Information for 22-AAAGCG (Motif 74)

C G T A C G T A C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A C G T A C G T
p-value:1e-8
log p-value:-1.860e+01
Information Content per bp:1.530
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif1.41%
Average Position of motif in Targets92.6 +/- 59.4bp
Average Position of motif in Background132.6 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AAAGCG
-CAGCC
 C G T A C G T A C G T A A C T G A G T C A C T G
A C G T T A G C C G T A A C T G A G T C A T G C

IRF7/MA0772.1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAAGCG-----
ACGAAAGCGAAAGT
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

SOX10/MA0442.2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AAAGCG
AAAACAAAGAA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A G T C A C T G
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

IRF2/MA0051.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAAGCG----------
GGAAAGCGAAACCAAAAC
 A C G T A C G T C G T A C G T A C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

TCF7/MA0769.2/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----AAAGCG
ANATCAAAGNN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A G T C A C T G
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AAAGCG---
-AACCGANA
 C G T A C G T A C G T A A C T G A G T C A C T G A C G T A C G T A C G T
A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AAAGCG
ACATCAAAGG-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A G T C A C T G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AAAGCG
ASATCAAAGG-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A G T C A C T G
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AAAGCG
ACTGAAACCA
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A G T C A C T G
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

Rhox11/MA0629.1/Jaspar

Match Rank:10
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------AAAGCG----
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T