Information for 18-TTTCTTAATCTATTT (Motif 56)

G C A T G C A T A C G T A T G C G C A T C G A T G C T A C G T A C G A T G A T C G C A T G T C A A C G T C G A T G C A T
Reverse Opposite:
C G T A G C T A T G C A C A G T C G T A C T A G G C T A G C A T C G A T G C T A C G T A T A C G T G C A C G T A C G T A
p-value:1e-23
log p-value:-5.398e+01
Information Content per bp:1.724
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif2.77%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets95.9 +/- 53.5bp
Average Position of motif in Background128.2 +/- 49.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0018.1_Dbx1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTCTTAATCTATTT
TNATTATTAATTAATTA
 A C G T A C G T G C A T G C A T A C G T A T G C G C A T C G A T G C T A C G T A C G A T G A T C G C A T G T C A A C G T C G A T G C A T
G A C T C G T A G C T A A G C T G A C T C G T A C G A T G C A T C G T A C G T A G C A T C G A T C G T A C G T A G A C T C G A T C T G A

PROP1/MA0715.1/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TTTCTTAATCTATTT-
-----TAATTTAATTA
 G C A T G C A T A C G T A T G C G C A T C G A T G C T A C G T A C G A T G A T C G C A T G T C A A C G T C G A T G C A T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTCTTAATCTATTT
ANTCCTTTGTCTNNNN
 A C G T G C A T G C A T A C G T A T G C G C A T C G A T G C T A C G T A C G A T G A T C G C A T G T C A A C G T C G A T G C A T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TTTCTTAATCTATTT-
-----TAATTTAATTA
 G C A T G C A T A C G T A T G C G C A T C G A T G C T A C G T A C G A T G A T C G C A T G T C A A C G T C G A T G C A T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

PB0135.1_Hoxa3_2/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTTCTTAATCTATTT-
--CCTTAATNGNTTTT
 G C A T G C A T A C G T A T G C G C A T C G A T G C T A C G T A C G A T G A T C G C A T G T C A A C G T C G A T G C A T A C G T
A C G T A C G T A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

PB0129.1_Glis2_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTCTTAATCTATTT
TCTTTANTAATANN---
 A C G T A C G T G C A T G C A T A C G T A T G C G C A T C G A T G C T A C G T A C G A T G A T C G C A T G T C A A C G T C G A T G C A T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T A C G T A C G T A C G T

PAX3/MA0780.1/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TTTCTTAATCTATTT
-----TAATCGATTA
 G C A T G C A T A C G T A T G C G C A T C G A T G C T A C G T A C G A T G A T C G C A T G T C A A C G T C G A T G C A T
A C G T A C G T A C G T A C G T A C G T C G A T C T G A T C G A G A C T A G T C T C A G T C G A C A G T A G C T G C T A

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTTCTTAATCTATTT
NNTTTTTCTTATNT-----
 A C G T A C G T A C G T A C G T G C A T G C A T A C G T A T G C G C A T C G A T G C T A C G T A C G A T G A T C G C A T G T C A A C G T C G A T G C A T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T A C G T A C G T A C G T A C G T

PAX7/MA0680.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TTTCTTAATCTATTT
-----TAATCGATTA
 G C A T G C A T A C G T A T G C G C A T C G A T G C T A C G T A C G A T G A T C G C A T G T C A A C G T C G A T G C A T
A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A

Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TTTCTTAATCTATTT--
-----TAATTNAATTAA
 G C A T G C A T A C G T A T G C G C A T C G A T G C T A C G T A C G A T G A T C G C A T G T C A A C G T C G A T G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G C T A C G T C T G A C G T A A C G T A C G T C G T A G C T A