<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Archiving and Interchange DTD with MathML3 v1.2 20190208//EN"  "JATS-archivearticle1-mathml3.dtd"><article article-type="research-article" dtd-version="1.2" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" xmlns:xlink="http://www.w3.org/1999/xlink"><front><journal-meta><journal-id journal-id-type="nlm-ta">elife</journal-id><journal-id journal-id-type="publisher-id">eLife</journal-id><journal-title-group><journal-title>eLife</journal-title></journal-title-group><issn pub-type="epub" publication-format="electronic">2050-084X</issn><publisher><publisher-name>eLife Sciences Publications, Ltd</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">62760</article-id><article-id pub-id-type="doi">10.7554/eLife.62760</article-id><article-categories><subj-group subj-group-type="display-channel"><subject>Research Article</subject></subj-group><subj-group subj-group-type="heading"><subject>Developmental Biology</subject></subj-group></article-categories><title-group><article-title>Beneficial impacts of neuromuscular electrical stimulation on muscle structure and function in the zebrafish model of Duchenne muscular dystrophy</article-title></title-group><contrib-group><contrib contrib-type="author" id="author-205268"><name><surname>Kilroy</surname><given-names>Elisabeth A</given-names></name><xref ref-type="aff" rid="aff1">1</xref><xref ref-type="other" rid="fund1"/><xref ref-type="other" rid="fund2"/><xref ref-type="fn" rid="con1"/><xref ref-type="fn" rid="conf1"/></contrib><contrib contrib-type="author" id="author-256192"><name><surname>Ignacz</surname><given-names>Amanda C</given-names></name><xref ref-type="aff" rid="aff1">1</xref><xref ref-type="fn" rid="con2"/><xref ref-type="fn" rid="conf1"/></contrib><contrib contrib-type="author" id="author-208100"><name><surname>Brann</surname><given-names>Kaylee L</given-names></name><xref ref-type="aff" rid="aff2">2</xref><xref ref-type="fn" rid="con3"/><xref ref-type="fn" rid="conf1"/></contrib><contrib contrib-type="author" id="author-208101"><name><surname>Schaffer</surname><given-names>Claire E</given-names></name><xref ref-type="aff" rid="aff2">2</xref><xref ref-type="fn" rid="con4"/><xref ref-type="fn" rid="conf1"/></contrib><contrib contrib-type="author" id="author-208102"><name><surname>Varney</surname><given-names>Devon</given-names></name><xref ref-type="aff" rid="aff2">2</xref><xref ref-type="fn" rid="con5"/><xref ref-type="fn" rid="conf1"/></contrib><contrib contrib-type="author" id="author-256229"><name><surname>Alrowaished</surname><given-names>Sarah S</given-names></name><xref ref-type="aff" rid="aff2">2</xref><xref ref-type="fn" rid="con6"/><xref ref-type="fn" rid="conf1"/></contrib><contrib contrib-type="author" id="author-208103"><name><surname>Silknitter</surname><given-names>Kodey J</given-names></name><xref ref-type="aff" rid="aff1">1</xref><xref ref-type="fn" rid="con7"/><xref ref-type="fn" rid="conf2"/></contrib><contrib contrib-type="author" id="author-208104"><name><surname>Miner</surname><given-names>Jordan N</given-names></name><contrib-id authenticated="true" contrib-id-type="orcid">https://orcid.org/0000-0003-2998-3330</contrib-id><xref ref-type="aff" rid="aff3">3</xref><xref ref-type="fn" rid="con8"/><xref ref-type="fn" rid="conf1"/></contrib><contrib contrib-type="author" id="author-208107"><name><surname>Almaghasilah</surname><given-names>Ahmed</given-names></name><xref ref-type="aff" rid="aff1">1</xref><xref ref-type="fn" rid="con9"/><xref ref-type="fn" rid="conf1"/></contrib><contrib contrib-type="author" id="author-208105"><name><surname>Spellen</surname><given-names>Tashawna L</given-names></name><xref ref-type="aff" rid="aff2">2</xref><xref ref-type="fn" rid="con10"/><xref ref-type="fn" rid="conf1"/></contrib><contrib contrib-type="author" id="author-208106"><name><surname>Lewis</surname><given-names>Alexandra D</given-names></name><xref ref-type="aff" rid="aff2">2</xref><xref ref-type="fn" rid="con11"/><xref ref-type="fn" rid="conf1"/></contrib><contrib contrib-type="author" id="author-205277"><name><surname>Tilbury</surname><given-names>Karissa</given-names></name><xref ref-type="aff" rid="aff1">1</xref><xref ref-type="aff" rid="aff3">3</xref><xref ref-type="other" rid="fund3"/><xref ref-type="fn" rid="con12"/><xref ref-type="fn" rid="conf1"/></contrib><contrib contrib-type="author" id="author-205278"><name><surname>King</surname><given-names>Benjamin L</given-names></name><xref ref-type="aff" rid="aff1">1</xref><xref ref-type="aff" rid="aff4">4</xref><xref ref-type="other" rid="fund4"/><xref ref-type="fn" rid="con13"/><xref ref-type="fn" rid="conf1"/></contrib><contrib contrib-type="author" id="author-205279"><name><surname>Kelley</surname><given-names>Joshua B</given-names></name><xref ref-type="aff" rid="aff1">1</xref><xref ref-type="aff" rid="aff4">4</xref><xref ref-type="other" rid="fund5"/><xref ref-type="fn" rid="con14"/><xref ref-type="fn" rid="conf1"/></contrib><contrib contrib-type="author" corresp="yes" id="author-155802"><name><surname>Henry</surname><given-names>Clarissa A</given-names></name><contrib-id authenticated="true" contrib-id-type="orcid">https://orcid.org/0000-0001-7204-9231</contrib-id><email>clarissa.henry@maine.edu</email><xref ref-type="aff" rid="aff1">1</xref><xref ref-type="aff" rid="aff2">2</xref><xref ref-type="other" rid="fund6"/><xref ref-type="other" rid="fund7"/><xref ref-type="other" rid="fund8"/><xref ref-type="fn" rid="con15"/><xref ref-type="fn" rid="conf2"/></contrib><aff id="aff1"><label>1</label><institution-wrap><institution-id institution-id-type="ror">https://ror.org/01adr0w49</institution-id><institution>Graduate School of Biomedical Science and Engineering, University of Maine</institution></institution-wrap><addr-line><named-content content-type="city">Orono</named-content></addr-line><country>United States</country></aff><aff id="aff2"><label>2</label><institution-wrap><institution-id institution-id-type="ror">https://ror.org/01adr0w49</institution-id><institution>School of Biology and Ecology, University of Maine</institution></institution-wrap><addr-line><named-content content-type="city">Orono</named-content></addr-line><country>United States</country></aff><aff id="aff3"><label>3</label><institution-wrap><institution-id institution-id-type="ror">https://ror.org/01adr0w49</institution-id><institution>Department of Chemical and Biomedical Engineering, University of Maine</institution></institution-wrap><addr-line><named-content content-type="city">Orono</named-content></addr-line><country>United States</country></aff><aff id="aff4"><label>4</label><institution-wrap><institution-id institution-id-type="ror">https://ror.org/01adr0w49</institution-id><institution>Department of Molecular and Biomedical Sciences, University of Maine</institution></institution-wrap><addr-line><named-content content-type="city">Orono</named-content></addr-line><country>United States</country></aff></contrib-group><contrib-group content-type="section"><contrib contrib-type="editor"><name><surname>Dowling</surname><given-names>James J</given-names></name><role>Reviewing Editor</role><aff><institution-wrap><institution-id institution-id-type="ror">https://ror.org/04374qe70</institution-id><institution>The Hospital for Sick Children</institution></institution-wrap><country>Canada</country></aff></contrib><contrib contrib-type="senior_editor"><name><surname>Stainier</surname><given-names>Didier YR</given-names></name><role>Senior Editor</role><aff><institution-wrap><institution-id institution-id-type="ror">https://ror.org/0165r2y73</institution-id><institution>Max Planck Institute for Heart and Lung Research</institution></institution-wrap><country>Germany</country></aff></contrib></contrib-group><pub-date date-type="publication" publication-format="electronic"><day>24</day><month>03</month><year>2022</year></pub-date><pub-date pub-type="collection"><year>2022</year></pub-date><volume>11</volume><elocation-id>e62760</elocation-id><history><date date-type="received" iso-8601-date="2020-09-03"><day>03</day><month>09</month><year>2020</year></date><date date-type="accepted" iso-8601-date="2022-03-10"><day>10</day><month>03</month><year>2022</year></date></history><pub-history><event><event-desc>This manuscript was published as a preprint at bioRxiv.</event-desc><date date-type="preprint" iso-8601-date="2020-09-03"><day>03</day><month>09</month><year>2020</year></date><self-uri content-type="preprint" xlink:href="https://doi.org/10.1101/2020.09.02.279513"/></event></pub-history><permissions><copyright-statement>© 2022, Kilroy et al</copyright-statement><copyright-year>2022</copyright-year><copyright-holder>Kilroy et al</copyright-holder><ali:free_to_read/><license xlink:href="http://creativecommons.org/licenses/by/4.0/"><ali:license_ref>http://creativecommons.org/licenses/by/4.0/</ali:license_ref><license-p>This article is distributed under the terms of the <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution License</ext-link>, which permits unrestricted use and redistribution provided that the original author and source are credited.</license-p></license></permissions><self-uri content-type="pdf" xlink:href="elife-62760-v1.pdf"/><abstract><p>Neuromuscular electrical stimulation (NMES) allows activation of muscle fibers in the absence of voluntary force generation. NMES could have the potential to promote muscle homeostasis in the context of muscle disease, but the impacts of NMES on diseased muscle are not well understood. We used the zebrafish Duchenne muscular dystrophy (<italic>dmd</italic>) mutant and a longitudinal design to elucidate the consequences of NMES on muscle health. We designed four neuromuscular stimulation paradigms loosely based on weightlifting regimens. Each paradigm differentially affected neuromuscular structure, function, and survival. Only endurance neuromuscular stimulation (eNMES) improved all outcome measures. We found that eNMES improves muscle and neuromuscular junction morphology, swimming, and survival. Heme oxygenase and integrin alpha7 are required for eNMES-mediated improvement. Our data indicate that neuromuscular stimulation can be beneficial, suggesting that the right type of activity may benefit patients with muscle disease.</p></abstract><kwd-group kwd-group-type="author-keywords"><kwd>neuromuscular development</kwd><kwd>dystroglycanopathies</kwd><kwd>skeletal muscle</kwd></kwd-group><kwd-group kwd-group-type="research-organism"><title>Research organism</title><kwd>Zebrafish</kwd></kwd-group><funding-group><award-group id="fund1"><funding-source><institution-wrap><institution>Morgan Hoffman Foundation</institution></institution-wrap></funding-source><principal-award-recipient><name><surname>Kilroy</surname><given-names>Elisabeth A</given-names></name></principal-award-recipient></award-group><award-group id="fund2"><funding-source><institution-wrap><institution-id institution-id-type="FundRef">http://dx.doi.org/10.13039/100000001</institution-id><institution>National Science Foundation</institution></institution-wrap></funding-source><award-id>GRFP</award-id><principal-award-recipient><name><surname>Kilroy</surname><given-names>Elisabeth A</given-names></name></principal-award-recipient></award-group><award-group id="fund3"><funding-source><institution-wrap><institution-id institution-id-type="FundRef">http://dx.doi.org/10.13039/100011130</institution-id><institution>University of Maine</institution></institution-wrap></funding-source><award-id>Start up</award-id><principal-award-recipient><name><surname>Tilbury</surname><given-names>Karissa</given-names></name></principal-award-recipient></award-group><award-group id="fund4"><funding-source><institution-wrap><institution-id institution-id-type="FundRef">http://dx.doi.org/10.13039/100011130</institution-id><institution>University of Maine</institution></institution-wrap></funding-source><award-id>Seed Grant</award-id><principal-award-recipient><name><surname>King</surname><given-names>Benjamin L</given-names></name><name><surname>Henry</surname><given-names>Clarissa</given-names></name></principal-award-recipient></award-group><award-group id="fund5"><funding-source><institution-wrap><institution-id institution-id-type="FundRef">http://dx.doi.org/10.13039/100000002</institution-id><institution>National Institutes of Health</institution></institution-wrap></funding-source><award-id>R15 GM128026</award-id><principal-award-recipient><name><surname>Kelley</surname><given-names>Joshua B</given-names></name></principal-award-recipient></award-group><award-group id="fund6"><funding-source><institution-wrap><institution-id institution-id-type="FundRef">http://dx.doi.org/10.13039/100000001</institution-id><institution>National Science Foundation</institution></institution-wrap></funding-source><award-id>MRI 1726541</award-id><principal-award-recipient><name><surname>Henry</surname><given-names>Clarissa</given-names></name></principal-award-recipient></award-group><award-group id="fund7"><funding-source><institution-wrap><institution-id institution-id-type="FundRef">http://dx.doi.org/10.13039/100000002</institution-id><institution>National Institutes of Health</institution></institution-wrap></funding-source><award-id>RO1 AR075836</award-id><principal-award-recipient><name><surname>Henry</surname><given-names>Clarissa</given-names></name></principal-award-recipient></award-group><award-group id="fund8"><funding-source><institution-wrap><institution-id institution-id-type="FundRef">http://dx.doi.org/10.13039/100000002</institution-id><institution>National Institutes of Health</institution></institution-wrap></funding-source><award-id>R15 HD99018-01</award-id><principal-award-recipient><name><surname>Henry</surname><given-names>Clarissa</given-names></name></principal-award-recipient></award-group><funding-statement>The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.</funding-statement></funding-group><custom-meta-group><custom-meta specific-use="meta-only"><meta-name>Author impact statement</meta-name><meta-value>Depending upon the parameters used, neuromuscular stimulation can have beneficial or deleterious impacts on muscle structure and function in an animal model of Duchenne muscular dystrophy.</meta-value></custom-meta></custom-meta-group></article-meta></front><body><sec id="s1" sec-type="intro"><title>Introduction</title><p>Skeletal muscle is a dynamic tissue whose structural and molecular networks change in response to demand. Skeletal muscle’s ability to adapt is critical to maintaining not only muscle health, but also the overall health of an individual. Skeletal muscle is one of the primary predictors of longevity and recovery from illness and injury, demonstrating that robust skeletal muscle mass is essential for whole-body homeostasis (<xref ref-type="bibr" rid="bib69">Margolis and Rivas, 2015</xref>). Whereas a great deal is known about the structural and functional plasticity of healthy skeletal muscle, far less is understood about plasticity and adaptation in diseased muscle. Muscular dystrophies are debilitating progressive diseases without cures. Here, we describe how neuromuscular electrical stimulation (NMES) impacts the zebrafish model of Duchenne muscular dystrophy (DMD).</p><p>Individuals with DMD harbor mutations in the gene encoding the protein dystrophin (<xref ref-type="bibr" rid="bib48">Hoffman et al., 1987</xref>). Dystrophin provides a link between the actin cytoskeleton and the extracellular matrix (ECM) and serves as a scaffold for the assembly of the dystrophin-glycoprotein complex (DGC) within the sarcolemma (muscle plasma membrane) (<xref ref-type="bibr" rid="bib12">Bonilla et al., 1988</xref>; <xref ref-type="bibr" rid="bib34">Ervasti and Campbell, 1991</xref>). The stability and integrity of the ECM and DGC are critical to the viability of muscle fibers during contraction. The ECM modulates mechanical homeostasis and cell-matrix interactions (<xref ref-type="bibr" rid="bib45">Grzelkowska-Kowalczyk, 2016</xref>; <xref ref-type="bibr" rid="bib52">Humphrey et al., 2014</xref>). ECM-mediated distribution and transmission of force across muscle fibers are mostly achieved through the ECM-cytoskeleton linkage via the DGC (<xref ref-type="bibr" rid="bib52">Humphrey et al., 2014</xref>; <xref ref-type="bibr" rid="bib79">Ramaswamy et al., 2011</xref>). The DGC maintains the structural integrity of the sarcolemma and serves as a scaffold for various signaling and channel proteins as well as an anchoring point for signaling molecules near their sites of action (<xref ref-type="bibr" rid="bib25">Constantin, 2014</xref>). The progressive muscle wasting and weakness in DMD is thought to result at least in part because the lack of dystrophin and the disruption of the DGC mechanically weaken the sarcolemma. Stress placed on a mechanically weakened sarcolemma causes microlesions to develop along the sarcolemma, increasing calcium entry, which results in muscle protein degradation and muscle fiber necrosis (<xref ref-type="bibr" rid="bib2">Alderton and Steinhardt, 2000</xref>; <xref ref-type="bibr" rid="bib38">Gailly, 2002</xref>; <xref ref-type="bibr" rid="bib40">Gillis, 1996</xref>; <xref ref-type="bibr" rid="bib82">Ruegg et al., 2002</xref>). Given the role that the DGC plays in muscle during force generation and the concern about potentially increased muscle damage, there has been interest in studying the effects of activity on the progression of muscle disease in humans. However, studies tend to be small with heterogeneous populations and a clear answer has not yet been established (<xref ref-type="bibr" rid="bib3">Alemdaroğlu et al., 2015</xref>; <xref ref-type="bibr" rid="bib18">Bushby et al., 2010</xref>; <xref ref-type="bibr" rid="bib39">Gianola et al., 2013</xref>; <xref ref-type="bibr" rid="bib53">Hyzewicz et al., 2015</xref>; <xref ref-type="bibr" rid="bib54">Jansen et al., 2013</xref>; <xref ref-type="bibr" rid="bib71">Markert et al., 2012</xref>). The lack of a clear answer is because these studies vary with regards to exercise regimes, controls (contralateral limbs versus different subjects), time frames of treatments, outcome measures, and conclusions. For example, one study conducted in 1966 concluded that a resistance exercise program is most effective at increasing strength if instituted early in the disease, and a study conducted in 1981 concluded that resistance exercise negatively affects walking (<xref ref-type="bibr" rid="bib84">Scott et al., 1981</xref>; <xref ref-type="bibr" rid="bib91">Vignos and Watkins, 1966</xref>). More recent studies have not examined resistance training but do suggest that bicycle ergometers can positively affect the quality of life early in the disease course (<xref ref-type="bibr" rid="bib3">Alemdaroğlu et al., 2015</xref>; <xref ref-type="bibr" rid="bib54">Jansen et al., 2013</xref>). Unfortunately, studies using the <italic>mdx</italic> mouse to study the impact of exercise on disease progression also take different approaches – treadmill training, voluntary wheel running, swimming, rotarod training – beginning at 3–96 weeks, leading to disparate results. Collectively, studies demonstrate either improvements in twitch tension, decreased necrosis, antioxidant capacities, and oxidative enzyme activity (<xref ref-type="bibr" rid="bib6">Baltgalvis et al., 2012</xref>; <xref ref-type="bibr" rid="bib19">Call et al., 2008</xref>; <xref ref-type="bibr" rid="bib51">Hulmi et al., 2013</xref>); or reduced strength, increased edema and inflammation, increases in reactive oxygen species, and increases in lipid peroxidation (<xref ref-type="bibr" rid="bib15">Burdi et al., 2009</xref>; <xref ref-type="bibr" rid="bib35">Faist et al., 2001</xref>; <xref ref-type="bibr" rid="bib58">Kobayashi et al., 2012</xref>). Most of these studies measured specific outcomes on individual muscles of the hindlimb, diaphragm, or heart. These muscles are not equally affected by the absence of dystrophin (<xref ref-type="bibr" rid="bib63">Louboutin et al., 1993</xref>) and thus likely to respond differently to exercise. Taken together, these data clearly indicate that the impact of exercise on the progression of DMD is not very well characterized.</p><p>Skeletal muscle fibers are influenced by the activity pattern imposed upon them, whether the activity is from the innervating neuron or electrical stimulation (<xref ref-type="bibr" rid="bib78">Pette and Vrbová, 1985</xref>). Early researchers, including Guillaume Benjamin Amand Duchenne, the French neurologist who described DMD in 1861, proposed that super-imposing electrical stimulation on dystrophin-deficient muscles could serve as a potential therapy (<xref ref-type="bibr" rid="bib7">Barnard et al., 1986</xref>; <xref ref-type="bibr" rid="bib33">Duchenne, 1870</xref>; <xref ref-type="bibr" rid="bib80">Reichmann et al., 1981</xref>). NMES delivers a series of waveforms of electrical current that is characterized by its frequency, amplitude, and pulse width (or pulse duration) (<xref ref-type="bibr" rid="bib87">Sheffler and Chae, 2007</xref>). These three parameters dictate the strength of the muscle contraction and the amount of force that is generated. The main advantage of NMES is its ability to activate fast- and slow-twitch muscle fibers, resulting in hypertrophy without high-effort voluntary force generation (<xref ref-type="bibr" rid="bib41">Gondin et al., 2011</xref>). It is possible that NMES could impact muscle deterioration in congenital muscular dystrophies. However, only a few studies have examined the impact of NMES on muscle strength and function in humans (<xref ref-type="bibr" rid="bib86">Scott et al., 1990</xref>; <xref ref-type="bibr" rid="bib85">Scott et al., 1986</xref>; <xref ref-type="bibr" rid="bib99">Zupan, 1992</xref>; <xref ref-type="bibr" rid="bib100">Zupan et al., 1993</xref>) and the <italic>mdx</italic> mouse model of DMD (<xref ref-type="bibr" rid="bib27">Dangain and Vrbova, 1989</xref>; <xref ref-type="bibr" rid="bib66">Luthert et al., 1980</xref>; <xref ref-type="bibr" rid="bib93">Vrbová and Ward, 1981</xref>). The only clear conclusion from these studies is that NMES does not appear to be detrimental.</p><p>Zebrafish are an attractive model to elucidate the consequences of NMES on diseased muscle. Many molecular, ultrastructural, and histological features are shared between zebrafish and human muscle, including components of the DGC, the excitation-contraction coupling machinery, and the contractile apparatus (<xref ref-type="bibr" rid="bib30">Dou et al., 2008</xref>; <xref ref-type="bibr" rid="bib32">Dowling et al., 2009</xref>; <xref ref-type="bibr" rid="bib46">Guyon et al., 2003</xref>; <xref ref-type="bibr" rid="bib76">Parsons et al., 2002</xref>). Further, zebrafish exhibit reproducible, quantitative motor behaviors beginning at 1 day post-fertilization (dpf) (<xref ref-type="bibr" rid="bib83">Saint-Amant and Drapeau, 1998</xref>), providing simple and noninvasive measures of muscle function. Dystrophin-deficient zebrafish, known as sapje<sup>ta222a/ta222a</sup>, and referred here as <italic>dmd</italic> mutants, are the smallest vertebrate model of DMD. These <italic>dmd</italic> mutants exhibit severe structural and functional deficits by 4 dpf, and die prematurely between their second and third weeks (<xref ref-type="bibr" rid="bib8">Bassett et al., 2003</xref>; <xref ref-type="bibr" rid="bib9">Berger et al., 2010</xref>).</p><p>The purpose of this study was to use a longitudinal study design to evaluate the impacts of NMES on disease progression in <italic>dmd</italic> mutant zebrafish. Different NMES programs that varied in pulse frequency and voltage had differing effects on muscle structure, neuromuscular junction (NMJ) structure, motility, and life span. We did identify one program that improved all of the above. This program also increased the resilience of muscle fibers to high-force contraction, increased sarcomere length, and improved nuclear morphology. Deep sequencing indicated that, at least 3 days after exercise, transcriptional changes likely did not drive the improvement. However, deep sequencing did identify a couple of candidate mechanisms that were tested further. Heme oxygenase signaling and integrin alpha7 (Itga7) play roles in endurance NMES (eNMES)-mediated improvement. Taken together, our results show that NMES can have a dramatic positive impact on <italic>dmd</italic> muscle and establish the zebrafish as an excellent model for longitudinal studies that are critical for elucidating the basic mechanisms of skeletal muscle plasticity.</p></sec><sec id="s2" sec-type="results"><title>Results</title><sec id="s2-1"><title>A model for studying the impact of NMES on <italic>dmd</italic> muscle</title><p>Strength training is an excellent approach to combat muscle wasting and weakness in healthy individuals. Using zebrafish larvae as a model for lifting weights is not feasible, so we asked whether we could use NMES as an alternate means to stimulate muscle activity and combat muscle wasting and weakness in <italic>dmd</italic> larvae. Previous work used NMES as a controlled stimulus designed to illuminate the fact that muscle that appeared morphologically normal was highly susceptible to stimulation-induced injury (<xref ref-type="bibr" rid="bib90">Subramanian and Schilling, 2014</xref>). We approached NMES from the opposite perspective and asked whether different NMES paradigms would have different impacts on neuromuscular stability in <italic>dmd</italic> larvae. The parameters that can be adjusted in NMES include pulse frequency and voltage. We designed four different NMES paradigms ranging from high-frequency/low-voltage pulse trains to lower-frequency/higher-voltage pulse trains (<xref ref-type="fig" rid="fig1">Figure 1B and C</xref>). In order to easily differentiate these paradigms from each other, and because they were conceptually based on strength training paradigms that vary in the number of repetitions and load, we named these paradigms endurance NMES (eNMES), hypertrophy NMES (hNMES), strength NMES (sNMES), and power NMES (pNMES). We first asked whether these different NMES paradigms elicited unique tail bend patterns that vary in how many times the tail bends as well as how hard it bends. As would be expected, eNMES with high-frequency/low-voltage pulse trains elicited a fast but subtle tail beat. Conversely, with pNMES, the tail beat infrequently but bent to a much greater degree (<xref ref-type="video" rid="video1">Video 1</xref>).</p><fig id="fig1" position="float"><label>Figure 1.</label><caption><title>Four neuromuscular electrical stimulation (NMES) paradigms do not result in immediate damage to the sarcolemma.</title><p>(<bold>A</bold>) Experimental overview. At 2 days post-fertilization (dpf), WT siblings and <italic>dmd</italic> mutants were injected with Evans blue dye (EBD). 4 hr later, zebrafish were imaged for birefringence and EBD before and after a single session of NMES. (<bold>B</bold>) For NMES, zebrafish are placed in a 3D-printed gym with their heads towards the positive electrode and tails towards the negative electrode. (<bold>C, D</bold>) NMES delivers a series of square wave pulses that vary in frequency and voltage. We named these paradigms after weightlifting regimes. (<bold>E–J</bold>) Anterior left, dorsal top, side-mounted birefringence, and EBD fluorescent images. Yellow asterisks denote the same position in embryos before and after NMES. (<bold>E</bold>) WT sibling control exhibits healthy muscle segments (<bold>E1, E2</bold>) and no dye entry in the muscle (<bold>E1’, E2’</bold>) during the first and second imaging sessions. (<bold>F</bold>) <italic>dmd</italic> mutant control has significant areas of degenerated muscle (<bold>F1</bold>) and dye entry (<bold>F1’</bold>) but no new areas of degeneration or dye entry during the second imaging session (<bold>F2, F2’</bold>). (<bold>G–J</bold>) Similar to the <italic>dmd</italic> mutant control, <italic>dmd</italic> mutants that receive NMES have significant areas of degenerated muscle and dye entry prior to NMES but no new areas of degeneration or dye entry during following NMES. (<bold>K</bold>) Quantification of EBD during the first and second imaging sessions.</p></caption><graphic mime-subtype="tiff" mimetype="image" xlink:href="elife-62760-fig1-v1.tif"/></fig><media id="video1" mime-subtype="mp4" mimetype="video" xlink:href="elife-62760-video1.mp4"><label>Video 1.</label><caption><title>Video of embryos undergoing different electrostimulation paradigms.</title><p>The paradigms are noted in the video.