exon (AT2G34000.1, exon 1 of 1) 386 AT2G34000 AT2G34000 T14G11.12|T14G11_12 RING/U-box superfamily protein protein-coding SNsp peak7240 2 15084504 15085289 + promoter-TSS (AT2G35930.1) -337 AT2G35930 PUB23 AtPUB23|F11F19.16|F11F19_16|plant U-box 23 plant U-box 23 protein-coding SNsp peak7241 2 15086233 15086716 + Intergenic -1915 AT2G35930 PUB23 AtPUB23|F11F19.16|F11F19_16|plant U-box 23 plant U-box 23 protein-coding SNsp peak7251 2 15127768 15127974 + promoter-TSS (AT2G36030.1) -100 AT2G36030 AT2G36030 F11F19.6|F11F19_6 hypothetical protein protein-coding SNsp peak7268 2 15203214 15203808 + exon (AT2G36260.1, exon 3 of 3) 865 AT2G36260 AT2G36260 F2H17.13|F2H17_13 Iron-sulfur cluster biosynthesis family protein protein-coding SNsp peak7275 2 15232178 15232502 + exon (AT2G36325.1, exon 3 of 5) 994 AT2G36325 AT2G36325 - GDSL-like Lipase/Acylhydrolase superfamily protein protein-coding SNsp peak7298 2 15372746 15373482 + Intergenic -2081 AT2G36680 AT2G36680 F13K3.8|F13K3_8|VPS37-2 Modifier of rudimentary (Mod(r)) protein protein-coding SNsp peak7320 2 15496989 15497876 + Intergenic -4294 AT2G36910 ABCB1 ARABIDOPSIS THALIANA P GLYCOPROTEIN1|ATP binding cassette subfamily B1|ATP-binding cassette B1|ATPGP1|P-GLYCOPROTEIN 1|PGP1|T1J8.9|T1J8_9 ATP binding cassette subfamily B1 protein-coding SNsp peak7321 2 15498254 15498974 + Intergenic -3112 AT2G36910 ABCB1 ARABIDOPSIS THALIANA P GLYCOPROTEIN1|ATP binding cassette subfamily B1|ATP-binding cassette B1|ATPGP1|P-GLYCOPROTEIN 1|PGP1|T1J8.9|T1J8_9 ATP binding cassette subfamily B1 protein-coding SNsp peak7343 2 15631379 15632145 + Intergenic -4730 AT2G37210 LOG3 LONELY GUY 3|T2N18.3|T2N18_3 lysine decarboxylase family protein protein-coding SNsp peak7366 2 15767845 15768850 + promoter-TSS (AT2G37590.1) -739 AT2G37590 DOF2.4 ATDOF2.4|DNA binding with one finger 2.4|F13M22.9|F13M22_9 DNA binding with one finger 2.4 protein-coding SNsp peak7414 2 16042715 16043122 + promoter-TSS (AT2G38290.2) -397 AT2G38290 AMT2 AMMONIUM TRANSPORTER 2|AMMONIUM TRANSPORTER 2;1|AMT2;1|ATAMT2|F16M14.22|F16M14_22|ammonium transporter 2 ammonium transporter 2 protein-coding SNsp peak7426 2 16075719 16076175 + promoter-TSS (AT2G38380.1) -342 AT2G38380 AT2G38380 T19C21.13|T19C21_13 Peroxidase superfamily protein protein-coding SNsp peak7466 2 16253797 16254198 + Intergenic -2980 AT2G38920 AT2G38920 T7F6.9|T7F6_9 SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-like protein protein-coding SNsp peak7474 2 16297877 16298414 + promoter-TSS (AT2G39030.1) 35 AT2G39030 NATA1 N-acetyltransferase activity 1|T7F6.20|T7F6_20 Acyl-CoA N-acyltransferases (NAT) superfamily protein protein-coding SNsp peak7475 2 16299935 16301289 + intron (AT2G39040.1, intron 2 of 3) 633 AT2G39040 AT2G39040 T7F6.21|T7F6_21 Peroxidase superfamily protein protein-coding SNsp peak7538 2 16632564 16633301 + intron (AT2G39850.1, intron 7 of 9) -1587 AT2G39851 AT2G39851 - Proteinase inhibitor, propeptide protein-coding SNsp peak7590 2 16884811 16886216 + Intergenic -1254 AT2G40435 AT2G40435 T2P4.23 transcription factor SCREAM-like protein protein-coding SNsp peak7597 2 16926359 16926833 + promoter-TSS (AT2G40530.1) -905 AT2G40530 AT2G40530 T2P4.12|T2P4_12 transmembrane protein protein-coding SNsp peak7652 2 17192065 17194482 + Intergenic -1787 AT2G41225 AT2G41225 - transmembrane protein protein-coding SNsp peak7651 2 17189094 17190028 + TTS (AT2G41220.1) 1925 AT2G41225 AT2G41225 - transmembrane protein protein-coding SNsp peak7699 2 17441986 17442423 + promoter-TSS (AT2G41810.1) -788 AT2G41810 AT2G41810 T11A7.9|T11A7_9 imidazolonepropionase (Protein of unknown function, DUF642) protein-coding SNsp peak7753 2 17741383 17743418 + Intergenic -3233 AT2G42600 PPC2 ATPPC2|F14N22.13|F14N22_13|phosphoenolpyruvate carboxylase 2 phosphoenolpyruvate carboxylase 2 protein-coding SNsp peak7754 2 17744477 17745420 + Intergenic -2833 AT2G42610 LSH10 LIGHT SENSITIVE HYPOCOTYLS 10 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) protein-coding SNsp peak7757 2 17768729 17769482 + promoter-TSS (AT2G09390.1) -726 AT2G42660 AT2G42660 F14N22.7|F14N22_7 Homeodomain-like superfamily protein protein-coding SNsp peak7850 2 18232563 18232769 + promoter-TSS (AT2G44070.1) -36 AT2G44070 AT2G44070 F6E13.20 NagB/RpiA/CoA transferase-like superfamily protein protein-coding SNsp peak7851 2 18233635 18237071 + Intergenic -1436 AT2G44080 ARL ARGOS-like|F6E13.21 ARGOS-like protein protein-coding SNsp peak7883 2 18396890 18397503 + promoter-TSS (AT2G44570.1) -859 AT2G44570 GH9B12 AtGH9B12|F16B22.6|glycosyl hydrolase 9B12 glycosyl hydrolase 9B12 protein-coding SNsp peak7895 2 18449022 18449468 + promoter-TSS (AT2G44745.1) -152 AT2G44745 WRKY12 AtWRKY12|WRKY DNA-binding protein 12 WRKY family transcription factor protein-coding SNsp peak7902 2 18476697 18478382 + promoter-TSS (AT2G44810.2) -835 AT2G44810 DAD1 DEFECTIVE ANTHER DEHISCENCE 1|F16B22.45 alpha/beta-Hydrolases superfamily protein protein-coding SNsp peak7904 2 18483837 18484493 + promoter-TSS (AT2G44820.2) 91 AT2G44820 AT2G44820 F16B22.34|F16B22_34 axoneme-associated protein MST101(2) protein protein-coding SNsp peak7954 2 18708778 18708961 + promoter-TSS (AT2G45403.1) -432 AT2G45403 AT2G45403 - hypothetical protein protein-coding SNsp peak7955 2 18709297 18709502 + promoter-TSS (AT2G45403.1) 98 AT2G45403 AT2G45403 - hypothetical protein protein-coding SNsp peak7956 2 18710325 18711779 + TTS (AT2G45403.1) 496 AT2G45406 AT2G45406 - Galactose oxidase/kelch repeat superfamily protein protein-coding SNsp peak7957 2 18717407 18717925 + promoter-TSS (AT2G45420.1) -682 AT2G45420 LBD18 F4L23.7|LOB domain-containing protein 18 LOB domain-containing protein 18 protein-coding SNsp peak7958 2 18718742 18718951 + exon (AT2G45420.1, exon 1 of 2) 498 AT2G45420 LBD18 F4L23.7|LOB domain-containing protein 18 LOB domain-containing protein 18 protein-coding SNsp peak8055 2 19204807 19205078 + TTS (AT2G46740.1) 757 AT2G46735 AT2G46735 - death domain associated protein protein-coding SNsp peak8056 2 19207714 19208394 + promoter-TSS (AT2G46740.1) -446 AT2G46740 GulLO5 4-lactone ( L -GulL) oxidase 5|AtGulLO5|F19D11.2|L -gulono-1 D-arabinono-1,4-lactone oxidase family protein protein-coding SNsp peak8057 2 19209455 19209798 + intron (AT2G46750.1, intron 2 of 3) 1395 AT2G46750 GulLO2 4-lactone ( L -GulL) oxidase 2|AtGulLO2|F19D11.3|L -gulono-1 D-arabinono-1,4-lactone oxidase family protein protein-coding SNsp peak8058 2 19213723 19215449 + exon (AT2G46760.1, exon 1 of 4) 624 AT2G46760 GulLO6 4-lactone ( L -GulL) oxidase 6|AtGulLO6|F19D11.4|L -gulono-1 D-arabinono-1,4-lactone oxidase family protein protein-coding SNsp peak8059 2 19225644 19226606 + Intergenic -2945 AT2G46780 AT2G46780 F19D11.6 RNA-binding (RRM/RBD/RNP motifs) family protein protein-coding SNsp peak8068 2 19256535 19256930 + Intergenic 3062 AT2G46860 PPa3 AtPPa3|F19D11.23|F19D11_23|pyrophosphorylase 3 pyrophosphorylase 3 protein-coding SNsp peak8097 2 19408147 19410620 + Intergenic -2285 AT2G47260 WRKY23 ATWRKY23|T8I13.10|WRKY DNA-BINDING PROTEIN 23|WRKY DNA-binding protein 23 WRKY DNA-binding protein 23 protein-coding SNsp peak8098 2 19413276 19413545 + Intergenic -1082 AT2G47270 UPB1 T8I13.11|UPBEAT1 transcription factor UPBEAT protein protein-coding SNsp peak8116 2 19486260 19487123 + promoter-TSS (AT2G47490.1) -151 AT2G47490 NDT1 ARABIDOPSIS THALIANA NAD+ TRANSPORTER 1|ATNDT1|NAD+ transporter 1|T30B22.21 NAD+ transporter 1 protein-coding SNsp peak8180 3 164346 164823 + TTS (AT3G01430.1) -1679 AT3G01420 DOX1 ALPHA-DOX1|DIOX1|PADOX-1|T13O15.6|T13O15_6|alpha-dioxygenase 1|plant alpha dioxygenase 1 Peroxidase superfamily protein protein-coding SNsp peak8228 3 420701 420955 + promoter-TSS (AT3G02245.1) 721 AT3G02242 AT3G02242 GLV8|GOLVEN 8 root meristem growth factor-like protein protein-coding SNsp peak9100 3 5421464 5422825 + TTS (AT3G03205.1) 320 AT3G03205 AT3G03205 - ncRNA ncRNA SNsp peak8308 3 903177 903996 + promoter-TSS (AT3G03670.1) -175 AT3G03670 AT3G03670 T12J13.5|T12J13_5 Peroxidase superfamily protein protein-coding SNsp peak9285 3 6388910 6389286 + promoter-TSS (AT3G03715.1) -169 AT3G03715 AT3G03715 - ncRNA ncRNA SNsp peak9286 3 6390900 6392694 + promoter-TSS (AT3G03735.1) -77 AT3G03735 AT3G03735 - ncRNA ncRNA SNsp peak9462 3 7365420 7366522 + promoter-TSS (AT3G04045.1) -455 AT3G04045 AT3G04045 - ncRNA ncRNA SNsp peak9968 3 10033852 10034077 + promoter-TSS (AT3G05175.1) 91 AT3G05175 AT3G05175 - ncRNA ncRNA SNsp peak10010 3 10235706 10237002 + promoter-TSS (AT3G05275.1) -454 AT3G05275 AT3G05275 - ncRNA ncRNA SNsp peak8426 3 1577053 1577882 + promoter-TSS (AT3G05460.1) -323 AT3G05460 AT3G05460 F22F7.9|F22F7_9 sporozoite surface protein-like protein protein-coding SNsp peak8500 3 1997520 1997802 + Intergenic -4797 AT3G06483 PDK ATPDHK|PYRUVATE DEHYDROGENASE KINASE|pyruvate dehydrogenase kinase pyruvate dehydrogenase kinase protein-coding SNsp peak10948 3 18706012 18707219 + TTS (AT3G08115.1) 1181 AT3G08115 AT3G08115 - ncRNA ncRNA SNsp peak11334 3 20687098 20687539 + Intergenic 1327 AT3G08585 AT3G08585 - ncRNA ncRNA SNsp peak11470 3 21373475 21375239 + TTS (AT3G57670.1) 971 AT3G08965 AT3G08965 - ncRNA ncRNA SNsp peak8861 3 4108797 4109006 + promoter-TSS (AT3G12910.1) -474 AT3G12910 AT3G12910 MGH6.1|MGH6.22|MGH6_1|MJM20.5 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein protein-coding SNsp peak8980 3 4802363 4802805 + TTS (AT3G14380.1) 1884 AT3G14380 AT3G14380 CASP-like protein 2A2|CASPL2A2 Uncharacterized protein family (UPF0497) protein-coding SNsp peak9062 3 5233930 5234761 + promoter-TSS (AT3G15500.1) -112 AT3G15500 NAC3 ANAC055|ATNAC3|NAC domain containing protein 3|NAC domain containing protein 55|NAC-DOMAIN ENCODING GENE|NAC055 NAC domain containing protein 3 protein-coding SNsp peak9132 3 5581136 5581551 + promoter-TSS (AT3G16430.1) -225 AT3G16430 JAL31 PBPII|jacalin-related lectin 31 jacalin-related lectin 31 protein-coding SNsp peak9179 3 5824575 5825293 + promoter-TSS (AT3G17080.1) -355 AT3G17080 AT3G17080 - Plant self-incompatibility protein S1 family protein-coding SNsp peak9284 3 6385045 6385758 + exon (AT3G18550.3, exon 4 of 4) 1714 AT3G18550 BRC1 ATTCP18|AtBRC1|BRANCHED 1|TCP18 TCP family transcription factor protein-coding SNsp peak9341 3 6674536 6674822 + exon (AT3G19270.1, exon 7 of 8) 1841 AT3G19270 CYP707A4 ''cytochrome P450|cytochrome P450|family 707|polypeptide 4|polypeptide 4''|subfamily A cytochrome P450, family 707, subfamily A, polypeptide 4 protein-coding SNsp peak9450 3 7298468 7299315 + Intergenic -1553 AT3G20840 PLT1 PLETHORA 1 Integrase-type DNA-binding superfamily protein protein-coding SNsp peak9459 3 7356641 7357097 + intron (AT3G20980.1, intron 2 of 2) 906 AT3G20980 AT3G20980 - Gag-Pol-related retrotransposon family protein protein-coding SNsp peak9491 3 7514715 7514939 + exon (AT3G21340.1, exon 3 of 13) 1246 AT3G21340 AT3G21340 - Leucine-rich repeat protein kinase family protein protein-coding SNsp peak9506 3 7579834 7580325 + promoter-TSS (AT3G21510.1) -290 AT3G21510 AHP1 histidine-containing phosphotransmitter 1 histidine-containing phosphotransmitter 1 protein-coding SNsp peak9522 3 7649495 7651789 + TTS (AT3G21710.1) 2326 AT3G21710 AT3G21710 VASCULAR-RELATED UNKNOWN PROTEIN 1|VUP1 transmembrane protein protein-coding SNsp peak9523 3 7659687 7660575 + exon (AT3G21730.1, exon 2 of 3) 1091 AT3G21730 FOLB3 - Dihydroneopterin aldolase protein-coding SNsp peak9538 3 7715623 7716263 + exon (AT3G21900.2, exon 2 of 2) 550 AT3G21900 AT3G21900 - Receptor-like protein kinase-related family protein protein-coding SNsp peak9540 3 7717014 7719531 + exon (AT3G21910.1, exon 2 of 2) 1004 AT3G21910 AT3G21910 - cysteine-rich repeat secretory protein, putative (DUF26) protein-coding SNsp peak9542 3 7724245 7726174 + TTS (AT3G21930.1) 1967 AT3G21930 AT3G21930 - cysteine-rich repeat secretory protein protein-coding SNsp peak9544 3 7736042 7737602 + promoter-TSS (AT3G21960.1) -158 AT3G21960 AT3G21960 - Receptor-like protein kinase-related family protein protein-coding SNsp peak9552 3 7779960 7780803 + intron (AT3G22085.1, intron 5 of 5) -1138 AT3G22080 AT3G22080 - ubiquitin carboxyl-terminal hydrolase-like protein protein-coding SNsp peak9558 3 7810058 7810986 + Intergenic -2339 AT3G22150 AT3G22150 - Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding SNsp peak9569 3 7870236 7870504 + promoter-TSS (AT3G22260.4) -456 AT3G22260 AT3G22260 - Cysteine proteinases superfamily protein protein-coding SNsp peak9581 3 7925828 7927908 + exon (AT3G22400.1, exon 1 of 9) 140 AT3G22400 LOX5 ATLOX5|Arabidopsis thaliana lipoxygenase 5 PLAT/LH2 domain-containing lipoxygenase family protein protein-coding SNsp peak9585 3 7941927 7942721 + TTS (AT3G22415.1) 1410 AT3G22415 AT3G22415 - hypothetical protein protein-coding SNsp peak9639 3 8191815 8193242 + Intergenic -2078 AT3G23050 IAA7 AUXIN RESISTANT 2|AXR2|indole-3-acetic acid 7 indole-3-acetic acid 7 protein-coding SNsp peak9638 3 8190101 8190851 + Intergenic -4130 AT3G23050 IAA7 AUXIN RESISTANT 2|AXR2|indole-3-acetic acid 7 indole-3-acetic acid 7 protein-coding SNsp peak9648 3 8250336 8251404 + exon (AT3G23140.1, exon 1 of 1) 351 AT3G23140 URO UPRIGHT ROSETTE C2H2 and C2HC zinc fingers superfamily protein protein-coding SNsp peak9656 3 8287326 8288073 + promoter-TSS (AT3G23220.1) -243 AT3G23220 ESE1 ethylene and salt inducible 1 Integrase-type DNA-binding superfamily protein protein-coding SNsp peak9659 3 8298114 8298326 + Intergenic 2603 AT3G23240 ERF1 ATERF1|AtERF#092|ERF1B|ETHYLENE RESPONSE FACTOR 1|ethylene response factor 1 ethylene response factor 1 protein-coding SNsp peak9661 3 8307777 8308175 + Intergenic -1233 AT3G23250 MYB15 ATMYB15|ATY19|MYB DOMAIN PROTEIN 15|myb domain protein 15 myb domain protein 15 protein-coding SNsp peak9689 3 8454304 8455238 + exon (AT3G23560.2, exon 5 of 6) 1937 AT3G23560 ALF5 ABERRANT LATERAL ROOT FORMATION 5 MATE efflux family protein protein-coding SNsp peak9736 3 8710325 8711387 + TTS (AT3G24130.1) -2520 AT3G24120 AT3G24120 - Homeodomain-like superfamily protein protein-coding SNsp peak9817 3 9204847 9205265 + promoter-TSS (AT3G25270.1) -91 AT3G25270 AT3G25270 - Ribonuclease H-like superfamily protein protein-coding SNsp peak9840 3 9332774 9333301 + promoter-TSS (AT3G25640.1) -625 AT3G25640 AT3G25640 - MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) protein-coding SNsp peak9839 3 9328745 9329197 + Intergenic -4691 AT3G25640 AT3G25640 - MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) protein-coding SNsp peak9845 3 9366384 9366606 + Intergenic -3004 AT3G25710 BHLH32 ATAIG1|TARGET OF