Information for 2-TGTGGGCA (Motif 2)

A C G T A T C G A C G T A C T G A C T G A C T G A T G C C G T A
Reverse Opposite:
A C G T A T C G G T A C A G T C T G A C C G T A A T G C G T C A
p-value:1e-88
log p-value:-2.039e+02
Information Content per bp:1.890
Number of Target Sequences with motif107.0
Percentage of Target Sequences with motif4.63%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets92.2 +/- 56.8bp
Average Position of motif in Background50.4 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TGTGGGCA-
NGTGGGCAT
 A C G T A T C G A C G T A C T G A C T G A C T G A T G C C G T A A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TGTGGGCA-
TNNGGGCAG
 A C G T A T C G A C G T A C T G A C T G A C T G A T G C C G T A A C G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGTGGGCA-
GGTTGGCAT
 A C G T A T C G A C G T A C T G A C T G A C T G A T G C C G T A A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

ZNF75D/MA1601.1/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TGTGGGCA-
ATGTGGGAAA
 A C G T A C G T A T C G A C G T A C T G A C T G A C T G A T G C C G T A A C G T
T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGTGGGCA--
NNTTGGCANN
 A C G T A T C G A C G T A C T G A C T G A C T G A T G C C G T A A C G T A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGGCA-
NNHTGTGGTTWN
 A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C T G A T G C C G T A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TGTGGGCA----
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

MZF1/MA0056.2/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGGCA----
NNNTGGGGATTNN
 A C G T A C G T A T C G A C G T A C T G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T
T C G A C G T A C T A G C G A T C T A G C T A G C A T G A C T G G C T A A C G T A C G T C G A T C A T G

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGGCA-----
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

RBPJ/MA1116.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGTGGGCA--
CCTGGGAAAG
 A C G T A T C G A C G T A C T G A C T G A C T G A T G C C G T A A C G T A C G T
A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G