</p></caption></media></sec><sec id="s2-2"><title>NMES does not result in immediate damage to the sarcolemma</title><p>One of the major reasons why strength training is not recommended for individuals with DMD is due to the fragility of the sarcolemma and its susceptibility to contraction-induced damage. Prior to evaluating each NMES paradigm, we asked whether the pulse parameters resulted in dramatic immediate damage to the sarcolemma. We did this by asking whether increased Evans blue dye (EBD) was observed in muscle after one session of NMES. EBD was injected into the pericardial space at 2 dpf and allowed to circulate for 4 hr. Then, images of EBD in the zebrafish trunk musculature were taken immediately prior to and after one session of NMES (<xref ref-type="fig" rid="fig1">Figure 1A</xref>). The relative amount of EBD in muscle was calculated using mean gray values of the EBD channel prior to and after NMES. Birefringence and EBD images of the same embryos before and after NMES are shown in <xref ref-type="fig" rid="fig1">Figure 1</xref>. The yellow stars denote the same position in the embryo before and after stimulation. Both wild-type (WT) and <italic>dmd</italic> mutant larvae are similar when imaged prior to and after NMES (<xref ref-type="fig" rid="fig1">Figure 1E–J</xref>). None of the NMES paradigms consistently caused a dramatic change in either birefringence (not shown) or EBD infiltration (<xref ref-type="fig" rid="fig1">Figure 1K</xref>, n = 5 embryos imaged, subjected to NMES, and imaged). These results indicated that the four NMES paradigms did not cause immediate dramatic damage to the sarcolemma.</p></sec><sec id="s2-3"><title>Different NMES paradigms differentially impact <italic>dmd</italic> muscle structure, function, and survival</title><p>After determining that NMES paradigms did not cause immediate dramatic damage, we asked whether different NMES programs had different effects on the progression of muscle degeneration in <italic>dmd</italic> larvae. We developed a protocol that was divided into two periods: the training period and the recovery period (<xref ref-type="fig" rid="fig2">Figure 2A</xref>). During the training period, zebrafish completed three sessions of NMES, each session lasting 1 min, on three consecutive days (2, 3, and 4 dpf) at the same time each day. Following these three training days, zebrafish entered the recovery period (5, 6, 7, and 8 dpf). The only aspects that changed across these experiments were the NMES pulse parameters. We used a longitudinal study design to elucidate the response of individual larvae to these different NMES paradigms.</p><fig id="fig2" position="float"><label>Figure 2.</label><caption><title>Impacts of neuromuscular electrical stimulation (NMES) paradigms on muscle structure through time.</title><p>(<bold>A</bold>) Experimental overview and calculation of change in mean gray value from 5 to 8 days post-fertilization (dpf). At 2 dpf, birefringence images were taken followed by the first session of NMES. At 3 and 4 dpf, zebrafish underwent the second and third sessions of NMES, respectively. Birefringence images were taken at 5 and 8 dpf. The training program was divided into the training period (2–4 dpf) and the recovery period (5–8 dpf). (<bold>B–E</bold>) Anterior left, dorsal top, side-mounted birefringence images for WT sibling controls (panels labeled 1), control <italic>dmd</italic> mutants (two examples shown, panels labeled 2 and 3), and NMES-treated <italic>dmd</italic> mutants (two examples shown, panels labeled 4 and 5). The NMES regimens are labeled as such: panels labeled <bold>B </bold>were treated with power NMES (pNMES), panels labeled <bold>C </bold>were treated with strength NMES (sNMES), panels labeled <bold>D </bold>were treated with hypertrophy NMES (hNMES), and panels labeled <bold>E </bold>were treated with endurance NMES (eNMES). The change in mean gray values from 5 dpf to 8 dpf represents how the muscle responds to and recovers from three sessions of NMES and is shown in panels labeled 6. Positive changes indicate improvements in muscle structure while negative changes indicate deterioration in muscle structure. Red arrowheads denote degeneration from the previous time point, green arrowheads denote regeneration from the previous time point. pNMES (<bold>B6</bold>, maroon squares) and eNMES (<bold>E6</bold>, blue squares) significantly improve muscle structure in <italic>dmd</italic> mutants compared to <italic>dmd</italic> mutant controls (gray circles). sNMES (<bold>C6</bold>, purple squares) significantly worsens muscle structure in <italic>dmd</italic> mutants while hNMES (<bold>D6</bold>, green squares) trends to decrease muscle structure compared to <italic>dmd</italic> mutant controls (gray circles). Each data point represents a single zebrafish. Birefringence data were analyzed using two-sided <italic>t</italic>-tests. *p&lt;0.05, **p&lt;0.01.</p></caption><graphic mime-subtype="tiff" mimetype="image" xlink:href="elife-62760-fig2-v1.tif"/></fig><p>WT larvae with all four NMES paradigms were unaffected (<xref ref-type="fig" rid="fig2">Figure 2B1, C1, D1, E1</xref>, and data not shown). There is some variability in the <italic>dmd</italic> phenotype. Thus, two examples of control and treated larvae are shown for each condition with all larvae quantified in panels labeled 6. For this figure, red arrowheads denote degeneration from the previous time point and green arrowheads denote improvement (either regeneration or hypertrophy) from the previous time point. We focused on the change in mean gray value from 5 dpf to 8 dpf because that change represents how the muscle responds to and recovers from three sessions of NMES. Between days 5 and 8, birefringence levels for control larvae trend towards slight improvement (<xref ref-type="fig" rid="fig2">Figure 2B6, C6, D6, E6</xref>). The eNMES and pNMES paradigms improved muscle structure in <italic>dmd</italic> mutants. pNMES resulted in a slight but significant increase in birefringence compared to controls (n = 32 control, n = 36 pNMES; p=0.0462; two biological replicates) (<xref ref-type="fig" rid="fig2">Figure 2B6</xref>, note also green arrows in <xref ref-type="fig" rid="fig2">Figure 2B4, B5</xref>). eNMES also increased regeneration between 5 and 8 dpf (n = 66 control, n = 66 eNMES; p=0.0037; five biological replicates) (<xref ref-type="fig" rid="fig2">Figure 2E6</xref>, note green arrows in <xref ref-type="fig" rid="fig2">Figure 2E4, E5</xref>). In contrast, <italic>dmd</italic> mutants that underwent sNMES exhibited significantly lower changes in mean gray values compared to control <italic>dmd</italic> mutants (n = 49 control, n = 47 sNMES; p=0.0302; two biological replicates) (<xref ref-type="fig" rid="fig2">Figure 2C6</xref>) while hNMES trended towards lowering birefringence (n = 38 control, n = 48 hNMES; p=0.1322; two biological replicates) (<xref ref-type="fig" rid="fig2">Figure 2D6</xref>). These data indicate that different NMES paradigms do have different effects on muscle structure in zebrafish larvae.</p><p>Birefringence provides a gross overview of muscle structure. Phalloidin stains filamentous actin and provides a finer assessment of muscle structure. Muscle fibers in WT zebrafish are highly organized and linear (<xref ref-type="fig" rid="fig3">Figure 3A</xref>). In contrast, many fibers in <italic>dmd</italic> mutants are thinner, wavy, and disorganized (<xref ref-type="fig" rid="fig3">Figure 3B</xref>, red arrows). Some fibers are also clearly degenerated and detached from their surrounding matrix (<xref ref-type="fig" rid="fig3">Figure 3C1, D1, E1</xref>, red arrowheads). We quantified the percentage of muscle segments with fiber degeneration. Neither sNMES nor hNMES affected the frequency of muscle fiber degeneration (<xref ref-type="fig" rid="fig3">Figure 3D2, E2</xref>). However, similar to the results observed with birefringence, eNMES (n = 22 control, n = 18 eNMES; p=0.0191; one biological replicate) and pNMES (n = 12 control, n = 20 pNMES; p=0.0033; one biological replicate) resulted in fewer fibers degenerating compared to control <italic>dmd</italic> mutants (<xref ref-type="fig" rid="fig3">Figure 3C2, F2</xref>). Taken together, the above data indicate that eNMES and pNMES improve muscle structure in <italic>dmd</italic> larvae.</p><fig id="fig3" position="float"><label>Figure 3.</label><caption><title>Impacts of neuromuscular electrical stimulation (NMES) paradigms on muscle fiber structure and degeneration.</title><p>Phalloidin staining for F-actin at 8 days post-fertilization (dpf) allows for visualization of individual muscle fibers and the ability to count detached fibers in <italic>dmd</italic> mutants. Anterior left, dorsal top, side mounted. Red arrows point to disorganized muscle fibers, and red arrowheads point to detached muscle fibers. (<bold>A</bold>) Representative image of WT sibling demonstrates organized muscle fibers with well-defined myotome boundaries. (<bold>B</bold>) Representative image of <italic>dmd</italic> mutants demonstrates disorganized, wavy muscle fibers with poorly defined myotome boundaries and empty space between individual muscle fibers. (<bold>C1</bold>) Representative image of <italic>dmd</italic> mutant that received power NMES (pNMES) demonstrates less muscle fiber waviness, lack of empty space between muscle fibers but visible detached fibers. (<bold>D1</bold>) Representative image of <italic>dmd</italic> mutant that received strength NMES (sNMES) demonstrates massive deterioration of muscle fiber structure, disorganized myotomes with poorly defined boundaries. (<bold>E1</bold>) Representative image of <italic>dmd</italic> mutant that received hypertrophy NMES (hNMES) demonstrates improved muscle fiber organization with more defined myotome boundaries but visibly detached muscle fibers and empty space between fibers. (<bold>F1</bold>) Representative image of <italic>dmd</italic> mutant that received endurance NMES (eNMES) demonstrates healthy myotomes with clearly defined boundaries, organized muscle fibers with very few wavy fibers, and lack of empty space between fibers. Quantification of the percentage of muscle segments with detachments indicates that pNMES (<bold>C2</bold>) and eNMES (<bold>F2</bold>) significantly reduce fiber detachments in <italic>dmd</italic> mutants. sNMES (<bold>D2</bold>) and hNMES (<bold>E2</bold>) do not impact the percent of muscle segments with detachments. Each data point represents a single fish. A muscle segment is defined as half of a myotome. Muscle detachment data were analyzed using two-sided <italic>t</italic>-tests. *p&lt;0.05, **p&lt;0.01. Scale bar is 50 µm.</p></caption><graphic mime-subtype="tiff" mimetype="image" xlink:href="elife-62760-fig3-v1.tif"/></fig><p>The NMJ is altered in DMD patients and animal models for DMD (<xref ref-type="bibr" rid="bib73">Ng and Ljubicic, 2020</xref>). To our knowledge, NMJ morphology has not been investigated in the zebrafish model for <italic>dmd</italic>. We thus strove to characterize NMJs in <italic>dmd</italic> larvae and then asked whether NMJ morphology changed with NMES. We analyzed NMJ morphology by using the SV2 antibody to label presynaptic structures and alpha-bungarotoxin to stain postsynaptic AChR. We focused on analyzing fast-twitch muscle fiber innervation, which is called distributed innervation (the rich network of NMJs, <xref ref-type="fig" rid="fig4">Figure 4A</xref>, yellow arrow, in between the chevron-shaped slow-twitch muscle innervation at the myotendinous junctions [MTJs], <xref ref-type="fig" rid="fig4">Figure 4A</xref>, yellow arrowhead). Note that there are many spiderweb-like NMJs throughout the segments in WT larvae (<xref ref-type="fig" rid="fig4">Figure 4A</xref>). In contrast, there are fewer NMJs in <italic>dmd</italic> mutants (<xref ref-type="fig" rid="fig4">Figure 4B</xref>). Analysis was done in a semi-automated fashion that involved skeletonizing the NMJs as previously described (<xref ref-type="bibr" rid="bib5">Bailey et al., 2019</xref>). pNMES did not change the number or length of skeletons (<xref ref-type="fig" rid="fig4">Figure 4C</xref>). sNMES increased the number of skeletons (<xref ref-type="fig" rid="fig4">Figure 4D</xref>) (n = 18 control, n = 20 sNMES; p=0.0395; one biological replicate). Both hNMES (<xref ref-type="fig" rid="fig4">Figure 4E</xref>) and eNMES (<xref ref-type="fig" rid="fig4">Figure 4F</xref>) did not increase the number of skeletons but increased skeleton length (n = 15 control, n = 23 hNMES, p=0.0036; n = 18 control, n = 15 eNMES, p=0.0278; one biological replicate). Thus, all NMES paradigms, other than pNMES, improved the number or length of NMJs compared to control <italic>dmd</italic> mutants.</p><fig id="fig4" position="float"><label>Figure 4.</label><caption><title>Impacts of neuromuscular electrical stimulation (NMES) paradigms on neuromuscular junction (NMJ) structure.</title><p>Anti-SV2 (cyan) alpha-bungarotoxin (AChR; magenta) visualize the pre- and postsynaptic components of the NMJ, respectively. (<bold>A</bold>) Representative image of WT sibling. Myoseptal innervation, innervation at the chevron-shaped myotendinous junction (yellow arrowhead) is slow-twitch innervation. Fast-twitch muscle innervation is the network between the MTJs, yellow arrow points to fast-twitch muscle innervation. (<bold>B</bold>) Representative image of <italic>dmd</italic> mutant demonstrates a visible reduction in innervation, with relatively large portions of the muscle segments lacking innervation. (<bold>C1, D1, E1</bold>, <bold>F6</bold>) Representative images of <italic>dmd</italic> mutants that completed three sessions of the NMES paradigms. NMJ images were skeletonized as previously described. Strength NMES(sNMES) was the only paradigm that increased the number of skeletons (<bold>D2</bold>). Both hypertrophy NMES (hNMES) and endurance NMES (eNMES) increase skeleton length (<bold>E3, F3</bold>). Power NMES did not change the number or length of skeletons compared to <italic>dmd</italic> mutant controls (<bold>C2,3</bold>). Scale bar is 50 µm. NMJ data were analyzed using either an ordinary one-way ANOVA with Tukey’s multiple comparisons test or a Kruskal–Wallis test with Dunn’s multiple-comparison test. **p&lt;0.01, ***p&lt;0.001, ****p&lt;0.0001.</p></caption><graphic mime-subtype="tiff" mimetype="image" xlink:href="elife-62760-fig4-v1.tif"/></fig><p>The data presented thus far indicate that only eNMES improves both muscle and NMJ structure. We hypothesized that this improved neuromuscular structure would correlate with improved function. We tested this hypothesis by assessing swim activity as a gross readout of muscle function. Swim activity was tested using DanioVision (Noldus Information Technology). Swimming activity was recorded for 25 min with alternating 5 min light/dark periods. As predicted, eNMES was the only NMES paradigm that resulted in both increased distance (n = 7 control, n = 11 eNMES; p&lt;0.0001; one biological replicate) and increased mean velocity (n = 7 control, n = 11 eNMES; p&lt;0.0001; one biological replicate) compared to control <italic>dmd</italic> larvae (<xref ref-type="fig" rid="fig5">Figure 5A4, B4</xref>). pNMES negatively affected swimming activity (for both total distance and mean velocity: n = 20 control, n = 19 pNMES; p&lt;0.0001; one biological replicate) (<xref ref-type="fig" rid="fig5">Figure 5A1,B1</xref>) despite having improved muscle structure. sNMES also significantly reduced total distance (n = 26 control, n = 23 sNMES; p&lt;0.0001; one biological replicate) and mean velocity (n = 26 control, n = 23 sNMES; p&lt;0.0001; one biological replicate) (<xref ref-type="fig" rid="fig5">Figure 5A2, B2</xref>) while hNMES did not affect these two measures (n = 20 control, n = 25 hNMES; p=0.1353 for total distance; p=0.1951 for mean velocity; one biological replicate) (<xref ref-type="fig" rid="fig5">Figure 5A3, B3</xref>).</p><fig id="fig5" position="float"><label>Figure 5.</label><caption><title>Impacts of neuromuscular electrical stimulation (NMES) paradigms on swimming.</title><p>DanioVision was used to assess the impact of NMES on total distance (<bold>A</bold>) and (<bold>B</bold>) mean velocity. Measurements were made at 8 days post-fertilization (dpf). (<bold>A1, B1</bold>) <italic>dmd</italic> mutants that completed power NMES (pNMES) exhibited significant reductions in total distance and mean velocity compared to <italic>dmd</italic> mutants in the control group. (<bold>A2, B2</bold>) Strength NMES also negatively affected swimming activity in <italic>dmd</italic> mutants compared to control <italic>dmd</italic> mutants. (<bold>A3, B3</bold>) No change in total distance or mean velocity is observed following hypertrophy NMES (hNMES). (<bold>A4, B4</bold>) <italic>dmd</italic> mutants that completed endurance NMES (eNMES) swam a significantly greater total distance and at a significantly faster mean velocity compared to <italic>dmd</italic> mutants in the control group. Each data point represents a single time point for an individual zebrafish. Each zebrafish has a total of 15 points. DanioVision data were analyzed using two-sided <italic>t</italic>-tests. **p&lt;0.01, ***p&lt;0.001, ****p&lt;0.0001.</p></caption><graphic mime-subtype="tiff" mimetype="image" xlink:href="elife-62760-fig5-v1.tif"/></fig><p>Lastly, survival was tracked in <italic>dmd</italic> mutants treated with NMES. Survival checks were performed twice daily. Three sessions of eNMES (n = 32 control, n = 37 eNMES; p&lt;0.0001; two biological replicates), sNMES (n = 63 control, n = 55 sNMES; p=0.0004; two biological replicates), and pNMES (n = 37 control, n = 32 pNMES; p=0.0414; one biological replicate) slightly but significantly extended the median age of survival for <italic>dmd</italic> mutants compared to unstimulated <italic>dmd</italic> mutants (<xref ref-type="fig" rid="fig6">Figure 6A, B and D</xref>); with eNMES having the largest beneficial effect. Three sessions of hNMES, however, did not affect median survival age (n = 37 control, n = 32 hNMES; p=0.6788; one biological replicate) (<xref ref-type="fig" rid="fig6">Figure 6C</xref>). Taken together, these data indicate that different NMES paradigms elicit different neuromuscular responses. Out of the four NMES paradigms we tested, only eNMES improves neuromuscular structure, swimming, and life span (<xref ref-type="fig" rid="fig6">Figure 6E</xref>). Thus, we further investigated the impacts of eNMES on <italic>dmd</italic> muscle structure.</p><fig id="fig6" position="float"><label>Figure 6.</label><caption><title>Impacts of neuromuscular electrical stimulation (NMES) paradigms on survival.</title><p>Survival was tracked following completion of the three NMES sessions. Survival was significantly improved in <italic>dmd</italic> mutants that completed power (<bold>A</bold>), strength (<bold>B</bold>), and endurance (<bold>C</bold>) NMES. (<bold>D</bold>) Hypertrophy NMES had no effect on survival in <italic>dmd</italic> mutants. Survival data were analyzed using a Mantel–Cox test. *p&lt;0.05, ***p&lt;0.001, ****p&lt;0.0001. (<bold>E</bold>) Summary of the impacts of NMES paradigms on neuromuscular structure and function. Note that endurance NMES is the only paradigm that improved all aspects.</p></caption><graphic mime-subtype="tiff" mimetype="image" xlink:href="elife-62760-fig6-v1.tif"/></fig></sec><sec id="s2-4"><title>eNMES improves muscle structure and sarcomere length</title><p>We found that eNMES significantly reduced muscle fiber detachments in <italic>dmd</italic> mutants (n = 22 control, n = 18 eNMES; p=0.0191; one biological replicate) (<xref ref-type="fig" rid="fig3">Figure 3F2</xref>). Many of the muscle segments in control <italic>dmd</italic> mutants had disorganized muscle fibers with a characteristic ‘waviness,’ and this appeared to be improved with eNMES. In order to quantify this aspect of muscle health, we used machine learning and trained the computer to identify, pixel-by-pixel, ‘healthy’ versus ‘sick’ with 97% accuracy. Next, we asked the computer to identify the percentage of healthy muscle in the same phalloidin images in which fiber detachments were counted on. This is visualized as muscle labeled either green (healthy) or red (sick) in <xref ref-type="fig" rid="fig7">Figure 7A</xref>. From this analysis, we observed that <italic>dmd</italic> mutants completing three sessions of eNMES trend towards having higher percentages of health muscle compared to control <italic>dmd</italic> mutants (n = 17 control, n = 15 eNMES; p=0.2052; one biological replicate) (<xref ref-type="fig" rid="fig7">Figure 7A4</xref>).</p><fig id="fig7" position="float"><label>Figure 7.</label><caption><title>Endurance neuromuscular electrical stimulation (eNMES) improves multiple components of muscle health.</title><p>(<bold>A</bold>) Machine learning was used to quantify muscle health pixel-by-pixel. Green indicates healthy pixels while red indicates unhealthy pixels. (<bold>B</bold>) Second harmonic generation (SHG) microscopy was used to quantify sarcomere length at 8 days post-fertilization (dpf). Representative SHG images of WT sibling control (<bold>B1</bold>), <italic>dmd</italic> mutant controls (<bold>B2</bold>), and <italic>dmd</italic> mutants that completed eNMES training. Anterior left, dorsal top, side mounted. Scale bars are 10 µm. (<bold>B4</bold>) Sarcomere length is significantly shorter in <italic>dmd</italic> mutant controls compared to WT sibling controls. However, eNMES significantly improves sarcomere length, bringing it closer to WT lengths. Each point represents a single sarcomere along a predetermined length of a muscle fiber. Multiple muscle fibers were measured per zebrafish. (<bold>C</bold>) Muscle nuclei were imaged at 8 dpf as a potential mechanism for improved muscle health. Anterior left, dorsal top, side mounted. (<bold>C1</bold>) Representative image of WT sibling control demonstrates healthy ellipsoidal nuclei organized along the length of the muscle fibers. (<bold>C2</bold>) Representative image of <italic>dmd</italic> mutant control demonstrates fragmented punctae as well as more spherical nuclei that clustering within the muscle segments. (<bold>C3</bold>) Representative image of <italic>dmd</italic> mutant that completed eNMES training demonstrates healthier, ellipsoidal nuclei that appear more organized within the muscle segments. Quantification of nuclear size indicates that eNMES significantly increases the volume (<bold>C4</bold>) and surface area (<bold>C5</bold>) of muscle nuclei compared to <italic>dmd</italic> mutant controls. However, nuclei are still significantly smaller compared to WT sibling controls, visually appearing to have an increased number of myonuclei compared to unstimulated <italic>dmd</italic> mutants. (<bold>C6</bold>) Filament index was used to assess circularity, specifically the departure from a circle. Filament index is significantly higher in <italic>dmd</italic> mutants that completed eNMES training, indicating that nuclei are more elongated compared to <italic>dmd</italic> mutant controls. Each point represents a single nuclei within a z-stack. (<bold>D</bold>) Transgenic <italic>dmd</italic> mutants (mylpfa:lyn-cyan [cyan], smych1:GFP [magenta]) were used to visualize changes in structural integrity of fast- and slow-twitch muscle fibers across three days. Anterior left, dorsal top, side mounted. Scale bar is 50 µm. Images were taken around the 12th myotome. (<bold>D1</bold>) Representative <italic>dmd</italic> mutant control. (<bold>D1a–D1b</bold>). At 3 dpf, there is no dystrophy in the imaged myotomes. (<bold>D1c–D1e</bold>) At 4 dpf and the beginning of 5 dpf, dystrophy is minimal with relatively few detaching muscle fibers. (<bold>D1f</bold>) However, massive muscle degeneration occurs between the first found of imaging and the third round of imaging at 5 dpf. (<bold>D1g–D1h</bold>) Fiber degeneration is still present, suggesting that the damaged muscle fibers have not been cleared and regeneration is unlikely. (<bold>D2</bold>) Representative <italic>dmd</italic> mutant that is undergoing eNMES training. (<bold>D2a–D2b</bold>) The first session of eNMES at 3 dpf does not result in immediate damage to the muscle. (<bold>D2c–D2d</bold>) Similarly, following the second session of eNMES at 4 dpf, there is no immediate muscle damage occurring in the imaged myotomes. (<bold>D2e</bold>) At 5 dpf, following the third session of eNMES, muscle fiber degeneration is evident, but by the third round of imaging (<bold>D2f</bold>), these damaged areas are being cleared and there is evidence of regeneration. (<bold>D2g–D2h</bold>) At 6 dpf, previously damaged muscle segments have new muscle fibers present. All data were analyzed using either an ordinary one-way ANOVA with Tukey’s multiple comparisons test or a Kruskal–Wallis test with Dunn’s multiple-comparison test. *p&lt;0.05, **p&lt;0.01, ***p&lt;0.001, ****p&lt;0.0001.</p></caption><graphic mime-subtype="tiff" mimetype="image" xlink:href="elife-62760-fig7-v1.tif"/></fig><p>Sarcomere length impacts muscle function (<xref ref-type="bibr" rid="bib72">Moo and Herzog, 2018</xref>). Sarcomeres produce force through the cross-bridges formed between actin and myosin, and the amount of force generated is dependent upon the amount of overlap between these thick and thin filaments (<xref ref-type="bibr" rid="bib43">Gordon et al., 1966</xref>). We used second harmonic generation (SHG) microscopy to investigate sarcomere structure at 8 dpf. SHG is a nonlinear process in which two photons of frequency ω designated as (E * E) interact with the non-centrosymmetric aligned dipole (χ<sup>(2)</sup>) region of the myosin tail. A single photon with twice the frequency (2ω) and half the wavelength is emitted in this energy-conserving label-free process. WT siblings exhibited a mean sarcomere length of 1.853 ± 0.1071 µm (<xref ref-type="fig" rid="fig7">Figure 7B1, B4</xref>). This result corresponded with sarcomere lengths previously published in 3 dpf WT zebrafish (1.86 ± 0.15 µm; <xref ref-type="bibr" rid="bib50">Huang et al., 2011</xref>). Sarcomeres were significantly shorter in <italic>dmd</italic> larvae (n = 356 sarcomeres <italic>dmd</italic> control [four fish total], n = 282 sarcomeres WT sibling [three fish total]; p&lt;0.0001; one biological replicate), with a mean length of 1.575 ± 0.1567 µm (<xref ref-type="fig" rid="fig7">Figure 7B2, B4</xref>). This result corresponded with previous studies that showed shorter sarcomeres in <italic>dmd</italic> larvae (<xref ref-type="bibr" rid="bib95">Widrick et al., 2016</xref>). We tested the hypothesis that eNMES would increase sarcomere length. Three sessions of eNMES significantly increased mean sarcomere lengths (1.707 ± 0.1710 µm) compared to <italic>dmd</italic> mutant controls (n = 356 sarcomeres <italic>dmd</italic> control [four fish total], n = 550 sarcomeres eNMES [four fish total]; p&lt;0.0001; one biological replicate) (<xref ref-type="fig" rid="fig7">Figure 7B3, B4</xref>). Although eNMES-treated <italic>dmd</italic> larvae still had shorter sarcomeres than WT siblings, these data suggest the hypothesis that eNMES may improve muscle structure and function by restoring sarcomere lengths to more optimal lengths.</p></sec><sec id="s2-5"><title>Muscle nuclei return to a more ellipsoidal shape with eNMES</title><p>Myonuclear size and shape play an important role in muscle health (<xref ref-type="bibr" rid="bib36">Folker and Baylies, 2013</xref>; <xref ref-type="bibr" rid="bib81">Roman and Gomes, 2018</xref>). We measured three components of muscle nuclei size and shape: volume, surface area, and filament index. Filament index is a measure that quantifies the departure of an object from a circle. A circle has a filament index of 1, and a higher filament index indicates a departure to a more ellipsoidal shape. Thus, a higher filament index indicates that nuclei are more elongated, which is suggested to be healthier (<xref ref-type="bibr" rid="bib14">Bruusgaard et al., 2003</xref>). Muscle nuclei in <italic>dmd</italic> mutants had significantly lower volumes (n = 1417 nuclei <italic>dmd</italic> control, n = 1355 nuclei WT sibling; p&lt;0.0001; data shown for one fish), surface areas (n = 1451 nuclei <italic>dmd</italic> control, n = 1378 nuclei WT sibling; p&lt;0.0001; data shown for one fish), and filament indices (n = 156 nuclei <italic>dmd</italic> control, n = 158 nuclei WT sibling; p=0.0187; data shown for one fish) compared to WT siblings (<xref ref-type="fig" rid="fig7">Figure 7C4–6</xref>). Interestingly, eNMES significantly increased these measures (volume: n = 1417 nuclei <italic>dmd</italic> control, n = 1861 nuclei eNMES, p&lt;0.0001; surface area: n = 1451 nuclei <italic>dmd</italic> control, n = 1990 nuclei eNMES, p&lt;0.0001; data shown for one fish), especially for filament index (n = 156 nuclei <italic>dmd</italic> control, n = 140 nuclei eNMES; p&lt;0.0001; data shown for one fish), which is restored to WT values (<xref ref-type="fig" rid="fig7">Figure 7C6</xref>). Additionally, these nuclei appear more organized along the length of individual muscle fibers (<xref ref-type="fig" rid="fig7">Figure 7C3</xref>), similar to the pattern observed in WT siblings. These data suggest that <italic>dmd</italic> mutants have smaller, spheroidal nuclei compared to WT siblings, and eNMES is capable of elongating the nuclei, and increasing their volumes and surface areas.