Homer Known Motif Enrichment Results (/data/Blizard-MarinoLab/Nicola_Pomella/Motifs_Sara/JamesAnalysis_Size_200_Motifs_6to50/)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 2308, Total Background Sequences = 357
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File SVG
1 T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer1e-22-5.128e+010.000045.01.95%1.00.28%motif file (matrix) svg
2 T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer1e-20-4.824e+010.0000100.04.33%5.91.67%motif file (matrix) svg
3 T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer1e-18-4.363e+010.000041.01.77%2.00.56%motif file (matrix) svg
4 T G A C G T A C C G T A A C T G T G A C C G A T A C T G A T C G A G C T T A C G T C G A T A G C G T A C C G T A A T C G T G A C G C A T A C T G A C T G A T G C Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer1e-18-4.363e+010.000041.01.77%0.90.25%motif file (matrix) svg
5 T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer1e-13-3.160e+010.000049.02.12%2.30.65%motif file (matrix) svg
6 A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer1e-12-2.790e+010.000032.01.38%1.40.39%motif file (matrix) svg
7 T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer1e-11-2.629e+010.000031.01.34%0.90.27%motif file (matrix) svg
8 A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer1e-11-2.621e+010.000057.02.47%3.61.01%motif file (matrix) svg
9 G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer1e-10-2.531e+010.0000831.035.96%104.429.55%motif file (matrix) svg
10 G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer1e-10-2.473e+010.000097.04.20%7.92.23%motif file (matrix) svg
11 T G A C C T A G A C T G T A G C C G A T A C T G A T G C C A T G A T C G A T C G A T C G T A G C C T G A T A G C G C T A A C T G C G T A A G C T C G T A C T G A GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer1e-10-2.318e+010.000029.01.25%1.20.33%motif file (matrix) svg
12 A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer1e-9-2.128e+010.0000196.08.48%19.55.53%motif file (matrix) svg
13 C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer1e-9-2.094e+010.000052.02.25%3.40.95%motif file (matrix) svg
14 G A C T A G T C C G A T A C T G C T G A T G A C G T A C C G T A A T C G G C A T C T G A C T A G Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer1e-8-2.046e+010.0000153.06.62%14.34.04%motif file (matrix) svg
15 A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer1e-8-2.030e+010.000040.01.73%2.50.71%motif file (matrix) svg
16 C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-8-2.020e+010.000027.01.17%0.70.21%motif file (matrix) svg
17 T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer1e-8-2.020e+010.000027.01.17%1.10.32%motif file (matrix) svg
18 C T A G A C T G T G C A A G T C C G T A A C T G A C T G A C G T C T A G C G A T T A C G A G T C ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer1e-7-1.799e+010.0000252.010.90%27.07.65%motif file (matrix) svg
19 T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-7-1.614e+010.000047.02.03%3.20.91%motif file (matrix) svg
20 T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer1e-6-1.606e+010.0000285.012.33%32.19.07%motif file (matrix) svg
21 C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer1e-6-1.410e+010.000073.03.16%6.41.82%motif file (matrix) svg
22 T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer1e-5-1.281e+010.0001442.019.13%55.915.81%motif file (matrix) svg
23 T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer1e-5-1.193e+010.000132.01.38%2.70.76%motif file (matrix) svg
24 T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer1e-5-1.186e+010.0001338.014.63%41.711.80%motif file (matrix) svg
25 T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer1e-4-1.098e+010.000320.00.87%2.00.56%motif file (matrix) svg
26 T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer1e-4-1.035e+010.0005797.034.49%108.130.58%motif file (matrix) svg
27 A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer1e-4-1.031e+010.0005100.04.33%10.32.91%motif file (matrix) svg
28 A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-4-1.006e+010.0007577.024.97%76.221.57%motif file (matrix) svg
29 T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer1e-4-9.982e+000.000783.03.59%8.22.33%motif file (matrix) svg
30 A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer1e-4-9.936e+000.0007123.05.32%13.33.78%motif file (matrix) svg
31 C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-4-9.832e+000.000819.00.82%0.00.00%motif file (matrix) svg
32 G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer1e-4-9.729e+000.0008401.017.35%51.814.67%motif file (matrix) svg
33 G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer1e-4-9.675e+000.0008272.011.77%33.99.58%motif file (matrix) svg
34 G A T C G C T A C A G T A C G T T A C G A G T C A T G C C T A G A G T C T C G A Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer1e-4-9.615e+000.000957.02.47%5.21.47%motif file (matrix) svg
35 C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer1e-4-9.572e+000.000939.01.69%3.40.96%motif file (matrix) svg
36 A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer1e-4-9.407e+000.001098.04.24%10.93.07%motif file (matrix) svg
37 C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer1e-3-9.036e+000.0014159.06.88%18.15.13%motif file (matrix) svg
