Information for 18-TGGCAARGCCTG (Motif 43)

A C G T A C T G A T C G G T A C C G T A T C G A C T A G A C T G A T G C A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A T C G A G T C A G T C A G C T A C G T A C T G A T G C G T A C C G T A
p-value:1e-13
log p-value:-3.132e+01
Information Content per bp:1.854
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets97.0 +/- 47.2bp
Average Position of motif in Background103.2 +/- 49.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGGCAARGCCTG
GGGGCCGAGGCCTG
 A C G T A C G T A C G T A C T G A T C G G T A C C G T A T C G A C T A G A C T G A T G C A G T C A C G T A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TGGCAARGCCTG
---CNAGGCCT-
 A C G T A C T G A T C G G T A C C G T A T C G A C T A G A C T G A T G C A G T C A C G T A C T G
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGGCAARGCCTG
TTGCCAAG-----
 A C G T A C G T A C T G A T C G G T A C C G T A T C G A C T A G A C T G A T G C A G T C A C G T A C T G
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGGCAARGCCTG-
ATGCCCGGGCATGT
 A C G T A C G T A C T G A T C G G T A C C G T A T C G A C T A G A C T G A T G C A G T C A C G T A C T G A C G T
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGGCAARGCCTG
---CTAGGCCT-
 A C G T A C T G A T C G G T A C C G T A T C G A C T A G A C T G A T G C A G T C A C G T A C T G
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAARGCCTG
VGCTGGCA-------
 A C G T A C G T A C G T A C G T A C T G A T C G G T A C C G T A T C G A C T A G A C T G A T G C A G T C A C G T A C T G
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGGCAARGCCTG
GGTGCCAAGT----
 A C G T A C G T A C G T A C T G A T C G G T A C C G T A T C G A C T A G A C T G A T G C A G T C A C G T A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGGCAARGCCTG-------
----AAAACCTGGANHGGR
 A C G T A C T G A T C G G T A C C G T A T C G A C T A G A C T G A T G C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A T C G A T C G A A G T C T G A C G A C T A C T G C T A G G T C A T A G C G C A T T C A G C T A G T C A G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGGCAARGCCTG
-NTCAAGGTCA-
 A C G T A C T G A T C G G T A C C G T A T C G A C T A G A C T G A T G C A G T C A C G T A C T G
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGGCAARGCCTG
CGTGCCAAG-----
 A C G T A C G T A C G T A C T G A T C G G T A C C G T A T C G A C T A G A C T G A T G C A G T C A C G T A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T