</p></sec><sec id="s2-6"><title>Longitudinal confocal analysis suggests less degeneration and more hypertrophy/regeneration with eNMES</title><p>We used transgenic zebrafish (a generous gift from Drs. Sharon Amacher and Jared Talbot; <xref ref-type="bibr" rid="bib49">Hromowyk et al., 2020</xref>) to visualize muscle structure through time. Disease onset in these transgenic zebrafish is at 3 dpf; thus, NMES sessions were conducted at 3, 4, and 5 dpf while the recovery period extended from 6 through 9 dpf. At 3 dpf, there was not a clear difference in muscle degeneration between treated and control mutants (<xref ref-type="fig" rid="fig7">Figure 7D1a, b, D2a, b</xref>). However, by 4 dpf, control mutants exhibited initial signs of muscle degeneration (<xref ref-type="fig" rid="fig7">Figure 7D1c, D1d</xref>). eNMES mutants showed less degeneration, suggesting that eNMES delays degeneration (<xref ref-type="fig" rid="fig7">Figure 7D2c, D2d</xref>). Whereas degenerated fibers persist in control mutants for days (<xref ref-type="fig" rid="fig7">Figure 7D1f,g</xref>), degenerated segments are cleared more quickly in eNMES-treated mutants (<xref ref-type="fig" rid="fig7">Figure 7D2f,g</xref>). Finally, more robust hypertrophy or regeneration was observed in eNMES-treated mutants (<xref ref-type="fig" rid="fig7">Figure 7D2h</xref>). Taken together, these data suggest that eNMES improves muscle homeostasis.</p></sec><sec id="s2-7"><title><italic>dmd</italic> mutants may respond differently than WT controls to eNMES</title><p>RNAseq was conducted on RNA extracted at 7 dpf, 3 days following the last NMES session. The broad conclusion from this experiment is that eNMES does not appear to act primarily through transcriptional regulation, at least when assessed 3 days after the last NMES session. Principal component analysis (PCA) revealed that WT siblings that underwent three sessions of eNMES cluster separately from those in the control group (data not shown), suggesting that WT siblings that complete three sessions of eNMES have a unique expression profile compared to WT controls. Of the total 25,863 genes identified across the RNAseq analysis, 932 genes were differentially expressed between WT siblings in the eNMES versus control groups (<xref ref-type="fig" rid="fig8">Figure 8A1</xref>). Of these 932 genes, 306 genes were increased and 626 genes were decreased (<xref ref-type="fig" rid="fig8">Figure 8A3</xref>). Twenty-four Gene Ontology (GO) terms were identified, including regulation of metabolic processes, regulation of MAP kinase activity, regulation of transcription, and circadian rhythms.</p><fig id="fig8" position="float"><label>Figure 8.</label><caption><title><italic>dmd</italic> mutants do not respond to endurance neuromuscular electrical stimulation (eNMES) in the same manner as WT siblings and heme oxygenase is required for eNMES-mediated improvement.</title><p>RNAseq analysis was performed at 7 days post-fertilization (dpf) in WT siblings and <italic>dmd</italic> mutants that completed eNMES training, and their expression patterns were compared with their respective controls. (<bold>A1</bold>) Volcano plot showing significantly and biologically upregulated (blue dots) and downregulated (red dots) genes in WT siblings that completed eNMES versus those that did not. (<bold>A2</bold>) Volcano plot showing significantly and biologically upregulated (blue dots) and downregulated (red dogs) genes in <italic>dmd</italic> mutants that completed eNMES versus those that did not. (<bold>A3–A4</bold>) Summary of differentially expressed genes in WT siblings (<bold>A3</bold>) and <italic>dmd</italic> mutants (<bold>A4</bold>). WT siblings had 932 differentially expressed genes compared to 123 differentially expressed genes in <italic>dmd</italic> mutants, suggesting that <italic>dmd</italic> muscle responds differently to eNMES and the genes responsible for eliciting beneficial effects on muscle structure and function are different. (<bold>B</bold>) <italic>hmox1a</italic> expression was increased with eNMES in both WT and <italic>dmd</italic> mutants. (<bold>C1</bold>) Whereas eNMES significantly reduces the percentage of segments with dystrophy, <italic>dmd</italic> mutants injected with morpholinos against <italic>hmox1a</italic> do not show improvement with eNMES. (<bold>C2</bold>) Representative images of larvae showing that <italic>hmox1a</italic> is necessary for eNMES-mediated improvement of <italic>dmd</italic> muscle.</p></caption><graphic mime-subtype="tiff" mimetype="image" xlink:href="elife-62760-fig8-v1.tif"/></fig><p>Interestingly, the admittedly small number of differentially expressed genes suggests that eNMES may be eliciting changes in WT versus <italic>dmd</italic> mutants through different mechanisms. Based on the number of genes differentially expressed, <italic>dmd</italic> mutants do not respond to NMES in the same manner as WT siblings (<xref ref-type="fig" rid="fig8">Figure 8A2</xref>). 123 genes were differentially expressed (false discovery rate [FDR] &lt; 0.1 and abs(log2 (fold change)) &gt; 0.6) between <italic>dmd</italic> mutants that completed three eNMES sessions versus <italic>dmd</italic> mutant controls (<xref ref-type="fig" rid="fig8">Figure 8A4</xref>). This number is much lower than the 932 differentially expressed genes in WT siblings. Additionally, <italic>dmd</italic> mutants have more genes that were increased (n = 84) than decreased (n = 39), which is the opposite of WT siblings, further suggesting that <italic>dmd</italic> mutants do not respond through the same signaling pathways as their healthy counterparts. Unfortunately, GO analyses did not reveal specific cellular processes in which these genes may participate in to positively impact muscle health. Only 4 of the 1048 differentially expressed genes elicited by eNMES in both <italic>dmd</italic> mutants and WT siblings shared the same expression pattern (not shown). This lack of overlap between differentially expressed genes further indicates that <italic>dmd</italic> mutants do not respond similarly to eNMES as WT siblings.</p></sec><sec id="s2-8"><title>Heme oxygenase is necessary for eNMES-mediated improvement</title><p>Heme oxygenase (HO) is an antioxidant that has been implicated as a potential therapeutic treatment in both zebrafish and mouse models of <italic>dmd</italic> (<xref ref-type="bibr" rid="bib20">Chan et al., 2016</xref>; <xref ref-type="bibr" rid="bib55">Kawahara et al., 2014</xref>). HO 1a was upregulated by eNMES in both WT and <italic>dmd</italic> larvae (<xref ref-type="fig" rid="fig8">Figure 8B</xref>). We asked whether HO was necessary for the eNMES-mediated improvement in <italic>dmd</italic> mutants by using previously published morpholinos (<xref ref-type="bibr" rid="bib55">Kawahara et al., 2014</xref>). Morpholinos were injected at the one-cell stage, and <italic>dmd</italic> mutants injected with <italic>hmox1a</italic> morpholinos were treated with eNMES. Not surprisingly, control <italic>dmd</italic> mutants treated with eNMES had fewer fiber detachments (<xref ref-type="fig" rid="fig8">Figure 8C</xref>) and more organized muscle (<xref ref-type="fig" rid="fig8">Figure 8D</xref>). In contrast, <italic>dmd</italic> mutants injected with morpholinos against <italic>hmox1a</italic> showed no improvement after eNMES treatment (<xref ref-type="fig" rid="fig8">Figure 8C and D</xref>). Birefringence, percentage of segments with degenerating fibers, and mobility were all unchanged with eNMES in <italic>dmd</italic> mutants injected with <italic>hmox1a</italic> morpholinos (<xref ref-type="fig" rid="fig8">Figure 8B and C</xref>, data not shown). These data suggest that HO is necessary for eNMES-mediated improvement. Interestingly, however, when we analyzed RNAseq data of transcripts known to be involved in <italic>hmox1a</italic> regulation, we found that eNMES did not induce changes in these transcripts (data not shown). This result further suggests that the primary impact of eNMES is not through transcriptional regulation.</p></sec><sec id="s2-9"><title>eNMES reduces susceptibility to contraction-induced disruption of muscle structure in <italic>dmd</italic> mutants</title><p>The ECM surrounding muscle fibers is a critical component of muscle fiber health. Protein complexes spanning the sarcolemma and ECM serve as mechanical linkages and signaling hubs that promote muscle plasticity (<xref ref-type="bibr" rid="bib26">Csapo et al., 2020</xref>). However, excess ECM protein deposition can also lead to fibrosis. We asked whether ECM proteins are differentially expressed in zebrafish <italic>dmd</italic> larvae following eNMES. Despite the fact that RNAseq data represent a snapshot in time and are not the best way to capture a structure as dynamic as the ECM, we observed changes in ECM gene expression with eNMES that suggest that eNMES could impact ECM deposition. Transforming growth factor beta induced (TGFBI) is an ECM protein that binds to type I, II, and IV collagens as well as several integrins. <italic>Tgfbi</italic> is upregulated in <italic>mdx</italic> muscle compared to healthy muscle (<xref ref-type="bibr" rid="bib24">Coles et al., 2020</xref>; <xref ref-type="bibr" rid="bib77">Pescatori et al., 2007</xref>). We found that <italic>tgfbi</italic> is also significantly higher in zebrafish <italic>dmd</italic> mutants compared to WT controls. Expression of <italic>tgfbi</italic> in both <italic>dmd</italic> mutants and WT siblings was reduced with eNMES (<xref ref-type="fig" rid="fig9">Figure 9A1</xref>). Periostin (postnb) is a TGFBI-related protein that is involved in modeling the ECM and connective tissue architecture during development and regeneration, serving specifically as a mediator of fibrosis in injury and disease (<xref ref-type="bibr" rid="bib75">Ozyilmaz et al., 2019</xref>). RNAseq data indicate that <italic>postnb</italic> shares a similar expression pattern with <italic>tgfbi</italic>: increased expression in <italic>dmd</italic> mutants compared to WT siblings and a reduction in this expression following eNMES in both groups (<xref ref-type="fig" rid="fig9">Figure 9A2</xref>). These data suggest the hypothesis that fibrosis could be reduced in eNMES-treated zebrafish. One impact of a reduction in excess fibrosis could be increased muscle-cell adhesion to the ECM.</p><fig id="fig9" position="float"><label>Figure 9.</label><caption><title>Muscle resilience to hard stimulation is increased with endurance neuromuscular electrical stimulation (eNMES), and Itga7 is required for eNMES-mediated improvement.</title><p>We identified three extracellular matrix (ECM) genes from RNAseq analysis, <italic>tgfbi</italic> (<bold>A1</bold>), <italic>postnb</italic> (<bold>A2</bold>), <italic>itgb1b.2</italic> (not shown) that are significantly upregulated in <italic>dmd</italic> mutants compared to WT siblings and trend towards being downregulated with eNMES in <italic>dmd</italic> mutants. (<bold>B</bold>) Experimental overview. At 3 days post-fertilization (dpf) (disease onset), birefringence images were taken followed by the first session of eNMES. At 4 and 5 dpf, zebrafish undergo the second and third NMES sessions, respectively. At 7 dpf, muscle resilience was tested using a hard electrical stimulation paradigm intended to cause muscle damage. (<bold>C</bold>) Birefringence images were taken at 3 dpf (<bold>C1a</bold>). (<bold>C1b–d</bold>) Birefringence images were taken at 7 dpf before the first hard stimulation (<bold>C1b</bold>), after the first hard stimulation (<bold>C1c</bold>), and after the second hard stimulation (<bold>C1d</bold>). No visible changes in birefringence are observed in WT siblings after the two stimulation sessions. (<bold>C2</bold>) For <italic>dmd</italic> mutant controls, the first round of stimulation did not result in visible changes to birefringence (<bold>C2c</bold>), but, after the second round, areas of muscle degeneration are visible (<bold>C2d</bold>, yellow asterisks). Conversely, in <italic>dmd</italic> mutants that completed three sessions of eNMES, the first (<bold>C3c</bold>) and second (<bold>C3d</bold>) rounds of stimulation did not result in visible changes to birefringence (green arrowheads denote intact areas of birefringence that remain intact). (<bold>C4, C5</bold>) Change in birefringence from before to after the first round (<bold>C4</bold>) and second (<bold>C5</bold>) of stimulation suggests that eNMES training may improve muscle resilience. (<bold>D</bold>) Phalloidin was used to visualize individual muscle fibers. (<bold>D1a</bold>) Representative image of a WT sibling control demonstrates healthy, organized muscle fibers, and myotomes. (<bold>D2a</bold>) Representative image of a <italic>dmd</italic> mutant control highlights disorganized and wavy muscle fibers and fiber detachments. (<bold>D3a</bold>) Representative image of a <italic>dmd</italic> mutant that completed eNMES demonstrates some wavy muscle fibers and detached fibers intermixed with relatively healthy myotomes. (<bold>D4</bold>) The percent of muscle segments with detached fibers following the hard stimulation is reduced in <italic>dmd</italic> mutants that complete eNMES training compared to <italic>dmd</italic> mutant controls. For this analysis, a muscle segment was defined as half of a myotome. (<bold>D1b, D2b, D3b</bold>) Machine learning was used to quantify muscle health pixel-by-pixel. Green indicates healthy pixels while red indicates unhealthy pixels. (<bold>D5</bold>) The percent of healthy muscle following the hard stimulation is significantly higher in <italic>dmd</italic> mutants that completed eNMES compared to <italic>dmd</italic> mutant controls. (<bold>E</bold>) <italic>itga7</italic> mutants were subjected to the same eNMES protocol that results in improvements in <italic>dmd</italic> mutants. Note that eNMES does not improve birefringence (panels <bold>E1, E3</bold>, quantified in <bold>E5</bold>) or muscle structure in <italic>itga7</italic> mutants (<bold>E2, E4</bold>). All data were analyzed using two-sided <italic>t</italic>-tests. *p&lt;0.05.</p></caption><graphic mime-subtype="tiff" mimetype="image" xlink:href="elife-62760-fig9-v1.tif"/></fig><p>Cell-matrix adhesion is negatively affected in various models of muscular dystrophy, and restoration of adhesion improves muscle structure and function (<xref ref-type="bibr" rid="bib17">Burkin et al., 2005</xref>; <xref ref-type="bibr" rid="bib16">Burkin et al., 2001</xref>; <xref ref-type="bibr" rid="bib42">Goody et al., 2012</xref>). Therefore, the downregulation of key cell adhesion proteins following eNMES was puzzling and led us to ask whether muscle cell-matrix adhesion was altered by eNMES. We did this by subjecting zebrafish to a hard stimulation paradigm designed to make muscle fibers detach from their ECM for two back-to-back sessions (<xref ref-type="fig" rid="fig9">Figure 9B</xref>). This experiment was conducted 2 days after the final eNMES training session. This 1 min hard stimulation paradigm was defined by a frequency of 4 pulses per second, a delay of 60 ms, a duration of 2 ms, and a voltage of 30 V, which is similar to that known to initiate muscle fiber detachment from their ECM (<xref ref-type="bibr" rid="bib90">Subramanian and Schilling, 2014</xref>). Birefringence images were taken before and after each session. To ensure consistency in imaging, zebrafish were mounted laterally with their left side facing up, and the same imaging parameters were used for each zebrafish across all imaging sessions. We then analyzed the change in mean gray values before stimulation compared to after the first or second session. Nearly half of the control mutants (10/22) had decreased mean gray values after the first session (<xref ref-type="fig" rid="fig9">Figure 9C4</xref>), and slightly over half (13/22) had decreased mean gray values after the second session (<xref ref-type="fig" rid="fig9">Figure 9C5</xref>). In contrast, just under 25% of eNMES-treated mutants (5/22) had a decreased mean gray value after the first session (<xref ref-type="fig" rid="fig9">Figure 9C4</xref>) and slightly under a third had a decreased mean gray value after the second session (7/22; <xref ref-type="fig" rid="fig9">Figure 9C5</xref>). While there are no differences in absolute mean gray values between control and eNMES mutants before and after the first round of stimulation (n = 22 control, n = 22 eNMES; p=0.3453; one biological replicate) (<xref ref-type="fig" rid="fig9">Figure 9C4</xref>), the change in mean gray values for eNMES-treated <italic>dmd</italic> mutants trends higher (healthier muscle) than controls following the second round of stimulation (n = 22 control, n = 22 eNMES; p=0.0803; one biological replicate) (<xref ref-type="fig" rid="fig9">Figure 9C5</xref>). There are slightly fewer muscle segments with detachments in <italic>dmd</italic> mutants that completed eNMES compared to control <italic>dmd</italic> mutants (n = 22 control, n = 18 eNMES; p=0.2505; one biological replicate) (<xref ref-type="fig" rid="fig9">Figure 9D4</xref>). The most striking difference in appearance between the control and eNMES <italic>dmd</italic> mutants after the hard stimulation was the improved organization of muscle fibers in eNMES-treated <italic>dmd</italic> mutants. Whereas control <italic>dmd</italic> mutants had lots of disorganized fibers (<xref ref-type="fig" rid="fig9">Figure 9D2a</xref>, red arrow), eNMES <italic>dmd</italic> mutants had more organized fibers (<xref ref-type="fig" rid="fig9">Figure 9D3a</xref>, green arrow). We used machine learning to quantify overall muscle health. This approach showed that <italic>dmd</italic> mutants that completed eNMES had a significantly higher percentage of healthy muscle compared to control <italic>dmd</italic> mutants (n = 21 control, n = 22 eNMES; p=0.0496; one biological replicate) (<xref ref-type="fig" rid="fig9">Figure 9D5</xref>). Taken together, these data indicate that eNMES-treated <italic>dmd</italic> mutants can withstand contraction-induced disruption of muscle structure better than <italic>dmd</italic> mutant controls.</p></sec><sec id="s2-10"><title>Integrin alpha7 is required for eNMES-mediated improvement in muscle structure</title><p>The above data suggest the hypothesis that muscle fiber adhesion to the matrix is increased in <italic>dmd</italic> mutants treated with eNMES. Itga7 is a transmembrane receptor that mediates the response of skeletal muscle to eccentric exercise (<xref ref-type="bibr" rid="bib13">Boppart et al., 2008</xref>; <xref ref-type="bibr" rid="bib65">Lueders et al., 2011</xref>; <xref ref-type="bibr" rid="bib68">Mahmassani et al., 2017</xref>). It is not known whether Itga7 mediates the response to NMES. We hypothesized that Itga7 is required for eNMES-mediated improvement. We tested this hypothesis by generating Itga7 mutants (<xref ref-type="bibr" rid="bib23">Coffey et al., 2021</xref>) and testing whether eNMES improves muscle structure in these mutants. We found that eNMES did not impact muscle structure in <italic>itga7-/-</italic> larvae (<xref ref-type="fig" rid="fig9">Figure 9E</xref>). Thus, Itga7 is required for eNMES-mediated improvement of muscle structure at least in the context of <italic>itga7</italic> mutants.</p></sec></sec><sec id="s3" sec-type="discussion"><title>Discussion</title><p>We used an experimental design that leverages the power of the zebrafish model’s ability to perform in vivo analyses of numerous components of organismal health across time in individual zebrafish. By implementing this longitudinal design, we demonstrate that (1) different NMES paradigms elicit different effects on neuromuscular structure, swimming, and life span; (2) eNMES positively benefits neuromuscular health, function, and survival in <italic>dmd</italic> mutants; (3) changes are accompanied by improvements in NMJ length, nuclear shape and size, and sarcomere lengths; (4) <italic>dmd</italic> mutants respond to NMES differently than WT siblings; (5) HO signaling is required for eNMES-mediated improvement; and (6) Itga7 is required for eNMES-mediated improvement, suggesting that cell adhesion is increased in eNMES-treated embryos (<xref ref-type="fig" rid="fig10">Figure 10</xref>). These findings indicate that the zebrafish model is a valuable tool for studying skeletal muscle plasticity and that healthy and dystrophin-deficient muscle use different mechanisms to maintain homeostasis.</p><fig id="fig10" position="float"><label>Figure 10.</label><caption><title>Summary.</title><p>Endurance neuromuscular electrical stimulation (eNMES) positively benefits neuromuscular health, function, and survival in <italic>dmd</italic> mutants. Muscle fibers in <italic>dmd</italic> mutants treated with eNMES are more organized and have fewer detachments. Neuromuscular junctions (NMJs) are longer in eNMES-treated <italic>dmd</italic> mutants. Sarcomeres are longer and nuclei are more ellipsoid and aligned. eNMES-treated mutants swim faster and more distance than control siblings. Both heme oxygenase and Itga7 are required for eNMES-mediated improvements.</p></caption><graphic mime-subtype="tiff" mimetype="image" xlink:href="elife-62760-fig10-v1.tif"/></fig><sec id="s3-1"><title>The impacts of activity on the progression of DMD</title><p>Reviews regarding the potential impact of exercise on DMD muscle tend to draw the same conclusion: that more research with studies that incorporate longitudinal designs, different modes of exercise, impacts of exercise on other treatment modalities, and standardized outcome measures is necessary (<xref ref-type="bibr" rid="bib4">Anziska and Sternberg, 2013</xref>; <xref ref-type="bibr" rid="bib53">Hyzewicz et al., 2015</xref>; <xref ref-type="bibr" rid="bib71">Markert et al., 2012</xref>; <xref ref-type="bibr" rid="bib70">Markert et al., 2011</xref>; <xref ref-type="bibr" rid="bib92">Voet et al., 2013</xref>). Treadmill exercise is frequently used in mouse models to exacerbate the <italic>mdx</italic> phenotype (<xref ref-type="bibr" rid="bib53">Hyzewicz et al., 2015</xref>). However, there are multiple studies that show beneficial effects of either treadmill exercise or voluntary wheel running on the progression of muscle degeneration in <italic>mdx</italic> mice (<xref ref-type="bibr" rid="bib37">Gaiad et al., 2017</xref>; <xref ref-type="bibr" rid="bib97">Zelikovich et al., 2019</xref>). It is important to note that the vast majority of these studies investigated aerobic activity, with only one ‘resistance training’ regimen that involved adding weights to a running wheel. Thus, the impact of resistance training is not well understood. With regards to aerobic exercise, the true answer is likely that there is both some variation among individuals and that there is a delicate balance between positive and negative impacts of exercise on muscle homeostasis. Our data showing that different NMES regimes have different impacts on muscle structure and function support the hypothesis that there is not a clear ‘one-size-fits-all’ approach to exercise and <italic>dmd</italic>.</p></sec><sec id="s3-2"><title>Zebrafish as a model for elucidating neuromuscular plasticity</title><p>The negative consequences of inactivity on muscle resilience led us to ask whether the activity could improve muscle resilience, and, therefore, disease progression. We selected NMES as a mechanism to elicit consistent, repeatable contraction patterns across individual zebrafish. We generated four NMES paradigms that varied in frequency and voltage to test how different contraction patterns impact muscle structure, function, and survival. Collectively, our experiments suggest that <italic>dmd</italic> muscle exhibits a delicate, intricate equilibrium with several factors influencing muscle structure, swimming activity, and survival. Birefringence does not predict swimming performance and swimming performance does not predict survival. For example, two paradigms, eNMES and pNMES, improved muscle structure while two paradigms, hNMES and sNMES, negatively affected muscle structure. Surprisingly, though, only eNMES increased swimming activity. In contrast, survival was extended by eNMES as well as pNMES and sNMES. Therefore, this is a new model to understand disease progression and elucidate mechanistic pathways that target improvements in structure, function, and survival.</p></sec><sec id="s3-3"><title>Potential benefits of NMES</title><p>Electrical stimulation has been shown to be generally safe and potentially effective for some conditions. For example, there are potential therapeutic benefits of NMES for the treatment of spinal cord injuries. Although not all trials observe an increase in voluntary muscle strength with NMES, none found deleterious effects of NMES (<xref ref-type="bibr" rid="bib28">de Freitas et al., 2018</xref>). NMES can also improve dysphagia after stroke: 10 out of 11 trials showed that NMES improved swallowing with only one showing no effect (<xref ref-type="bibr" rid="bib1">Alamer et al., 2020</xref>). NMES combats disuse atrophy in multiple contexts. Chronic NMES applied to mice who were anesthetized for 2.5 weeks not only showed increased muscle mass in the stimulated limb, but also had improved insulin sensitivity (<xref ref-type="bibr" rid="bib62">Lotri-Koffi et al., 2019</xref>). NMES for at least 7 days is sufficient to improve muscle mass of lower limbs in non-ambulatory patients with traumatic brain injury (<xref ref-type="bibr" rid="bib88">Silva et al., 2019</xref>). NMES is even being studied as a means to combat muscle atrophy during spaceflight (<xref ref-type="bibr" rid="bib67">Maffiuletti et al., 2019</xref>). The above data show that NMES has potential benefits for sudden muscle disuse caused by external events, but the molecular and cellular mechanisms are not well understood.</p><p>NMES also shows promise for neurodegenerative disorders and aging muscle. Muscle mass and strength are improved in aged rats with NMES, and NMES improves muscle mass and balance in older adults as well as older adults with dementia (<xref ref-type="bibr" rid="bib31">Dow et al., 2005</xref>; <xref ref-type="bibr" rid="bib56">Kern et al., 2014</xref>; <xref ref-type="bibr" rid="bib74">Nishikawa et al., 2021</xref>). NMES improves mobility in patients with progressive multiple sclerosis (<xref ref-type="bibr" rid="bib94">Wahls et al., 2010</xref>). NMES may also improve mobility and strength in Amyotrophic Lateral Sclerosis (ALS) (<xref ref-type="bibr" rid="bib47">Handa et al., 1995</xref>), although the intensity may be important (<xref ref-type="bibr" rid="bib44">Group, 2017</xref>). Far less is known about NMES in the context of muscular dystrophies. The concept of super-imposing electrical stimulation to improve dystrophic muscle was proposed by the neurologist who first described DMD over a hundred years ago (<xref ref-type="bibr" rid="bib33">Duchenne, 1870</xref>). Despite the longevity of this hypothesis, it has not been sufficiently tested as a therapy for DMD. There are promising data: NMES improves muscle fiber morphology in dystrophic mice (<xref ref-type="bibr" rid="bib27">Dangain and Vrbova, 1989</xref>; <xref ref-type="bibr" rid="bib66">Luthert et al., 1980</xref>; <xref ref-type="bibr" rid="bib93">Vrbová and Ward, 1981</xref>) and chickens (<xref ref-type="bibr" rid="bib7">Barnard et al., 1986</xref>). In chickens, the benefit was most pronounced if administered prior to rampant muscle degeneration (<xref ref-type="bibr" rid="bib7">Barnard et al., 1986</xref>). Small trials in young children also suggest that early low-frequency NMES can improve voluntary muscle contraction compared with the contralateral leg (<xref ref-type="bibr" rid="bib86">Scott et al., 1990</xref>; <xref ref-type="bibr" rid="bib85">Scott et al., 1986</xref>). NMES can also improve muscle function in myotonic dystrophy (<xref ref-type="bibr" rid="bib22">Chisari et al., 2013</xref>) and limb girdle muscular dystrophy (<xref ref-type="bibr" rid="bib57">Kilinç et al., 2015</xref>). Despite these promising studies, NMES is not commonly used as an adjuvant therapy in myopathies and dystrophies. This is potentially due to the impractical approach of chronic NMES for most if not all skeletal muscles. Thus, it is important to elucidate the underlying molecular and cellular mechanisms of beneficial impacts of NMES. It is known that electrical stimulation increases both the number and size of AChR clusters in primary myoblasts. The fact that the expression of Rhapsyn is also increased indicates that the increased AChR clusters are leading to increased mature NMJs. However, clearly more mechanistic studies regarding the effects of NMES on muscular dystrophies are warranted.