Information for 11-TACGAATTAAGG (Motif 21)

C G A T C G T A G T A C A C T G G C T A C T G A A C G T A C G T G T C A C G T A A C T G A C T G
Reverse Opposite:
G T A C A G T C C G A T A C G T T C G A C G T A G A C T C A G T A G T C C A T G C G A T C G T A
p-value:1e-19
log p-value:-4.523e+01
Information Content per bp:1.756
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets111.7 +/- 37.2bp
Average Position of motif in Background97.7 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0028.1_En1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TACGAATTAAGG-
GCGAACTAATTAATGC
 A C G T A C G T A C G T C G A T C G T A G T A C A C T G G C T A C T G A A C G T A C G T G T C A C G T A A C T G A C T G A C G T
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

PH0062.1_Hoxb7/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TACGAATTAAGG---
GTAGTAATTAATGCAA
 A C G T C G A T C G T A G T A C A C T G G C T A C T G A A C G T A C G T G T C A C G T A A C T G A C T G A C G T A C G T A C G T
A T C G A G C T T G C A A C T G G A C T G T C A G C T A C G A T C A G T C T G A T G C A A C G T C A T G A T G C G C T A C T G A

PH0175.1_Vax2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TACGAATTAAGG-
GTGCACTAATTAAGAC
 A C G T A C G T A C G T C G A T C G T A G T A C A C T G G C T A C T G A A C G T A C G T G T C A C G T A A C T G A C T G A C G T
A C T G C G A T T A C G A T G C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C G T A T C G A A C T G T C G A T A G C

PH0108.1_Msx3/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TACGAATTAAGG-
CAAAACCAATTAATTT
 A C G T A C G T A C G T C G A T C G T A G T A C A C T G G C T A C T G A A C G T A C G T G T C A C G T A A C T G A C T G A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PH0135.1_Phox2a/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TACGAATTAAGG---
NNACTAATTAATNNNN
 A C G T C G A T C G T A G T A C A C T G G C T A C T G A A C G T A C G T G T C A C G T A A C T G A C T G A C G T A C G T A C G T
A T G C A G C T T C G A G A T C A G C T G T C A C G T A A G C T A C G T C T G A C T G A A G C T C A T G T G A C A G C T T C A G

PH0006.1_Barhl2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TACGAATTAAGG-
AAAAACCAATTAAGAA
 A C G T A C G T A C G T C G A T C G T A G T A C A C T G G C T A C T G A A C G T A C G T G T C A C G T A A C T G A C T G A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PH0055.1_Hoxa7_2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TACGAATTAAGG---
GTAGTAATTAATGGAA
 A C G T C G A T C G T A G T A C A C T G G C T A C T G A A C G T A C G T G T C A C G T A A C T G A C T G A C G T A C G T A C G T
A C T G A C G T T G C A A C T G G C A T G T C A C G T A A C G T C A G T C G T A T G C A A C G T T C A G A T C G G T C A T G C A

PH0173.1_Uncx/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TACGAATTAAGG--
CATAATTAATTAACGCG
 A C G T A C G T A C G T C G A T C G T A G T A C A C T G G C T A C T G A A C G T A C G T G T C A C G T A A C T G A C T G A C G T A C G T
T G A C C T G A G C A T C T G A T G C A A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A G T C T A C G T A G C A C T G

PH0159.1_Rhox6/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TACGAATTAAGG--
NNGCATTAATTAANGCA
 A C G T A C G T A C G T C G A T C G T A G T A C A C T G G C T A C T G A A C G T A C G T G T C A C G T A A C T G A C T G A C G T A C G T
C T A G C G T A A T C G T G A C T C G A G A C T G A C T G C T A T C G A A C G T C G A T C G T A C T G A A C T G C A T G A G T C C G T A

PH0005.1_Barhl1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TACGAATTAAGG-
AACAACCAATTAATTC
 A C G T A C G T A C G T C G A T C G T A G T A C A C T G G C T A C T G A A C G T A C G T G T C A C G T A A C T G A C T G A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C