Information for 11-CGTTCGTG (Motif 32)

A G T C A C T G A C G T A C G T A G T C A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C T G C G T A C G T A A G T C A C T G
p-value:1e-43
log p-value:-9.908e+01
Information Content per bp:1.530
Number of Target Sequences with motif67.0
Percentage of Target Sequences with motif2.90%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets92.9 +/- 55.6bp
Average Position of motif in Background143.8 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGTTCGTG----
NHGTCGTGAYDN
 A G T C A C T G A C G T A C G T A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T
C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGTTCGTG---
-TTGCGTGCVA
 A G T C A C T G A C G T A C G T A G T C A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGTTCGTG-
GGGTACGTGC
 A C G T A G T C A C T G A C G T A C G T A G T C A C T G A C G T A C T G A C G T
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGTTCGTG-
-GGACGTGC
 A G T C A C T G A C G T A C G T A G T C A C T G A C G T A C T G A C G T
A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGTTCGTG-
-RTACGTGC
 A G T C A C T G A C G T A C G T A G T C A C T G A C G T A C T G A C G T
A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGTTCGTG
--TGCGTG
 A G T C A C T G A C G T A C G T A G T C A C T G A C G T A C T G
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGTTCGTG----
RGTTAGTGCCCY
 A G T C A C T G A C G T A C G T A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGTTCGTG--
--TACGTGCV
 A G T C A C T G A C G T A C G T A G T C A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

ZBTB12/MA1649.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGTTCGTG--
NNGTTCCAGNN
 A C G T A G T C A C T G A C G T A C G T A G T C A C T G A C G T A C T G A C G T A C G T
T C A G C A T G C T A G G A C T A C G T G T A C A G T C T C G A A T C G T C G A A G C T

HIF1A/MA1106.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGTTCGTG---
-GTACGTGCCC
 A G T C A C T G A C G T A C G T A G T C A C T G A C G T A C T G A C G T A C G T A C G T
A C G T T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C