</p></sec><sec id="s3-4"><title>Potential mechanisms for improved neuromuscular function</title><p>We found that eNMES increased sarcomere lengths, which could improve force generation by leading to a more optimal interaction between actin and myosin filaments. Nuclear volume, surface area, and filament index were increased with eNMES, suggesting that muscle nuclei are returning to their elongated shape. As nuclear size affects DNA organization, transcriptional and translational processes, and nuclear import and export activities (<xref ref-type="bibr" rid="bib60">Levy and Heald, 2012</xref>), minor changes in size correlate with reduced muscle function and fiber performance (<xref ref-type="bibr" rid="bib96">Windner et al., 2019</xref>). Therefore, these improvements in muscle nuclei may also mediate improvements in muscle structure and function following eNMES. Time-lapse imaging data support the hypothesis that eNMES is creating an environment that supports regeneration. Following eNMES in <italic>dmd</italic> mutants, there is less degeneration and in those areas with degenerating fibers, newly regenerated fibers appear sooner. RNAseq data largely suggested that the impacts of eNMES are not primarily transcriptional. The RNAseq data did however identify two potential mechanisms that may allow for the above improvements to occur. HO is an antioxidant that has been implicated as a potential therapeutic treatment in both zebrafish and mouse models of <italic>dmd</italic> (<xref ref-type="bibr" rid="bib20">Chan et al., 2016</xref>; <xref ref-type="bibr" rid="bib55">Kawahara et al., 2014</xref>). Hmox1a expression was upregulated in both WT and <italic>dmd</italic> mutants with eNMES. We found that <italic>hmox1a</italic> is necessary for the eNMES-mediated improvement in muscle structure and function in <italic>dmd</italic> mutants.</p><p>The second mechanism includes the potential remodeling of the ECM. The ECM is constantly responding to signals from both within and outside the cell, and incorporating these signals to create a scaffold that supports either regeneration or fibrosis such that the cell is protected from further damage. Our RNAseq data suggest that eNMES may result in ECM remodeling to support regeneration and/or limit fibrosis. One impact of changes in ECM could be increased adhesion of muscle fibers to their ECM. Fiber cross-sectional area is increased in transgenic mice overexpressing Itga7 after eccentric exercise (<xref ref-type="bibr" rid="bib65">Lueders et al., 2011</xref>; <xref ref-type="bibr" rid="bib98">Zou et al., 2011</xref>). In contrast, muscle damage is exacerbated in Itga7 mutant mice, especially near sites of high mechanical force near the MTJs (<xref ref-type="bibr" rid="bib13">Boppart et al., 2008</xref>). While the complete mechanisms are not known, Itga7 promotes enhanced proteostasis (<xref ref-type="bibr" rid="bib68">Mahmassani et al., 2017</xref>) and increased Sca-1<sup>+</sup>CD45<sup>-</sup> mesenchymal stem cells. We asked whether Itga7 was required for eNMES-mediated improvement. Itga7 mutant larvae did not improve with eNMES, indicating that Itga7 is required for eNMES-mediated improvement. We did not generate <italic>dmd;itga7</italic> double mutants to test whether eNMES is not effective in this context, which would be interesting to do. Taken together, these data suggest the hypothesis that one mechanism of eNMES improvement is increased adhesion of muscle fibers to their ECM.</p></sec><sec id="s3-5"><title>Summary</title><p>Identifying the basic mechanisms by which activity impacts muscle health in the context of muscle disease is a crucial first step towards identifying potential therapies. Here, we identify an NMES paradigm that improves neuromuscular structure, function, and life span. We show that NMES differently affects gene expression in WT versus <italic>dmd</italic> mutants. This result indicates that it is critical to study the impacts of the activity on diseased muscle in addition to WT muscle. Finally, we show that eNMES acts via Itga7 and HO signaling. Taken together, our data not only establish a model system for neuromuscular plasticity in healthy versus diseased muscle but also clearly elucidate the beneficial effects of NMES.</p></sec></sec><sec id="s4" sec-type="materials|methods"><title>Materials and methods</title><sec id="s4-1"><title>Zebrafish husbandry and transgenic lines</title><p>Zebrafish embryos were retrieved from natural spawns of adult zebrafish maintained on a 14 hr light/10 hr dark cycle. We used sapje<sup>ta222a</sup> zebrafish (<xref ref-type="bibr" rid="bib8">Bassett et al., 2003</xref>). For live imaging studies, we used transgenic sapje<sup>ta222a</sup> 3MuscleGlow zebrafish expressing mylpfa:lyn-cyan, smych1:GFP, and myog:H2B:RFP (gift from Drs. Sharon Amacher and Jared Talbot; <xref ref-type="bibr" rid="bib49">Hromowyk et al., 2020</xref>). Embryos were grown in embryo-rearing media (ERM) with methylene blue at 28.5°C. Embryos were manually dechorionated at 1 dpf. Zebrafish were fed once daily beginning at 5 dpf (Larval AP100 Dry Larval Diet [&lt;50 µm], Zeigler, PA). For survival studies, zebrafish were housed in 20 mm Petri dishes with 10 mL of system water per dish beginning at 8 dpf. Survival checks were performed in the morning and at night. All protocols conform to the University of Maine Institutional Animal Care and Use Committee’s Guidelines.</p></sec><sec id="s4-2"><title>Experimental overview</title><p>Experiments were conducted identically so that variables such as treatment duration, disease stage at the time of treatment, and disease stage at the time of evaluation did not change. Zebrafish were followed individually throughout each experiment so that disease progression could be monitored throughout time in longitudinal studies. Experiments began at disease onset. Disease onset for our <italic>sapje</italic> line is at 2 dpf. For the live imaging studies, disease onset in the transgenic <italic>sapje</italic> line is at 3 dpf even though the alleles harboring the mutation are identical. However, this transgenic line was imported from The Ohio State University, while our line has been maintained solely at the University of Maine. Experiments were carried out exactly the same for our <italic>sapje</italic> line and the transgenic line. At disease onset, zebrafish were identified via birefringence as a <italic>dmd</italic> mutant or healthy WT sibling. Healthy WT siblings had myotomes with organized, parallel muscle fibers that appear bright white while <italic>dmd</italic> mutants had myotomes with disorganized and detached muscle fibers that appear gray to black (<xref ref-type="bibr" rid="bib8">Bassett et al., 2003</xref>). Larvae were housed in 12-well plates (one fish per well) with 3 mL of ERM per well. Zebrafish were then randomly assigned to control or NMES cohorts for the next 3 days (the treatment period). At the end of this treatment period, zebrafish were allowed to recover for an additional 4 days (recovery period). During the treatment and recovery periods, disease progression was monitored by daily birefringence and swim activity analyses, with a special emphasis on what is occurring at 5 and 8 dpf as these mark the beginning and end of the recovery period.</p></sec><sec id="s4-3"><title>NMES paradigm</title><p>The first NMES session began at disease onset. The treatment period included one session of NMES at 2, 3, and 4 dpf for a total of three sessions. Following the completion of the third NMES session, zebrafish entered the recovery period from 5 to 8 dpf.</p><p>Zebrafish were subjected to NMES in groups of four using our 3D printed ‘gym’ (<xref ref-type="fig" rid="fig1">Figure 1B</xref>). The rectangular gym is divided into six rectangular wells that measure 4.7625 mm (length), 1.5875 mm (width), and 1.5875 mm (depth). Two tunnels run parallel to the smaller sides of the rectangular wells and the positive and negative electrodes slide through these tunnels such that they are exposed only in the wells. This allows the delivery of electrical pulses to each zebrafish simultaneously. Prior to the NMES session, zebrafish were transferred to tricaine solution (612 µM in 1× ERM) for 4 min. At the end of the 4 min, zebrafish were placed into a well with its head facing the positive electrode and its tail facing the negative electrode. The positive and negative electrodes were attached to a Grass SD9 Stimulator, which was used to generate the electrical pulses. The frequency, delay, and voltage were adjusted for the different paradigms (<xref ref-type="fig" rid="fig1">Figure 1C and D</xref>). Each NMES session lasted 1 min. Following each NMES session, zebrafish were removed from the gym and placed back into their respective wells.</p></sec><sec id="s4-4"><title>Birefringence analysis</title><p>Birefringence was used to quantitatively assess the daily progression of dystrophy (<xref ref-type="bibr" rid="bib10">Berger et al., 2012</xref>). Zebrafish were placed in tricaine (612 µM) immediately prior to imaging and then transferred to a 35 mm glass-bottom dish. Birefringence images were taken on a Leica MZ10 F Stereomicroscope with a Zeiss AxioCamMRm or Leica DMC5400 camera attached. An analyzer in a rotatable mount (Leica) was attached to the objective, and the glass-bottom Petri dish was placed on the polarized glass stage. Images were taken at the same time every day within an experiment. Imaging parameters were consistent for all zebrafish and across all days. Mean gray values were calculated using Fiji software as described previously (<xref ref-type="bibr" rid="bib10">Berger et al., 2012</xref>). Briefly, the body of the zebrafish was outlined from the 6th to the 25th myotome using the ‘Polygon selections’ tool, and then the mean gray value was measured. Three separate outlines were drawn to obtain three separate measures, and the average was used for calculations. All images were blinded prior to measurements using a Perl script. Mean gray values are presented as a percentage of the average mean gray value of healthy WT siblings in the control group.</p></sec><sec id="s4-5"><title>DanioVision analysis</title><p>The DanioVision system and EthoVision XT 13.0 software (Noldus, VA) were used to conduct high-throughput locomotion tracking studies to better characterize the impact of NMES on zebrafish swim function. A clear 12-well plate was placed into the DanioVision observation chamber. The temperature control unit was set to 28.5°C, ensuring that the temperature of the ERM in the well plate was maintained. Zebrafish had a 5 min acclimation period to the observation chamber prior to the beginning of the recording period. Using the EthoVision software, we created a white-light routine that included 5 min in the dark followed by two light-on/off cycles, where the white light was turned on at 100% intensity for 5 min and then turned off for 5 min. The total recording time was 25 min. Recordings were made at the same time each day. For each fish, the average total distance and mean velocity across 1 min intervals were calculated, such that each fish had a total of 25 measurements for total distance and mean velocity. We then focused on swim activity during the three 5 min dark periods, which represent when zebrafish are most active. This analysis provided 15 measurements for each zebrafish.</p></sec><sec id="s4-6"><title>Membrane permeability indicated by Evan’s blue dye</title><p>Evan’s blue dye is a membrane-impermeable dye used to assess membrane damage. In <italic>dmd</italic> mutants, EBD is used to assess muscle fiber integrity, and we used EBD to assess fiber integrity pre- and post-NMES using the methods described by <xref ref-type="bibr" rid="bib89">Smith et al., 2015</xref>. EBD (Sigma-Aldrich, MO) was dissolved to 1% w/v in 0.9% saline solution. This EBD stock solution was further diluted to 0.1% then loaded into an injection needle pulled from glass capillary tubes on a Sutter Flaming/Brown Micropipette Puller (CA). Zebrafish were placed in tricaine (612 µM) for 4 min. At the end of the 4 min, zebrafish were aligned on a 1% agarose-lined Petri dish in a minimal volume of ERM. The needle was gently inserted into the pericardial space, and EBD was injected using a MPPI-3 pressure injector (ASI, Eugene, OR). Zebrafish were allowed to recover for 4 hr, providing ample time for the dye to circulate the body and enter damaged muscle fibers. Zebrafish were prepared for live imaging as described above for birefringence. An ET DSR fluorescent filter (Leica) was used to visualize EBD. After imaging the initial dye amount in each zebrafish, zebrafish underwent one session of NMES as described above. Immediately after the NMES session, zebrafish were again prepared for live imaging. This allowed us to observe whether NMES caused additional dye entry into the muscle. Imaging parameters remained the same for all zebrafish and imaging sessions. Zebrafish were mounted laterally with the head on the left and dorsal up. To quantify EBD entry, we calculated mean gray values using the same methods described for birefringence except the outline was drawn from the first visible somite to the last visible somite. All images were blinded prior to analysis using a Perl script. Data is presented as the average mean gray value for three separate measurements.</p></sec><sec id="s4-7"><title>Immunostaining</title><p>Zebrafish were fixed in 4% paraformaldehyde for 4  hr at room temperature. After fixation, embryos were rinsed in PBS-0.1% Tween 20 (PBS-tw; Bio-Rad, Hercules, CA). For visualizing muscle structure, phalloidin was used. Zebrafish were first permeabilized in PBS-2% Triton-X-100 (Fisher Scientific, Waltham, MA) for 1.5  hr and then placed in 1:20 phalloidin (Invitrogen, Eugene OR) in PBS-tw for 4 hr on the rocker at room temperature. Zebrafish were rinsed out of phalloidin using PBS-tw and stored in PBS-tw until imaged. For visualizing NMJs, zebrafish were stained with alpha-bungarotoxin and SV2. Zebrafish were first permeabilized in 1  mg/ml collagenase in 1× PBS for 1.5 hr, and then stained with 1:500 alpha-bungarotoxin-647 (Invitrogen) and 1:20 phalloidin in antibody block (5% BSA [Fisher Scientific], 1% DMSO [Sigma-Aldrich], 1% Triton-X-100, 0.2% saponin from quillaja bark [Sigma-Aldrich] in 1× PBS) for 2 hr at room temperature. Zebrafish were rinsed using PBS-tw and placed in antibody block overnight at 4°C. Zebrafish were then stained with 1:50 SV2 (DSHB, Iowa City, IA) in antibody block for 3  days at 4°C. Upon removal from SV2, zebrafish were rinsed using PBS-tw and then placed in antibody block for 8  hr on the rocker at room temperature. This was followed by an overnight incubation in 1:200 GAM (Invitrogen) in antibody block. Zebrafish were then rinsed out of secondary antibody using PBS-tw and stored in PBS-tw until imaged. Phalloidin-488 or -546 and GAM-488 or -546 were used interchangeably with no differences in staining observed.</p></sec><sec id="s4-8"><title>Imaging</title><p>Confocal imaging was used to visualize phalloidin and NMJ staining. Fixed and stained zebrafish were deyolked and then mounted in a 24-well glass-bottom plate using 0.5% low-melt agarose (Boston BioProducts, Ashland, MA) in 1× PBS. For live confocal time-lapse imaging, zebrafish were anesthetized in tricaine solution (612 µM in 1× ERM) for 4 min and then mounted in a 24-well glass-bottom plate or 30 mm glass-bottom Petri dish using 0.5% low-melt agarose in 1× ERM (with 612 µM tricaine). Two or three zebrafish were placed in each well. Zebrafish were mounted anterior left and dorsal up to ensure the same side of the fish was imaged each day. Finally, a small amount of tricaine solution (612 µM in 1× ERM) was added to prevent the agarose from evaporating and ensure the zebrafish remained anesthetized throughout the imaging session. Upon completion of imaging, zebrafish were gently removed from the agarose using a fine fishing line and returned to their respective wells. All fluorescent images were captured using the Leica SP8 confocal microscope.</p><p>SHG imaging was used as a label-free mechanism to visualize sarcomeres. Fixed zebrafish were deyolked and then mounted in a 30 mm glass-bottom Petri dish using 1.0% low-melt agarose in 1× PBS. Once the agarose solidified, the Petri dish was filled with 1× PBS. Images were acquired using a custom-built two-photon microscope. This system uses a modified Olympus FV300 system with an upright BX50WI microscope stand and a mode-locked Ti:Sapphire (Coherent Ultra II) laser. Laser power was modulated via an electro-optic modulator. The SHG signals were collected in a non-descanned geometry using a single PMT. Emission wavelengths were separated from excitation wavelengths using a 665 nm dichroic beam splitter followed by a 448/20 nm bandpass filter for SHG signals. Images were acquired using circular polarization with excitation power ranging from 1 to 50 mW and a 40 × 0.8 NA water immersion objective with 3× optical zoom and scanning speeds of 2.71 s per frame. All images were 512 × 512 pixels with a field of view of 85 µm.</p></sec><sec id="s4-9"><title>Image analysis</title><p>All images were blinded using a Perl script prior to analysis. The percent of myotomes with muscle fiber detachments was calculated manually by counting the number of muscle segments with visibly detached fiber(s). Muscle segments are defined as half myotomes. Additionally, we used machine learning to identify healthy versus unhealthy muscle fibers. For these analyses, we used MATLAB to implement a deep learning approach to segment images of phalloidin-stained fish into healthy muscle, sick muscle, and background. We used the DeepLab v3+ system with an underlying Resnet18 network (<xref ref-type="bibr" rid="bib21">Chen et al., 2017</xref>). We defined the ground truth dataset manually using LabelBox (<ext-link ext-link-type="uri" xlink:href="https://labelbox.com/">https://labelbox.com/</ext-link>). Training images and ground truth images were broken down into 256 × 256 pixel images for training. The training dataset was divided into 60% training, 20% validation, and 20% test data. Median frequency weighting was used to balance the classes. Each fish was oriented such that the head of the fish would be at the left of the image. Data was augmented to translate the images by 10 pixels vertically and horizontally. Rotation was found to make the network less accurate as the orientation angle of the muscle fibers relative to the body orientation is important to assess their health. The stochastic gradient descent with momentum optimizer was selected with 0.9 momentum. The maximum number of epochs was 100, and the mini-batch size was 8. In every epoch, the training dataset was shuffled. The number of iterations between evaluations of validation metrics was 315. The patience of validation stopping of network training is set up to 4. The initial learning rate used for training was 0.001. The learning rate was dropped 0.3-fold piecewise during training every 10 epochs. The factor for L2 regularization (weight decay) was 0.005. The training set reached an accuracy of 97%. Images were then segmented by the MATLAB <italic>semanticseg</italic> command, which produced eight-bit unsigned integer segmentations. The fraction of each fish that was determined to be healthy was reported as a fraction of the total muscle. Pixels determined to be background (i.e., not muscle) were excluded from this calculation.</p><p>For NMJ analyses, we used a method previously published by our laboratory (<xref ref-type="bibr" rid="bib5">Bailey et al., 2019</xref>). To prepare images for analysis, a custom Fiji macro was written to keep image processing consistent throughout all experiments. First, the raw .lif file was opened in Fiji and the image was split into its respective channels (phalloidin, AChR, and SV2). The phalloidin channel was immediately saved as a .tif file and closed. For the AChR and SV2 channels, duplicate z-stacks were created and a 10-pixel radius Gaussian blur was applied. These blurred images were then subtracted from their original images, respectively. The resulting images were then merged to a single image and a maximum intensity projection was generated. This maximum intensity projection was saved as a .tif file and closed. For each experiment, the maximum intensity projections were combined into a single .tif file using a custom MATLAB script. This combined .tif file was then opened in Fiji and three separate masks, marking the fish body, horizontal myoseptum, and myoseptal innervation, were drawn on the projected images using the Pencil tool. These masks were used to define individual muscle segments, where each muscle segment represents half of a single myotome. Using a custom MATLAB script, skeleton number and skeleton length were calculated for each muscle segment across all zebrafish analyzed.</p><p>Muscle nuclei were analyzed using Fiji’s 3D Objects Counter as well as the Measure tool. To prepare images for analysis, we first reduced background noise by duplicating the z-stack, performing a 10-pixel Gaussian blur on the duplicated image, and subtracting the blurred image from the original image. We then performed a 1-pixel Gaussian blur on the resultant image and set a threshold using ‘max entropy’ setting. With this image, we used the Analyze Particles tool to generate masks to use with the 3D Objects Counter tool as well as the Measure tool. The 3D Objects Counter tool provided surface area and volume measurements while the Measure tool provided perimeter, area, and major axis measurements, which were used to calculate filament index.</p><p>To calculate sarcomere lengths, SHG images were first imported into ImageJ, and then, using the Freehand selection tool, two lines were drawn to indicate the outer boundaries (top and bottom) of the muscle fiber being analyzed. The Freehand selections were converted into .txt files and imported into LabVIEW VI. Using LabVIEW, the midline of the two selections (top and bottom) was determined. The midline was then imported back into ImageJ over the original photo such that it was positioned in the center of the sarcomeres. Next, the Plot Profile tool and Peak Finder tool were used to determine the peaks, which correspond to sarcomere length. Since the Peak Finder tool gives the distance in pixels, a conversion factor was used to convert pixels to micrometers based on the objective and optical zoom used. Multiple muscle fibers are analyzed for each zebrafish. We avoided the optical illusion effect of ESH veneers regions when measuring sarcomere lengths (<xref ref-type="bibr" rid="bib29">Dempsey et al., 2015</xref>).</p></sec><sec id="s4-10"><title>RNA extraction and RNAseq</title><p>Total RNA was extracted from whole zebrafish at 7 dpf from replicate samples using the Zymo Direct-zol RNA microprep kit. Each biological replicate consisted of two zebrafish. For WT siblings, there were 4 replicates for the control group and 3 replicates for the eNMES group, and for <italic>dmd</italic> mutants, there were 8 replicates for the control group and 10 replicates for the eNMES group. Prior to performing RNA extractions, zebrafish within the eNMES and control groups were grouped based on their severity at disease onset and the calculated change in their birefringence from 5 dpf to 7 dpf. RNA was kept at –80°C until it was shipped to Quick Biology (Pasadena, CA) for sequencing. Following RNA quality control using an Agilent BioAnalyzer 2100 (), polyA+RNAseq libraries were prepared for each sample using the KAPA Stranded RNA-Seq Kit (KAPA Biosystems, Wilmington, MA). Final library quality and quantity were analyzed by Agilent Bioanalyzer 2100 and Life Technologies Qubit3.0 Fluorometer. Each library was sequenced using 150 bp paired-end reads using an Illumina HiSeq4000 (Illumnia Inc, San Diego, CA).</p><p>Analyses of RNAseq reads were completed on the Advanced Computing Group Linux cluster at the University of Maine. To determine the quality of the RNA sequencing reads before further processing, FastQC version 0.11.7 was utilized. Following this quality assessment, reads were concatenated tail-to-head to produce one forward FASTQ file and one reverse FASTQ file for each sample. These FASTQ files were then trimmed of adapter sequences, and low-quality leading and trailing ends were removed using Trimmomatic version 0.36.0 (<xref ref-type="bibr" rid="bib11">Bolger et al., 2014</xref>). Trimmed paired-end reads mapped to the Ensembl-annotated zebrafish transcriptome (Ensembl version 95) to generate read counts per gene using RSEM version 1.2.31 (<xref ref-type="bibr" rid="bib61">Li and Dewey, 2011</xref>) with bowtie version 1.1.2 (<xref ref-type="bibr" rid="bib59">Langmead et al., 2009</xref>). Read counts were analyzed using the DESeq2 version 1.22.2 (<xref ref-type="bibr" rid="bib64">Love et al., 2014</xref>) to analyze gene expression, p-value, and FDR. Genes with fewer than te10 mapped reads across all samples were excluded. For each pairwise comparison of treatment groups, differentially expressed genes were determined using FDR p-value cutoff of 0.1 and requiring at least a 0.6 log<sub>2</sub> fold change (in either direction). Resulting lists were used for GO enrichment analysis and set analysis for each pairwise comparison.</p><p>Sets of differentially expressed genes (both increased and decreased expression) were analyzed to test for enriched GO Biological Process terms (FDR &lt; 0.1) using GOrilla (<ext-link ext-link-type="uri" xlink:href="http://cbl-gorilla.cs.technion.ac.il/">http://cbl-gorilla.cs.technion.ac.il/</ext-link>). For this analysis, the entire set of expressed genes were used as a background. In cases where GOrilla found no enriched terms, PantherDB’s overrepresentation test on Biological Processes (<ext-link ext-link-type="uri" xlink:href="http://pantherdb.org/">http://pantherdb.org/</ext-link>) was used. Again, the entire set of expressed genes list was used as the background, and results were evaluated using Panther’s Fisher’s exact test and p-values were adjusted for multiple testing using FDR.</p><p>Ensembl gene IDs were mapped to gene symbols and names using zebrafishMine’sAnalyse feature (<ext-link ext-link-type="uri" xlink:href="http://www.zebrafishmine.org/">http://www.zebrafishmine.org/</ext-link>). In some cases, manual mapping was used by comparing Zfin.org gene search and Ensembl gene search results. Summarized gene expression data are available at the Gene Expression Omnibus (accession number GSE155465), and FASTQ files are available at the Short Read Archive (accession number SRP274405).</p></sec><sec id="s4-11"><title>Cell adhesion</title><p>Muscle fiber attachment strength was assessed similarly to that published by <xref ref-type="bibr" rid="bib90">Subramanian and Schilling, 2014</xref>. Zebrafish larvae were anesthetized with tricaine (612 µM in 1× ERM) for 4 min and then placed in the NMES gym. The stimulator settings were adjusted such that the frequency was four pulses per second, the delay was 60 ms, the duration was 2 ms, and the voltage was 30 V. Zebrafish were stimulated for 1 min. Birefringence images were taken pre- and post-stimulation as was described for the EBD study. Zebrafish were then subjected to a second round of stimulation, and birefringence images were taken after this second round (<xref ref-type="fig" rid="fig9">Figure 9</xref>). Zebrafish were mounted laterally with the head on the left and dorsal up and the same imaging parameters were used for all zebrafish.</p></sec><sec id="s4-12"><title>Statistical analysis</title><p>All statistical analyses were performed in GraphPad Prism. Normality was first assessed for all data using the Shapiro–Wilk test. If data passed this normality test, an unpaired two-tailed <italic>t</italic>-test was performed between two datasets (i.e., <italic>dmd</italic> mutant control versus <italic>dmd</italic> mutant eNMES) while an ordinary one-way ANOVA was performed followed by a Tukey’s multiple comparison test between three datasets (i.e., WT sibling control versus <italic>dmd</italic> mutant control versus <italic>dmd</italic> mutant eNMES). Conversely, if data failed the Shapiro–Wilk normality test, a Mann–Whitney <italic>U</italic> test was performed for comparing two datasets while a Kruskal–Wallis test was performed for comparing three datasets. Significance for all tests was set to p&lt;0.05.