Information for 6-TGTGTGTGTTYTTGAGATRA (Motif 52)

C A G T C A T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G C T G C A T A C T G C T G A C T A G T C G A A C G T C T A G C G T A
Reverse Opposite:
G C A T A G T C T G C A A G C T A G T C A G C T G T A C C G T A C T G A T C A G G T C A T G C A T G A C C G T A G T A C C G T A T G A C G T C A G T A C G C T A
p-value:1e-12
log p-value:-2.829e+01
Information Content per bp:1.676
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets103.6 +/- 42.1bp
Average Position of motif in Background138.1 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TGTGTGTGTTYTTGAGATRA
NNNNTTTGTTTACNNT--------
 A C G T A C G T A C G T A C G T C A G T C A T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G C T G C A T A C T G C T G A C T A G T C G A A C G T C T A G C G T A
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGTGTGTGTTYTTGAGATRA
TTTTTTTTTTTTTTCAGGTT-
 A C G T C A G T C A T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G C T G C A T A C T G C T G A C T A G T C G A A C G T C T A G C G T A
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGTGTGTGTTYTTGAGATRA
-GAATGTTTGTTT-------
 C A G T C A T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G C T G C A T A C T G C T G A C T A G T C G A A C G T C T A G C G T A
A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGTGTGTGTTYTTGAGATRA
-GTCTGTGGTTT--------
 C A G T C A T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G C T G C A T A C T G C T G A C T A G T C G A A C G T C T A G C G T A
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGTGTGTGTTYTTGAGATRA
TTTTTTTTTTTTTTCAGGTT-
 A C G T C A G T C A T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G C T G C A T A C T G C T G A C T A G T C G A A C G T C T A G C G T A
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTGTGTTYTTGAGATRA
NNNNTTGTGTGCTTNN-----
 A C G T C A G T C A T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G C T G C A T A C T G C T G A C T A G T C G A A C G T C T A G C G T A
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGTGTGTGTTYTTGAGATRA
NNNNTTTTTTTTTNAAC---
 C A G T C A T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G C T G C A T A C T G C T G A C T A G T C G A A C G T C T A G C G T A
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTGTGTTYTTGAGATRA
NNGCGTGTGTGCNGCN-------
 A C G T A C G T A C G T C A G T C A T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G C T G C A T A C T G C T G A C T A G T C G A A C G T C T A G C G T A
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGTGTGTTYTTGAGATRA
ANTCCTTTGTCTNNNN---------
 A C G T A C G T A C G T A C G T A C G T C A G T C A T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G C T G C A T A C T G C T G A C T A G T C G A A C G T C T A G C G T A
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TGTGTGTGTTYTTGAGATRA
-NNHTGTGGTTWN-------
 C A G T C A T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G C T G C A T A C T G C T G A C T A G T C G A A C G T C T A G C G T A
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T