MONOPTEROS 5|TMO5|basic helix-loop-helix 32 basic helix-loop-helix 32 protein-coding SNsp peak9857 3 9431623 9432573 + exon (AT3G25810.1, exon 3 of 7) 1336 AT3G25810 AT3G25810 - Terpenoid cyclases/Protein prenyltransferases superfamily protein protein-coding SNsp peak9933 3 9856383 9857343 + promoter-TSS (AT3G26790.1) -651 AT3G26790 FUS3 FUSCA 3 AP2/B3-like transcriptional factor family protein protein-coding SNsp peak9937 3 9876084 9877669 + promoter-TSS (at3g26816) -773 at3g26816 SNsp peak9938 3 9879131 9879669 + promoter-TSS (at3g26819) -646 at3g26819 SNsp peak10038 3 10392019 10392964 + TTS (AT3G27990.1) -1413 AT3G27980 AT3G27980 - Plant invertase/pectin methylesterase inhibitor superfamily protein-coding SNsp peak10064 3 10533747 10534256 + TTS (AT3G28250.1) 677 AT3G28250 AT3G28250 - Carbohydrate-binding X8 domain superfamily protein protein-coding SNsp peak10065 3 10539607 10541001 + TTS (AT3G28280.1) 1366 AT3G28280 AT3G28280 - F-box/associated interaction domain protein protein-coding SNsp peak10074 3 10602376 10602605 + Intergenic -3448 AT3G28345 ABCB15 ATP-binding cassette B15|MDR13|multi-drug resistance 13 ABC transporter family protein protein-coding SNsp peak10201 3 11530731 11532196 + exon (AT3G29680.1, exon 1 of 1) 1565 AT3G29680 AT3G29680 - HXXXD-type acyl-transferase family protein protein-coding SNsp peak10233 3 11951946 11952990 + Intergenic -3990 AT3G30340 UMAMIT32 Usually multiple acids move in and out Transporters 32 nodulin MtN21 /EamA-like transporter family protein protein-coding SNsp peak10499 3 16123764 16124530 + promoter-TSS (AT3G06845.1) 126 AT3G44540 FAR4 fatty acid reductase 4 fatty acid reductase 4 protein-coding SNsp peak10500 3 16124983 16125349 + intron (AT3G44540.1, intron 3 of 9) 1145 AT3G44540 FAR4 fatty acid reductase 4 fatty acid reductase 4 protein-coding SNsp peak10538 3 16424951 16425320 + Intergenic 1977 AT3G44955 AT3G44955 67246.TRNA-GLY-1 tRNA tRNA SNsp peak10540 3 16430609 16431506 + Intergenic -1229 AT3G44970 AT3G44970 - Cytochrome P450 superfamily protein protein-coding SNsp peak10550 3 16484541 16484859 + Intergenic 2649 AT3G45070 AT3G45070 AtSULT202B1|SULT202B1|sulfotransferase 202B1 P-loop containing nucleoside triphosphate hydrolases superfamily protein protein-coding SNsp peak10563 3 16566042 16567529 + promoter-TSS (AT3G45220.1) -455 AT3G45220 AT3G45220 - Serine protease inhibitor (SERPIN) family protein protein-coding SNsp peak10627 3 16984530 16986009 + promoter-TSS (AT3G46230.1) -402 AT3G46230 HSP17.4 ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.4|ATHSP17.4|SMALL HEAT-SHOCK PROTEIN 17.4|heat shock protein 17.4 heat shock protein 17.4 protein-coding SNsp peak10637 3 17042606 17044346 + promoter-TSS (AT3G46360.1) 24 AT3G46360 AT3G46360 - transmembrane protein protein-coding SNsp peak10672 3 17250483 17251151 + promoter-TSS (AT3G46840.1) -194 AT3G46840 AT3G46840 - Subtilase family protein protein-coding SNsp peak10674 3 17261736 17263610 + promoter-TSS (AT3G46870.1) -270 AT3G46870 AT3G46870 - Pentatricopeptide repeat (PPR) superfamily protein protein-coding SNsp peak10712 3 17456070 17456580 + Intergenic -1289 AT3G47380 AT3G47380 - Plant invertase/pectin methylesterase inhibitor superfamily protein protein-coding SNsp peak10715 3 17468566 17469772 + TTS (ENSRNA049757959-T1) 348 AT3G47410 AT3G47410 - hypothetical protein protein-coding SNsp peak10730 3 17542051 17543328 + Intergenic -1382 AT3G47600 MYB94 ATMYB94|ATMYBCP70|myb domain protein 94 myb domain protein 94 protein-coding SNsp peak10868 3 18284037 18284919 + TTS (AT3G49310.1) -1284 AT3G49307 AT3G49307 - Expressed protein protein-coding SNsp peak10878 3 18337872 18339188 + promoter-TSS (AT3G49450.1) 12 AT3G49450 AT3G49450 - F-box and associated interaction domains-containing protein protein-coding SNsp peak10903 3 18464835 18465544 + promoter-TSS (AT3G49780.1) -129 AT3G49780 PSK4 ATPSK3 (FORMER SYMBOL)|ATPSK4|phytosulfokine 4 precursor phytosulfokine 4 precursor protein-coding SNsp peak10927 3 18592753 18593780 + exon (AT3G50140.1, exon 2 of 3) 1449 AT3G50140 AT3G50140 - transmembrane protein, putative (DUF247) protein-coding SNsp peak10936 3 18647797 18650015 + exon (AT3G50310.1, exon 1 of 1) 615 AT3G50310 MAPKKK20 MAPKK kinase 20|MKKK20|mitogen-activated protein kinase kinase kinase 20 mitogen-activated protein kinase kinase kinase 20 protein-coding SNsp peak10937 3 18650581 18651040 + Intergenic -1289 AT3G50310 MAPKKK20 MAPKK kinase 20|MKKK20|mitogen-activated protein kinase kinase kinase 20 mitogen-activated protein kinase kinase kinase 20 protein-coding SNsp peak10975 3 18854831 18856673 + exon (AT3G50740.1, exon 1 of 1) 1288 AT3G50740 UGT72E1 F18B3.20|UDP-glucosyl transferase 72E1 UDP-glucosyl transferase 72E1 protein-coding SNsp peak10978 3 18867240 18867437 + promoter-TSS (AT3G50760.1) -496 AT3G50760 GATL2 F18B3.40|galacturonosyltransferase-like 2 galacturonosyltransferase-like 2 protein-coding SNsp peak10987 3 18905717 18906862 + Intergenic -4137 AT3G50850 AT3G50850 - Putative methyltransferase family protein protein-coding SNsp peak10988 3 18912086 18913698 + promoter-TSS (AT3G50880.1) -418 AT3G50880 AT3G50880 - DNA glycosylase superfamily protein protein-coding SNsp peak11057 3 19255698 19256500 + promoter-TSS (AT3G51895.2) -177 AT3G51895 SULTR3;1 AST12|SULFATE TRANSPORTER 1|sulfate transporter 3;1 sulfate transporter 3;1 protein-coding SNsp peak11123 3 19562758 19563928 + intron (AT3G52780.1, intron 1 of 5) 852 AT3G52780 PAP20 ATPAP20 Purple acid phosphatases superfamily protein protein-coding SNsp peak11130 3 19598010 19599601 + Intergenic -2971 AT3G52870 AT3G52870 - IQ calmodulin-binding motif family protein protein-coding SNsp peak11154 3 19729277 19730041 + Intergenic 1860 AT3G53232 RTFL1 DEVIL 20|DVL20|ROTUNDIFOLIA like 1 ROTUNDIFOLIA like 1 protein-coding SNsp peak11176 3 19857209 19858257 + intron (AT3G53550.1, intron 3 of 4) 863 AT3G53550 AT3G53550 - FBD-like domain family protein protein-coding SNsp peak11294 3 20477990 20479480 + promoter-TSS (AT3G08460.1) -386 AT3G55250 PDE329 PIGMENT DEFECTIVE 329 calcium homeostasis regulator protein-coding SNsp peak11347 3 20741023 20741247 + promoter-TSS (AT3G08615.1) 397 AT3G55890 AT3G55890 - Yippee family putative zinc-binding protein protein-coding SNsp peak11488 3 21456761 21456941 + TTS (AT3G57940.1) -3484 AT3G57950 AT3G57950 - cotton fiber protein protein-coding SNsp peak11794 3 23031197 23032093 + promoter-TSS (AT3G62220.1) 114 AT3G62230 DAF1 DUO1-activated F-box 1 F-box family protein protein-coding SNsp peak11896 4 90285 90602 + exon (AT4G00220.1, exon 1 of 2) 535 AT4G00220 JLO F6N15.4|F6N15_4|JAGGED LATERAL ORGANS|LBD30|LOB DOMAIN-CONTAINING PROTEIN 30 Lateral organ boundaries (LOB) domain family protein protein-coding SNsp peak11988 4 610036 611276 + TTS (AT4G01450.1) 2200 AT4G01450 UMAMIT30 F11O4.14|F11O4_14|Usually multiple acids move in and out Transporters 30 nodulin MtN21 /EamA-like transporter family protein protein-coding SNsp peak12102 4 1184632 1185070 + promoter-TSS (AT4G02690.2) 161 AT4G02680 EOL1 ETO1-like 1|T10P11.24|T10P11_24 ETO1-like 1 protein-coding SNsp peak12103 4 1190694 1190934 + exon (AT4G02700.1, exon 3 of 12) 1831 AT4G02700 SULTR3;2 sulfate transporter 3;2 sulfate transporter 3;2 protein-coding SNsp peak12117 4 1245815 