Information for 24-GAAATTATAAAATTT (Motif 73)

C T A G C T G A G C T A G C T A C G A T C G A T C G T A G C A T C G T A G C T A G C T A G C T A C A G T A G C T G C A T
Reverse Opposite:
C G T A T C G A G T C A C G A T C G A T C G A T G C A T C G T A G C A T G C T A G C T A C G A T C G A T A G C T G A T C
p-value:1e-9
log p-value:-2.147e+01
Information Content per bp:1.727
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets118.0 +/- 53.2bp
Average Position of motif in Background126.7 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GAAATTATAAAATTT-
HWWNNTAATTRGCHAATTAN
 A C G T A C G T A C G T A C G T C T A G C T G A G C T A G C T A C G A T C G A T C G T A G C A T C G T A G C T A G C T A G C T A C A G T A G C T G C A T A C G T
G C A T C G A T C G A T C A G T G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A C G A T A G C T C T G A C T A G

PHOX2B/MA0681.2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAAATTATAAAATTT---
--TTTAATCAAATTATAT
 C T A G C T G A G C T A G C T A C G A T C G A T C G T A G C A T C G T A G C T A G C T A G C T A C A G T A G C T G C A T A C G T A C G T A C G T
A C G T A C G T C G A T G C A T G C A T C G T A C G T A G C A T G A T C G C T A G C T A C G T A C G A T G C A T C G T A C G A T G C T A G C A T

NFIL3/MA0025.2/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAAATTATAAAATTT
--TATTATGCAATAT
 C T A G C T G A G C T A G C T A C G A T C G A T C G T A G C A T C G T A G C T A G C T A G C T A C A G T A G C T G C A T
A C G T A C G T C G A T T C G A G C A T C A G T C T G A G A C T C T A G G A T C G T C A C G T A A G C T G T C A G C A T

PB0079.1_Sry_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAAATTATAAAATTT
TATAATTATAATATTC
 A C G T C T A G C T G A G C T A G C T A C G A T C G A T C G T A G C A T C G T A G C T A G C T A G C T A C A G T A G C T G C A T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PH0063.1_Hoxb8/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GAAATTATAAAATTT
ACCGGCAATTAATAAA---
 A C G T A C G T A C G T A C G T C T A G C T G A G C T A G C T A C G A T C G A T C G T A G C A T C G T A G C T A G C T A G C T A C A G T A G C T G C A T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAATTATAAAATTT-
AGAGCCATAAAATTCG
 C T A G C T G A G C T A G C T A C G A T C G A T C G T A G C A T C G T A G C T A G C T A G C T A C A G T A G C T G C A T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GAAATTATAAAATTT
---RTTATGYAAB--
 C T A G C T G A G C T A G C T A C G A T C G A T C G T A G C A T C G T A G C T A G C T A G C T A C A G T A G C T G C A T
A C G T A C G T A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAAATTATAAAATTT
GCTAATTATAATTATC
 A C G T C T A G C T G A G C T A G C T A C G A T C G A T C G T A G C A T C G T A G C T A G C T A G C T A C A G T A G C T G C A T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

Lhx3/MA0135.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAAATTATAAAATTT
--GATTAATTAATTT
 C T A G C T G A G C T A G C T A C G A T C G A T C G T A G C A T C G T A G C T A G C T A G C T A C A G T A G C T G C A T
A C G T A C G T T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T

Hmx3/MA0898.1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GAAATTATAAAATTT
ACAAGCAATTAAAGAAT--
 A C G T A C G T A C G T A C G T C T A G C T G A G C T A G C T A C G A T C G A T C G T A G C A T C G T A G C T A G C T A G C T A C A G T A G C T G C A T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T A C G T A C G T