38 T G A C G T C A A G T C G C T A C T A G A G T C C T G A C A T G A C T G C T A G T A C G T C A G Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer1e-3-9.005e+000.0014105.04.54%11.73.30%motif file (matrix) svg
39 C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer1e-3-8.856e+000.001638.01.64%3.71.03%motif file (matrix) svg
40 T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer1e-3-8.854e+000.001647.02.03%4.91.39%motif file (matrix) svg
41 C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer1e-3-8.762e+000.001764.02.77%6.21.77%motif file (matrix) svg
42 T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer1e-3-8.738e+000.001718.00.78%1.30.37%motif file (matrix) svg
43 C G T A C G T A C G T A A G T C A G C T C T G A A C T G A C T G A G C T A G T C C G T A C T A G C T A G C T A G T G C A RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer1e-3-8.738e+000.001718.00.78%1.40.40%motif file (matrix) svg
44 T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer1e-3-8.738e+000.001718.00.78%0.80.21%motif file (matrix) svg
45 C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-3-8.576e+000.0018318.013.76%40.711.51%motif file (matrix) svg
46 C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer1e-3-7.962e+000.0033511.022.11%68.519.40%motif file (matrix) svg
47 T G C A T C G A T C G A A C G T C A T G C G T A A G T C T C A G A C G T G T A C C G T A A G C T CREB5(bZIP)/LNCaP-CREB5.V5-ChIP-Seq(GSE137775)/Homer1e-3-7.737e+000.004162.02.68%6.91.95%motif file (matrix) svg
48 A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-3-7.695e+000.004117.00.74%0.70.20%motif file (matrix) svg
49 G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer1e-3-7.695e+000.004117.00.74%1.40.40%motif file (matrix) svg
50 G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer1e-3-7.695e+000.004117.00.74%1.40.40%motif file (matrix) svg
51 T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer1e-3-7.641e+000.004145.01.95%4.81.35%motif file (matrix) svg
52 A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer1e-3-7.585e+000.0043356.015.40%46.113.05%motif file (matrix) svg
53 C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer1e-3-7.497e+000.004636.01.56%3.51.00%motif file (matrix) svg
54 T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer1e-3-7.391e+000.0050263.011.38%33.49.45%motif file (matrix) svg
55 G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-3-7.375e+000.0050227.09.82%28.68.08%motif file (matrix) svg
56 C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer1e-3-7.066e+000.006644.01.90%4.51.26%motif file (matrix) svg
57 T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer1e-3-7.066e+000.006644.01.90%4.51.26%motif file (matrix) svg
58 A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer1e-2-6.857e+000.007835.01.51%3.91.12%motif file (matrix) svg
59 T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer1e-2-6.857e+000.007835.01.51%3.71.05%motif file (matrix) svg
60 A G T C G A C T A C T G G A T C G T A C C G T A T G A C A G T C C G A T A G C T A C G T A C G T C T A G G A C T C T G A ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer1e-2-6.475e+000.0113106.04.59%12.73.58%motif file (matrix) svg
61 C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer1e-2-6.281e+000.0133172.07.44%21.15.98%motif file (matrix) svg
62 C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer1e-2-6.281e+000.0133172.07.44%21.36.04%motif file (matrix) svg
63 A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer1e-2-6.278e+000.0133556.024.06%76.221.57%motif file (matrix) svg
64 T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer1e-2-6.156e+000.014625.01.08%2.60.73%motif file (matrix) svg
65 T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer1e-2-5.774e+000.020415.00.65%0.90.27%motif file (matrix) svg
66 T G A C T C G A C T G A C T G A A T G C G A T C C T A G T A C G G A C T G A C T G A T C T C G A C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer1e-2-5.774e+000.020415.00.65%0.00.00%motif file (matrix) svg
67 C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer1e-2-5.774e+000.020415.00.65%0.00.00%motif file (matrix) svg
68 A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer1e-2-5.637e+000.0231545.023.58%75.421.33%motif file (matrix) svg
69 C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer1e-2-5.626e+000.0231415.017.96%56.716.04%motif file (matrix) svg
70 G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer1e-2-5.469e+000.026524.01.04%2.90.81%motif file (matrix) svg
71 A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer1e-2-5.437e+000.0270496.021.46%68.919.49%motif file (matrix) svg
72 C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer1e-2-5.200e+000.0337182.07.88%23.26.57%motif file (matrix) svg
73 C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-2-5.135e+000.0355877.037.95%125.035.38%motif file (matrix) svg
74 A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer1e-2-5.006e+000.0398459.019.86%63.918.09%motif file (matrix) svg
75 C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer1e-2-4.925e+000.0426195.08.44%26.07.35%motif file (matrix) svg
76 C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer1e-2-4.901e+000.042614.00.61%1.80.51%motif file (matrix) svg
77 C G T A C G T A C G T A A G T C A G C T C T G A A C T G C T A G A G C T A G T C C G T A T C A G RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer1e-2-4.901e+000.042614.00.61%1.40.40%motif file (matrix) svg