Information for 9-TAACGATA (Motif 65)

C G A T C G T A G T C A A G T C A C T G C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A G T C C T A G A C G T C G A T C G T A
p-value:1e-10
log p-value:-2.318e+01
Information Content per bp:1.869
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets88.3 +/- 63.2bp
Average Position of motif in Background96.7 +/- 56.5bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TAACGATA----
-AAGGATATNTN
 C G A T C G T A G T C A A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

GATA3/MA0037.3/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TAACGATA---
---AGATAAGA
 C G A T C G T A G T C A A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A C T G C G T A A C G T G C T A C T G A T A C G T C G A

HOXA4/MA1496.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TAACGATA
NTAATGAC-
 A C G T C G A T C G T A G T C A A G T C A C T G C G T A A C G T C G T A
A G T C A G C T T C G A G T C A A G C T A C T G C T G A A G T C A C G T

PH0044.1_Homez/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TAACGATA----
NNTAAAAACGATGTTNT
 A C G T A C G T A C G T A C G T A C G T C G A T C G T A G T C A A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

CUX2/MA0755.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TAACGATA-
TAATCGATAA
 A C G T C G A T C G T A G T C A A G T C A C T G C G T A A C G T C G T A A C G T
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TAACGATA
NTNATCGATA
 A C G T A C G T C G A T C G T A G T C A A G T C A C T G C G T A A C G T C G T A
G C A T A G C T C A G T T C G A A G C T G A T C C T A G T C G A A C G T T G C A

PB0022.1_Gata5_1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TAACGATA-------
TAAACTGATAAGAAGAT
 A C G T A C G T C G A T C G T A G T C A A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

HOXB4/MA1499.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TAACGATA
NTAATGAT-
 A C G T C G A T C G T A G T C A A G T C A C T G C G T A A C G T C G T A
A G T C A G C T G T C A C G T A A G C T A C T G C T G A A G C T A C G T

GATA5/MA0766.2/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TAACGATA----
--CAGATAAGGA
 C G A T C G T A G T C A A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G C T A A C T G C G T A A C G T C G T A C G T A A T C G T C A G T G C A

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TAACGATA---
---AGATAASR
 C G A T C G T A G T C A A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A