Information for 4-CTCAACTTAT (Motif 18)

T A G C A C G T G T A C C G T A C G T A A G T C A G C T A C G T G C T A A C G T
Reverse Opposite:
G T C A C A G T C G T A C T G A A C T G C G A T A C G T C A T G C G T A A C T G
p-value:1e-20
log p-value:-4.742e+01
Information Content per bp:1.855
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets100.5 +/- 57.9bp
Average Position of motif in Background92.3 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTCAACTTAT
-TGAACTCA-
 T A G C A C G T G T A C C G T A C G T A A G T C A G C T A C G T G C T A A C G T
A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T

PHOX2B/MA0681.2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CTCAACTTAT--
TTTAATCAAATTATAT
 A C G T A C G T A C G T A C G T T A G C A C G T G T A C C G T A C G T A A G T C A G C T A C G T G C T A A C G T A C G T A C G T
C G A T G C A T G C A T C G T A C G T A G C A T G A T C G C T A G C T A C G T A C G A T G C A T C G T A C G A T G C T A G C A T

NR1I3/MA1534.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTCAACTTAT
ATGAACTTT-
 T A G C A C G T G T A C C G T A C G T A A G T C A G C T A C G T G C T A A C G T
C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTCAACTTAT--
--AACCTTATAT
 T A G C A C G T G T A C C G T A C G T A A G T C A G C T A C G T G C T A A C G T A C G T A C G T
A C G T A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

MYB/MA0100.3/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTCAACTTAT
ACCAACTGTC
 T A G C A C G T G T A C C G T A C G T A A G T C A G C T A C G T G C T A A C G T
G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTCAACTTAT----
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T T A G C A C G T G T A C C G T A C G T A A G T C A G C T A C G T G C T A A C G T A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTCAACTTAT
-ACCACTTAA
 T A G C A C G T G T A C C G T A C G T A A G T C A G C T A C G T G C T A A C G T
A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTCAACTTAT----
CATAACCACTTAACAAC
 A C G T A C G T A C G T T A G C A C G T G T A C C G T A C G T A A G T C A G C T A C G T G C T A A C G T A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

SREBF1(var.2)/MA0829.2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTCAACTTAT--
AGATCACCTGATCT
 A C G T A C G T T A G C A C G T G T A C C G T A C G T A A G T C A G C T A C G T G C T A A C G T A C G T A C G T
C T G A T C A G T C G A G C A T A T G C G C T A A T G C T A G C G C A T A T C G G C T A A G C T A G T C G A C T

Nkx3-2/MA0122.3/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTCAACTTAT-
ATAACCACTTAAA
 A C G T A C G T T A G C A C G T G T A C C G T A C G T A A G T C A G C T A C G T G C T A A C G T A C G T
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A