Information for 24-GTAAGACG (Motif 59)

A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C
p-value:1e-21
log p-value:-5.057e+01
Information Content per bp:1.530
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif4.41%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif1.56%
Average Position of motif in Targets100.6 +/- 55.2bp
Average Position of motif in Background97.5 +/- 48.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROX1/MA0794.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GTAAGACG-----
-CAAGACGCCTTA
 A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTAAGACG
CAGGTAAGTAT
 A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C T G
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

PB0108.1_Atf1_2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTAAGACG------
GAATGACGAATAAC
 A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTAAGACG
AGGTGHCAGACA
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Atf1/MA0604.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTAAGACG--
--ATGACGTA
 A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C T G A C G T A C G T
A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

PB0106.1_Arid5a_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTAAGACG------
CATACAATACGAAATAA
 A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTAAGACG---
-CCAGACRSVB
 A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0187.1_Tcf7_2/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GTAAGACG-
NNNTTTNTAATACNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C T G A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GTAAGACG-
AGGTGNCAGACAG
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C T G A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTAAGACG-
-CCAGACAG
 A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C T G A C G T
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G