1246861 + promoter-TSS (AT4G02790.1) -989 AT4G02790 EMB3129 EMBRYO DEFECTIVE 3129|T5J8.11|T5J8_11 GTP-binding family protein protein-coding SNsp peak11895 4 88024 89028 + promoter-TSS (AT4G03545.1) -50 AT4G03545 AT4G03545 - ncRNA ncRNA SNsp peak12104 4 1191958 1192454 + exon (AT4G02700.1, exon 8 of 12) -3063 AT4G04275 AT4G04275 - ncRNA ncRNA SNsp peak12307 4 2781036 2781874 + Intergenic -2616 AT4G05497 AT4G05497 - RNI-like superfamily protein protein-coding SNsp peak12564 4 6430263 6431476 + promoter-TSS (AT4G05780.1) -294 AT4G05780 AT4G05780 - ncRNA ncRNA SNsp peak12834 4 7888570 7889274 + TTS (AT4G06115.1) 150 AT4G06115 AT4G06115 - ncRNA ncRNA SNsp peak13629 4 12354768 12356037 + promoter-TSS (AT4G07170.1) -617 AT4G07170 AT4G07170 - ncRNA ncRNA SNsp peak13746 4 12983833 12985341 + TTS (AT4G07375.1) 443 AT4G07375 AT4G07375 - ncRNA ncRNA SNsp peak14147 4 15061997 15063104 + Intergenic 2034 AT4G08385 AT4G08385 - ncRNA ncRNA SNsp peak12455 4 5451046 5452021 + intron (AT4G08560.1, intron 2 of 5) 1099 AT4G08560 PUM15 APUM15|T15F16.9|T15F16_9|pumilio 15 pumilio 15 protein-coding SNsp peak14589 4 17534817 17536090 + TTS (AT4G09485.1) 433 AT4G09485 AT4G09485 - ncRNA ncRNA SNsp peak12567 4 6439647 6439824 + Intergenic 3819 AT4G10390 AT4G10390 F7L13.4 Protein kinase superfamily protein protein-coding SNsp peak12621 4 6743305 6745325 + promoter-TSS (AT4G11040.2) -785 AT4G11040 AT4G11040 RDO5|REDUCED DORMANCY 5|T22B4.20|T22B4_20 Protein phosphatase 2C family protein protein-coding SNsp peak12622 4 6745683 6746425 + intron (AT4G11040.1, intron 2 of 3) 935 AT4G11040 AT4G11040 RDO5|REDUCED DORMANCY 5|T22B4.20|T22B4_20 Protein phosphatase 2C family protein protein-coding SNsp peak12637 4 6820701 6820889 + TTS (AT4G11180.1) 762 AT4G11180 AT4G11180 DP1|T22B4.160|T22B4_160|dirigent protein 1 Disease resistance-responsive (dirigent-like protein) family protein protein-coding SNsp peak12641 4 6828543 6829615 + Intergenic 2492 AT4G11190 AT4G11190 T22B4.170|T22B4_170 Disease resistance-responsive (dirigent-like protein) family protein protein-coding SNsp peak12652 4 6891292 6892278 + promoter-TSS (AT4G11330.1) -141 AT4G11330 MPK5 ATMPK5|F8L21.120|F8L21_120|MAP kinase 5 MAP kinase 5 protein-coding SNsp peak12659 4 6931731 6931980 + promoter-TSS (AT4G11393.1) -464 AT4G11393 AT4G11393 - Defensin-like (DEFL) family protein protein-coding SNsp peak12660 4 6932211 6932406 + promoter-TSS (AT4G11393.1) -11 AT4G11393 AT4G11393 - Defensin-like (DEFL) family protein protein-coding SNsp peak12662 4 6941256 6942379 + promoter-TSS (AT4G11402.1) 68 AT4G11402 AT4G11402 - transmembrane protein protein-coding SNsp peak12669 4 6991911 6992504 + exon (AT4G11540.1, exon 1 of 1) 348 AT4G11540 AT4G11540 F25E4.160|F25E4_160 Cysteine/Histidine-rich C1 domain family protein protein-coding SNsp peak12670 4 6992760 6993162 + promoter-TSS (AT4G11540.1) -406 AT4G11540 AT4G11540 F25E4.160|F25E4_160 Cysteine/Histidine-rich C1 domain family protein protein-coding SNsp peak12716 4 7270398 7270735 + promoter-TSS (AT4G12150.1) -299 AT4G12150 AT4G12150 T4C9.2 RING/U-box superfamily protein protein-coding SNsp peak12790 4 7669178 7669441 + promoter-TSS (AT4G13210.2) -59 AT4G13200 AT4G13200 F17N18.90|F17N18_90 hypothetical protein protein-coding SNsp peak12803 4 7741804 7742703 + TTS (AT4G13300.1) 1970 AT4G13290 CYP71A19 ''cytochrome P450|T9E8.30|T9E8_30|cytochrome P450|family 71|polypeptide 19|polypeptide 19''|subfamily A cytochrome P450, family 71, subfamily A, polypeptide 19 protein-coding SNsp peak12804 4 7745473 7746050 + intron (AT4G13300.1, intron 2 of 6) 633 AT4G13300 TPS13 ATTPS13|T9E8.40|T9E8_40|terpenoid synthase 13 terpenoid synthase 13 protein-coding SNsp peak12805 4 7746671 7747033 + promoter-TSS (AT4G13300.1) -458 AT4G13300 TPS13 ATTPS13|T9E8.40|T9E8_40|terpenoid synthase 13 terpenoid synthase 13 protein-coding SNsp peak12823 4 7840197 7841090 + promoter-TSS (AT4G13490.1) -359 AT4G13490 AT4G13490 T6G15.40|T6G15_40 RING/U-box superfamily protein protein-coding SNsp peak12833 4 7886966 7888034 + promoter-TSS (AT4G13572.1) 60 AT4G13572 AT4G13572 - hypothetical protein protein-coding SNsp peak12839 4 7918510 7919636 + intron (AT4G13610.1, intron 5 of 12) 4051 AT4G13610 MEE57 T6G15.160|T6G15_160|maternal effect embryo arrest 57 DNA (cytosine-5-)-methyltransferase family protein protein-coding SNsp peak12840 4 7919942 7920652 + exon (AT4G13610.1, exon 10 of 13) -3838 AT4G13615 AT4G13615 - Uncharacterized protein family SERF protein-coding SNsp peak12876 4 8140386 8141743 + Intergenic -2672 AT4G14130 XTH15 DL3105C|FCAALL.173|XTR7|xyloglucan endotransglucosylase/hydrolase 15|xyloglucan endotransglycosylase 7 xyloglucan endotransglucosylase/hydrolase 15 protein-coding SNsp peak12893 4 8240219 8241982 + promoter-TSS (AT4G14310.1) 253 AT4G14315 AT4G14315 - transmembrane protein protein-coding SNsp peak12918 4 8395449 8396360 + Intergenic -1789 AT4G14640 CAM8 AtCML8|CALMODULIN 8|CML8|DL3360W|FCAALL.157|calmodulin 8|calmodulin-like 8 calmodulin 8 protein-coding SNsp peak12959 4 8595758 8596151 + TTS (AT4G15056.1) 1476 AT4G15056 AT4G15056 - hypothetical protein protein-coding SNsp peak12970 4 8647305 8647682 + TTS (AT4G15160.2) -1339 AT4G15165 AT4G15165 - N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein protein-coding SNsp peak12989 4 8755674 8756590 + intron (AT4G15340.1, intron 10 of 13) -2835 AT4G15330 CYP705A1 ''cytochrome P450|DL3710C|FCAALL.270|cytochrome P450|family 705|polypeptide 1|polypeptide 1''|subfamily A cytochrome P450, family 705, subfamily A, polypeptide 1 protein-coding SNsp peak12993 4 8794422 8796238 + promoter-TSS (AT4G15390.1) -888 AT4G15390 AT4G15390 DL3740C|FCAALL.282 HXXXD-type acyl-transferase family protein protein-coding SNsp peak13010 4 8908204 8909553 + promoter-TSS (AT4G15610.2) -1 AT4G15610 AT4G15610 CASP-like protein 1D1|CASPL1D1|DL3845W|FCAALL.139 Uncharacterized protein family (UPF0497) protein-coding SNsp peak13020 4 8969125 8970749 + TTS (AT4G15755.1) -1322 AT4G15750 AT4G15750 DL3915C|FCAALL.95 Plant invertase/pectin methylesterase inhibitor superfamily protein protein-coding SNsp peak13055 4 9182433 9182748 + intron (AT4G16220.1, intron 1 of 2) 307 AT4G16220 AT4G16220 DL4150W|FCAALL.316 GDSL-like Lipase/Acylhydrolase superfamily protein protein-coding SNsp peak13054 4 9180957 9181313 + Intergenic -1148 AT4G16220 AT4G16220 DL4150W|FCAALL.316 GDSL-like Lipase/Acylhydrolase superfamily protein protein-coding SNsp peak13056 4 9184596 9186370 + exon (AT4G16230.1, exon 1 of 5) 185 AT4G16230 AT4G16230 DL4155W|FCAALL.318 GDSL-like Lipase/Acylhydrolase superfamily protein protein-coding SNsp peak13057 4 9186806 9187660 + promoter-TSS (AT4G16233.1) -772 AT4G16233 AT4G16233 - GDSL-like lipase/acylhydrolase superfamily protein protein-coding SNsp peak13103 4 9405089 9406063 + intron (AT4G16730.2, intron 5 of 5) -2035 AT4G16740 TPS03 ATTPS03|DL4395W|FCAALL.18|terpene synthase 03 terpene synthase 03 protein-coding SNsp peak13111 4 9442822 9444450 + Intergenic -5478 AT4G16780 HB-2 ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2|ATHB-2|ATHB2|DL4415W|FCAALL.101|HAT4|homeobox protein 2 homeobox protein 2 protein-coding SNsp peak13116 4 9464357 9465265 + Intergenic -2558 AT4G16810 AT4G16810 DL4430C|FCAALL.38 VEFS-Box of polycomb protein protein-coding SNsp