Information for 3-CAGAGAGGCC (Motif 12)

A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C T G
p-value:1e-67
log p-value:-1.544e+02
Information Content per bp:1.530
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif3.85%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets114.5 +/- 50.5bp
Average Position of motif in Background129.5 +/- 45.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:1
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---CAGAGAGGCC
RHHCAGAGAGGB-
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C T G A G T C A G T C
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CAGAGAGGCC-
-HAWGRGGCCM
 A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C T G A G T C A G T C A C G T
A C G T G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CAGAGAGGCC---
-----AGGCCTNG
 A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CAGAGAGGCC-
---CTAGGCCT
 A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CAGAGAGGCC--------
----CAGGCCNNGGCCNN
 A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CAGAGAGGCC-
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C T G A G T C A G T C A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGAGGCC
CCAGACRSVB-
 A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C T G A G T C A G T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

ZNF528/MA1597.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGAGAGGCC-----
CCCAGGGAAGCCATTTC
 A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G A T C A G T C T G A C C T G A C T A G C T A G C T A G T C G A C T G A C T A G A G T C G T A C T C G A A G C T A G C T A G C T G A T C

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CAGAGAGGCC-
CTCCCTGGGAGGCCN
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C T G A G T C A G T C A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

OSR2/MA1646.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAGAGAGGCC-
AAACAGAAGCAG
 A C G T A G T C C G T A A C T G C G T A A C T G C G T A A C T G A C T G A G T C A G T C A C G T
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G