Information for 2-GCGCCTGA (Motif 42)

A C T G A G T C A C T G A G T C A T G C A C G T A C T G C G T A
Reverse Opposite:
A C G T G T A C G T C A A T C G C T A G A G T C A C T G A G T C
p-value:1e-13
log p-value:-3.217e+01
Information Content per bp:1.927
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets82.5 +/- 53.2bp
Average Position of motif in Background111.6 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCFL5/MA0632.2/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GCGCCTGA
GTGCGCGTGA
 A C G T A C G T A C T G A G T C A C T G A G T C A T G C A C G T A C T G C G T A
C A T G C A G T A T C G A G T C C T A G A G T C C T A G G A C T A C T G T G C A

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCGCCTGA
AGCGCGCC---
 A C G T A C G T A C G T A C T G A G T C A C T G A G T C A T G C A C G T A C T G C G T A
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GCGCCTGA
TTTGGCGCCAAA
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A T G C A C G T A C T G C G T A
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

E2F2/MA0864.2/Jaspar

Match Rank:4
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GCGCCTGA--
NNAATGGCGCCAAAAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A T G C A C G T A C T G C G T A A C G T A C G T
T C A G C G T A G C T A C G T A C A G T A T C G A T C G G A T C A C T G A T G C A T G C G C T A G C T A G C T A G C T A A G T C

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCGCCTGA------
GGGCCTGAGGCGGG
 A C T G A G T C A C T G A G T C A T G C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G

TCF4/MA0830.2/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCGCCTGA---
CGGCACCTGCCCC
 A C G T A C G T A C T G A G T C A C T G A G T C A T G C A C G T A C T G C G T A A C G T A C G T A C G T
A T G C C A T G T A C G T A G C T C G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

TFAP2A/MA0003.4/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCGCCTGA------
NNGCCTGAGGCANN
 A C T G A G T C A C T G A G T C A T G C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T

E2F4/MA0470.2/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCTGA-
NAATGGCGCCAAAA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A T G C A C G T A C T G C G T A A C G T
C G T A C G T A C G T A C A G T T A C G A T C G G T A C C A T G A T G C A T G C G T C A G T C A G C T A G C T A

PB0008.1_E2F2_1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCTGA--
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A T G C A C G T A C T G C G T A A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0113.1_E2F3_2/Jaspar

Match Rank:10
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------GCGCCTGA--
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A T G C A C G T A C T G C G T A A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T