Information for 6-ATATAATACAAT (Motif 11)

C G T A A C G T C T G A A C G T C G T A C G T A A C G T C G T A G T A C C G T A C T G A A C G T
Reverse Opposite:
C G T A A G C T C G A T A C T G C G A T C G T A C G A T A C G T C G T A A G C T T G C A C G A T
p-value:1e-16
log p-value:-3.724e+01
Information Content per bp:1.818
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets95.0 +/- 59.4bp
Average Position of motif in Background114.6 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATATAATACAAT----
AATGCAATAAAATTTAT
 A C G T C G T A A C G T C T G A A C G T C G T A C G T A A C G T C G T A G T A C C G T A C T G A A C G T A C G T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATATAATACAAT----
AATCAATTCAATAATT
 C G T A A C G T C T G A A C G T C G T A C G T A A C G T C G T A G T A C C G T A C T G A A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATATAATACAAT---
TAGGTAATAAAATTCA
 A C G T C G T A A C G T C T G A A C G T C G T A C G T A A C G T C G T A G T A C C G T A C T G A A C G T A C G T A C G T A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATATAATACAAT---
---TAATTNAATTAA
 C G T A A C G T C T G A A C G T C G T A C G T A A C G T C G T A G T A C C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G C T A C G T C T G A C G T A A C G T A C G T C G T A G C T A

PB0079.1_Sry_1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATATAATACAAT----
NANTATTATAATTNNN
 C G T A A C G T C T G A A C G T C G T A C G T A A C G T C G T A G T A C C G T A C T G A A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PROP1/MA0715.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ATATAATACAAT--
---TAATTTAATTA
 C G T A A C G T C T G A A C G T C G T A C G T A A C G T C G T A G T A C C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A

CEBPG(var.2)/MA1636.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATATAATACAAT---
AAATGATGCAATCAT
 C G T A A C G T C T G A A C G T C G T A C G T A A C G T C G T A G T A C C G T A C T G A A C G T A C G T A C G T A C G T
C G T A C G T A T C G A C G A T C A T G C T G A G A C T C T A G G T A C G T C A C G T A A G C T G T A C G C T A G A C T

PB0187.1_Tcf7_2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATATAATACAAT
NNNTTTNTAATACNG-
 A C G T A C G T A C G T A C G T C G T A A C G T C T G A A C G T C G T A C G T A A C G T C G T A G T A C C G T A C T G A A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ATATAATACAAT--
---TAATTTAATTA
 C G T A A C G T C T G A A C G T C G T A C G T A A C G T C G T A G T A C C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ATATAATACAAT---
---TAATTNVATTAN
 C G T A A C G T C T G A A C G T C G T A C G T A A C G T C G T A G T A C C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G