</p></sec></sec></body><back><sec id="s5" sec-type="additional-information"><title>Additional information</title><fn-group content-type="competing-interest"><title>Competing interests</title><fn fn-type="COI-statement" id="conf1"><p>No competing interests declared</p></fn><fn fn-type="COI-statement" id="conf2"><p>No competing interests declared</p></fn></fn-group><fn-group content-type="author-contribution"><title>Author contributions</title><fn fn-type="con" id="con1"><p>Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Supervision, Writing – original draft, Writing – review and editing</p></fn><fn fn-type="con" id="con2"><p>Formal analysis, Investigation, Visualization, Writing – review and editing</p></fn><fn fn-type="con" id="con3"><p>Formal analysis, Investigation</p></fn><fn fn-type="con" id="con4"><p>Formal analysis, Investigation</p></fn><fn fn-type="con" id="con5"><p>Formal analysis, Investigation</p></fn><fn fn-type="con" id="con6"><p>Investigation</p></fn><fn fn-type="con" id="con7"><p>Formal analysis</p></fn><fn fn-type="con" id="con8"><p>Formal analysis, Investigation</p></fn><fn fn-type="con" id="con9"><p>Formal analysis, Software</p></fn><fn fn-type="con" id="con10"><p>Investigation</p></fn><fn fn-type="con" id="con11"><p>Investigation</p></fn><fn fn-type="con" id="con12"><p>Formal analysis, Investigation</p></fn><fn fn-type="con" id="con13"><p>Data curation</p></fn><fn fn-type="con" id="con14"><p>Methodology, Software</p></fn><fn fn-type="con" id="con15"><p>Conceptualization, Data curation, Formal analysis, Funding acquisition, Project administration, Supervision, Visualization, Writing – original draft, Writing – review and editing</p></fn></fn-group><fn-group content-type="ethics-information"><title>Ethics</title><fn fn-type="other"><p>This study was performed in strict accordance with the recommendations in the Guide for the Care and Use of Laboratory Animals of the National Institutes of Health. All of the animals were handled according to approved institutional animal care and use committee (IACUC) protocol A2020-06-01 of the University of Maine.</p></fn></fn-group></sec><sec id="s6" sec-type="supplementary-material"><title>Additional files</title><supplementary-material id="transrepform"><label>Transparent reporting form</label><media mime-subtype="docx" mimetype="application" xlink:href="elife-62760-transrepform1-v1.docx"/></supplementary-material><supplementary-material id="sdata1"><label>Source data 1.</label><caption><title>Source data are organized by figure with titles of the measurements in the columns and sheets are named with the appropriate figure.</title><p>Titles of panels also include the figure panel that the data is for.</p></caption><media mime-subtype="xlsx" mimetype="application" xlink:href="elife-62760-data1-v1.xlsx"/></supplementary-material></sec><sec id="s7" sec-type="data-availability"><title>Data availability</title><p>Summarized gene expression data are available at the Gene Expression Omnibus (accession number GSE155465), and FASTQ files are available at the Short Read Archive (accession number SRP274405).</p><p>The following datasets were generated:</p><p><element-citation id="dataset1" publication-type="data" specific-use="isSupplementedBy"><person-group person-group-type="author"><name><surname>King</surname><given-names>BL</given-names></name></person-group><year iso-8601-date="2020">2020</year><data-title>Expression profiling by high throughput sequencing</data-title><source>NCBI Gene Expression Omnibus</source><pub-id pub-id-type="accession" xlink:href="https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE155465">GSE155465</pub-id></element-citation></p><p><element-citation id="dataset2" publication-type="data" specific-use="isSupplementedBy"><person-group person-group-type="author"><name><surname>King</surname><given-names>BL</given-names></name></person-group><year iso-8601-date="2020">2020</year><data-title>FASTQ files</data-title><source>NCBI Sequence Read Archive</source><pub-id pub-id-type="accession" xlink:href="https://www.ncbi.nlm.nih.gov/sra/?term=SRP274405">SRP274405</pub-id></element-citation></p></sec><ack id="ack"><title>Acknowledgements</title><p>We thank Drs. Sharon Amacher and Jared Talbot for developing the transgenic 3MuscleGlow zebrafish and sharing this valuable tool with us; Dr. Joy-El Talbot at Iris Data Solutions for her expertise in RNAseq analysis; NVIDIA Corporation for donating the Quadro P6000 used for deep learning analyses; Keegan Kilroy for designing the NMES gym and assistance with designing the NMES paradigms; and Mark Nilan for exceptional zebrafish care at the UMaine Zebrafish Facility.</p></ack><ref-list><title>References</title><ref id="bib1"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Alamer</surname><given-names>A</given-names></name><name><surname>Melese</surname><given-names>H</given-names></name><name><surname>Nigussie</surname><given-names>F</given-names></name></person-group><year iso-8601-date="2020">2020</year><article-title>Effectiveness of Neuromuscular Electrical Stimulation on Post-Stroke Dysphagia: A Systematic Review of Randomized Controlled Trials</article-title><source>Clinical Interventions in Aging</source><volume>15</volume><fpage>1521</fpage><lpage>1531</lpage><pub-id pub-id-type="doi">10.2147/CIA.S262596</pub-id><pub-id pub-id-type="pmid">32943855</pub-id></element-citation></ref><ref id="bib2"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Alderton</surname><given-names>JM</given-names></name><name><surname>Steinhardt</surname><given-names>RA</given-names></name></person-group><year iso-8601-date="2000">2000</year><article-title>How calcium influx through calcium leak channels is responsible for the elevated levels of calcium-dependent proteolysis in dystrophic myotubes</article-title><source>Trends in Cardiovascular Medicine</source><volume>10</volume><fpage>268</fpage><lpage>272</lpage><pub-id pub-id-type="doi">10.1016/s1050-1738(00)00075-x</pub-id><pub-id pub-id-type="pmid">11282306</pub-id></element-citation></ref><ref id="bib3"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Alemdaroğlu</surname><given-names>I</given-names></name><name><surname>Karaduman</surname><given-names>A</given-names></name><name><surname>Yilmaz</surname><given-names>ÖT</given-names></name><name><surname>Topaloğlu</surname><given-names>H</given-names></name></person-group><year iso-8601-date="2015">2015</year><article-title>Different types of upper extremity exercise training in Duchenne muscular dystrophy: effects on functional performance, strength, endurance, and ambulation</article-title><source>Muscle &amp; Nerve</source><volume>51</volume><fpage>697</fpage><lpage>705</lpage><pub-id pub-id-type="doi">10.1002/mus.24451</pub-id><pub-id pub-id-type="pmid">25196721</pub-id></element-citation></ref><ref id="bib4"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Anziska</surname><given-names>Y</given-names></name><name><surname>Sternberg</surname><given-names>A</given-names></name></person-group><year iso-8601-date="2013">2013</year><article-title>Exercise in neuromuscular disease: Exercise in Neuromuscular Disease</article-title><source>Muscle &amp; Nerve</source><volume>48</volume><fpage>3</fpage><lpage>20</lpage><pub-id pub-id-type="doi">10.1002/mus.23771</pub-id><pub-id pub-id-type="pmid">23695822</pub-id></element-citation></ref><ref id="bib5"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Bailey</surname><given-names>EC</given-names></name><name><surname>Alrowaished</surname><given-names>SS</given-names></name><name><surname>Kilroy</surname><given-names>EA</given-names></name><name><surname>Crooks</surname><given-names>ES</given-names></name><name><surname>Drinkert</surname><given-names>DM</given-names></name><name><surname>Karunasiri</surname><given-names>CM</given-names></name><name><surname>Belanger</surname><given-names>JJ</given-names></name><name><surname>Khalil</surname><given-names>A</given-names></name><name><surname>Kelley</surname><given-names>JB</given-names></name><name><surname>Henry</surname><given-names>CA</given-names></name></person-group><year iso-8601-date="2019">2019</year><article-title>NAD+ improves neuromuscular development in a zebrafish model of FKRP-associated dystroglycanopathy</article-title><source>Skeletal Muscle</source><volume>9</volume><elocation-id>21</elocation-id><pub-id pub-id-type="doi">10.1186/s13395-019-0206-1</pub-id><pub-id pub-id-type="pmid">31391079</pub-id></element-citation></ref><ref id="bib6"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Baltgalvis</surname><given-names>KA</given-names></name><name><surname>Call</surname><given-names>JA</given-names></name><name><surname>Cochrane</surname><given-names>GD</given-names></name><name><surname>Laker</surname><given-names>RC</given-names></name><name><surname>Yan</surname><given-names>Z</given-names></name><name><surname>Lowe</surname><given-names>DA</given-names></name></person-group><year iso-8601-date="2012">2012</year><article-title>Exercise training improves plantar flexor muscle function in mdx mice</article-title><source>Medicine and Science in Sports and Exercise</source><volume>44</volume><fpage>1671</fpage><lpage>1679</lpage><pub-id pub-id-type="doi">10.1249/MSS.0b013e31825703f0</pub-id><pub-id pub-id-type="pmid">22460476</pub-id></element-citation></ref><ref id="bib7"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Barnard</surname><given-names>EA</given-names></name><name><surname>Barnard</surname><given-names>PJ</given-names></name><name><surname>Jarvis</surname><given-names>JC</given-names></name><name><surname>Lai</surname><given-names>J</given-names></name></person-group><year iso-8601-date="1986">1986</year><article-title>Low frequency chronic electrical stimulation of normal and dystrophic chicken muscle</article-title><source>The Journal of Physiology</source><volume>376</volume><fpage>377</fpage><lpage>409</lpage><pub-id pub-id-type="doi">10.1113/jphysiol.1986.sp016159</pub-id><pub-id pub-id-type="pmid">3795078</pub-id></element-citation></ref><ref id="bib8"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Bassett</surname><given-names>DI</given-names></name><name><surname>Bryson-Richardson</surname><given-names>RJ</given-names></name><name><surname>Daggett</surname><given-names>DF</given-names></name><name><surname>Gautier</surname><given-names>P</given-names></name><name><surname>Keenan</surname><given-names>DG</given-names></name><name><surname>Currie</surname><given-names>PD</given-names></name></person-group><year iso-8601-date="2003">2003</year><article-title>Dystrophin is required for the formation of stable muscle attachments in the zebrafish embryo</article-title><source>Development (Cambridge, England)</source><volume>130</volume><fpage>5851</fpage><lpage>5860</lpage><pub-id pub-id-type="doi">10.1242/dev.00799</pub-id><pub-id pub-id-type="pmid">14573513</pub-id></element-citation></ref><ref id="bib9"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Berger</surname><given-names>J</given-names></name><name><surname>Berger</surname><given-names>S</given-names></name><name><surname>Hall</surname><given-names>TE</given-names></name><name><surname>Lieschke</surname><given-names>GJ</given-names></name><name><surname>Currie</surname><given-names>PD</given-names></name></person-group><year iso-8601-date="2010">2010</year><article-title>Dystrophin-deficient zebrafish feature aspects of the Duchenne muscular dystrophy pathology</article-title><source>Neuromuscular Disorders</source><volume>20</volume><fpage>826</fpage><lpage>832</lpage><pub-id pub-id-type="doi">10.1016/j.nmd.2010.08.004</pub-id><pub-id pub-id-type="pmid">20850317</pub-id></element-citation></ref><ref id="bib10"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Berger</surname><given-names>J</given-names></name><name><surname>Sztal</surname><given-names>T</given-names></name><name><surname>Currie</surname><given-names>PD</given-names></name></person-group><year iso-8601-date="2012">2012</year><article-title>Quantification of birefringence readily measures the level of muscle damage in zebrafish</article-title><source>Biochemical and Biophysical Research Communications</source><volume>423</volume><fpage>785</fpage><lpage>788</lpage><pub-id pub-id-type="doi">10.1016/j.bbrc.2012.06.040</pub-id><pub-id pub-id-type="pmid">22713473</pub-id></element-citation></ref><ref id="bib11"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Bolger</surname><given-names>AM</given-names></name><name><surname>Lohse</surname><given-names>M</given-names></name><name><surname>Usadel</surname><given-names>B</given-names></name></person-group><year iso-8601-date="2014">2014</year><article-title>Trimmomatic: a flexible trimmer for Illumina sequence data</article-title><source>Bioinformatics (Oxford, England)</source><volume>30</volume><fpage>2114</fpage><lpage>2120</lpage><pub-id pub-id-type="doi">10.1093/bioinformatics/btu170</pub-id><pub-id pub-id-type="pmid">24695404</pub-id></element-citation></ref><ref id="bib12"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Bonilla</surname><given-names>E</given-names></name><name><surname>Samitt</surname><given-names>CE</given-names></name><name><surname>Miranda</surname><given-names>AF</given-names></name><name><surname>Hays</surname><given-names>AP</given-names></name><name><surname>Salviati</surname><given-names>G</given-names></name><name><surname>DiMauro</surname><given-names>S</given-names></name><name><surname>Kunkel</surname><given-names>LM</given-names></name><name><surname>Hoffman</surname><given-names>EP</given-names></name><name><surname>Rowland</surname><given-names>LP</given-names></name></person-group><year iso-8601-date="1988">1988</year><article-title>Duchenne muscular dystrophy: deficiency of dystrophin at the muscle cell surface</article-title><source>Cell</source><volume>54</volume><fpage>447</fpage><lpage>452</lpage><pub-id pub-id-type="doi">10.1016/0092-8674(88)90065-7</pub-id><pub-id pub-id-type="pmid">3042151</pub-id></element-citation></ref><ref id="bib13"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Boppart</surname><given-names>MD</given-names></name><name><surname>Volker</surname><given-names>SE</given-names></name><name><surname>Alexander</surname><given-names>N</given-names></name><name><surname>Burkin</surname><given-names>DJ</given-names></name><name><surname>Kaufman</surname><given-names>SJ</given-names></name></person-group><year iso-8601-date="2008">2008</year><article-title>Exercise promotes ␣7 integrin gene transcription and protection of skeletal muscle 295:9</article-title><source>American Journal of Physiology. Regulatory, Integrative and Comparative Physiology</source><volume>295</volume><fpage>R1623</fpage><lpage>R1630</lpage><pub-id pub-id-type="doi">10.1152/ajpregu.00089.2008</pub-id><pub-id pub-id-type="pmid">18784336</pub-id></element-citation></ref><ref id="bib14"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Bruusgaard</surname><given-names>JC</given-names></name><name><surname>Liestøl</surname><given-names>K</given-names></name><name><surname>Ekmark</surname><given-names>M</given-names></name><name><surname>Kollstad</surname><given-names>K</given-names></name><name><surname>Gundersen</surname><given-names>K</given-names></name></person-group><year iso-8601-date="2003">2003</year><article-title>Number and spatial distribution of nuclei in the muscle fibres of normal mice studied in vivo</article-title><source>The Journal of Physiology</source><volume>551</volume><fpage>467</fpage><lpage>478</lpage><pub-id pub-id-type="doi">10.1113/jphysiol.2003.045328</pub-id><pub-id pub-id-type="pmid">12813146</pub-id></element-citation></ref><ref id="bib15"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Burdi</surname><given-names>R</given-names></name><name><surname>Rolland</surname><given-names>JF</given-names></name><name><surname>Fraysse</surname><given-names>B</given-names></name><name><surname>Litvinova</surname><given-names>K</given-names></name><name><surname>Cozzoli</surname><given-names>A</given-names></name><name><surname>Giannuzzi</surname><given-names>V</given-names></name><name><surname>Liantonio</surname><given-names>A</given-names></name><name><surname>Camerino</surname><given-names>GM</given-names></name><name><surname>Sblendorio</surname><given-names>V</given-names></name><name><surname>Capogrosso</surname><given-names>RF</given-names></name><name><surname>Palmieri</surname><given-names>B</given-names></name><name><surname>Andreetta</surname><given-names>F</given-names></name><name><surname>Confalonieri</surname><given-names>P</given-names></name><name><surname>De Benedictis</surname><given-names>L</given-names></name><name><surname>Montagnani</surname><given-names>M</given-names></name><name><surname>De Luca</surname><given-names>A</given-names></name></person-group><year iso-8601-date="2009">2009</year><article-title>Multiple pathological events in exercised dystrophic mdx mice are targeted by pentoxifylline: outcome of a large array of in vivo and ex vivo tests</article-title><source>Journal of Applied Physiology (Bethesda, Md</source><volume>106</volume><fpage>1311</fpage><lpage>1324</lpage><pub-id pub-id-type="doi">10.1152/japplphysiol.90985.2008</pub-id><pub-id pub-id-type="pmid">19131478</pub-id></element-citation></ref><ref id="bib16"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Burkin</surname><given-names>DJ</given-names></name><name><surname>Wallace</surname><given-names>GQ</given-names></name><name><surname>Nicol</surname><given-names>KJ</given-names></name><name><surname>Kaufman</surname><given-names>DJ</given-names></name><name><surname>Kaufman</surname><given-names>SJ</given-names></name></person-group><year iso-8601-date="2001">2001</year><article-title>Enhanced expression of the alpha 7 beta 1 integrin reduces muscular dystrophy and restores viability in dystrophic mice</article-title><source>The Journal of Cell Biology</source><volume>152</volume><fpage>1207</fpage><lpage>1218</lpage><pub-id pub-id-type="doi">10.1083/jcb.152.6.1207</pub-id><pub-id pub-id-type="pmid">11257121</pub-id></element-citation></ref><ref id="bib17"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Burkin</surname><given-names>DJ</given-names></name><name><surname>Wallace</surname><given-names>GQ</given-names></name><name><surname>Milner</surname><given-names>DJ</given-names></name><name><surname>Chaney</surname><given-names>EJ</given-names></name><name><surname>Mulligan</surname><given-names>JA</given-names></name><name><surname>Kaufman</surname><given-names>SJ</given-names></name></person-group><year iso-8601-date="2005">2005</year><article-title>Transgenic expression of {alpha}7{beta}1 integrin maintains muscle integrity, increases regenerative capacity, promotes hypertrophy, and reduces cardiomyopathy in dystrophic mice</article-title><source>The American Journal of Pathology</source><volume>166</volume><fpage>253</fpage><lpage>263</lpage><pub-id pub-id-type="doi">10.1016/s0002-9440(10)62249-3</pub-id><pub-id pub-id-type="pmid">15632017</pub-id></element-citation></ref><ref id="bib18"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Bushby</surname><given-names>K</given-names></name><name><surname>Finkel</surname><given-names>R</given-names></name><name><surname>Birnkrant</surname><given-names>DJ</given-names></name><name><surname>Case</surname><given-names>LE</given-names></name><name><surname>Clemens</surname><given-names>PR</given-names></name><name><surname>Cripe</surname><given-names>L</given-names></name><name><surname>Kaul</surname><given-names>A</given-names></name><name><surname>Kinnett</surname><given-names>K</given-names></name><name><surname>McDonald</surname><given-names>C</given-names></name><name><surname>Pandya</surname><given-names>S</given-names></name><name><surname>Poysky</surname><given-names>J</given-names></name><name><surname>Shapiro</surname><given-names>F</given-names></name><name><surname>Tomezsko</surname><given-names>J</given-names></name><name><surname>Constantin</surname><given-names>C</given-names></name><collab>DMD Care Considerations Working Group</collab></person-group><year iso-8601-date="2010">2010</year><article-title>Diagnosis and management of Duchenne muscular dystrophy, part 2: implementation of multidisciplinary care</article-title><source>The Lancet. Neurology</source><volume>9</volume><fpage>177</fpage><lpage>189</lpage><pub-id pub-id-type="doi">10.1016/S1474-4422(09)70272-8</pub-id><pub-id pub-id-type="pmid">19945914</pub-id></element-citation></ref><ref id="bib19"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Call</surname><given-names>JA</given-names></name><name><surname>Voelker</surname><given-names>KA</given-names></name><name><surname>Wolff</surname><given-names>AV</given-names></name><name><surname>McMillan</surname><given-names>RP</given-names></name><name><surname>Evans</surname><given-names>NP</given-names></name><name><surname>Hulver</surname><given-names>MW</given-names></name><name><surname>Talmadge</surname><given-names>RJ</given-names></name><name><surname>Grange</surname><given-names>RW</given-names></name></person-group><year iso-8601-date="2008">2008</year><article-title>Endurance capacity in maturing mdx mice is markedly enhanced by combined voluntary wheel running and green tea extract</article-title><source>Journal of Applied Physiology (Bethesda, Md</source><volume>105</volume><fpage>923</fpage><lpage>932</lpage><pub-id pub-id-type="doi">10.1152/japplphysiol.00028.2008</pub-id><pub-id pub-id-type="pmid">18583385</pub-id></element-citation></ref><ref id="bib20"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Chan</surname><given-names>MC</given-names></name><name><surname>Ziegler</surname><given-names>O</given-names></name><name><surname>Liu</surname><given-names>L</given-names></name><name><surname>Rowe</surname><given-names>GC</given-names></name><name><surname>Das</surname><given-names>S</given-names></name><name><surname>Otterbein</surname><given-names>LE</given-names></name><name><surname>Arany</surname><given-names>Z</given-names></name></person-group><year iso-8601-date="2016">2016</year><article-title>Heme oxygenase and carbon monoxide protect from muscle dystrophy</article-title><source>Skeletal Muscle</source><volume>6</volume><elocation-id>41</elocation-id><pub-id pub-id-type="doi">10.1186/s13395-016-0114-6</pub-id><pub-id pub-id-type="pmid">27906108</pub-id></element-citation></ref><ref id="bib21"><element-citation publication-type="preprint"><person-group person-group-type="author"><name><surname>Chen</surname><given-names>LC</given-names></name><name><surname>Papandreou</surname><given-names>G</given-names></name><name><surname>Schroff</surname><given-names>F</given-names></name><name><surname>Adam</surname><given-names>H</given-names></name></person-group><year iso-8601-date="2017">2017</year><article-title>Rethinking Atrous Convolution for Semantic Image Segmentation</article-title><source>arXiv</source><pub-id pub-id-type="doi">10.48550/arXiv.1706.05587</pub-id></element-citation></ref><ref id="bib22"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Chisari</surname><given-names>C</given-names></name><name><surname>Bertolucci</surname><given-names>F</given-names></name><name><surname>Dalise</surname><given-names>S</given-names></name><name><surname>Rossi</surname><given-names>B</given-names></name></person-group><year iso-8601-date="2013">2013</year><article-title>Chronic muscle stimulation improves muscle function and reverts the abnormal surface EMG pattern in Myotonic Dystrophy: a pilot study</article-title><source>Journal of Neuroengineering and Rehabilitation</source><volume>10</volume><elocation-id>94</elocation-id><pub-id pub-id-type="doi">10.1186/1743-0003-10-94</pub-id><pub-id pub-id-type="pmid">23938156</pub-id></element-citation></ref><ref id="bib23"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Coffey</surname><given-names>EC</given-names></name><name><surname>Astumian</surname><given-names>M</given-names></name><name><surname>Alrowaished</surname><given-names>SS</given-names></name><name><surname>Schaffer</surname><given-names>C</given-names></name><name><surname>Henry</surname><given-names>CA</given-names></name></person-group><year iso-8601-date="2021">2021</year><article-title>Lysosomal Function Impacts the Skeletal Muscle Extracellular Matrix</article-title><source>Journal of Developmental Biology</source><volume>9</volume><elocation-id>52</elocation-id><pub-id pub-id-type="doi">10.3390/jdb9040052</pub-id><pub-id pub-id-type="pmid">34842731</pub-id></element-citation></ref><ref id="bib24"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Coles</surname><given-names>CA</given-names></name><name><surname>Gordon</surname><given-names>L</given-names></name><name><surname>Hunt</surname><given-names>LC</given-names></name><name><surname>Webster</surname><given-names>T</given-names></name><name><surname>Piers</surname><given-names>AT</given-names></name><name><surname>Kintakas</surname><given-names>C</given-names></name><name><surname>Woodman</surname><given-names>K</given-names></name><name><surname>Touslon</surname><given-names>SL</given-names></name><name><surname>Smythe</surname><given-names>GM</given-names></name><name><surname>White</surname><given-names>JD</given-names></name><name><surname>Lamandé</surname><given-names>SR</given-names></name></person-group><year iso-8601-date="2020">2020</year><article-title>Expression profiling in exercised mdx suggests a role for extracellular proteins in the dystrophic muscle immune response</article-title><source>Human Molecular Genetics</source><volume>29</volume><fpage>353</fpage><lpage>368</lpage><pub-id pub-id-type="doi">10.1093/hmg/ddz266</pub-id><pub-id pub-id-type="pmid">31696230</pub-id></element-citation></ref><ref id="bib25"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Constantin</surname><given-names>B</given-names></name></person-group><year iso-8601-date="2014">2014</year><article-title>Dystrophin complex functions as a scaffold for signalling proteins</article-title><source>Biochimica et Biophysica Acta</source><volume>1838</volume><fpage>635</fpage><lpage>642</lpage><pub-id pub-id-type="doi">10.1016/j.bbamem.2013.08.023</pub-id><pub-id pub-id-type="pmid">24021238</pub-id></element-citation></ref><ref id="bib26"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Csapo</surname><given-names>R</given-names></name><name><surname>Gumpenberger</surname><given-names>M</given-names></name><name><surname>Wessner</surname><given-names>B</given-names></name></person-group><year iso-8601-date="2020">2020</year><article-title>Skeletal Muscle Extracellular Matrix – What Do We Know About Its Composition</article-title><source>Regulation, and Physiological Roles? A Narrative Review. Front Physiol</source><volume>11</volume><elocation-id>e253</elocation-id><pub-id pub-id-type="doi">10.3389/fphys.2020.00253</pub-id></element-citation></ref><ref id="bib27"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Dangain</surname><given-names>J</given-names></name><name><surname>Vrbova</surname><given-names>G</given-names></name></person-group><year iso-8601-date="1989">1989</year><article-title>Long term effect of low frequency chronic electrical stimulation on the fast hind limb muscles of dystrophic mice</article-title><source>Journal of Neurology, Neurosurgery, and Psychiatry</source><volume>52</volume><fpage>1382</fpage><lpage>1389</lpage><pub-id pub-id-type="doi">10.1136/jnnp.52.12.1382</pub-id><pub-id pub-id-type="pmid">2614433</pub-id></element-citation></ref><ref id="bib28"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>de Freitas</surname><given-names>GR</given-names></name><name><surname>Szpoganicz</surname><given-names>C</given-names></name><name><surname>Ilha</surname><given-names>J</given-names></name></person-group><year iso-8601-date="2018">2018</year><article-title>Does Neuromuscular Electrical Stimulation Therapy Increase Voluntary Muscle Strength After Spinal Cord Injury? A Systematic Review</article-title><source>Topics in Spinal Cord Injury Rehabilitation</source><volume>24</volume><fpage>6</fpage><lpage>17</lpage><pub-id pub-id-type="doi">10.1310/sci16-00048</pub-id><pub-id pub-id-type="pmid">29434456</pub-id></element-citation></ref><ref id="bib29"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Dempsey</surname><given-names>WP</given-names></name><name><surname>Hodas</surname><given-names>NO</given-names></name><name><surname>Ponti</surname><given-names>A</given-names></name><name><surname>Pantazis</surname><given-names>P</given-names></name></person-group><year iso-8601-date="2015">2015</year><article-title>Determination of the source of SHG verniers in zebrafish skeletal