Information for 7-AACAGACGAAAGGTC (Motif 23)

C T G A C T G A T G A C C T G A T C A G C T G A T A G C T C A G T C G A T C G A T C G A C T A G A C T G A C G T A T G C
Reverse Opposite:
T A C G T G C A T G A C G A T C A G C T A G C T A G C T A G T C A T C G G A C T A G T C G A C T A C T G G A C T A G C T
p-value:1e-19
log p-value:-4.478e+01
Information Content per bp:1.592
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets109.0 +/- 50.7bp
Average Position of motif in Background111.1 +/- 77.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF7L1/MA1421.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AACAGACGAAAGGTC
-AAAGATCAAAGG--
 C T G A C T G A T G A C C T G A T C A G C T G A T A G C T C A G T C G A T C G A T C G A C T A G A C T G A C G T A T G C
A C G T G C T A C T G A C G T A A T C G C G T A A C G T G T A C T G C A C G T A C T G A A T C G C T A G A C G T A C G T

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AACAGACGAAAGGTC-
-VNAGGKCAAAGGTCA
 C T G A C T G A T G A C C T G A T C A G C T G A T A G C T C A G T C G A T C G A T C G A C T A G A C T G A C G T A T G C A C G T
A C G T T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A

NR4A1/MA1112.2/Jaspar

Match Rank:3
Score:0.64
Offset:6
Orientation:forward strand
Alignment:AACAGACGAAAGGTC---
------TTAAAGGTCAAA
 C T G A C T G A T G A C C T G A T C A G C T G A T A G C T C A G T C G A T C G A T C G A C T A G A C T G A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AACAGACGAAAGGTC-
----ANGNAAAGGTCA
 C T G A C T G A T G A C C T G A T C A G C T G A T A G C T C A G T C G A T C G A T C G A C T A G A C T G A C G T A T G C A C G T
A C G T A C G T A C G T A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AACAGACGAAAGGTC-
--TAGGGCAAAGGTCA
 C T G A C T G A T G A C C T G A T C A G C T G A T A G C T C A G T C G A T C G A T C G A C T A G A C T G A C G T A T G C A C G T
A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AACAGACGAAAGGTC-----
----TCTCAAAGGTCACGAG
 C T G A C T G A T G A C C T G A T C A G C T G A T A G C T C A G T C G A T C G A T C G A C T A G A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AACAGACGAAAGGTC
VSCACATCAAAG---
 C T G A C T G A T G A C C T G A T C A G C T G A T A G C T C A G T C G A T C G A T C G A C T A G A C T G A C G T A T G C
T G C A A T G C T G A C C G T A A T G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G A C G T A C G T A C G T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AACAGACGAAAGGTC
---ASATCAAAGG--
 C T G A C T G A T G A C C T G A T C A G C T G A T A G C T C A G T C G A T C G A T C G A C T A G A C T G A C G T A T G C
A C G T A C G T A C G T C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T

HNF4A(var.2)/MA1494.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AACAGACGAAAGGTC--
--GGGTCCAAAGGTCAC
 C T G A C T G A T G A C C T G A T C A G C T G A T A G C T C A G T C G A T C G A T C G A C T A G A C T G A C G T A T G C A C G T A C G T
A C G T A C G T T C A G C T A G C A T G C A G T G A T C G A T C C T G A C G T A C T G A A C T G C A T G A C G T A G T C C T G A G T A C

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AACAGACGAAAGGTC-----
----TCTCAAAGGTCACCTG
 C T G A C T G A T G A C C T G A T C A G C T G A T A G C T C A G T C G A T C G A T C G A C T A G A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G