['orco/queries/AthaAT4G22270.fasta', 'orco/queries/AthaAT1G67570.fasta', 'orco/queries/DmelGr64a.fasta', 'orco/queries/MpusGRL1.fasta', 'orco/queries/VbraGRL5.fasta', 'orco/queries/TtraGRL4.fasta', 'orco/queries/TtraGRL6.fasta', 'orco/queries/SkowGRL1.fasta', 'orco/queries/TadhGRL1.fasta', 'orco/queries/AthaAT2G21080.fasta', 'orco/queries/VbraGRL4.fasta', 'orco/queries/AbakORCO.fasta', 'orco/queries/NvecGRL1.fasta', 'orco/queries/TtraGRL5.fasta', 'orco/queries/VbraGRL6.fasta', 'orco/queries/SpurGRL1.fasta', 'orco/queries/AthaAT4G03820.fasta', 'orco/queries/CpriGRL1.fasta', 'orco/queries/VbraGRL1.fasta', 'orco/queries/SpunGRL1.fasta', 'orco/queries/PfunGRL1.fasta', 'orco/queries/TtraGRL2.fasta', 'orco/queries/AthaAT1G50630.fasta', 'orco/queries/AthaAT3G20300.fasta', 'orco/queries/TtraGRL1.fasta', 'orco/queries/TtraGRL3.fasta', 'orco/queries/VbraGRL2.fasta', 'orco/queries/SpalGRL1.fasta', 'orco/queries/VbraGRL3.fasta']
['orco/queries/AthaAT4G22270.fasta', 'AthaAT4G22270Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/AthaAT4G22270.fasta -o orco/HHfiles/AthaAT4G22270ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/AthaAT4G22270ProfphyloORCO.hhm
['orco/queries/AthaAT1G67570.fasta', 'AthaAT1G67570Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/AthaAT1G67570.fasta -o orco/HHfiles/AthaAT1G67570ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/AthaAT1G67570ProfphyloORCO.hhm
['orco/queries/DmelGr64a.fasta', 'DmelGr64aProfphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/DmelGr64a.fasta -o orco/HHfiles/DmelGr64aProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/DmelGr64aProfphyloORCO.hhm
['orco/queries/MpusGRL1.fasta', 'MpusGRL1Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/MpusGRL1.fasta -o orco/HHfiles/MpusGRL1ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/MpusGRL1ProfphyloORCO.hhm
['orco/queries/VbraGRL5.fasta', 'VbraGRL5Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/VbraGRL5.fasta -o orco/HHfiles/VbraGRL5ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/VbraGRL5ProfphyloORCO.hhm
['orco/queries/TtraGRL4.fasta', 'TtraGRL4Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/TtraGRL4.fasta -o orco/HHfiles/TtraGRL4ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/TtraGRL4ProfphyloORCO.hhm
['orco/queries/TtraGRL6.fasta', 'TtraGRL6Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/TtraGRL6.fasta -o orco/HHfiles/TtraGRL6ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/TtraGRL6ProfphyloORCO.hhm
['orco/queries/SkowGRL1.fasta', 'SkowGRL1Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/SkowGRL1.fasta -o orco/HHfiles/SkowGRL1ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/SkowGRL1ProfphyloORCO.hhm
['orco/queries/TadhGRL1.fasta', 'TadhGRL1Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/TadhGRL1.fasta -o orco/HHfiles/TadhGRL1ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/TadhGRL1ProfphyloORCO.hhm
['orco/queries/AthaAT2G21080.fasta', 'AthaAT2G21080Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/AthaAT2G21080.fasta -o orco/HHfiles/AthaAT2G21080ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/AthaAT2G21080ProfphyloORCO.hhm
['orco/queries/VbraGRL4.fasta', 'VbraGRL4Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/VbraGRL4.fasta -o orco/HHfiles/VbraGRL4ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/VbraGRL4ProfphyloORCO.hhm
['orco/queries/AbakORCO.fasta', 'AbakORCOProfphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/AbakORCO.fasta -o orco/HHfiles/AbakORCOProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/AbakORCOProfphyloORCO.hhm
['orco/queries/NvecGRL1.fasta', 'NvecGRL1Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/NvecGRL1.fasta -o orco/HHfiles/NvecGRL1ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/NvecGRL1ProfphyloORCO.hhm
