Information for 11-AGAAAGATTTCA (Motif 17)

C T G A A C T G T C G A G T C A C G T A C T A G T C G A G C A T G A C T G A C T T G A C G C T A
Reverse Opposite:
C G A T A C T G C T G A C T G A C G T A A G C T G A T C C G A T A C G T A G C T T G A C G A C T
p-value:1e-14
log p-value:-3.333e+01
Information Content per bp:1.681
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets83.3 +/- 43.8bp
Average Position of motif in Background112.9 +/- 59.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGAAAGATTTCA----
GACAGAGATATCAGTGT
 A C G T C T G A A C T G T C G A G T C A C G T A C T A G T C G A G C A T G A C T G A C T T G A C G C T A A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGAAAGATTTCA---
GAAAAAATTGCAAGG
 C T G A A C T G T C G A G T C A C G T A C T A G T C G A G C A T G A C T G A C T T G A C G C T A A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

ZNF652/MA1657.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGAAAGATTTCA-
-GAAAGAGTTAAA
 C T G A A C T G T C G A G T C A C G T A C T A G T C G A G C A T G A C T G A C T T G A C G C T A A C G T
A C G T A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGAAAGATTTCA----
TNNNATGATTTCNNCNN
 A C G T C T G A A C T G T C G A G T C A C G T A C T A G T C G A G C A T G A C T G A C T T G A C G C T A A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

PRDM1/MA0508.3/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGAAAGATTTCA
NAGAGAAAGNA----
 A C G T A C G T A C G T C T G A A C T G T C G A G T C A C G T A C T A G T C G A G C A T G A C T G A C T T G A C G C T A
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAAAGATTTCA
ACAAAGGNBCCT
 C T G A A C T G T C G A G T C A C G T A C T A G T C G A G C A T G A C T G A C T T G A C G C T A
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGAAAGATTTCA
AAACAAACATTC--
 A C G T A C G T C T G A A C T G T C G A G T C A C G T A C T A G T C G A G C A T G A C T G A C T T G A C G C T A
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGAAAGATTTCA
AAAACAAAGAA----
 A C G T A C G T A C G T C T G A A C T G T C G A G T C A C G T A C T A G T C G A G C A T G A C T G A C T T G A C G C T A
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGAAAGATTTCA
AATAAACAATN--
 A C G T C T G A A C T G T C G A G T C A C G T A C T A G T C G A G C A T G A C T G A C T T G A C G C T A
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGAAAGATTTCA---
ATAAACAATTAAACA
 C T G A A C T G T C G A G T C A C G T A C T A G T C G A G C A T G A C T G A C T T G A C G C T A A C G T A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A