Motif 3

Information for 2-GGTCCCGCCTCC (Motif 3)

Reverse Opposite:

p-value:	1e-27
log p-value:	-6.296e+01
Information Content per bp:	1.716
Number of Target Sequences with motif	32.0
Percentage of Target Sequences with motif	1.38%
Number of Background Sequences with motif	3.8
Percentage of Background Sequences with motif	0.10%
Average Position of motif in Targets	104.0 +/- 55.6bp
Average Position of motif in Background	99.4 +/- 44.3bp
Strand Bias (log2 ratio + to - strand density)	0.1
Multiplicity (# of sites on avg that occur together)	1.04
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

E2F6/MA0471.2/Jaspar

Match Rank:	1
Score:	0.73
Offset:	-1
Orientation:	reverse strand
Alignment:	-GGTCCCGCCTCC NNTTCCCGCCNNN

Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:	2
Score:	0.73
Offset:	-1
Orientation:	forward strand
Alignment:	-GGTCCCGCCTCC YGGCCCCGCCCC-

POL011.1_XCPE1/Jaspar

Match Rank:	3
Score:	0.72
Offset:	0
Orientation:	reverse strand
Alignment:	GGTCCCGCCTCC GGTCCCGCCC--

Sp1(Zf)/Promoter/Homer

Match Rank:	4
Score:	0.72
Offset:	0
Orientation:	forward strand
Alignment:	GGTCCCGCCTCC GGCCCCGCCCCC

PB0076.1_Sp4_1/Jaspar

Match Rank:	5
Score:	0.69
Offset:	0
Orientation:	forward strand
Alignment:	GGTCCCGCCTCC----- GGTCCCGCCCCCTTCTC

MAZ/MA1522.1/Jaspar

Match Rank:	6
Score:	0.68
Offset:	3
Orientation:	forward strand
Alignment:	GGTCCCGCCTCC-- ---CGCCCCTCCCC

KLF15/MA1513.1/Jaspar

Match Rank:	7
Score:	0.66
Offset:	1
Orientation:	forward strand
Alignment:	GGTCCCGCCTCC -GCCCCGCCCCC

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:	8
Score:	0.66
Offset:	1
Orientation:	reverse strand
Alignment:	GGTCCCGCCTCC -TTCCCGCCWG-

TFDP1/MA1122.1/Jaspar

Match Rank:	9
Score:	0.66
Offset:	-1
Orientation:	reverse strand
Alignment:	-GGTCCCGCCTCC NNTTCCCGCCN--

POL003.1_GC-box/Jaspar

Match Rank:	10
Score:	0.66
Offset:	-1
Orientation:	reverse strand
Alignment:	-GGTCCCGCCTCC- NAGCCCCGCCCCCN