Information for 10-NNNNNAAMMANNNNN (Motif 41)

T C G A T G C A C G T A A C T G G T C A T C G A C G T A G T A C G T A C G T C A T G A C C G A T T C G A T G C A T C G A
Reverse Opposite:
A C G T A C G T A G C T G C T A A C T G C A G T C A T G C A T G G C A T A G C T C A G T T G A C G A C T A C G T A C G T
p-value:1e-38
log p-value:-8.849e+01
Information Content per bp:1.318
Number of Target Sequences with motif101.0
Percentage of Target Sequences with motif4.37%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets97.0 +/- 53.3bp
Average Position of motif in Background167.9 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.80
Offset:4
Orientation:forward strand
Alignment:NNNNNAAMMANNNNN
----AAACCACANN-
 T C G A T G C A C G T A A C T G G T C A T C G A C G T A G T A C G T A C G T C A T G A C C G A T T C G A T G C A T C G A
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.77
Offset:3
Orientation:forward strand
Alignment:NNNNNAAMMANNNNN
---NAAACCACAG--
 T C G A T G C A C G T A A C T G G T C A T C G A C G T A G T A C G T A C G T C A T G A C C G A T T C G A T G C A T C G A
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.77
Offset:4
Orientation:reverse strand
Alignment:NNNNNAAMMANNNNN
----AAACCACAGAN
 T C G A T G C A C G T A A C T G G T C A T C G A C G T A G T A C G T A C G T C A T G A C C G A T T C G A T G C A T C G A
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:NNNNNAAMMANNNNN
----AAACCACAGC-
 T C G A T G C A C G T A A C T G G T C A T C G A C G T A G T A C G T A C G T C A T G A C C G A T T C G A T G C A T C G A
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.74
Offset:3
Orientation:forward strand
Alignment:NNNNNAAMMANNNNN
---NWAACCACADNN
 T C G A T G C A C G T A A C T G G T C A T C G A C G T A G T A C G T A C G T C A T G A C C G A T T C G A T G C A T C G A
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:NNNNNAAMMANNNNN
ACTGAAACCA-----
 T C G A T G C A C G T A A C T G G T C A T C G A C G T A G T A C G T A C G T C A T G A C C G A T T C G A T G C A T C G A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.67
Offset:4
Orientation:forward strand
Alignment:NNNNNAAMMANNNNN
----AAACCGCAA--
 T C G A T G C A C G T A A C T G G T C A T C G A C G T A G T A C G T A C G T C A T G A C C G A T T C G A T G C A T C G A
A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:8
Score:0.67
Offset:3
Orientation:forward strand
Alignment:NNNNNAAMMANNNNN
---AAAACCTCAAAT
 T C G A T G C A C G T A A C T G G T C A T C G A C G T A G T A C G T A C G T C A T G A C C G A T T C G A T G C A T C G A
A C G T A C G T A C G T C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

PB0036.1_Irf6_1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---NNNNNAAMMANNNNN
CTGATCGAAACCAAAGT-
 A C G T A C G T A C G T T C G A T G C A C G T A A C T G G T C A T C G A C G T A G T A C G T A C G T C A T G A C C G A T T C G A T G C A T C G A
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T A C G T

ONECUT1/MA0679.2/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:NNNNNAAMMANNNNN--
-AAAAAATCAATAAATA
 T C G A T G C A C G T A A C T G G T C A T C G A C G T A G T A C G T A C G T C A T G A C C G A T T C G A T G C A T C G A A C G T A C G T
A C G T C G T A C G T A C G T A G C T A C T G A C T G A G C A T G T A C C T G A C G T A G A C T C T G A G C T A G C T A G C A T G C T A