Information for 7-AAAGTTAGATTC (Motif 12)

C G T A T G C A C G T A C A T G G A C T A C G T C G T A T A C G T G C A G A C T C G A T G T A C
Reverse Opposite:
C A T G G C T A C G T A A C G T A T G C G C A T G T C A C T G A G T A C G C A T A C G T C G A T
p-value:1e-15
log p-value:-3.581e+01
Information Content per bp:1.729
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets99.9 +/- 54.0bp
Average Position of motif in Background68.8 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PHOX2B/MA0681.2/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAAGTTAGATTC--
NNATAATTTGATTANN
 A C G T A C G T C G T A T G C A C G T A C A T G G A C T A C G T C G T A T A C G T G C A G A C T C G A T G T A C A C G T A C G T
C G T A C G A T G C T A G C A T C G T A G C T A G C A T C G A T C G A T C T A G C G T A G C A T G C A T C G T A C G T A G C T A

DMRTA2/MA1478.1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAGTTAGATTC
AATTGTTACATT-
 A C G T C G T A T G C A C G T A C A T G G A C T A C G T C G T A T A C G T G C A G A C T C G A T G T A C
G C T A C G T A G C A T A G C T A C T G G C A T G C A T C T G A A G T C C G T A C G A T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAGTTAGATTC
GAAAGTGAAAGT-
 A C G T C G T A T G C A C G T A C A T G G A C T A C G T C G T A T A C G T G C A G A C T C G A T G T A C
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAAGTTAGATTC
GAATGTTTGTTT-
 A C G T C G T A T G C A C G T A C A T G G A C T A C G T C G T A T A C G T G C A G A C T C G A T G T A C
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAAGTTAGATTC
AAAAGTCAA----
 A C G T C G T A T G C A C G T A C A T G G A C T A C G T C G T A T A C G T G C A G A C T C G A T G T A C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTTAGATTC
GAAACTGAAACT-
 A C G T C G T A T G C A C G T A C A T G G A C T A C G T C G T A T A C G T G C A G A C T C G A T G T A C
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTTAGATTC
GAAAGTGAAAGT-
 A C G T C G T A T G C A C G T A C A T G G A C T A C G T C G T A T A C G T G C A G A C T C G A T G T A C
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AAAGTTAGATTC
ACGAAAGCGAAAGT-
 A C G T A C G T A C G T C G T A T G C A C G T A C A T G G A C T A C G T C G T A T A C G T G C A G A C T C G A T G T A C
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T A C G T

ZNF652/MA1657.1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AAAGTTAGATTC
GAAAGAGTTAAA---
 A C G T A C G T A C G T C G T A T G C A C G T A C A T G G A C T A C G T C G T A T A C G T G C A G A C T C G A T G T A C
A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A A C G T A C G T A C G T

PROP1/MA0715.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AAAGTTAGATTC
-TAATTAAATTA
 C G T A T G C A C G T A C A T G G A C T A C G T C G T A T A C G T G C A G A C T C G A T G T A C
A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A