Information for 16-CGAGCTAG (Motif 44)

A G T C A C T G C G T A A C T G A G T C A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C T G A G T C A C G T A G T C A C T G
p-value:1e-34
log p-value:-8.022e+01
Information Content per bp:1.530
Number of Target Sequences with motif96.0
Percentage of Target Sequences with motif4.15%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets93.2 +/- 55.5bp
Average Position of motif in Background131.0 +/- 58.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGAGCTAG
-CAGCC--
 A G T C A C T G C G T A A C T G A G T C A C G T C G T A A C T G
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CGAGCTAG
GAGSCCGAGC---
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C T G A G T C A C G T C G T A A C T G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGAGCTAG
CGGAGC---
 A C G T A G T C A C T G C G T A A C T G A G T C A C G T C G T A A C T G
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CGAGCTAG--------
NNGATCTAGAACCTNNN
 A C G T A G T C A C T G C G T A A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

PRDM1/MA0508.3/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGAGCTAG--
NAGAGAAAGNA
 A C G T A G T C A C T G C G T A A C T G A G T C A C G T C G T A A C T G A C G T A C G T
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CGAGCTAG----
BCNGGTTCTAGANCN
 A C G T A C G T A C G T A G T C A C T G C G T A A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGAGCTAG
-AAGCTTG
 A G T C A C T G C G T A A C T G A G T C A C G T C G T A A C T G
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

Smad4/MA1153.1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CGAGCTAG---
---TCTAGACA
 A G T C A C T G C G T A A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CGAGCTAG-----
TTGACCTANTTATN
 A C G T A G T C A C T G C G T A A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CGAGCTAG
NAACAGCTGG
 A C G T A C G T A G T C A C T G C G T A A C T G A G T C A C G T C G T A A C T G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G