Information for 18-TTGADTGT (Motif 48)

A C G T A G C T A C T G C G T A C G T A A C G T C T A G A C G T
Reverse Opposite:
C G T A A G T C G T C A G C A T C G A T T A G C C T G A C G T A
p-value:1e-30
log p-value:-6.918e+01
Information Content per bp:1.807
Number of Target Sequences with motif73.0
Percentage of Target Sequences with motif3.16%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets99.1 +/- 57.2bp
Average Position of motif in Background128.1 +/- 39.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-5/MA0063.2/Jaspar

Match Rank:1
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--TTGADTGT-
NNTTGAGTGNN
 A C G T A C G T A C G T A G C T A C T G C G T A C G T A A C G T C T A G A C G T A C G T
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TTGADTGT
TTGATTGN
 A C G T A G C T A C T G C G T A C G T A A C G T C T A G A C G T
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

NKX2-2/MA1645.1/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TTGADTGT---
NNNTTGAGTGGNNN
 A C G T A C G T A C G T A C G T A G C T A C T G C G T A C G T A A C G T C T A G A C G T A C G T A C G T A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTGADTGT--
CTTGAGTGGCT
 A C G T A C G T A G C T A C T G C G T A C G T A A C G T C T A G A C G T A C G T A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

MSANTD3/MA1523.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTGADTGT--
GTGAGTGNAC
 A C G T A G C T A C T G C G T A C G T A A C G T C T A G A C G T A C G T A C G T
C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

TEAD4/MA0809.2/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTGADTGT--
NCTGGAATGTNN
 A C G T A C G T A C G T A G C T A C T G C G T A C G T A A C G T C T A G A C G T A C G T A C G T
A T G C G A T C C G A T C T A G T C A G G C T A T C G A C G A T A C T G G A C T C T A G C T A G

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTGADTGT-
TTTNATTGCY
 A C G T A C G T A G C T A C T G C G T A C G T A A C G T C T A G A C G T A C G T
A C G T A C G T C G A T A C G T G T C A A C G T C A G T C T A G A T G C G A T C

ONECUT1/MA0679.2/Jaspar

Match Rank:8
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------TTGADTGT--
NNTTTATTGATTTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C G T A C G T A A C G T C T A G A C G T A C G T A C G T
C G A T C G T A C G A T C G A T G A C T C T G A G C A T G A C T C A T G C G T A G A C T G A C T C G A T G C A T G C A T G C A T

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TTGADTGT----
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C G T A C G T A A C G T C T A G A C G T A C G T A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTGADTGT--
NTTTCATTRCHD
 A C G T A C G T A C G T A G C T A C T G C G T A C G T A A C G T C T A G A C G T A C G T A C G T
C G A T G C A T A C G T C G A T A G T C C G T A A C G T A C G T C T A G A G T C G A C T C A G T