Information for 1-CTCCTGGGCTCTGGG (Motif 1)

A G T C G A C T A T G C G A T C G A C T A C T G C A T G T C A G A T G C G A C T A T G C C A G T T A C G C T A G T C A G
Reverse Opposite:
A G T C G A T C A T G C G T C A T A C G C T G A T A C G A G T C G A T C G T A C C T G A C T A G A T C G C T G A A C T G
p-value:1e-33
log p-value:-7.757e+01
Information Content per bp:1.671
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets105.9 +/- 44.2bp
Average Position of motif in Background103.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTCCTGGGCTCTGGG
WDNCTGGGCA-----
 A G T C G A C T A T G C G A T C G A C T A C T G C A T G T C A G A T G C G A C T A T G C C A G T T A C G C T A G T C A G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.2/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTCCTGGGCTCTGGG
--NNTGGACTTTGNN
 A G T C G A C T A T G C G A T C G A C T A C T G C A T G T C A G A T G C G A C T A T G C C A G T T A C G C T A G T C A G
A C G T A C G T G A C T A G T C G C A T C T A G C T A G G T C A T G A C G A C T A G C T A G C T C T A G T C A G G T C A

HNF4A/MA0114.4/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTCCTGGGCTCTGGG
--NNTGGACTTTGNN
 A G T C G A C T A T G C G A T C G A C T A C T G C A T G T C A G A T G C G A C T A T G C C A G T T A C G C T A G T C A G
A C G T A C G T G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A

Zic2/MA1629.1/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTCCTGGGCTCTGGG
CCCCCTGCTGTGNN-----
 A C G T A C G T A C G T A C G T A G T C G A C T A T G C G A T C G A C T A C T G C A T G T C A G A T G C G A C T A T G C C A G T T A C G C T A G T C A G
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G A C G T A C G T A C G T A C G T A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTCCTGGGCTCTGGG
NNCCTGCTGNG-------
 A C G T A C G T A C G T A G T C G A C T A T G C G A T C G A C T A C T G C A T G T C A G A T G C G A C T A T G C C A G T T A C G C T A G T C A G
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CTCCTGGGCTCTGGG
CCCCCTGCTGTG-------
 A C G T A C G T A C G T A C G T A G T C G A C T A T G C G A T C G A C T A C T G C A T G T C A G A T G C G A C T A T G C C A G T T A C G C T A G T C A G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTCCTGGGCTCTGGG
---CTGACCTTTG--
 A G T C G A C T A T G C G A T C G A C T A C T G C A T G T C A G A T G C G A C T A T G C C A G T T A C G C T A G T C A G
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CTCCTGGGCTCTGGG
GGCCYCCTGCTGDGH------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T A T G C G A T C G A C T A C T G C A T G T C A G A T G C G A C T A T G C C A G T T A C G C T A G T C A G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTCCTGGGCTCTGGG
NNTCCTGCTGTGNNN----
 A C G T A C G T A C G T A C G T A G T C G A C T A T G C G A T C G A C T A C T G C A T G T C A G A T G C G A C T A T G C C A G T T A C G C T A G T C A G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTCCTGGGCTCTGGG
TCNCCTGCTGNGNNN----
 A C G T A C G T A C G T A C G T A G T C G A C T A T G C G A T C G A C T A C T G C A T G T C A G A T G C G A C T A T G C C A G T T A C G C T A G T C A G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T