peak13195 4 9897537 9899622 + Intergenic -1891 AT4G17800 AT4G17800 AHL23|AT-hook motif nuclear localized protein 23|DL4935C|FCAALL.129 Putative AT-hook DNA-binding family protein protein-coding SNsp peak13206 4 9961816 9962533 + TTS (AT4G17920.1) 1916 AT4G17920 AT4G17920 T6K21.100|T6K21_100 RING/U-box superfamily protein protein-coding SNsp peak13218 4 10021420 10021636 + promoter-TSS (AT4G18050.2) -258 AT4G18050 ABCB9 ATP-binding cassette B9|F15J5.20|F15J5_20|P-glycoprotein 9|P-glycoprotein 9|PGP9 P-glycoprotein 9 protein-coding SNsp peak13242 4 10136110 10136369 + Intergenic -4047 AT4G18340 AT4G18340 T9A21.190|T9A21_190 Glycosyl hydrolase superfamily protein protein-coding SNsp peak13243 4 10138551 10138921 + Intergenic -3519 AT4G18350 NCED2 ATNCED2|F28J12.10|F28J12_10|NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 2|nine-cis-epoxycarotenoid dioxygenase 2 nine-cis-epoxycarotenoid dioxygenase 2 protein-coding SNsp peak13283 4 10366516 10367653 + intron (AT4G18910.2, intron 2 of 3) 1025 AT4G18910 NIP1;2 ATNLM2|F13C5.80|F13C5_80|NLM2|NOD26-LIKE INTRINSIC PROTEIN 2|NOD26-like intrinsic protein 1;2 NOD26-like intrinsic protein 1;2 protein-coding SNsp peak13284 4 10368102 10368724 + promoter-TSS (AT4G18920.1) -342 AT4G18920 AT4G18920 F13C5.90|F13C5_90 histone acetyltransferase (DUF1264) protein-coding SNsp peak13285 4 10372588 10372997 + TTS (AT4G18930.1) 134 AT4G18940 AT4G18940 F13C5.110|F13C5_110 RNA ligase/cyclic nucleotide phosphodiesterase family protein protein-coding SNsp peak13313 4 10507878 10510736 + Intergenic -1186 AT4G19220 AT4G19220 T18B16.190|T18B16_190 Tetratricopeptide repeat (TPR)-like superfamily protein protein-coding SNsp peak13315 4 10516451 10517721 + Intergenic -4173 AT4G19230 CYP707A1 ''cytochrome P450|T18B16.200|T18B16_200|cytochrome P450|family 707|polypeptide 1|polypeptide 1''|subfamily A cytochrome P450, family 707, subfamily A, polypeptide 1 protein-coding SNsp peak13363 4 10803479 10804377 + exon (AT4G19930.1, exon 1 of 1) 370 AT4G19930 AT4G19930 F18F4.30|F18F4_30 F-box and associated interaction domains-containing protein protein-coding SNsp peak13367 4 10817129 10818639 + promoter-TSS (AT4G19970.1) -244 AT4G19970 AT4G19970 F18F4.70|F18F4_70 nucleotide-diphospho-sugar transferase family protein protein-coding SNsp peak13389 4 10931174 10931644 + promoter-TSS (AT4G20235.2) -132 AT4G20235 CYP71A28 ''cytochrome P450|F1C12.160B|cytochrome P450|family 71|polypeptide 28|polypeptide 28''|subfamily A cytochrome P450, family 71, subfamily A, polypeptide 28 protein-coding SNsp peak13390 4 10932157 10932487 + intron (AT4G20240.1, intron 2 of 3) -1045 AT4G20235 CYP71A28 ''cytochrome P450|F1C12.160B|cytochrome P450|family 71|polypeptide 28|polypeptide 28''|subfamily A cytochrome P450, family 71, subfamily A, polypeptide 28 protein-coding SNsp peak13499 4 11588830 11589214 + promoter-TSS (AT4G21840.1) -649 AT4G21840 MSRB8 ATMSRB8|T8O5.50|T8O5_50|methionine sulfoxide reductase B8 methionine sulfoxide reductase B8 protein-coding SNsp peak13508 4 11643793 11644536 + promoter-TSS (AT4G21950.1) 42 AT4G21950 AT4G21950 F1N20.4 hypothetical protein protein-coding SNsp peak13546 4 11827317 11828215 + exon (AT4G22430.1, exon 1 of 1) 107 AT4G22430 AT4G22430 F7K2.10|F7K2_10 LOW protein: F-box/kelch-repeat protein protein-coding SNsp peak13584 4 12067254 12067737 + intron (AT4G23020.2, intron 1 of 3) 1043 AT4G23020 TRM11 F7H19.210|F7H19_210|TON1 Recruiting Motif 11 hypothetical protein protein-coding SNsp peak13590 4 12098431 12098724 + exon (AT4G23080.1, exon 7 of 7) 2903 AT4G23090 AT4G23090 F7H19.280|F7H19_280 transmembrane protein protein-coding SNsp peak13626 4 12332451 12333171 + promoter-TSS (AT4G23660.4) -935 AT4G23660 PPT1 4-HYDROXYBENZOATE POLYPRENYL DIPHOSPHATE TRANSFERASE|AtPPT1|F9D16.130|F9D16_130|polyprenyltransferase 1 polyprenyltransferase 1 protein-coding SNsp peak13947 4 14098221 14099239 + Intergenic -3828 AT4G28530 NAC074 F20O9.220|F20O9_220|NAC domain containing protein 74|anac074 NAC domain containing protein 74 protein-coding SNsp peak13948 4 14101387 14101995 + Intergenic -5044 AT4G28540 CKL6 F20O9.240|F20O9_240|PAPK1|casein kinase I-like 6 casein kinase I-like 6 protein-coding SNsp peak14000 4 14338737 14339124 + Intergenic -2021 AT4G29100 AT4G29100 F19B15.130|F19B15_130 basic helix-loop-helix (bHLH) DNA-binding superfamily protein protein-coding SNsp peak14004 4 14356756 14358430 + Intergenic -2392 AT4G29130 HXK1 ARABIDOPSIS THALIANA HEXOKINASE 1|ATHXK1|F19B15.160|F19B15_160|GIN2|GLUCOSE INSENSITIVE 2|HEXOKINASE|hexokinase 1 hexokinase 1 protein-coding SNsp peak14013 4 14396564 14397196 + Intergenic 3318 AT4G29200 AT4G29200 F17A13.20|F17A13_20 Beta-galactosidase related protein protein-coding SNsp peak14016 4 14412399 14412680 + intron (AT4G29230.3, intron 3 of 4) 2668 AT4G29230 NAC075 F17A13.50|F17A13_50|NAC domain containing protein 75|anac075 NAC domain containing protein 75 protein-coding SNsp peak14036 4 14508941 14509216 + TTS (AT4G29570.1) -1069 AT4G29580 AT4G29580 T16L4.90|T16L4_90 Cytidine/deoxycytidylate deaminase family protein protein-coding SNsp peak14047 4 14565582 14566839 + promoter-TSS (AT4G29740.3) 27 AT4G29740 CKX4 ATCKX4|T16L4.250|T16L4_250|cytokinin oxidase 4 cytokinin oxidase 4 protein-coding SNsp peak14048 4 14568006 14568187 + exon (AT4G29740.3, exon 3 of 4) -1569 AT4G29750 AT4G29750 T16L4.260|T16L4_260 CRS1 / YhbY (CRM) domain-containing protein protein-coding SNsp peak14113 4 14892835 14893064 + Intergenic -1124 AT4G30470 AT4G30470 F17I23.190|F17I23_190 NAD(P)-binding Rossmann-fold superfamily protein protein-coding SNsp peak14238 4 15582068 15582471 + Intergenic -1063 AT4G32280 IAA29 F10M6.1|indole-3-acetic acid inducible 29 indole-3-acetic acid inducible 29 protein-coding SNsp peak14248 4 15634503 15635649 + exon (AT4G32380.1, exon 9 of 9) -1339 AT4G32390 AT4G32390 F8B4.90|F8B4_90 Nucleotide-sugar transporter family protein protein-coding SNsp peak14430 4 16691793 16692560 + Intergenic -1868 AT4G35070 AT4G35070 T12J5.5 SBP (S-ribonuclease binding protein) family protein protein-coding SNsp peak14522 4 17189140 17189946 + intron (AT4G36380.2, intron 4 of 7) 2293 AT4G36370 AT4G36370 F23E13.210|F23E13_210 hypothetical protein protein-coding SNsp peak14611 4 17654067 17654573 + Intergenic -4253 AT4G37553 AT4G37553 - ncRNA ncRNA SNsp peak14623 4 17717538 17718015 + promoter-TSS (AT4G37710.2) -342 AT4G37710 AT4G37710 T28I19.3|VQ MOTIF-CONTAINING PROTEIN 29|VQ29 VQ motif-containing protein protein-coding SNsp peak14630 4 17736522 17736903 + Intergenic -2802 AT4G37750 ANT AINTEGUMENTA|AtANT|CKC|CKC1|COMPLEMENTING A PROTEIN KINASE C MUTANT 1|DRAGON|DRG|T28I19.30|T28I19_30 Integrase-type DNA-binding superfamily protein protein-coding SNsp peak14633 4 17753560 17754350 + exon (AT4G37770.1, exon 4 of 4) 1876 AT4G37770 ACS8 1-amino-cyclopropane-1-carboxylate synthase 8|T28I19.50|T28I19_50 1-amino-cyclopropane-1-carboxylate synthase 8 protein-coding SNsp peak14634 4 17754752 17755387 + TTS (AT4G37770.1) 2990 AT4G37770 ACS8 1-amino-cyclopropane-1-carboxylate synthase 8|T28I19.50|T28I19_50 1-amino-cyclopropane-1-carboxylate synthase 8 protein-coding SNsp peak14653 4 17845300 17847097 + intron (AT4G37950.1, intron 7 of 15) 1542 AT4G37950 AT4G37950 F20D10.70|F20D10_70 Rhamnogalacturonate