Information for 11-CTGTGGCTCG (Motif 30)

A T G C A C G T A C T G G A C T A C T G A C T G A T G C A C G T A G T C A T C G
Reverse Opposite:
A T G C A C T G C G T A A T C G A G T C G T A C C G T A A G T C C G T A A T C G
p-value:1e-16
log p-value:-3.883e+01
Information Content per bp:1.858
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets96.3 +/- 59.8bp
Average Position of motif in Background132.1 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTGTGGCTCG
GTCTGTGGTTT-
 A C G T A C G T A T G C A C G T A C T G G A C T A C T G A C T G A T G C A C G T A G T C A T C G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTGTGGCTCG
CTGTGGTTTN
 A T G C A C G T A C T G G A C T A C T G A C T G A T G C A C G T A G T C A T C G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGGCTCG
NNTGTGGTTT-
 A C G T A T G C A C G T A C T G G A C T A C T G A C T G A T G C A C G T A G T C A T C G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGGCTCG
NNHTGTGGTTWN
 A C G T A C G T A T G C A C G T A C T G G A C T A C T G A C T G A T G C A C G T A G T C A T C G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGCTCG
GCTGTGGTTT-
 A C G T A T G C A C G T A C T G G A C T A C T G A C T G A T G C A C G T A G T C A T C G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGCTCG
GCTGTG-----
 A C G T A T G C A C G T A C T G G A C T A C T G A C T G A T G C A C G T A G T C A T C G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CTGTGGCTCG
GGGCCTGAGGCGGG
 A C G T A C G T A C G T A C G T A T G C A C G T A C T G G A C T A C T G A C T G A T G C A C G T A G T C A T C G
A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGGCTCG
GCTCGGSCTC-
 A C G T A T G C A C G T A C T G G A C T A C T G A C T G A T G C A C G T A G T C A T C G
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

SCRT2/MA0744.2/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CTGTGGCTCG
NNNCACCTGTTGCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T A C T G G A C T A C T G A C T G A T G C A C G T A G T C A T C G
C G T A C T G A G T A C G T A C C T G A G T A C G A T C C G A T A T C G G A C T C A G T C T A G T G A C G C A T A G C T G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTGTGGCTCG
----NGCTN-
 A T G C A C G T A C T G G A C T A C T G A C T G A T G C A C G T A G T C A T C G
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T