muscle</article-title><source>Scientific Reports</source><volume>5</volume><elocation-id>18119</elocation-id><pub-id pub-id-type="doi">10.1038/srep18119</pub-id><pub-id pub-id-type="pmid">26657568</pub-id></element-citation></ref><ref id="bib30"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Dou</surname><given-names>Y</given-names></name><name><surname>Andersson-Lendahl</surname><given-names>M</given-names></name><name><surname>Arner</surname><given-names>A</given-names></name></person-group><year iso-8601-date="2008">2008</year><article-title>Structure and function of skeletal muscle in zebrafish early larvae</article-title><source>The Journal of General Physiology</source><volume>131</volume><fpage>445</fpage><lpage>453</lpage><pub-id pub-id-type="doi">10.1085/jgp.200809982</pub-id><pub-id pub-id-type="pmid">18443359</pub-id></element-citation></ref><ref id="bib31"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Dow</surname><given-names>DE</given-names></name><name><surname>Dennis</surname><given-names>RG</given-names></name><name><surname>Faulkner</surname><given-names>JA</given-names></name></person-group><year iso-8601-date="2005">2005</year><article-title>Electrical stimulation attenuates denervation and age-related atrophy in extensor digitorum longus muscles of old rats</article-title><source>The Journals of Gerontology. Series A, Biological Sciences and Medical Sciences</source><volume>60</volume><fpage>416</fpage><lpage>424</lpage><pub-id pub-id-type="doi">10.1093/gerona/60.4.416</pub-id><pub-id pub-id-type="pmid">15933378</pub-id></element-citation></ref><ref id="bib32"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Dowling</surname><given-names>JJ</given-names></name><name><surname>Vreede</surname><given-names>AP</given-names></name><name><surname>Low</surname><given-names>SE</given-names></name><name><surname>Gibbs</surname><given-names>EM</given-names></name><name><surname>Kuwada</surname><given-names>JY</given-names></name><name><surname>Bonnemann</surname><given-names>CG</given-names></name><name><surname>Feldman</surname><given-names>EL</given-names></name></person-group><year iso-8601-date="2009">2009</year><article-title>Loss of myotubularin function results in T-tubule disorganization in zebrafish and human myotubular myopathy</article-title><source>PLOS Genetics</source><volume>5</volume><elocation-id>e1000372</elocation-id><pub-id pub-id-type="doi">10.1371/journal.pgen.1000372</pub-id><pub-id pub-id-type="pmid">19197364</pub-id></element-citation></ref><ref id="bib33"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Duchenne</surname><given-names>GB</given-names></name></person-group><year iso-8601-date="1870">1870</year><article-title>A Treatise on Localized Electrization and it’s Applications to Pathology and Therapeutics</article-title><source>Therapeutics</source><volume>1</volume><elocation-id>24567</elocation-id><pub-id pub-id-type="doi">10.5962/bhl.title.24567</pub-id></element-citation></ref><ref id="bib34"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Ervasti</surname><given-names>JM</given-names></name><name><surname>Campbell</surname><given-names>KP</given-names></name></person-group><year iso-8601-date="1991">1991</year><article-title>Membrane organization of the dystrophin-glycoprotein complex</article-title><source>Cell</source><volume>66</volume><fpage>1121</fpage><lpage>1131</lpage><pub-id pub-id-type="doi">10.1016/0092-8674(91)90035-w</pub-id><pub-id pub-id-type="pmid">1913804</pub-id></element-citation></ref><ref id="bib35"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Faist</surname><given-names>V</given-names></name><name><surname>König</surname><given-names>J</given-names></name><name><surname>Höger</surname><given-names>H</given-names></name><name><surname>Elmadfa</surname><given-names>I</given-names></name></person-group><year iso-8601-date="2001">2001</year><article-title>Decreased mitochondrial oxygen consumption and antioxidant enzyme activities in skeletal muscle of dystrophic mice after low-intensity exercise</article-title><source>Annals of Nutrition &amp; Metabolism</source><volume>45</volume><fpage>58</fpage><lpage>66</lpage><pub-id pub-id-type="doi">10.1159/000046707</pub-id><pub-id pub-id-type="pmid">11359030</pub-id></element-citation></ref><ref id="bib36"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Folker</surname><given-names>ES</given-names></name><name><surname>Baylies</surname><given-names>MK</given-names></name></person-group><year iso-8601-date="2013">2013</year><article-title>Nuclear positioning in muscle development and disease</article-title><source>Frontiers in Physiology</source><volume>4</volume><elocation-id>363</elocation-id><pub-id pub-id-type="doi">10.3389/fphys.2013.00363</pub-id><pub-id pub-id-type="pmid">24376424</pub-id></element-citation></ref><ref id="bib37"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Gaiad</surname><given-names>TP</given-names></name><name><surname>Oliveira</surname><given-names>MX</given-names></name><name><surname>Lobo</surname><given-names>AR</given-names></name><name><surname>Libório</surname><given-names>LR</given-names></name><name><surname>Pinto</surname><given-names>PAF</given-names></name><name><surname>Fernandes</surname><given-names>DC</given-names></name><name><surname>Santos</surname><given-names>AP</given-names></name><name><surname>Ambrósio</surname><given-names>CE</given-names></name><name><surname>Machado</surname><given-names>ASD</given-names></name></person-group><year iso-8601-date="2017">2017</year><article-title>Low-intensity training provokes adaptive extracellular matrix turnover of a muscular dystrophy model</article-title><source>Journal of Exercise Rehabilitation</source><volume>13</volume><fpage>693</fpage><lpage>703</lpage><pub-id pub-id-type="doi">10.12965/jer.1735094.547</pub-id><pub-id pub-id-type="pmid">29326902</pub-id></element-citation></ref><ref id="bib38"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Gailly</surname><given-names>P</given-names></name></person-group><year iso-8601-date="2002">2002</year><article-title>New aspects of calcium signaling in skeletal muscle cells: implications in Duchenne muscular dystrophy</article-title><source>Biochimica et Biophysica Acta</source><volume>1600</volume><fpage>38</fpage><lpage>44</lpage><pub-id pub-id-type="doi">10.1016/s1570-9639(02)00442-9</pub-id><pub-id pub-id-type="pmid">12445457</pub-id></element-citation></ref><ref id="bib39"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Gianola</surname><given-names>S</given-names></name><name><surname>Pecoraro</surname><given-names>V</given-names></name><name><surname>Lambiase</surname><given-names>S</given-names></name><name><surname>Gatti</surname><given-names>R</given-names></name><name><surname>Banfi</surname><given-names>G</given-names></name><name><surname>Moja</surname><given-names>L</given-names></name></person-group><year iso-8601-date="2013">2013</year><article-title>Efficacy of Muscle Exercise in Patients with Muscular Dystrophy: A Systematic Review Showing a Missed Opportunity to Improve Outcomes</article-title><source>PLOS ONE</source><volume>8</volume><elocation-id>e65414</elocation-id><pub-id pub-id-type="doi">10.1371/journal.pone.0065414</pub-id><pub-id pub-id-type="pmid">23894268</pub-id></element-citation></ref><ref id="bib40"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Gillis</surname><given-names>JM</given-names></name></person-group><year iso-8601-date="1996">1996</year><article-title>Membrane abnormalities and Ca homeostasis in muscles of the mdx mouse, an animal model of the Duchenne muscular dystrophy: a review</article-title><source>Acta Physiologica Scandinavica</source><volume>156</volume><fpage>397</fpage><lpage>406</lpage><pub-id pub-id-type="doi">10.1046/j.1365-201X.1996.201000.x</pub-id><pub-id pub-id-type="pmid">8729700</pub-id></element-citation></ref><ref id="bib41"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Gondin</surname><given-names>J</given-names></name><name><surname>Brocca</surname><given-names>L</given-names></name><name><surname>Bellinzona</surname><given-names>E</given-names></name><name><surname>D’Antona</surname><given-names>G</given-names></name><name><surname>Maffiuletti</surname><given-names>NA</given-names></name><name><surname>Miotti</surname><given-names>D</given-names></name><name><surname>Pellegrino</surname><given-names>MA</given-names></name><name><surname>Bottinelli</surname><given-names>R</given-names></name></person-group><year iso-8601-date="2011">2011</year><article-title>Neuromuscular electrical stimulation training induces atypical adaptations of the human skeletal muscle phenotype: a functional and proteomic analysis</article-title><source>Journal of Applied Physiology (Bethesda, Md</source><volume>110</volume><fpage>433</fpage><lpage>450</lpage><pub-id pub-id-type="doi">10.1152/japplphysiol.00914.2010</pub-id><pub-id pub-id-type="pmid">21127206</pub-id></element-citation></ref><ref id="bib42"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Goody</surname><given-names>MF</given-names></name><name><surname>Kelly</surname><given-names>MW</given-names></name><name><surname>Reynolds</surname><given-names>CJ</given-names></name><name><surname>Khalil</surname><given-names>A</given-names></name><name><surname>Crawford</surname><given-names>BD</given-names></name><name><surname>Henry</surname><given-names>CA</given-names></name></person-group><year iso-8601-date="2012">2012</year><article-title>NAD+ Biosynthesis Ameliorates a Zebrafish Model of Muscular Dystrophy</article-title><source>PLOS Biology</source><volume>10</volume><elocation-id>e1001409</elocation-id><pub-id pub-id-type="doi">10.1371/journal.pbio.1001409</pub-id><pub-id pub-id-type="pmid">23109907</pub-id></element-citation></ref><ref id="bib43"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Gordon</surname><given-names>AM</given-names></name><name><surname>Huxley</surname><given-names>AF</given-names></name><name><surname>Julian</surname><given-names>FJ</given-names></name></person-group><year iso-8601-date="1966">1966</year><article-title>The variation in isometric tension with sarcomere length in vertebrate muscle fibres</article-title><source>The Journal of Physiology</source><volume>184</volume><fpage>170</fpage><lpage>192</lpage><pub-id pub-id-type="doi">10.1113/jphysiol.1966.sp007909</pub-id><pub-id pub-id-type="pmid">5921536</pub-id></element-citation></ref><ref id="bib44"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Group</surname><given-names>T</given-names></name></person-group><year iso-8601-date="2017">2017</year><article-title>ALSUntangled 39: Acuscope (micro-Amp electrical muscle stimulation)</article-title><source>Amyotroph Lateral Scler Front Degener</source><volume>18</volume><fpage>466</fpage><lpage>469</lpage><pub-id pub-id-type="doi">10.1080/03007995.2017.1285468</pub-id><pub-id pub-id-type="pmid">28631960</pub-id></element-citation></ref><ref id="bib45"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Grzelkowska-Kowalczyk</surname><given-names>K</given-names></name></person-group><year iso-8601-date="2016">2016</year><article-title>The Importance of Extracellular Matrix in Skeletal Muscle Development and Function</article-title><source>Compos Funct Extracell Matrix Hum Body</source><volume>1</volume><elocation-id>2230</elocation-id><pub-id pub-id-type="doi">10.5772/62230</pub-id></element-citation></ref><ref id="bib46"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Guyon</surname><given-names>JR</given-names></name><name><surname>Mosley</surname><given-names>AN</given-names></name><name><surname>Zhou</surname><given-names>Y</given-names></name><name><surname>O’Brien</surname><given-names>KF</given-names></name><name><surname>Sheng</surname><given-names>X</given-names></name><name><surname>Chiang</surname><given-names>K</given-names></name><name><surname>Davidson</surname><given-names>AJ</given-names></name><name><surname>Volinski</surname><given-names>JM</given-names></name><name><surname>Zon</surname><given-names>LI</given-names></name><name><surname>Kunkel</surname><given-names>LM</given-names></name></person-group><year iso-8601-date="2003">2003</year><article-title>The dystrophin associated protein complex in zebrafish</article-title><source>Human Molecular Genetics</source><volume>12</volume><fpage>601</fpage><lpage>615</lpage><pub-id pub-id-type="doi">10.1093/hmg/ddg071</pub-id><pub-id pub-id-type="pmid">12620966</pub-id></element-citation></ref><ref id="bib47"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Handa</surname><given-names>I</given-names></name><name><surname>Matsushita</surname><given-names>N</given-names></name><name><surname>Ihashi</surname><given-names>K</given-names></name><name><surname>Yagi</surname><given-names>R</given-names></name><name><surname>Mochizuki</surname><given-names>R</given-names></name><name><surname>Mochizuki</surname><given-names>H</given-names></name><name><surname>Abe</surname><given-names>Y</given-names></name><name><surname>Shiga</surname><given-names>Y</given-names></name><name><surname>Hoshimiya</surname><given-names>N</given-names></name><name><surname>Itoyama</surname><given-names>Y</given-names></name></person-group><year iso-8601-date="1995">1995</year><article-title>A clinical trial of therapeutic electrical stimulation for amyotrophic lateral sclerosis</article-title><source>The Tohoku Journal of Experimental Medicine</source><volume>175</volume><fpage>123</fpage><lpage>134</lpage><pub-id pub-id-type="doi">10.1620/tjem.175.123</pub-id><pub-id pub-id-type="pmid">7597693</pub-id></element-citation></ref><ref id="bib48"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Hoffman</surname><given-names>EP</given-names></name><name><surname>Knudson</surname><given-names>CM</given-names></name><name><surname>Campbell</surname><given-names>KP</given-names></name><name><surname>Kunkel</surname><given-names>LM</given-names></name></person-group><year iso-8601-date="1987">1987</year><article-title>Subcellular fractionation of dystrophin to the triads of skeletal muscle</article-title><source>Nature</source><volume>330</volume><fpage>754</fpage><lpage>758</lpage><pub-id pub-id-type="doi">10.1038/330754a0</pub-id><pub-id pub-id-type="pmid">2447503</pub-id></element-citation></ref><ref id="bib49"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Hromowyk</surname><given-names>KJ</given-names></name><name><surname>Talbot</surname><given-names>JC</given-names></name><name><surname>Martin</surname><given-names>BL</given-names></name><name><surname>Janssen</surname><given-names>PML</given-names></name><name><surname>Amacher</surname><given-names>SL</given-names></name></person-group><year iso-8601-date="2020">2020</year><article-title>Cell fusion is differentially regulated in zebrafish post-embryonic slow and fast muscle</article-title><source>Developmental Biology</source><volume>462</volume><fpage>85</fpage><lpage>100</lpage><pub-id pub-id-type="doi">10.1016/j.ydbio.2020.03.005</pub-id><pub-id pub-id-type="pmid">32165147</pub-id></element-citation></ref><ref id="bib50"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Huang</surname><given-names>S-H</given-names></name><name><surname>Hsiao</surname><given-names>C-D</given-names></name><name><surname>Lin</surname><given-names>D-S</given-names></name><name><surname>Chow</surname><given-names>C-Y</given-names></name><name><surname>Chang</surname><given-names>C-J</given-names></name><name><surname>Liau</surname><given-names>I</given-names></name></person-group><year iso-8601-date="2011">2011</year><article-title>Imaging of zebrafish in vivo with second-harmonic generation reveals shortened sarcomeres associated with myopathy induced by statin</article-title><source>PLOS ONE</source><volume>6</volume><elocation-id>e24764</elocation-id><pub-id pub-id-type="doi">10.1371/journal.pone.0024764</pub-id><pub-id pub-id-type="pmid">21966365</pub-id></element-citation></ref><ref id="bib51"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Hulmi</surname><given-names>JJ</given-names></name><name><surname>Oliveira</surname><given-names>BM</given-names></name><name><surname>Silvennoinen</surname><given-names>M</given-names></name><name><surname>Hoogaars</surname><given-names>WMH</given-names></name><name><surname>Pasternack</surname><given-names>A</given-names></name><name><surname>Kainulainen</surname><given-names>H</given-names></name><name><surname>Ritvos</surname><given-names>O</given-names></name></person-group><year iso-8601-date="2013">2013</year><article-title>Exercise restores decreased physical activity levels and increases markers of autophagy and oxidative capacity in myostatin/activin-blocked mdx mice</article-title><source>American Journal of Physiology. Endocrinology and Metabolism</source><volume>305</volume><fpage>E171</fpage><lpage>E182</lpage><pub-id pub-id-type="doi">10.1152/ajpendo.00065.2013</pub-id><pub-id pub-id-type="pmid">23695214</pub-id></element-citation></ref><ref id="bib52"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Humphrey</surname><given-names>JD</given-names></name><name><surname>Dufresne</surname><given-names>ER</given-names></name><name><surname>Schwartz</surname><given-names>MA</given-names></name></person-group><year iso-8601-date="2014">2014</year><article-title>Mechanotransduction and extracellular matrix homeostasis</article-title><source>Nature Reviews. Molecular Cell Biology</source><volume>15</volume><fpage>802</fpage><lpage>812</lpage><pub-id pub-id-type="doi">10.1038/nrm3896</pub-id><pub-id pub-id-type="pmid">25355505</pub-id></element-citation></ref><ref id="bib53"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Hyzewicz</surname><given-names>J</given-names></name><name><surname>Ruegg</surname><given-names>UT</given-names></name><name><surname>Takeda</surname><given-names>S</given-names></name></person-group><year iso-8601-date="2015">2015</year><article-title>Comparison of Experimental Protocols of Physical Exercise for mdx Mice and Duchenne Muscular Dystrophy Patients</article-title><source>Journal of Neuromuscular Diseases</source><volume>2</volume><fpage>325</fpage><lpage>342</lpage><pub-id pub-id-type="doi">10.3233/JND-150106</pub-id><pub-id pub-id-type="pmid">27858750</pub-id></element-citation></ref><ref id="bib54"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Jansen</surname><given-names>M</given-names></name><name><surname>van Alfen</surname><given-names>N</given-names></name><name><surname>Geurts</surname><given-names>ACH</given-names></name><name><surname>de Groot</surname><given-names>IJM</given-names></name></person-group><year iso-8601-date="2013">2013</year><article-title>Assisted bicycle training delays functional deterioration in boys with Duchenne muscular dystrophy: the randomized controlled trial “no use is disuse</article-title><source>Neurorehabilitation and Neural Repair</source><volume>27</volume><fpage>816</fpage><lpage>827</lpage><pub-id pub-id-type="doi">10.1177/1545968313496326</pub-id><pub-id pub-id-type="pmid">23884013</pub-id></element-citation></ref><ref id="bib55"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Kawahara</surname><given-names>G</given-names></name><name><surname>Gasperini</surname><given-names>MJ</given-names></name><name><surname>Myers</surname><given-names>JA</given-names></name><name><surname>Widrick</surname><given-names>JJ</given-names></name><name><surname>Eran</surname><given-names>A</given-names></name><name><surname>Serafini</surname><given-names>PR</given-names></name><name><surname>Alexander</surname><given-names>MS</given-names></name><name><surname>Pletcher</surname><given-names>MT</given-names></name><name><surname>Morris</surname><given-names>CA</given-names></name><name><surname>Kunkel</surname><given-names>LM</given-names></name></person-group><year iso-8601-date="2014">2014</year><article-title>Dystrophic muscle improvement in zebrafish via increased heme oxygenase signaling</article-title><source>Human Molecular Genetics</source><volume>23</volume><fpage>1869</fpage><lpage>1878</lpage><pub-id pub-id-type="doi">10.1093/hmg/ddt579</pub-id><pub-id pub-id-type="pmid">24234649</pub-id></element-citation></ref><ref id="bib56"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Kern</surname><given-names>H</given-names></name><name><surname>Barberi</surname><given-names>L</given-names></name><name><surname>Löfler</surname><given-names>S</given-names></name><name><surname>Sbardella</surname><given-names>S</given-names></name><name><surname>Burggraf</surname><given-names>S</given-names></name><name><surname>Fruhmann</surname><given-names>H</given-names></name><name><surname>Carraro</surname><given-names>U</given-names></name><name><surname>Mosole</surname><given-names>S</given-names></name><name><surname>Sarabon</surname><given-names>N</given-names></name><name><surname>Vogelauer</surname><given-names>M</given-names></name><name><surname>Mayr</surname><given-names>W</given-names></name><name><surname>Krenn</surname><given-names>M</given-names></name><name><surname>Cvecka</surname><given-names>J</given-names></name><name><surname>Romanello</surname><given-names>V</given-names></name><name><surname>Pietrangelo</surname><given-names>L</given-names></name><name><surname>Protasi</surname><given-names>F</given-names></name><name><surname>Sandri</surname><given-names>M</given-names></name><name><surname>Zampieri</surname><given-names>S</given-names></name><name><surname>Musaro</surname><given-names>A</given-names></name></person-group><year iso-8601-date="2014">2014</year><article-title>Electrical Stimulation Counteracts Muscle Decline in Seniors</article-title><source>Frontiers in Aging Neuroscience</source><volume>6</volume><elocation-id>189</elocation-id><pub-id pub-id-type="doi">10.3389/fnagi.2014.00189</pub-id><pub-id pub-id-type="pmid">25104935</pub-id></element-citation></ref><ref id="bib57"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Kilinç</surname><given-names>M</given-names></name><name><surname>Yildirim</surname><given-names>SA</given-names></name><name><surname>Tan</surname><given-names>E</given-names></name></person-group><year iso-8601-date="2015">2015</year><article-title>The effects of electrical stimulation and exercise therapy in patients with limb girdle muscular dystrophy</article-title><source>Neurosciences (Riyadh, Saudi Arabia)</source><volume>20</volume><fpage>259</fpage><lpage>266</lpage><pub-id pub-id-type="doi">10.17712/nsj.2015.3.201501097</pub-id><pub-id pub-id-type="pmid">26166595</pub-id></element-citation></ref><ref id="bib58"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Kobayashi</surname><given-names>YM</given-names></name><name><surname>Rader</surname><given-names>EP</given-names></name><name><surname>Crawford</surname><given-names>RW</given-names></name><name><surname>Campbell</surname><given-names>KP</given-names></name></person-group><year iso-8601-date="2012">2012</year><article-title>Endpoint measures in the mdx mouse relevant for muscular dystrophy pre-clinical studies</article-title><source>Neuromuscular Disorders</source><volume>22</volume><fpage>34</fpage><lpage>42</lpage><pub-id pub-id-type="doi">10.1016/j.nmd.2011.08.001</pub-id><pub-id pub-id-type="pmid">22154712</pub-id></element-citation></ref><ref id="bib59"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Langmead</surname><given-names>B</given-names></name><name><surname>Trapnell</surname><given-names>C</given-names></name><name><surname>Pop</surname><given-names>M</given-names></name><name><surname>Salzberg</surname><given-names>SL</given-names></name></person-group><year iso-8601-date="2009">2009</year><article-title>Ultrafast and memory-efficient alignment of short DNA sequences to the human genome</article-title><source>Genome Biology</source><volume>10</volume><elocation-id>R25</elocation-id><pub-id pub-id-type="doi">10.1186/gb-2009-10-3-r25</pub-id><pub-id pub-id-type="pmid">19261174</pub-id></element-citation></ref><ref id="bib60"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Levy</surname><given-names>DL</given-names></name><name><surname>Heald</surname><given-names>R</given-names></name></person-group><year iso-8601-date="2012">2012</year><article-title>Mechanisms of intracellular scaling</article-title><source>Annual Review of Cell and Developmental Biology</source><volume>28</volume><fpage>113</fpage><lpage>135</lpage><pub-id pub-id-type="doi">10.1146/annurev-cellbio-092910-154158</pub-id><pub-id pub-id-type="pmid">22804576</pub-id></element-citation></ref><ref id="bib61"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Li</surname><given-names>B</given-names></name><name><surname>Dewey</surname><given-names>CN</given-names></name></person-group><year iso-8601-date="2011">2011</year><article-title>RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome</article-title><source>BMC Bioinformatics</source><volume>12</volume><elocation-id>323</elocation-id><pub-id pub-id-type="doi">10.1186/1471-2105-12-323</pub-id><pub-id pub-id-type="pmid">21816040</pub-id></element-citation></ref><ref id="bib62"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Lotri-Koffi</surname><given-names>A</given-names></name><name><surname>Pauly</surname><given-names>M</given-names></name><name><surname>Lemarié</surname><given-names>E</given-names></name><name><surname>Godin-Ribuot</surname><given-names>D</given-names></name><name><surname>Tamisier</surname><given-names>R</given-names></name><name><surname>Pépin</surname><given-names>JL</given-names></name><name><surname>Vivodtzev</surname><given-names>I</given-names></name></person-group><year iso-8601-date="2019">2019</year><article-title>Chronic neuromuscular electrical stimulation improves muscle mass and insulin sensitivity in a mouse model</article-title><source>Scientific Reports</source><volume>9</volume><elocation-id>7252</elocation-id><pub-id pub-id-type="doi">10.1038/s41598-019-43696-4</pub-id><pub-id pub-id-type="pmid">31076597</pub-id></element-citation></ref><ref id="bib63"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Louboutin</surname><given-names>JP</given-names></name><name><surname>Fichter-Gagnepain</surname><given-names>V</given-names></name><name><surname>Thaon</surname><given-names>E</given-names></name><name><surname>Fardeau</surname><given-names>M</given-names></name></person-group><year iso-8601-date="1993">1993</year><article-title>Morphometric analysis of mdx diaphragm muscle fibres</article-title><source>Comparison with Hindlimb Muscles. Neuromuscul Disord</source><volume>1</volume><fpage>463</fpage><lpage>469</lpage><pub-id pub-id-type="doi">10.1016/0960-8966(93)90098-5</pub-id><pub-id pub-id-type="pmid">8186695</pub-id></element-citation></ref><ref id="bib64"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Love</surname><given-names>MI</given-names></name><name><surname>Huber</surname><given-names>W</given-names></name><name><surname>Anders</surname><given-names>S</given-names></name></person-group><year iso-8601-date="2014">2014</year><article-title>Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol15:550</article-title><source>Genome Biology</source><volume>15</volume><elocation-id>550</elocation-id><pub-id pub-id-type="doi">10.1186/s13059-014-0550-8</pub-id><pub-id pub-id-type="pmid">25516281</pub-id></element-citation></ref><ref id="bib65"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Lueders</surname><given-names>TN</given-names></name><name><surname>Zou</surname><given-names>K</given-names></name><name><surname>Huntsman</surname><given-names>HD</given-names></name><name><surname>Meador</surname><given-names>B</given-names></name><name><surname>Mahmassani</surname><given-names>Z</given-names></name><name><surname>Abel</surname><given-names>M</given-names></name><name><surname>Valero</surname><given-names>MC</given-names></name><name><surname>Huey</surname><given-names>KA</given-names></name><name><surname>Boppart</surname><given-names>MD</given-names></name></person-group><year iso-8601-date="2011">2011</year><article-title>The ␣7␤1-integrin accelerates ﬁber hypertrophy and myogenesis following a single bout of eccentric exercise 301:10</article-title><source>American Journal of Physiology. Cell Physiology</source><volume>301</volume><fpage>C938</fpage><lpage>C946</lpage><pub-id pub-id-type="doi">10.1152/ajpcell.00515.2010</pub-id><pub-id pub-id-type="pmid">21753185</pub-id></element-citation></ref><ref id="bib66"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Luthert</surname><given-names>P</given-names></name><name><surname>Vrbová</surname><given-names>G</given-names></name><name><surname>Ward</surname><given-names>KM</given-names></name></person-group><year iso-8601-date="1980">1980</year><article-title>Effects of slow frequency electrical stimulation on muscles of dystrophic mice</article-title><source>Journal