lyase family protein protein-coding SNsp peak14656 4 17865707 17865961 + exon (AT4G38030.1, exon 4 of 13) 896 AT4G38030 AT4G38030 F20D10.150|F20D10_150 Rhamnogalacturonate lyase family protein protein-coding SNsp peak14740 4 18336762 18337524 + Intergenic -1984 AT4G39420 AT4G39420 F23K16.50|F23K16_50 spatacsin carboxy-terminus protein protein-coding SNsp peak14760 4 18451422 18452035 + promoter-TSS (AT4G39770.1) -423 AT4G39770 TPPH T19P19.160|T19P19_160|trehalose-6-phosphate phosphatase H Haloacid dehalogenase-like hydrolase (HAD) superfamily protein protein-coding SNsp peak15376 5 3162720 3163446 + Intergenic -1393 AT5G01655 AT5G01655 - ncRNA ncRNA SNsp peak14840 5 282779 283294 + Intergenic 2362 AT5G01740 AT5G01740 T20L15.10|T20L15_10 Nuclear transport factor 2 (NTF2) family protein protein-coding SNsp peak14862 5 418386 419219 + promoter-TSS (AT5G02120.1) -289 AT5G02120 OHP PDE335|PIGMENT DEFECTIVE 335|T7H20.170|T7H20_170|one helix protein one helix protein protein-coding SNsp peak15870 5 5834040 5834662 + promoter-TSS (AT5G17700.3) -227 AT5G02765 AT5G02765 - ncRNA ncRNA SNsp peak15878 5 5874489 5875445 + promoter-TSS (AT5G02775.1) -44 AT5G02775 AT5G02775 - ncRNA ncRNA SNsp peak16154 5 7324929 7325099 + Intergenic -2831 AT5G03385 AT5G03385 - ncRNA ncRNA SNsp peak16181 5 7464238 7464950 + Intergenic -1730 AT5G03405 AT5G03405 - ncRNA ncRNA SNsp peak14979 5 1024702 1025322 + intron (AT5G03840.1, intron 3 of 3) 860 AT5G03840 TFL1 MED24.6|TERMINAL FLOWER 1|TFL-1 PEBP (phosphatidylethanolamine-binding protein) family protein protein-coding SNsp peak16674 5 10149138 10151110 + promoter-TSS (AT5G04695.1) -490 AT5G04695 AT5G04695 - ncRNA ncRNA SNsp peak15104 5 1689092 1689768 + exon (AT5G05653.1, exon 1 of 3) 138 AT5G05653 AT5G05653 - hypothetical protein protein-coding SNsp peak15116 5 1759159 1759922 + exon (AT5G05840.1, exon 2 of 3) 1126 AT5G05840 AT5G05840 MJJ3.26|MJJ3_26 replication factor C subunit, putative (DUF620) protein-coding SNsp peak17367 5 17049640 17051228 + promoter-TSS (AT5G06325.1) -335 AT5G06325 AT5G06325 - ncRNA ncRNA SNsp peak17540 5 17957347 17958161 + promoter-TSS (AT5G06585.1) -697 AT5G06585 AT5G06585 - ncRNA ncRNA SNsp peak15235 5 2367812 2368531 + intron (AT5G07480.2, intron 2 of 3) 802 AT5G07480 KUOX1 KAR-UP oxidoreductase 1|T2I1.190|T2I1_190 KAR-UP oxidoreductase 1 protein-coding SNsp peak18006 5 20394748 20394951 + TTS (AT5G07575.1) 580 AT5G07575 AT5G07575 - ncRNA ncRNA SNsp peak18185 5 21364117 21364532 + promoter-TSS (AT5G07905.1) -672 AT5G07905 AT5G07905 - ncRNA ncRNA SNsp peak18477 5 22793197 22793730 + promoter-TSS (AT5G08475.1) -384 AT5G08475 AT5G08475 - ncRNA ncRNA SNsp peak18519 5 22997465 22999161 + Intergenic -3664 AT5G08655 AT5G08655 - ncRNA ncRNA SNsp peak18533 5 23052937 23053595 + Intergenic -1200 AT5G08685 AT5G08685 - ncRNA ncRNA SNsp peak18938 5 25085687 25087419 + Intergenic 2762 AT5G09080 U2.15 - ncRNA ncRNA SNsp peak15561 5 4151668 4151905 + promoter-TSS (AT5G13080.1) -585 AT5G13080 WRKY75 ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75|ATWRKY75|T19L5.40|T19L5_40|WRKY DNA-binding protein 75 WRKY DNA-binding protein 75 protein-coding SNsp peak15577 5 4229282 4229847 + Intergenic -1847 AT5G13240 AT5G13240 T31B5.60|T31B5_60 transcription regulator protein-coding SNsp peak15650 5 4624940 4625278 + TTS (AT5G14340.1) 1673 AT5G14345 ENODL21 AtENODL21|early nodulin-like protein 21 early nodulin-like protein 21 protein-coding SNsp peak15694 5 4868769 4869807 + promoter-TSS (AT5G15030.1) -209 AT5G15030 AT5G15030 F2G14.150|F2G14_150 paired amphipathic helix Sin3-like protein protein-coding SNsp peak15695 5 4870380 4870970 + promoter-TSS (AT5G15040.2) 45 AT5G15040 AT5G15040 F2G14.160|F2G14_160 Paired amphipathic helix (PAH2) superfamily protein protein-coding SNsp peak15702 5 4903005 4903291 + Intergenic -1142 AT5G15130 WRKY72 ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 72|ATWRKY72|F8M21.20|F8M21_20|WRKY DNA-binding protein 72 WRKY DNA-binding protein 72 protein-coding SNsp peak15740 5 5127851 5128197 + intron (AT5G15725.1, intron 2 of 2) 649 AT5G15725 AT5G15725 GLV9|GOLVEN 9 transmembrane protein protein-coding SNsp peak15789 5 5412238 5412408 + promoter-TSS (AT5G16560.1) -557 AT5G16560 KAN KAN1|KANADI|KANADI 1|MQK4.31|MQK4_31 Homeodomain-like superfamily protein protein-coding SNsp peak15853 5 5742927 5744616 + exon (AT5G17430.2, exon 5 of 8) 1449 AT5G17430 BBM BABY BOOM|T10B6.90|T10B6_90 Integrase-type DNA-binding superfamily protein protein-coding SNsp peak15854 5 5745542 5746263 + promoter-TSS (AT5G17430.2) -154 AT5G17430 BBM BABY BOOM|T10B6.90|T10B6_90 Integrase-type DNA-binding superfamily protein protein-coding SNsp peak15881 5 5889895 5890195 + exon (AT5G17820.1, exon 1 of 3) 173 AT5G17820 AT5G17820 MVA3.170|MVA3_170 Peroxidase superfamily protein protein-coding SNsp peak15946 5 6233405 6234197 + exon (AT5G18690.1, exon 1 of 1) 450 AT5G18690 AGP25 ARABIDOPSIS THALIANA ARABINOGALACTAN PROTEINS 25|ATAGP25|T1A4.70|T1A4_70|arabinogalactan protein 25 arabinogalactan protein 25 protein-coding SNsp peak16035 5 6721000 6722243 + exon (AT5G19880.1, exon 2 of 4) 856 AT5G19880 AT5G19880 F28I16.30|F28I16_30 Peroxidase superfamily protein protein-coding SNsp peak16064 5 6841790 6842493 + intron (AT5G20270.1, intron 2 of 2) 805 AT5G20270 HHP1 F5O24.160|F5O24_160|heptahelical transmembrane protein1 heptahelical transmembrane protein1 protein-coding SNsp peak16155 5 7325487 7325878 + Intergenic -3188 AT5G22100 AT5G22100 - RNA cyclase family protein protein-coding SNsp peak16159 5 7347196 7348988 + intron (AT5G22160.1, intron 2 of 2) 1148 AT5G22160 AT5G22160 - transmembrane protein protein-coding SNsp peak16212 5 7641867 7643526 + exon (AT5G22860.4, exon 1 of 8) 402 AT5G22860 AT5G22860 MRN17.9|MRN17_9 Serine carboxypeptidase S28 family protein protein-coding SNsp peak16218 5 7673873 7674288 + Intergenic -2582 AT5G22940 F8H FRA8 homolog|MRN17.17|MRN17_17 glucuronoxylan glucuronosyltransferase, putative protein-coding SNsp peak16223 5 7693784 7694042 + Intergenic -1445 AT5G22990 AT5G22990 MRN17.22|MRN17_22 C2H2-like zinc finger protein protein-coding SNsp peak16228 5 7705106 7707406 + exon (AT5G23010.3, exon 8 of 9) 3164 AT5G23010 MAM1 2-ISOPROPYLMALATE SYNTHASE|2-ISOPROPYLMALATE SYNTHASE 3|IMS3|METHYLTHIOALKYLMALATE SYNTHASE|T20O7.3|T20O7_3|methylthioalkylmalate synthase 1 methylthioalkylmalate synthase 1 protein-coding SNsp peak16225 5 7699276 7700414 + Intergenic -3196 AT5G23010 MAM1 2-ISOPROPYLMALATE SYNTHASE|2-ISOPROPYLMALATE SYNTHASE 3|IMS3|METHYLTHIOALKYLMALATE SYNTHASE|T20O7.3|T20O7_3|methylthioalkylmalate synthase 1 methylthioalkylmalate synthase 1 protein-coding SNsp peak16231 5 7720812 7721855 + exon (AT5G23020.1, exon 9 of 10) 3215 AT5G23020 IMS2 2-isopropylmalate synthase 2|MAM-L|MAM3|METHYLTHIOALKYMALATE SYNTHASE-LIKE|MYJ24.1|MYJ24_1 2-isopropylmalate synthase 2 protein-coding SNsp peak16230 5 7719833 7720164 + exon (AT5G23020.1, exon 4 of 10) 1880 AT5G23020 IMS2 2-isopropylmalate synthase 2|MAM-L|MAM3|METHYLTHIOALKYMALATE SYNTHASE-LIKE|MYJ24.1|MYJ24_1 2-isopropylmalate synthase 2 protein-coding SNsp peak16229 5 7717536 7718034 + promoter-TSS (AT5G23020.1) -333 AT5G23020 IMS2 2-isopropylmalate synthase 2|MAM-L|MAM3|METHYLTHIOALKYMALATE SYNTHASE-LIKE|MYJ24.1|MYJ24_1 2-isopropylmalate