Information for 2-CGCCTGCAGCCCTGG (Motif 11)

A T G C A T C G A T G C G T A C G C A T T A C G T A G C C G T A A T C G A T G C A G T C G A T C G C A T A C T G A T C G
Reverse Opposite:
A T G C T G A C C G T A C T A G T C A G T A C G T A G C G C A T A T C G A T G C C G T A C A T G T A C G T A G C T A C G
p-value:1e-67
log p-value:-1.556e+02
Information Content per bp:1.853
Number of Target Sequences with motif116.0
Percentage of Target Sequences with motif5.02%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets92.0 +/- 54.0bp
Average Position of motif in Background103.7 +/- 52.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGCCTGCAGCCCTGG
NNCCTGCTGNG----
 A T G C A T C G A T G C G T A C G C A T T A C G T A G C C G T A A T C G A T G C A G T C G A T C G C A T A C T G A T C G
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G A C G T A C G T A C G T A C G T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGCAGCCCTGG
CGCACCTGCCG------
 A C G T A C G T A T G C A T C G A T G C G T A C G C A T T A C G T A G C C G T A A T C G A T G C A G T C G A T C G C A T A C T G A T C G
T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.3/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGCAGCCCTGG
CGCACCTGCCC------
 A C G T A C G T A T G C A T C G A T G C G T A C G C A T T A C G T A G C C G T A A T C G A T G C A G T C G A T C G C A T A C T G A T C G
T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB6/MA1581.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGCCTGCAGCCCTGG
GTCCTTGAGCCCG--
 A T G C A T C G A T G C G T A C G C A T T A C G T A G C C G T A A T C G A T G C A G T C G A T C G C A T A C T G A T C G
C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CGCCTGCAGCCCTGG
SNGCACCTGCHS------
 A C G T A C G T A C G T A T G C A T C G A T G C G T A C G C A T T A C G T A G C C G T A A T C G A T G C A G T C G A T C G C A T A C T G A T C G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CGCCTGCAGCCCTGG
-------AGGCCTNG
 A T G C A T C G A T G C G T A C G C A T T A C G T A G C C G T A A T C G A T G C A G T C G A T C G C A T A C T G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CGCCTGCAGCCCTGG
CAGCACCTGCCCC-----
 A C G T A C G T A C G T A T G C A T C G A T G C G T A C G C A T T A C G T A G C C G T A A T C G A T G C A G T C G A T C G C A T A C T G A T C G
A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CGCCTGCAGCCCTGG
CGGCACCTGCCCC-----
 A C G T A C G T A C G T A T G C A T C G A T G C G T A C G C A T T A C G T A G C C G T A A T C G A T G C A G T C G A T C G C A T A C T G A T C G
A T G C C A T G T A C G T A G C T C G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C A C G T A C G T A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CGCCTGCAGCCCTGG
--GCTGTTACCCT--
 A T G C A T C G A T G C G T A C G C A T T A C G T A G C C G T A A T C G A T G C A G T C G A T C G C A T A C T G A T C G
A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CGCCTGCAGCCCTGG
GGCCYCCTGCTGDGH---
 A C G T A C G T A C G T A T G C A T C G A T G C G T A C G C A T T A C G T A G C C G T A A T C G A T G C A G T C G A T C G C A T A C T G A T C G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T