of Neurology, Neurosurgery, and Psychiatry</source><volume>43</volume><fpage>803</fpage><lpage>809</lpage><pub-id pub-id-type="doi">10.1136/jnnp.43.9.803</pub-id><pub-id pub-id-type="pmid">6968342</pub-id></element-citation></ref><ref id="bib67"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Maffiuletti</surname><given-names>NA</given-names></name><name><surname>Green</surname><given-names>DA</given-names></name><name><surname>Vaz</surname><given-names>MA</given-names></name><name><surname>Dirks</surname><given-names>ML</given-names></name></person-group><year iso-8601-date="2019">2019</year><article-title>Neuromuscular Electrical Stimulation as a Potential Countermeasure for Skeletal Muscle Atrophy and Weakness During Human Spaceflight</article-title><source>Frontiers in Physiology</source><volume>10</volume><elocation-id>e31</elocation-id><pub-id pub-id-type="doi">10.3389/fphys.2019.01031</pub-id></element-citation></ref><ref id="bib68"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Mahmassani</surname><given-names>ZS</given-names></name><name><surname>Son</surname><given-names>K</given-names></name><name><surname>Pincu</surname><given-names>Y</given-names></name><name><surname>Munroe</surname><given-names>M</given-names></name><name><surname>Drnevich</surname><given-names>J</given-names></name><name><surname>Chen</surname><given-names>J</given-names></name><name><surname>Boppart</surname><given-names>MD</given-names></name></person-group><year iso-8601-date="2017">2017</year><article-title>Integrin regulation of gene transcription in skeletal muscle following an acute bout of eccentric exercise</article-title><source>Integrin Regulation</source><volume>1</volume><elocation-id>e106</elocation-id><pub-id pub-id-type="doi">10.1152/ajpcell.00106.2016</pub-id></element-citation></ref><ref id="bib69"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Margolis</surname><given-names>LM</given-names></name><name><surname>Rivas</surname><given-names>DA</given-names></name></person-group><year iso-8601-date="2015">2015</year><article-title>Implications of Exercise Training and Distribution of Protein Intake on Molecular Processes Regulating Skeletal Muscle Plasticity</article-title><source>Calcified Tissue International</source><volume>96</volume><fpage>211</fpage><lpage>221</lpage><pub-id pub-id-type="doi">10.1007/s00223-014-9921-0</pub-id><pub-id pub-id-type="pmid">25348078</pub-id></element-citation></ref><ref id="bib70"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Markert</surname><given-names>CD</given-names></name><name><surname>Ambrosio</surname><given-names>F</given-names></name><name><surname>Call</surname><given-names>JA</given-names></name><name><surname>Grange</surname><given-names>RW</given-names></name></person-group><year iso-8601-date="2011">2011</year><article-title>Exercise and duchenne muscular dystrophy: Toward evidence-based exercise prescription</article-title><source>Muscle &amp; Nerve</source><volume>43</volume><fpage>464</fpage><lpage>478</lpage><pub-id pub-id-type="doi">10.1002/mus.21987</pub-id><pub-id pub-id-type="pmid">21404285</pub-id></element-citation></ref><ref id="bib71"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Markert</surname><given-names>CD</given-names></name><name><surname>Case</surname><given-names>LE</given-names></name><name><surname>Carter</surname><given-names>GT</given-names></name><name><surname>Furlong</surname><given-names>PA</given-names></name><name><surname>Grange</surname><given-names>RW</given-names></name></person-group><year iso-8601-date="2012">2012</year><article-title>Exercise and duchenne muscular dystrophy: Where we have been and where we need to go: Issues &amp; Opinions: Exercise and DMD Roundtable</article-title><source>Muscle &amp; Nerve</source><volume>45</volume><fpage>746</fpage><lpage>751</lpage><pub-id pub-id-type="doi">10.1002/mus.23244</pub-id><pub-id pub-id-type="pmid">22499105</pub-id></element-citation></ref><ref id="bib72"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Moo</surname><given-names>EK</given-names></name><name><surname>Herzog</surname><given-names>W</given-names></name></person-group><year iso-8601-date="2018">2018</year><article-title>Single sarcomere contraction dynamics in a whole muscle</article-title><source>Scientific Reports</source><volume>8</volume><elocation-id>15235</elocation-id><pub-id pub-id-type="doi">10.1038/s41598-018-33658-7</pub-id><pub-id pub-id-type="pmid">30323321</pub-id></element-citation></ref><ref id="bib73"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Ng</surname><given-names>SY</given-names></name><name><surname>Ljubicic</surname><given-names>V</given-names></name></person-group><year iso-8601-date="2020">2020</year><article-title>Recent insights into neuromuscular junction biology in Duchenne muscular dystrophy: Impacts, challenges, and opportunities</article-title><source>EBioMedicine</source><volume>61</volume><elocation-id>103032</elocation-id><pub-id pub-id-type="doi">10.1016/j.ebiom.2020.103032</pub-id><pub-id pub-id-type="pmid">33039707</pub-id></element-citation></ref><ref id="bib74"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Nishikawa</surname><given-names>Y</given-names></name><name><surname>Takahashi</surname><given-names>T</given-names></name><name><surname>Kawade</surname><given-names>S</given-names></name><name><surname>Maeda</surname><given-names>N</given-names></name><name><surname>Maruyama</surname><given-names>H</given-names></name><name><surname>Hyngstrom</surname><given-names>A</given-names></name></person-group><year iso-8601-date="2021">2021</year><article-title>The Effect of Electrical Muscle Stimulation on Muscle Mass and Balance in Older Adults with Dementia</article-title><source>Brain Sciences</source><volume>11</volume><elocation-id>339</elocation-id><pub-id pub-id-type="doi">10.3390/brainsci11030339</pub-id><pub-id pub-id-type="pmid">33800054</pub-id></element-citation></ref><ref id="bib75"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Ozyilmaz</surname><given-names>B</given-names></name><name><surname>Kirbiyik</surname><given-names>Ö</given-names></name><name><surname>Özdemir</surname><given-names>TR</given-names></name><name><surname>Kaya Özer</surname><given-names>Ö</given-names></name><name><surname>Kutbay</surname><given-names>YB</given-names></name><name><surname>Erdogan</surname><given-names>KM</given-names></name><name><surname>Güvenç</surname><given-names>MS</given-names></name><name><surname>Kale</surname><given-names>MY</given-names></name><name><surname>Gazeteci</surname><given-names>H</given-names></name><name><surname>Kiliç</surname><given-names>B</given-names></name><name><surname>Sertpoyraz</surname><given-names>F</given-names></name><name><surname>Diniz</surname><given-names>G</given-names></name><name><surname>Baydan</surname><given-names>F</given-names></name><name><surname>Gençpinar</surname><given-names>P</given-names></name><name><surname>Dündar</surname><given-names>NO</given-names></name><name><surname>Yiş</surname><given-names>U</given-names></name></person-group><year iso-8601-date="2019">2019</year><article-title>Impact of next-generation sequencing panels in the evaluation of limb-girdle muscular dystrophies</article-title><source>Annals of Human Genetics</source><volume>83</volume><fpage>331</fpage><lpage>347</lpage><pub-id pub-id-type="doi">10.1111/ahg.12319</pub-id><pub-id pub-id-type="pmid">31066050</pub-id></element-citation></ref><ref id="bib76"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Parsons</surname><given-names>MJ</given-names></name><name><surname>Campos</surname><given-names>I</given-names></name><name><surname>Hirst</surname><given-names>EMA</given-names></name><name><surname>Stemple</surname><given-names>DL</given-names></name></person-group><year iso-8601-date="2002">2002</year><article-title>Removal of dystroglycan causes severe muscular dystrophy in zebrafish embryos</article-title><source>Development (Cambridge, England)</source><volume>129</volume><fpage>3505</fpage><lpage>3512</lpage><pub-id pub-id-type="doi">10.1242/dev.129.14.3505</pub-id><pub-id pub-id-type="pmid">12091319</pub-id></element-citation></ref><ref id="bib77"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Pescatori</surname><given-names>M</given-names></name><name><surname>Broccolini</surname><given-names>A</given-names></name><name><surname>Minetti</surname><given-names>C</given-names></name><name><surname>Bertini</surname><given-names>E</given-names></name><name><surname>Bruno</surname><given-names>C</given-names></name><name><surname>D’amico</surname><given-names>A</given-names></name><name><surname>Bernardini</surname><given-names>C</given-names></name><name><surname>Mirabella</surname><given-names>M</given-names></name><name><surname>Silvestri</surname><given-names>G</given-names></name><name><surname>Giglio</surname><given-names>V</given-names></name><name><surname>Modoni</surname><given-names>A</given-names></name><name><surname>Pedemonte</surname><given-names>M</given-names></name><name><surname>Tasca</surname><given-names>G</given-names></name><name><surname>Galluzzi</surname><given-names>G</given-names></name><name><surname>Mercuri</surname><given-names>E</given-names></name><name><surname>Tonali</surname><given-names>PA</given-names></name><name><surname>Ricci</surname><given-names>E</given-names></name></person-group><year iso-8601-date="2007">2007</year><article-title>Gene expression profiling in the early phases of DMD: a constant molecular signature characterizes DMD muscle from early postnatal life throughout disease progression</article-title><source>FASEB Journal</source><volume>21</volume><fpage>1210</fpage><lpage>1226</lpage><pub-id pub-id-type="doi">10.1096/fj.06-7285com</pub-id><pub-id pub-id-type="pmid">17264171</pub-id></element-citation></ref><ref id="bib78"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Pette</surname><given-names>D</given-names></name><name><surname>Vrbová</surname><given-names>G</given-names></name></person-group><year iso-8601-date="1985">1985</year><article-title>Neural control of phenotypic expression in mammalian muscle fibers</article-title><source>Muscle &amp; Nerve</source><volume>8</volume><fpage>676</fpage><lpage>689</lpage><pub-id pub-id-type="doi">10.1002/mus.880080810</pub-id><pub-id pub-id-type="pmid">3903491</pub-id></element-citation></ref><ref id="bib79"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Ramaswamy</surname><given-names>KS</given-names></name><name><surname>Palmer</surname><given-names>ML</given-names></name><name><surname>Meulen</surname><given-names>JH</given-names></name><name><surname>Renoux</surname><given-names>A</given-names></name><name><surname>Kostrominova</surname><given-names>TY</given-names></name><name><surname>Michele</surname><given-names>DE</given-names></name><name><surname>Faulkner</surname><given-names>JA</given-names></name></person-group><year iso-8601-date="2011">2011</year><article-title>Lateral transmission of force is impaired in skeletal muscles of dystrophic mice and very old rats</article-title><source>J Physiol</source><volume>589</volume><fpage>1195</fpage><lpage>1208</lpage><pub-id pub-id-type="doi">10.1113/jphysiol.2010.201921</pub-id></element-citation></ref><ref id="bib80"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Reichmann</surname><given-names>H</given-names></name><name><surname>Pette</surname><given-names>D</given-names></name><name><surname>Vrbová</surname><given-names>G</given-names></name></person-group><year iso-8601-date="1981">1981</year><article-title>Effects of low frequency electrical stimulation on enzyme and isozyme patterns of dystrophic mouse muscle</article-title><source>FEBS Letters</source><volume>128</volume><fpage>55</fpage><lpage>58</lpage><pub-id pub-id-type="doi">10.1016/0014-5793(81)81078-2</pub-id><pub-id pub-id-type="pmid">7023982</pub-id></element-citation></ref><ref id="bib81"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Roman</surname><given-names>W</given-names></name><name><surname>Gomes</surname><given-names>ER</given-names></name></person-group><year iso-8601-date="2018">2018</year><article-title>Nuclear positioning in skeletal muscle</article-title><source>Cell &amp; Developmental Biology</source><volume>82</volume><fpage>51</fpage><lpage>56</lpage><pub-id pub-id-type="doi">10.1016/j.semcdb.2017.11.005</pub-id><pub-id pub-id-type="pmid">29241690</pub-id></element-citation></ref><ref id="bib82"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Ruegg</surname><given-names>UT</given-names></name><name><surname>Nicolas-Métral</surname><given-names>V</given-names></name><name><surname>Challet</surname><given-names>C</given-names></name><name><surname>Bernard-Hélary</surname><given-names>K</given-names></name><name><surname>Dorchies</surname><given-names>OM</given-names></name><name><surname>Wagner</surname><given-names>S</given-names></name><name><surname>Buetler</surname><given-names>TM</given-names></name></person-group><year iso-8601-date="2002">2002</year><article-title>Pharmacological control of cellular calcium handling in dystrophic skeletal muscle</article-title><source>Neuromuscular Disorders</source><volume>12 Suppl 1</volume><fpage>S155</fpage><lpage>S161</lpage><pub-id pub-id-type="doi">10.1016/s0960-8966(02)00095-0</pub-id><pub-id pub-id-type="pmid">12206810</pub-id></element-citation></ref><ref id="bib83"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Saint-Amant</surname><given-names>L</given-names></name><name><surname>Drapeau</surname><given-names>P</given-names></name></person-group><year iso-8601-date="1998">1998</year><article-title>Time course of the development of motor behaviors in the zebrafish embryo</article-title><source>Journal of Neurobiology</source><volume>37</volume><fpage>622</fpage><lpage>632</lpage><pub-id pub-id-type="doi">10.1002/(sici)1097-4695(199812)37:4&lt;622::aid-neu10&gt;3.0.co;2-s</pub-id><pub-id pub-id-type="pmid">9858263</pub-id></element-citation></ref><ref id="bib84"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Scott</surname><given-names>OM</given-names></name><name><surname>Hyde</surname><given-names>SA</given-names></name><name><surname>Goddard</surname><given-names>C</given-names></name><name><surname>Jones</surname><given-names>R</given-names></name><name><surname>Dubowitz</surname><given-names>V</given-names></name></person-group><year iso-8601-date="1981">1981</year><article-title>Effect of exercise in Duchenne muscular dystrophy</article-title><source>Physiotherapy</source><volume>67</volume><fpage>174</fpage><lpage>176</lpage><pub-id pub-id-type="pmid">7029578</pub-id></element-citation></ref><ref id="bib85"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Scott</surname><given-names>OM</given-names></name><name><surname>Vrbová</surname><given-names>G</given-names></name><name><surname>Hyde</surname><given-names>SA</given-names></name><name><surname>Dubowitz</surname><given-names>V</given-names></name></person-group><year iso-8601-date="1986">1986</year><article-title>Responses of muscles of patients with Duchenne muscular dystrophy to chronic electrical stimulation</article-title><source>Journal of Neurology, Neurosurgery, and Psychiatry</source><volume>49</volume><fpage>1427</fpage><lpage>1434</lpage><pub-id pub-id-type="doi">10.1136/jnnp.49.12.1427</pub-id><pub-id pub-id-type="pmid">3492592</pub-id></element-citation></ref><ref id="bib86"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Scott</surname><given-names>OM</given-names></name><name><surname>Hyde</surname><given-names>SA</given-names></name><name><surname>Vrbová</surname><given-names>G</given-names></name><name><surname>Dubowitz</surname><given-names>V</given-names></name></person-group><year iso-8601-date="1990">1990</year><article-title>Therapeutic possibilities of chronic low frequency electrical stimulation in children with Duchenne muscular dystrophy</article-title><source>Journal of the Neurological Sciences</source><volume>95</volume><fpage>171</fpage><lpage>182</lpage><pub-id pub-id-type="doi">10.1016/0022-510x(90)90240-n</pub-id><pub-id pub-id-type="pmid">2324768</pub-id></element-citation></ref><ref id="bib87"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Sheffler</surname><given-names>LR</given-names></name><name><surname>Chae</surname><given-names>J</given-names></name></person-group><year iso-8601-date="2007">2007</year><article-title>Neuromuscular electrical stimulation in neurorehabilitation</article-title><source>Muscle &amp; Nerve</source><volume>35</volume><fpage>562</fpage><lpage>590</lpage><pub-id pub-id-type="doi">10.1002/mus.20758</pub-id><pub-id pub-id-type="pmid">17299744</pub-id></element-citation></ref><ref id="bib88"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Silva</surname><given-names>PE</given-names></name><name><surname>de Cássia Marqueti</surname><given-names>R</given-names></name><name><surname>Livino-de-Carvalho</surname><given-names>K</given-names></name><name><surname>de Araujo</surname><given-names>AET</given-names></name><name><surname>Castro</surname><given-names>J</given-names></name><name><surname>da Silva</surname><given-names>VM</given-names></name><name><surname>Vieira</surname><given-names>L</given-names></name><name><surname>Souza</surname><given-names>VC</given-names></name><name><surname>Dantas</surname><given-names>LO</given-names></name><name><surname>Cipriano</surname><given-names>G</given-names></name><name><surname>Nóbrega</surname><given-names>OT</given-names></name><name><surname>Babault</surname><given-names>N</given-names></name><name><surname>Durigan</surname><given-names>JLQ</given-names></name></person-group><year iso-8601-date="2019">2019</year><article-title>Neuromuscular electrical stimulation in critically ill traumatic brain injury patients attenuates muscle atrophy, neurophysiological disorders, and weakness: a randomized controlled trial</article-title><source>Journal of Intensive Care</source><volume>7</volume><elocation-id>59</elocation-id><pub-id pub-id-type="doi">10.1186/s40560-019-0417-x</pub-id><pub-id pub-id-type="pmid">31890221</pub-id></element-citation></ref><ref id="bib89"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Smith</surname><given-names>SJ</given-names></name><name><surname>Horstick</surname><given-names>EJ</given-names></name><name><surname>Davidson</surname><given-names>AE</given-names></name><name><surname>Dowling</surname><given-names>J</given-names></name></person-group><year iso-8601-date="2015">2015</year><article-title>Analysis of Zebrafish Larvae Skeletal Muscle Integrity with Evans Blue Dye</article-title><source>Journal of Visualized Experiments</source><volume>1</volume><pub-id pub-id-type="doi">10.3791/53183</pub-id><pub-id pub-id-type="pmid">26649573</pub-id></element-citation></ref><ref id="bib90"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Subramanian</surname><given-names>A</given-names></name><name><surname>Schilling</surname><given-names>TF</given-names></name></person-group><year iso-8601-date="2014">2014</year><article-title>Thrombospondin-4 controls matrix assembly during development and repair of myotendinous junctions</article-title><source>eLife</source><volume>1</volume><elocation-id>e3</elocation-id><pub-id pub-id-type="doi">10.7554/eLife.02372</pub-id></element-citation></ref><ref id="bib91"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Vignos</surname><given-names>PJ</given-names></name><name><surname>Watkins</surname><given-names>MP</given-names></name></person-group><year iso-8601-date="1966">1966</year><article-title>The Effect of Exercise in Muscular Dystrophy 6</article-title><source>JAMA</source><volume>197</volume><fpage>843</fpage><lpage>848</lpage><pub-id pub-id-type="doi">10.1001/jama.1966.03110110067015</pub-id><pub-id pub-id-type="pmid">5952771</pub-id></element-citation></ref><ref id="bib92"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Voet</surname><given-names>NBM</given-names></name><name><surname>van der Kooi</surname><given-names>EL</given-names></name><name><surname>Riphagen</surname><given-names>II</given-names></name><name><surname>Lindeman</surname><given-names>E</given-names></name><name><surname>van Engelen</surname><given-names>BGM</given-names></name><name><surname>Geurts</surname><given-names>ACH</given-names></name></person-group><year iso-8601-date="2013">2013</year><article-title>Strength training and aerobic exercise training for muscle disease</article-title><source>The Cochrane Database of Systematic Reviews</source><volume>1</volume><elocation-id>CD003907</elocation-id><pub-id pub-id-type="doi">10.1002/14651858.CD003907.pub4</pub-id><pub-id pub-id-type="pmid">23835682</pub-id></element-citation></ref><ref id="bib93"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Vrbová</surname><given-names>G</given-names></name><name><surname>Ward</surname><given-names>K</given-names></name></person-group><year iso-8601-date="1981">1981</year><article-title>Observations on the effects of low frequency electrical stimulation on fast muscles of dystrophic mice</article-title><source>Journal of Neurology, Neurosurgery, and Psychiatry</source><volume>44</volume><fpage>1002</fpage><lpage>1006</lpage><pub-id pub-id-type="doi">10.1136/jnnp.44.11.1002</pub-id><pub-id pub-id-type="pmid">6977620</pub-id></element-citation></ref><ref id="bib94"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Wahls</surname><given-names>TL</given-names></name><name><surname>Reese</surname><given-names>D</given-names></name><name><surname>Kaplan</surname><given-names>D</given-names></name><name><surname>Darling</surname><given-names>WG</given-names></name></person-group><year iso-8601-date="2010">2010</year><article-title>Rehabilitation with neuromuscular electrical stimulation leads to functional gains in ambulation in patients with secondary progressive and primary progressive multiple sclerosis: a case series report</article-title><source>Journal of Alternative and Complementary Medicine (New York, N.Y.)</source><volume>16</volume><fpage>1343</fpage><lpage>1349</lpage><pub-id pub-id-type="doi">10.1089/acm.2010.0080</pub-id><pub-id pub-id-type="pmid">21138391</pub-id></element-citation></ref><ref id="bib95"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Widrick</surname><given-names>JJ</given-names></name><name><surname>Alexander</surname><given-names>MS</given-names></name><name><surname>Sanchez</surname><given-names>B</given-names></name><name><surname>Gibbs</surname><given-names>DE</given-names></name><name><surname>Kawahara</surname><given-names>G</given-names></name><name><surname>Beggs</surname><given-names>AH</given-names></name><name><surname>Kunkel</surname><given-names>LM</given-names></name></person-group><year iso-8601-date="2016">2016</year><article-title>Muscle dysfunction in a zebrafish model of Duchenne muscular dystrophy</article-title><source>Physiological Genomics</source><volume>48</volume><fpage>850</fpage><lpage>860</lpage><pub-id pub-id-type="doi">10.1152/physiolgenomics.00088.2016</pub-id><pub-id pub-id-type="pmid">27764767</pub-id></element-citation></ref><ref id="bib96"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Windner</surname><given-names>SE</given-names></name><name><surname>Manhart</surname><given-names>A</given-names></name><name><surname>Brown</surname><given-names>A</given-names></name><name><surname>Mogilner</surname><given-names>A</given-names></name><name><surname>Baylies</surname><given-names>MK</given-names></name></person-group><year iso-8601-date="2019">2019</year><article-title>Nuclear Scaling Is Coordinated among Individual Nuclei in Multinucleated Muscle Fibers</article-title><source>Developmental Cell</source><volume>49</volume><fpage>48</fpage><lpage>62</lpage><pub-id pub-id-type="doi">10.1016/j.devcel.2019.02.020</pub-id><pub-id pub-id-type="pmid">30905770</pub-id></element-citation></ref><ref id="bib97"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Zelikovich</surname><given-names>AS</given-names></name><name><surname>Quattrocelli</surname><given-names>M</given-names></name><name><surname>Salamone</surname><given-names>IM</given-names></name><name><surname>Kuntz</surname><given-names>NL</given-names></name><name><surname>McNally</surname><given-names>EM</given-names></name></person-group><year iso-8601-date="2019">2019</year><article-title>Moderate exercise improves function and increases adiponectin in the mdx mouse model of muscular dystrophy</article-title><source>Scientific Reports</source><volume>9</volume><elocation-id>5770</elocation-id><pub-id pub-id-type="doi">10.1038/s41598-019-42203-z</pub-id><pub-id pub-id-type="pmid">30962487</pub-id></element-citation></ref><ref id="bib98"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Zou</surname><given-names>K</given-names></name><name><surname>Meador</surname><given-names>BM</given-names></name><name><surname>Johnson</surname><given-names>B</given-names></name><name><surname>Huntsman</surname><given-names>HD</given-names></name><name><surname>Mahmassani</surname><given-names>Z</given-names></name><name><surname>Valero</surname><given-names>MC</given-names></name><name><surname>Huey</surname><given-names>KA</given-names></name><name><surname>Boppart</surname><given-names>MD</given-names></name></person-group><year iso-8601-date="2011">2011</year><article-title>The ␣7␤1-integrin increases muscle hypertrophy following multiple bouts of eccentric exercise</article-title><source>Journal of Applied Physiology (Bethesda, Md</source><volume>111</volume><fpage>1134</fpage><lpage>1141</lpage><pub-id pub-id-type="doi">10.1152/japplphysiol.00081.2011</pub-id><pub-id pub-id-type="pmid">21817112</pub-id></element-citation></ref><ref id="bib99"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Zupan</surname><given-names>A</given-names></name></person-group><year iso-8601-date="1992">1992</year><article-title>Long-term electrical stimulation of muscles in children with Duchenne and Becker muscular dystrophy</article-title><source>Muscle &amp; Nerve</source><volume>15</volume><fpage>362</fpage><lpage>367</lpage><pub-id pub-id-type="doi">10.1002/mus.880150316</pub-id><pub-id pub-id-type="pmid">1557085</pub-id></element-citation></ref><ref id="bib100"><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Zupan</surname><given-names>A</given-names></name><name><surname>Gregoric</surname><given-names>M</given-names></name><name><surname>Valencic</surname><given-names>V</given-names></name><name><surname>Vandot</surname><given-names>S</given-names></name></person-group><year iso-8601-date="1993">1993</year><article-title>Effects of Electrical Stimulation on Muscles of Children with Duchenne and Becker Muscular Dystrophy</article-title><source>Neuropediatrics</source><volume>24</volume><fpage>189</fpage><lpage>192</lpage><pub-id pub-id-type="doi">10.1055/s-2008-1071537</pub-id><pub-id pub-id-type="pmid">8232775</pub-id></element-citation></ref></ref-list></back><sub-article article-type="editor-report" id="sa0"><front-stub><article-id pub-id-type="doi">10.7554/eLife.62760.sa0</article-id><title-group><article-title>Editor's evaluation</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Dowling</surname><given-names>James J</given-names></name><role specific-use="editor">Reviewing Editor</role><aff><institution-wrap><institution-id institution-id-type="ror">https://ror.org/04374qe70</institution-id><institution>The Hospital for Sick Children</institution></institution-wrap><country>Canada</country></aff></contrib></contrib-group></front-stub><body><p>This is an interesting and well-conceived study that explores the potential benefit of electrical stimulation for muscular dystrophy in terms of muscle structure and motor function. The authors take advantage of the zebrafish model system, and a well-characterized zebrafish mutant that models Duchenne muscular dystrophy, to show that certain stimulation paradigms can improve muscle morphology and muscle performance, like via integrin-mediated pathway(s). The potential implications of this research are broad as they begin to address the key question in the MD field about whether and what types of exercise may (or may not) be beneficial to dystrophic muscle.</p></body></sub-article><sub-article article-type="decision-letter" id="sa1"><front-stub><article-id pub-id-type="doi">10.7554/eLife.62760.sa1</article-id><title-group><article-title>Decision letter</article-title></title-group><contrib-group content-type="section"><contrib contrib-type="editor"><name><surname>Dowling</surname><given-names>James J</given-names></name><role>Reviewing Editor</role><aff><institution-wrap><institution-id institution-id-type="ror">https://ror.org/04374qe70</institution-id><institution>The Hospital for Sick Children</institution></institution-wrap><country>Canada</country></aff></contrib></contrib-group></front-stub><body><boxed-text id="box1"><p>In the interests of transparency, eLife publishes the most substantive revision requests and the accompanying author responses.