synthase 2 protein-coding SNsp peak16232 5 7725881 7728165 + TTS (AT5G23035.1) 321 AT5G23030 TET12 MYJ24.2|MYJ24_2|tetraspanin12 tetraspanin12 protein-coding SNsp peak16288 5 8030630 8032254 + TTS (AT5G23810.1) 277 AT5G23820 AT5G23820 MD2-related lipid recognition 3|ML3|MRO11.14|MRO11_14 MD-2-related lipid recognition domain-containing protein protein-coding SNsp peak16309 5 8135049 8135617 + exon (AT5G24070.1, exon 3 of 4) 817 AT5G24070 AT5G24070 MZF18.4|MZF18_4 Peroxidase superfamily protein protein-coding SNsp peak16320 5 8184469 8184794 + intron (AT5G24160.1, intron 4 of 7) 1469 AT5G24160 SQE6 K12G2.4|K12G2_4|squalene monoxygenase 6 squalene monooxygenase 6 protein-coding SNsp peak16359 5 8384957 8386257 + intron (AT5G24540.1, intron 10 of 12) 2420 AT5G24540 BGLU31 K18P6.7|K18P6_7|beta glucosidase 31 beta glucosidase 31 protein-coding SNsp peak16380 5 8507389 8508865 + exon (AT5G24780.2, exon 2 of 3) 830 AT5G24780 VSP1 ATVSP1|T4C12.50|VEGETATIVE STORAGE PROTEIN 1|vegetative storage protein 1 vegetative storage protein 1 protein-coding SNsp peak16415 5 8669690 8670825 + TTS (AT5G25130.1) 2025 AT5G25130 CYP71B12 ''cytochrome P450|F21J6.2|cytochrome P450|family 71|polypeptide 12|polypeptide 12''|subfamily B cytochrome P450, family 71, subfamily B, polypeptide 12 protein-coding SNsp peak16445 5 8807781 8808185 + promoter-TSS (AT5G25370.2) -200 AT5G25370 PLDALPHA3 F18G18.110|F18G18_110|phospholipase D alpha 3 phospholipase D alpha 3 protein-coding SNsp peak16451 5 8836138 8836975 + exon (AT5G25415.1, exon 7 of 8) 2350 AT5G25415 AT5G25415 - hypothetical protein (DUF239) protein-coding SNsp peak16452 5 8842266 8844535 + Intergenic -1625 AT5G25420 AT5G25420 F18G18.160|F18G18_160 Xanthine/uracil/vitamin C permease protein-coding SNsp peak16486 5 9000428 9001547 + promoter-TSS (AT5G25820.1) -642 AT5G25820 AT5G25820 F18A17.70|F18A17_70 Exostosin family protein protein-coding SNsp peak16489 5 9014164 9015476 + exon (AT5G25850.1, exon 1 of 3) 738 AT5G25850 AT5G25850 F18A17.100|F18A17_100 F-box/RNI-like/FBD-like domains-containing protein protein-coding SNsp peak16548 5 9366573 9368240 + promoter-TSS (AT5G26620.1) -443 AT5G26620 AT5G26620 - hypothetical protein protein-coding SNsp peak16688 5 10335927 10336379 + Intergenic -1369 AT5G28370 AT5G28370 F21B23.6|F21B23_6 Pentatricopeptide repeat (PPR) superfamily protein protein-coding SNsp peak16952 5 14604308 14605873 + exon (AT5G36970.1, exon 1 of 2) 220 AT5G36970 NHL25 MLF18.15|MLF18_15|NDR1/HIN1-like 25 NDR1/HIN1-like 25 protein-coding SNsp peak17042 5 15123738 15125069 + promoter-TSS (AT5G37970.1) 32 AT5G37970 AT5G37970 K18L3.130|K18L3_130 S-adenosyl-L-methionine-dependent methyltransferase superfamily protein protein-coding SNsp peak17041 5 15122927 15123208 + TTS (AT5G37970.1) 1368 AT5G37970 AT5G37970 K18L3.130|K18L3_130 S-adenosyl-L-methionine-dependent methyltransferase superfamily protein protein-coding SNsp peak17044 5 15128900 15129153 + Intergenic -2263 AT5G37980 AT5G37980 K18L3.140|K18L3_140 Zinc-binding dehydrogenase family protein protein-coding SNsp peak17046 5 15134733 15135582 + promoter-TSS (AT5G37990.1) 12 AT5G37990 AT5G37990 K18L3.150|K18L3_150 S-adenosyl-L-methionine-dependent methyltransferase superfamily protein protein-coding SNsp peak17047 5 15142896 15143403 + exon (AT5G38000.1, exon 5 of 5) 1449 AT5G38000 AT5G38000 K19A23.1|K19A23_1 Zinc-binding dehydrogenase family protein protein-coding SNsp peak17083 5 15393063 15393454 + TTS (AT5G38450.1) 3035 AT5G38440 AT5G38440 MXI10.17|MXI10_17 Plant self-incompatibility protein S1 family protein-coding SNsp peak17144 5 15792917 15794454 + promoter-TSS (AT5G39470.1) -623 AT5G39470 AT5G39470 MUL8.150|MUL8_150 F-box family protein protein-coding SNsp peak17145 5 15797501 15797791 + Intergenic -1903 AT5G39471 AT5G39471 - Cysteine/Histidine-rich C1 domain family protein protein-coding SNsp peak17150 5 15840368 15840775 + exon (AT5G39550.1, exon 1 of 9) 107 AT5G39550 VIM3 MIJ24.3|MIJ24_3|ORTH1|ORTHRUS 1|VARIANT IN METHYLATION 3 Zinc finger (C3HC4-type RING finger) family protein protein-coding SNsp peak17155 5 15863115 15864676 + TTS (AT5G39620.1) 1887 AT5G39620 RABG1 AtRABG1|MIJ24.90|MIJ24_90|RAB GTPase homolog G1 RAB GTPase homolog G1 protein-coding SNsp peak17156 5 15866091 15866303 + promoter-TSS (AT5G39620.1) -415 AT5G39620 RABG1 AtRABG1|MIJ24.90|MIJ24_90|RAB GTPase homolog G1 RAB GTPase homolog G1 protein-coding SNsp peak17195 5 16115087 16115813 + exon (AT5G40310.2, exon 3 of 6) 366 AT5G40310 AT5G40310 MPO12.2|MPO12_2 Exonuclease family protein protein-coding SNsp peak17196 5 16117833 16119308 + promoter-TSS (AT5G40315.1) -677 AT5G40315 AT5G40315 - hypothetical protein protein-coding SNsp peak17272 5 16512837 16513332 + exon (AT5G41290.1, exon 1 of 2) 930 AT5G41290 AT5G41290 K1O13.9|K1O13_9 Receptor-like protein kinase-related family protein protein-coding SNsp peak17294 5 16644242 16646207 + promoter-TSS (AT5G41620.3) -933 AT5G41620 AT5G41620 MBK23.17|MBK23_17 intracellular protein transporter USO1-like protein protein-coding SNsp peak17305 5 16710682 16712134 + exon (AT5G41761.1, exon 1 of 1) 366 AT5G41761 AT5G41761 - hypothetical protein protein-coding SNsp peak17337 5 16865415 16866193 + promoter-TSS (AT5G42210.1) 34 AT5G42210 AT5G42210 K5J14.1|K5J14_1 Major facilitator superfamily protein protein-coding SNsp peak17344 5 16896179 16896694 + intron (AT5G42250.1, intron 5 of 8) -2276 AT5G42260 BGLU12 K5J14.7|K5J14_7|beta glucosidase 12 beta glucosidase 12 protein-coding SNsp peak17361 5 17004330 17005810 + intron (AT5G42530.1, intron 1 of 1) 440 AT5G42530 AT5G42530 MDH9.23|MDH9_23 hypothetical protein protein-coding SNsp peak17364 5 17034025 17036218 + Intergenic -1321 AT5G42590 CYP71A16 K16E1.6|K16E1_6|MRO|cytochrome P450|family 71|marneral oxidase|polypeptide 16|subfamily A cytochrome P450, family 71, subfamily A, polypeptide 16 protein-coding SNsp peak17416 5 17285845 17286203 + promoter-TSS (AT5G43068.1) -811 AT5G43068 AT5G43068 - transmembrane protein protein-coding SNsp peak17419 5 17294565 17295895 + promoter-TSS (AT5G43090.1) -703 AT5G43090 PUM13 APUM13|MMG4.11|MMG4_11|pumilio 13 pumilio 13 protein-coding SNsp peak17427 5 17335501 17336245 + TTS (AT5G43175.1) 1752 AT5G43175 AT5G43175 - basic helix-loop-helix (bHLH) DNA-binding superfamily protein protein-coding SNsp peak17444 5 17414080 17414349 + Intergenic -1484 AT5G43370 PHT1;2 APT1|ARABIDOPSIS PHOSPHATE TRANSPORTER 1|MWF20.6|MWF20_6|PHOSPHATE TRANSPORTER 2|PHT2|phosphate transporter 2 phosphate transporter 2 protein-coding SNsp peak17662 5 18622374 18622902 + promoter-TSS (AT5G45920.4) -9 AT5G45920 AT5G45920 K15I22.12|K15I22_12 SGNH hydrolase-type esterase superfamily protein protein-coding SNsp peak17697 5 18802478 18803244 + intron (AT5G46350.1, intron 1 of 2) 1195 AT5G46350 WRKY8 ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 8|ATWRKY8|MPL12.15|MPL12_15|WRKY DNA-binding protein 8 WRKY DNA-binding protein 8 protein-coding SNsp peak17741 5 19021698 19023202 + promoter-TSS (AT5G46874.1) 67 AT5G46874 AT5G46874 - Putative membrane lipoprotein protein-coding SNsp peak17744 5 19038580 19038784 + Intergenic -1744 AT5G46890 AT5G46890 MQD22.2|MQD22_2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein protein-coding SNsp peak17745 5 19041385 19042074 + Intergenic -1273 AT5G46900 AT5G46900 MQD22.3|MQD22_3 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein protein-coding SNsp peak17821 5 19440093 19441588 + Intergenic 6082 AT5G47990 CYP705A5 MDN11.4|MDN11_4|THAD|THAD1|THALIAN-DIOL DESATURASE|cytochrome P450|family 705|polypeptide 5|subfamily A cytochrome P450, family 705, subfamily A, polypeptide 5 protein-coding SNsp peak17825 5 19455964 19456198 + promoter-TSS (AT5G48010.2) -756 AT5G48010 THAS1 Arabidopsis thaliana thalianol synthase 1|AtTHAS1|MDN11.9|MDN11_9|THALIANOL SYNTHASE|THAS|thalianol synthase 1 thalianol synthase 1 protein-coding SNsp peak17826 5 19462045 19462675 + TTS (AT5G48020.1) 2611 AT5G48020 AT5G48020 MDN11.10|MDN11_10 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein protein-coding SNsp peak17833 5 19491686 19492806 + intron (AT5G48100.1, intron 2 of 5) 498 AT5G48100 TT10 ATLAC15|AtTT10|LAC15|LACCASE-LIKE 15|MDN11.18|MDN11_18|TRANSPARENT TESTA 10 Laccase/Diphenol oxidase family protein protein-coding SNsp peak17832 5 19490765 19491329 + exon (AT5G48100.1, exon 5 of 6) 1697 AT5G48100 TT10 ATLAC15|AtTT10|LAC15|LACCASE-LIKE 15|MDN11.18|MDN11_18|TRANSPARENT TESTA 10 Laccase/Diphenol oxidase family protein protein-coding SNsp peak17892 5 19783469 19784084 + Intergenic -1710 AT5G48790 AT5G48790 K24G6.12|K24G6_12 LOW PSII ACCUMULATION protein (DUF1995) protein-coding SNsp peak17925 5 19963052 19963393 + intron (AT5G49240.1, intron 1 of 3) 288 AT5G49240 APRR4 K21P3.12|K21P3_12|PRR4|PSEUDO-RESPONSE REGULATOR 4|pseudo-response regulator 4 pseudo-response regulator 4 protein-coding SNsp peak17931 5 19994509 19995785 + promoter-TSS (AT5G49310.1) -475 AT5G49310 IMPA-5 K21P3.21|K21P3_21|importin alpha isoform 5 importin alpha protein-coding SNsp peak17945 5 20074884 20075610 + promoter-TSS (AT5G49490.1) -81 AT5G49490 AGL83 AGAMOUS-like 83|K6M13.3|K6M13_3 AGAMOUS-like 83 protein-coding SNsp peak17975 5 20235195 20237308 + promoter-TSS (AT5G49800.2) -56 AT5G49800 AT5G49800 K21G20.1|K21G20_1 Polyketide cyclase/dehydrase and lipid transport superfamily protein protein-coding SNsp peak18005 5 20390864 20391164 + exon (AT5G50130.5, exon 1 of 6) 1036 AT5G50130 AT5G50130 MPF21.15|MPF21_15 NAD(P)-binding Rossmann-fold superfamily protein protein-coding SNsp peak18008 5 20400641 20401306 + Intergenic 5117 AT5G50140 AT5G50140 MPF21.16|MPF21_16 Ankyrin repeat family protein protein-coding SNsp peak18009 5 20401716 20402034 + TTS (AT5G50150.1) 4856 AT5G50150 AT5G50150 MPF21.18|MPF21_18 NEP-interacting protein, putative (DUF239) protein-coding SNsp peak18042 5 20560467 20561426 + exon (AT5G50490.1, exon 1 of 1) 282 AT5G50490 NF-YC5 ''nuclear factor Y|MBA10.4|MBA10_4|nuclear factor Y|subunit C5|subunit C5'' nuclear factor Y, subunit C5 protein-coding SNsp peak18050 5 20661345 20661752 + Intergenic -3547 AT5G50790 SWEET10 AtSWEET10|MFB16.26|MFB16_26 Nodulin MtN3 family protein protein-coding SNsp peak18051 5 20662931 20663223 + Intergenic 4235 AT5G50800 SWEET13 AtSWEET13|K7B16.1|K7B16_1 Nodulin MtN3 family protein protein-coding SNsp peak18052 5 20671478 20672378 + Intergenic -3294 AT5G50805 AT5G50805 67828.TRNA-GLN-1 tRNA tRNA SNsp peak18085 5 20819643 20820617 + promoter-TSS (AT5G51210.1) 62 AT5G51210 OLEO3 MWD22.16|MWD22_16|oleosin3 oleosin3 protein-coding SNsp peak18104 5 20917738 20919052 + exon (AT5G51500.1, exon 2 of 2) 1569 AT5G51500 AT5G51500 K17N15.5|K17N15_5 Plant invertase/pectin methylesterase inhibitor superfamily protein-coding SNsp peak18153 5 21183086 21183911 + intron (AT5G52130.1, intron 2 of 4) 377 AT5G52130 AT5G52130 F17P19.2|F17P19_2 hypothetical protein protein-coding SNsp peak18154 5 21184110 21184578 + promoter-TSS (AT5G52130.1) -469 AT5G52130 AT5G52130 F17P19.2|F17P19_2 hypothetical protein protein-coding SNsp peak18156 5 21188875 21190300 + TTS (AT5G52150.1) 1716 AT5G52150 AT5G52150 F17P19.5|F17P19_5 RING/U-box superfamily protein protein-coding SNsp peak18186 5 21369448 21370380 + promoter-TSS (AT5G52690.1) -585 AT5G52690 AT5G52690 F6N7.18|F6N7_18 Copper transport protein family protein-coding SNsp peak18187 5 21371582 21372240 + promoter-TSS (AT5G52700.1) -909 AT5G52700 AT5G52700 F6N7.19|F6N7_19 Copper transport protein family protein-coding SNsp peak18235 5 21590618 21591126 + Intergenic -1617 AT5G53210 SPCH MFH8.15|SPEECHLESS basic helix-loop-helix (bHLH) DNA-binding superfamily protein protein-coding SNsp peak18316 5 21976566 21977688 + promoter-TSS (AT5G54148.1) -23 AT5G54148 AT5G54148 - sarcosine dehydrogenase-2C protein protein-coding SNsp peak18347 5 22143701 22144395 + Intergenic 5254 AT5G54520 AT5G54520 MRB17.2|MRB17_2 Transducin/WD40 repeat-like superfamily protein protein-coding SNsp peak18346 5 22142410 22142858 + Intergenic 6668 AT5G54520 AT5G54520 MRB17.2|MRB17_2 Transducin/WD40 repeat-like superfamily protein protein-coding SNsp peak18349 5 22145513 22145909 + TTS (AT5G54520.1) 3591 AT5G54520 AT5G54520 MRB17.2|MRB17_2 Transducin/WD40 repeat-like superfamily protein protein-coding SNsp peak18348 5 22144592 22144839 + Intergenic 4587 AT5G54520 AT5G54520 MRB17.2|MRB17_2 Transducin/WD40 repeat-like superfamily protein protein-coding SNsp peak18486 5 22847743 22848618 + promoter-TSS (AT5G56400.1) -565 AT5G56400 AT5G56400 MCD7.16|MCD7_16 FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein protein-coding SNsp peak18532 5 23048615 23048888 + promoter-TSS (AT5G56970.2) -459 AT5G56970 CKX3 ATCKX3|CYTOKININ OXIDASE|MHM17.8|MHM17_8|cytokinin oxidase 3 cytokinin oxidase 3 protein-coding SNsp peak18552 5 23140904 23141810 + Intergenic -3590 AT5G57130 AT5G57130 MUL3.8|MUL3_8|SMAX1-like 5|SMXL5 Clp amino terminal domain-containing protein protein-coding SNsp peak18576 5 23253998 23254536 + exon (AT5G57390.2, exon 7 of 8) 1638 AT5G57390 AIL5 AINTEGUMENTA-like 5|CHO1|CHOTTO 1|EMBRYOMAKER|EMK|MSF19.5|MSF19_5|PLETHORA 5|PLT5 AINTEGUMENTA-like 5 protein-coding SNsp peak18584 5 23296819 23298453 + TTS (AT5G57520.1) 1984 AT5G57520 ZFP2 ATZFP2|MUA2.9|MUA2_9|ZINC FINGER PROTEIN 2|zinc finger protein 2 zinc finger protein 2 protein-coding SNsp peak18590 5 23333712 23334101 + promoter-TSS (AT5G57620.1) -861 AT5G57620 MYB36 AtMYB36|MUA2.20|MUA2_20|myb domain protein 36 myb domain protein 36 protein-coding SNsp peak18611 5 23404601 23406251 + exon (AT5G57780.1, exon 2 of 2) 1053 AT5G57780 P1R1 MTI20.1|MTI20_1 transcription factor protein-coding SNsp peak18647 5 23604105 23604402 + TTS (AT5G58400.1) 2792 AT5G58400 AT5G58400 MCK7.27|MCK7_27 Peroxidase superfamily protein protein-coding SNsp peak18708 5 23924091 23924687 + TTS (AT5G59305.1) 1188 AT5G59305 AT5G59305 - CLAVATA 3/ESR (CLE)-like protein protein-coding SNsp peak18710 5 23933136 23933728 + TTS (AT5G59340.1) 1618 AT5G59340 WOX2 MNC17.25|MNC17_25|WUSCHEL related homeobox 2 WUSCHEL related homeobox 2 protein-coding SNsp peak18916 5 24975627 24976352 + promoter-TSS (AT5G62170.1) -281 AT5G62170 TRM25 MTG10.21|MTG10_21|TON1 Recruiting Motif 25 LOW protein: M-phase inducer phosphatase-like protein protein-coding SNsp peak19140 5 26233906 26234096 + Intergenic -2963 AT5G65640 bHLH093 K21L13.16|K21L13_16|beta HLH protein 93 beta HLH protein 93 protein-coding SNsp peak14858 5 398220 398533 + exon (AT5G02030.1, exon 4 of 4) -1982 ENSRNA049 SNsp peak2075 1 11500217 11500406 + TTS (at1g06523) 927 ENSRNA049 SNsp