['orco/queries/TtraGRL5.fasta', 'TtraGRL5Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/TtraGRL5.fasta -o orco/HHfiles/TtraGRL5ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/TtraGRL5ProfphyloORCO.hhm
['orco/queries/VbraGRL6.fasta', 'VbraGRL6Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/VbraGRL6.fasta -o orco/HHfiles/VbraGRL6ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/VbraGRL6ProfphyloORCO.hhm
['orco/queries/SpurGRL1.fasta', 'SpurGRL1Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/SpurGRL1.fasta -o orco/HHfiles/SpurGRL1ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/SpurGRL1ProfphyloORCO.hhm
['orco/queries/AthaAT4G03820.fasta', 'AthaAT4G03820Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/AthaAT4G03820.fasta -o orco/HHfiles/AthaAT4G03820ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/AthaAT4G03820ProfphyloORCO.hhm
['orco/queries/CpriGRL1.fasta', 'CpriGRL1Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/CpriGRL1.fasta -o orco/HHfiles/CpriGRL1ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/CpriGRL1ProfphyloORCO.hhm
['orco/queries/VbraGRL1.fasta', 'VbraGRL1Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/VbraGRL1.fasta -o orco/HHfiles/VbraGRL1ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/VbraGRL1ProfphyloORCO.hhm
['orco/queries/SpunGRL1.fasta', 'SpunGRL1Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/SpunGRL1.fasta -o orco/HHfiles/SpunGRL1ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/SpunGRL1ProfphyloORCO.hhm
['orco/queries/PfunGRL1.fasta', 'PfunGRL1Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/PfunGRL1.fasta -o orco/HHfiles/PfunGRL1ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/PfunGRL1ProfphyloORCO.hhm
['orco/queries/TtraGRL2.fasta', 'TtraGRL2Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/TtraGRL2.fasta -o orco/HHfiles/TtraGRL2ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/TtraGRL2ProfphyloORCO.hhm
['orco/queries/AthaAT1G50630.fasta', 'AthaAT1G50630Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/AthaAT1G50630.fasta -o orco/HHfiles/AthaAT1G50630ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/AthaAT1G50630ProfphyloORCO.hhm
['orco/queries/AthaAT3G20300.fasta', 'AthaAT3G20300Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/AthaAT3G20300.fasta -o orco/HHfiles/AthaAT3G20300ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/AthaAT3G20300ProfphyloORCO.hhm
['orco/queries/TtraGRL1.fasta', 'TtraGRL1Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/TtraGRL1.fasta -o orco/HHfiles/TtraGRL1ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/TtraGRL1ProfphyloORCO.hhm
['orco/queries/TtraGRL3.fasta', 'TtraGRL3Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/TtraGRL3.fasta -o orco/HHfiles/TtraGRL3ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/TtraGRL3ProfphyloORCO.hhm
['orco/queries/VbraGRL2.fasta', 'VbraGRL2Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/VbraGRL2.fasta -o orco/HHfiles/VbraGRL2ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/VbraGRL2ProfphyloORCO.hhm
['orco/queries/SpalGRL1.fasta', 'SpalGRL1Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/SpalGRL1.fasta -o orco/HHfiles/SpalGRL1ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/SpalGRL1ProfphyloORCO.hhm
['orco/queries/VbraGRL3.fasta', 'VbraGRL3Profphylo', 'hhblits ', 'orco/HHfiles/', '/home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08', 3, 8, 'ORCO']
hhblits -cpu 8 -d /home/cactuskid13/mntpt/HHBLITsdb/uniclust30_2018_08/uniclust30_2018_08 -i orco/queries/VbraGRL3.fasta -o orco/HHfiles/VbraGRL3ProfphyloORCO.hhr -n 3 -B 2000 -Z 2000 -mact .5 -ohhm orco/HHfiles/VbraGRL3ProfphyloORCO.hhm