</p></boxed-text><p><bold>Decision letter after peer review:</bold></p><p>Thank you for submitting your article &quot;Inactivity is deleterious and neuromuscular stimulation is beneficial in an animal model of Duchenne Muscular Dystrophy&quot; for consideration by <italic>eLife</italic>. Your article has been reviewed by 3 peer reviewers, and the evaluation has been overseen by a Reviewing Editor and Didier Stainier as the Senior Editor. The reviewers have opted to remain anonymous.</p><p>The reviewers have discussed the reviews with one another and the Reviewing Editor has drafted this decision to help you prepare a revised submission.</p><p>Summary:</p><p>The authors seek to tackle the question of exercise and inactivity in Duchenne muscular dystrophy, an important and unsolved issue. They use the zebrafish model system and two paradigms, one an inactivity paradigm (using tricaine) and the other an exercise paradigm using NMES. They find that inactivity worsens the dystrophic phenotype, and that different exercise paradigms impact the dystrophic phenotype differently. Overall this is an important study with exciting data and a potential to impact our understanding of exercise in DMD. However, as described below, all reviewers felt that several critical experimental considerations are necessary to consider in order to substantiate the data claims.</p><p>Essential Revisions:</p><p>1. The inactivity paradigm (e.g. figure 2) using tricaine as a means of inducing inactivity has pluses and minuses. There are issues with comparing it to rodent and human inactivity experiments (which usually involve hindlimb/limb immobilization), as the authors here are using chemical inhibition. Tricaine has systemic effects on multiple tissue types and organ systems including neurological and respiratory systems. I would be careful to call this model an inactivity model. Other appropriate models of inactivity exist, including physically restraining the zebrafish larvae to prevent movement and use of chemicals like BTS. In sum, the authors need to rule out if the consequences of tricaine administration is due to inactivity or pulmonary/secondary dystrophic pathology issues (e.g. swim bladder or respiration), and also consider a second &quot;inactivity&quot; paradigm in order to validate that the findings are due to inactivity.</p><p>2. NMJ changes are hypothesized as an explanation for the response to NMES paradigms. Can/have the authors evaluated the functional output of the NMJ in the NMES-treated DMD zebrafish? Were any electrophysiological measurements performed on the NMES treated DMD fish, independent of any therapeutic experimental protocol?</p><p>3. Hmox1 overexpression has been pursued as a strategy for DMD in mice by the Zoltan Arany and Joseph Dulak's groups, so the findings in figure 10 are supported. Have the authors evaluated whether or not the entire Hmox1 pathway was affected in the NMES-treated DMD fish?</p><p>4. For data presented in figure 1: authors describe the birefringence phenotype in mild mutants as increased degeneration for three days and then increased regeneration. Could they provide any experimental evidence of &quot;muscle regeneration&quot; mentioned in this statement?. Similarly, they mention severe dmd mutant regenerated throughout this study, however, no experimental data is provided to support this statement. As myotome contains both normal and degenerating myofibers, could improvement in birefringence be a consequence of the growth of those normal myofibers vs regeneration of sick myofibers? The term regeneration has also been used later in NEMS studies and needs to be supplemented with the experimental evidence of regeneration. In sum, there needs to be experimental support for the supposition of regeneration throughout the manuscript, as well as more careful consideration of rates of degeneration and regeneration.</p><p>5. There were several concerns with the transcriptomic data. More information related to the comparison of WT vs untreated sap is necessary for the interpretation of the changes seen with NMES. Also, the authors see very few consistent changes in terms of genes regulated one way in untreated sap and the other with treatment. It appears in fact that an overarching conclusion is that the transcriptional changes are NOT a driving force of the response to NMES. There is concern about the interpretability of taking one or two changed genes, as most transcriptional programs do not function in this isolated manner. For example, what is the true meaning of a change in b1 integrin without any changes in a integrin levels. In other words, how is this finding really of biological significance? In addition, the authors propose ECM changes as a potential mechanism. This should be supported by evaluation of ECM proteins (by western or immunostaining for example).</p><p>6. The authors clearly demonstrate that the phenotype is variable. However, they do not carry this variability forward to all of their inactivity and exercise studies. Several of those studies feature relatively low n numbers. How have the authors ensured that the differences seen are not, in fact, due to the natural variability of the dmd phenotype in zebrafish? In particular, this seems like it would be an issue for all studies with n sizes less than 20, particularly given that the magnitude of difference for many of the studies is small.</p><p>7. DMD is caused by damage in sarcolemma and subsequent myofiber detachment. The authors didn't observe any effect on myofiber structure but still found reduced velocity in mutants that were subjected to intermittent inactivity. Could this be due to a slight increase in sarcolemma damage (not examined here) and/or changes in the calcium in muscle fibers? Similarly, what are the effects of extended inactivity on MTJ structure? While authors make good observations with their animal model (as also seen in human and other animal models previously), mechanistic details underlying these changes are lacking.</p><p>[Editors’ note: further revisions were suggested prior to acceptance, as described below.]</p><p>Thank you for resubmitting your work entitled &quot;Beneficial impacts of neuromuscular electrical stimulation on muscle structure and function in the zebrafish model of Duchenne Muscular Dystrophy&quot; for further consideration by <italic>eLife</italic>. Your revised article has been evaluated by Didier Stainier (Senior Editor) and a Reviewing Editor.</p><p>The manuscript has been improved but there are some remaining issues that need to be addressed, as outlined below:</p><p>There are three major areas of concern related to the resubmitted manuscript.</p><p>(1) The authors fail to truly contextualize their findings with the abundant literature related to neuromuscular electrical stimulation in neuromuscular disease. This needs to be incorporated into the Discussion section in order to best interpret the current study within the field. Please see the comments from reviewer 1 below.</p><p>(2) The authors suggest that NMES may be working through modification of ECM-cell adhesion. They present data showing failure of itga7 mutants to respond to NMES. While this provides evidence that itga7 is potentially involved in mediated response in WT fish, it does not inform on the situation with dmd. The ideal experiment would of course be to test NMES in the setting of itag7/dmd double knockouts. At the very least, the fact that this link is not firmly established in the dmd model needs to be pointed out.</p><p>(3) The authors also implicate TGFb signalling based on RNAseq data. The authors rightly point out the short comings of RNAseq for uncovering the important pathways; this is particularly true for TGFb signalling, which is very much regulated and governed at the level of post translational changes. There are simple assays for examining TGFb signalling and activity that have been utilized in other DMD models (such as mdx) and in zebrafish. Such assays would lend support to the RNAseq data, which on its own its relatively weak proof of the involvement of the ECM and TGFb.</p><p>Additional specific reviewer comments can be found below.</p><p><italic>Reviewer #1:</italic></p><p>I appreciate the authors for taking several of my considerations and concerns in the newly incorporated revised manuscript. In particular the BTS study showing that this model of inactivity did not significantly alter the DMD zebrafish phenotype.</p><p>That being said, I appreciate the authors candor and understand the challenges both technical and personnel during the pandemic. I do believe that the revised manuscript does support the authors' reframed hypothesis(es) and I have no objections to the rest of the experiments.</p><p><italic>Reviewer #3:</italic></p><p>This study by Kilroy et al., is a revised version of the previously submitted manuscript. Authors have added more details to support their findings, however, mechanistic model still requires more studies to demonstrate a clear mechanism of NMES effect on skeletal muscle.</p><p>1. Does NMES result in formation of new myofibers or improves the attachment of existing myofibers? Are similar gene/pathways responsible for both?</p><p>2. Did authors look at the swimming behavior of fish during earlier time points (after NMES). Could a reduction in muscle degeneration could be due to low activity of fish during earlier time points following NMES treatment?</p><p>3. Figure 7D: Could differences observed in control dmd mutant and NMES treated mutant be due to variability in the initial damage (multiple somites in the control Vs isolated somites in NMES treated). As dmd phenotype is variable, have authors compared regeneration with other control dmd fish where muscle damage is not this profound?</p><p>4. Does hmox1a transcript expression correlate with the protein expression? Similarly, were changes were observed at the protein level for ECM genes identified by RNA-seq?</p><p>5. Failure of muscle improvement by eNMES in ITGA7 mutants may not mean that improvement in muscle structure in dmd mutant is through ITGA7. DMD mutant control muscle do have some expression of ITGA7 (Fontelonga et al., 2019 HMG) unlike ITGA7 null fish and therefore, failure of ITGA7 null fish to show improvement in NMES assay could be independent of DMD.</p></body></sub-article><sub-article article-type="reply" id="sa2"><front-stub><article-id pub-id-type="doi">10.7554/eLife.62760.sa2</article-id><title-group><article-title>Author response</article-title></title-group></front-stub><body><disp-quote content-type="editor-comment"><p>Essential revisions:</p><p>1. The inactivity paradigm (e.g. figure 2) using tricaine as a means of inducing inactivity has pluses and minuses. There are issues with comparing it to rodent and human inactivity experiments (which usually involve hindlimb/limb immobilization), as the authors here are using chemical inhibition. Tricaine has systemic effects on multiple tissue types and organ systems including neurological and respiratory systems. I would be careful to call this model an inactivity model. Other appropriate models of inactivity exist, including physically restraining the zebrafish larvae to prevent movement and use of chemicals like BTS. In sum, the authors need to rule out if the consequences of tricaine administration is due to inactivity or pulmonary/secondary dystrophic pathology issues (e.g. swim bladder or respiration), and also consider a second &quot;inactivity&quot; paradigm in order to validate that the findings are due to inactivity.</p></disp-quote><p>We thank the reviewers for this critique because they are correct, tricaine does act on neural voltage-gated sodium channels in zebrafish. Indeed, the fact that tricaine does not paralyze muscle is advantageous to us given that we immobilize larvae in tricaine during electrostimulation. We were less concerned about pulmonary / swim bladder issues given that inactivity was applied at fairly young stages where circulation is not necessary for viability – but it is true that we did not rule this out.</p><p>The reviewers were prescient by highlighting that our data would be improved by incorporating an additional model of inactivity. We used the reviewers suggestion of BTS as an additional inactivity model and found that BTS does not exacerbate the DMD phenotype on its own. This result made us very grateful to the reviewers for their suggestion because we clearly need to delve further into why tricaine exacerbates the phenotype but BTS does not. For the purposes of clarity and focus, we have removed all inactivity data from this manuscript.</p><disp-quote content-type="editor-comment"><p>2. NMJ changes are hypothesized as an explanation for the response to NMES paradigms. Can/have the authors evaluated the functional output of the NMJ in the NMES-treated DMD zebrafish? Were any electrophysiological measurements performed on the NMES treated DMD fish, independent of any therapeutic experimental protocol?</p></disp-quote><p>We completely agree with the reviewers and would love to be able to conduct electrophysiology on zebrafish larvae. Unfortunately, this is an exceedingly difficult technique that is only done by a few labs and requires specialized equipment that we do not have access to (for reference, a pubmed search for zebrafish electrophysiology returned 240 papers – only 19 of which were neuromuscular recordings -the rest cardiac/brain/eye recordings). We were initially excited upon discovering a manuscript describing a set-up for undergraduate research labs (thinking that maybe we could do that), but this system only records the overall field potential of the startle response – which then opens up a host of confounding factors such as sensory physiology.</p><p>The reviewers are correct that this would be an excellent future direction – but this is likely one that would require a sabbatical because of the difficulty of this technique. We hope that the reviewers understand these constraints.</p><disp-quote content-type="editor-comment"><p>3. Hmox1 overexpression has been pursued as a strategy for DMD in mice by the Zoltan Arany and Joseph Dulak's groups, so the findings in figure 10 are supported. Have the authors evaluated whether or not the entire Hmox1 pathway was affected in the NMES-treated DMD fish?</p></disp-quote><p>The reviewers are correct in that Heme Oxygenase signaling has been identified as a potential strategy for DMD. We analyzed multiple members of the Hmox1 pathway and they were not differentially expressed and have included this analysis as a supplemental figure. We did however identify that HO is required for eNMES-mediated improvement (see response to comment #5).</p><disp-quote content-type="editor-comment"><p>4. For data presented in figure 1: authors describe the birefringence phenotype in mild mutants as increased degeneration for three days and then increased regeneration. Could they provide any experimental evidence of &quot;muscle regeneration&quot; mentioned in this statement?. Similarly, they mention severe dmd mutant regenerated throughout this study, however, no experimental data is provided to support this statement. As myotome contains both normal and degenerating myofibers, could improvement in birefringence be a consequence of the growth of those normal myofibers vs regeneration of sick myofibers? The term regeneration has also been used later in NEMS studies and needs to be supplemented with the experimental evidence of regeneration. In sum, there needs to be experimental support for the supposition of regeneration throughout the manuscript, as well as more careful consideration of rates of degeneration and regeneration.</p></disp-quote><p>We agree with the reviewers that we did not assess regeneration versus hypertrophy. We have removed these statements entirely and/or hedged by saying phases such as “improvement in muscle driven by regeneration and/or hypertrophy”.</p><disp-quote content-type="editor-comment"><p>5. There were several concerns with the transcriptomic data. More information related to the comparison of WT vs untreated sap is necessary for the interpretation of the changes seen with NMES. Also, the authors see very few consistent changes in terms of genes regulated one way in untreated sap and the other with treatment. It appears in fact that an overarching conclusion is that the transcriptional changes are NOT a driving force of the response to NMES. There is concern about the interpretability of taking one or two changed genes, as most transcriptional programs do not function in this isolated manner. For example, what is the true meaning of a change in b1 integrin without any changes in a integrin levels. In other words, how is this finding really of biological significance? In addition, the authors propose ECM changes as a potential mechanism. This should be supported by evaluation of ECM proteins (by western or immunostaining for example).</p></disp-quote><p>The reviewers are correct, and unfortunately GO analysis of the transcriptomic data was not particularly informative (as the reviewers surmised). In retrospect we likely should have conducted the transcriptomics experiments within a few hours of NMES rather than two days later. We did evaluate ECM proteins and unfortunately, at least in our hands, ECM staining of 7dpf DMD larvae is either extremely variable, or ECM distribution is extremely variable. Thus, we were unable to distinguish changes with eNMES because the baseline staining had so much variability.</p><p>Because of the limitations of the transcriptomic data, we now essentially gloss over the data as really only setting up two potential mechanisms that now test further in this revised manuscript: Cell adhesion and HO signaling.</p><disp-quote content-type="editor-comment"><p>6. The authors clearly demonstrate that the phenotype is variable. However, they do not carry this variability forward to all of their inactivity and exercise studies. Several of those studies feature relatively low n numbers. How have the authors ensured that the differences seen are not, in fact, due to the natural variability of the dmd phenotype in zebrafish? In particular, this seems like it would be an issue for all studies with n sizes less than 20, particularly given that the magnitude of difference for many of the studies is small.</p></disp-quote><p>We apologize for not being clear. We actually believe that the reviewers are correct – that the differences seen are due to the natural variability of the dmd phenotype, which we tried to define mathematically based on birefringence at 2 days post fertilization. We agree that the mild versus severe phenotype description distracts from the main narrative. Thus, we have removed that from this manuscript. In the future we hope to discern whether these phenotypes are transcriptionally distinct, use live imaging to determine rates of degeneration and regeneration and/or hypertrophy. Those experiments are outside the scope of this manuscript and will be the subject of future studies.</p><disp-quote content-type="editor-comment"><p>7. DMD is caused by damage in sarcolemma and subsequent myofiber detachment. The authors didn't observe any effect on myofiber structure but still found reduced velocity in mutants that were subjected to intermittent inactivity. Could this be due to a slight increase in sarcolemma damage (not examined here) and/or changes in the calcium in muscle fibers? Similarly, what are the effects of extended inactivity on MTJ structure? While authors make good observations with their animal model (as also seen in human and other animal models previously), mechanistic details underlying these changes are lacking.</p></disp-quote><p>We were unable to observe slight changes in membrane damage that would explain the change in swimming. One aspect of this manuscript that is interesting yet quite frustrating is that we rarely observe strict correlations between muscle structure, NMJ structure, swimming, and survival. We do not know why these data are so confusing, but we suspect that we will need to develop more sophisticated assays to get at underlying mechanisms in the future.</p><p>[Editors’ note: further revisions were suggested prior to acceptance, as described below.]</p><disp-quote content-type="editor-comment"><p>The manuscript has been improved but there are some remaining issues that need to be addressed, as outlined below:</p><p>There are three major areas of concern related to the resubmitted manuscript.</p><p>(1) The authors fail to truly contextualize their findings with the abundant literature related to neuromuscular electrical stimulation in neuromuscular disease. This needs to be incorporated into the Discussion section in order to best interpret the current study within the field. Please see the comments from reviewer 1 below.</p></disp-quote><p>We have added much more context for NMES and disease. We hope that the reviewers appreciate our approach to broadening the discussion. The added text :</p><p>“Electrical stimulation has been shown to be generally safe and potentially effective for some conditions. For example, there are potential therapeutic benefits of NMES for treatment of spinal cord injuries. Although not all trials observe an increase in voluntary muscle strength with NMES, none found deleterious effects of NMES (de Freitas et al., 2018). NMES can also improve dysphagia after stroke: ten out of 11 trials showed that NMES improved swallowing with only one showing no effect (Alamer et al., 2020). NMES combats disuse atrophy in multiple contexts. Chronic NMES applied to mice who were anesthetized for 2.5 weeks not only showed increased muscle mass in the stimulated limb, but also had improved insulin sensitivity (Lotri-Koffi et al., 2019). NMES for at least seven days is sufficient to improve muscle mass of lower limbs in non-ambulatory patients with traumatic brain injury (Silva et al., 2019). NMES is even being studied as a means to combat muscle atrophy during spaceflight (Maffiuletti et al., 2019). The above data show that NMES has potential benefits for sudden muscle disuse caused by external events, but the molecular and cellular mechanisms are not well understood.</p><p>NMES also shows promise for neurodegenerative disorders and aging muscle. Muscle mass and strength are improved in aged rats with NMES and NMES improves muscle mass and balance in older adults as well as older adults with dementia (Dow et al., 2005; Kern et al., 2014; Nishikawa et al., 2021). NMES improves mobility in patients with progressive multiple sclerosis (Wahls et al., 2010). NMES may also improve mobility and strength in ALS (Handa et al., 1995), although intensity may be important (The ALSUntangled Group, 2017). Far less is known about NMES in the context of muscular dystrophies. The concept of super-imposing electrical stimulation to improve dystrophic muscle was proposed by the neurologist who first described DMD over a hundred years ago (Duchenne, GB, 1870). Despite the longevity of this hypothesis, it has not been sufficiently tested as a therapy for DMD. There are promising data: NMES improves muscle fiber morphology in dystrophic mice (Dangain and Vrbova, 1989; Luthert et al., 1980; Vrbová and Ward, 1981) and chickens (Barnard et al., 1986). In chickens the benefit was most pronounced if administered prior to rampant muscle degeneration (Barnard et al., 1986). Small trials in young children also suggest that early low frequency NMES can improve voluntary muscle contraction compared with the contralateral leg (Scott et al., 1990, 1986). NMES can also improve muscle function in myotonic dystrophy (Chisari et al., 2013) and limb girdle muscular dystrophy (Kılınç et al., 2015). Despite these promising studies, NMES is not commonly used as an adjuvant therapy in myopathies and dystrophies. This is potentially due to the impractical approach of chronic NMES for most if not all skeletal muscles. Thus, it is important to elucidate underlying molecular and cellular mechanisms of beneficial impacts of NMES. It is known that electrical stimulation increases both the number and size of AChR clusters in primary myoblasts. The fact that expression of Rhapsyn is also increased indicates that the increased AChR clusters are leading to increased mature NMJs. However, clearly more mechanistic studies regarding the effects of NMES on muscular dystrophies are warranted.”</p><disp-quote content-type="editor-comment"><p>(2) The authors suggest that NMES may be working through modification of ECM-cell adhesion. They present data showing failure of itga7 mutants to respond to NMES. While this provides evidence that itga7 is potentially involved in mediated response in WT fish, it does not inform on the situation with dmd. The ideal experiment would of course be to test NMES in the setting of itag7/dmd double knockouts. At the very least, the fact that this link is not firmly established in the dmd model needs to be pointed out.</p></disp-quote><p>We agree with the reviewers that we only tested itga7 in the context of itga7 mutant fish. We have not yet generated double mutants, mostly because data from Szatl et al., 2012 (Epistatic dissection of laminin-receptor interactions) strongly suggests that itga7;dmd double mutants would be so disrupted that it would be impossible to interpret results (The Currie group generated dmd;integrin linked kinase double mutants and showed severe disruption).</p><p>We have added the following sentences:</p><p>– To the Results section: “Thus, Itga7 is required for eNMES-mediated improvement of muscle structure, at least in the context of itga7 mutants”.</p><p>– To the Discussion section “Itga7 mutant larvae did not improve with eNMES, indicating that Itga7 is required for eNMES-mediated improvement. We did not generate dmd;itag7 double mutants to test whether eNMES is not effective in this context, which would be interesting to do.”</p><disp-quote content-type="editor-comment"><p>(3) The authors also implicate TGFb signalling based on RNAseq data. The authors rightly point out the short comings of RNAseq for uncovering the important pathways; this is particularly true for TGFb signalling, which is very much regulated and governed at the level of post translational changes. There are simple assays for examining TGFb signalling and activity that have been utilized in other DMD models (such as mdx) and in zebrafish. Such assays would lend support to the RNAseq data, which on its own its relatively weak proof of the involvement of the ECM and TGFb.</p></disp-quote><p>The reviewers are correct that Tgfbeta-induced is downstream of TGFb signaling, and that RNAseq data is not strong evidence for the role of cell adhesion to the ECM changing in response to neuromuscular electrical stimulation. This is why we conducted the cell adhesion experiments shown in Figure 9, which suggest that cell adhesion is increased with eNMES.</p><p>We agree with the reviewers that using an assay for TGFb signaling at the protein level would be more informative. We thus stained control and eNMES wild-type and control and eNMES mutants for p-Smad. Please note that this has not previously been done in older fish. We did the experiment twice and imaged 68 embryos at at least three locations – anterior, middle, and posterior at 5, 6, and 7 days old. Unfortunately, the only conclusion that we can make from these data is that we can’t conclude anything. p-Smad staining is incredibly variable in zebrafish skeletal muscle at 5,6,7 days (this has not previously been investigated). As an example I put one panel (<xref ref-type="fig" rid="sa2fig1">Author response image 1</xref>) that highlights just a couple of the muscle fibers with p-Smad positive nuclei in a wild-type embryo at 7 days (yellow arrows point to positive nuclei), as well as quantification of the data at 5 days – clearly showing dramatic variability. We suspect that TGFb signaling at this time point is dynamic, and thus capturing consistent changes in p-Smad readout in fixed larvae is impossible.</p><fig id="sa2fig1" position="float"><label>Author response image 1.</label><graphic mime-subtype="tiff" mimetype="image" xlink:href="elife-62760-sa2-fig1-v1.tif"/></fig><p>Developing tools and image quantification methods for live readouts of TGFb signaling is an interesting future direction but out of the scope of this manuscript. We hope the reviewers agree with us that the cell adhesion assay clearly implicates cell adhesion, although the underlying mechanisms are not yet identified.</p></body></sub-article></article>