Information for 12-TAGAAGTAAATA (Motif 18)

A C G T C G T A C T A G C G T A C T G A A T C G C G A T G T C A C G T A C G T A C G A T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T A C G T G C T A A T G C A G C T A C G T A G T C A C G T G T C A
p-value:1e-14
log p-value:-3.333e+01
Information Content per bp:1.863
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets106.8 +/- 39.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0015.1_Foxa2_1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TAGAAGTAAATA-----
AAAAAGTAAACAAAGAC
 A C G T C G T A C T A G C G T A C T G A A T C G C G A T G T C A C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TAGAAGTAAATA
--WAAGTAAAYA
 A C G T C G T A C T A G C G T A C T G A A T C G C G A T G T C A C G T A C G T A C G A T C G T A
A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TAGAAGTAAATA
--AAAGTAAACA
 A C G T C G T A C T A G C G T A C T G A A T C G C G A T G T C A C G T A C G T A C G A T C G T A
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TAGAAGTAAATA-
--TATGTAAATAT
 A C G T C G T A C T A G C G T A C T G A A T C G C G A T G T C A C G T A C G T A C G A T C G T A A C G T
A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TAGAAGTAAATA-
--TATGTAAATAT
 A C G T C G T A C T A G C G T A C T G A A T C G C G A T G T C A C G T A C G T A C G A T C G T A A C G T
A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TAGAAGTAAATA
---AAATAAACA
 A C G T C G T A C T A G C G T A C T G A A T C G C G A T G T C A C G T A C G T A C G A T C G T A
A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXA2/MA0047.3/Jaspar

Match Rank:7
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TAGAAGTAAATA--
---ATGTAAACATA
 A C G T C G T A C T A G C G T A C T G A A T C G C G A T G T C A C G T A C G T A C G A T C G T A A C G T A C G T
A C G T A C G T A C G T C T G A C G A T C T A G G C A T G T C A G T C A G C T A A G T C G C T A G C A T C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TAGAAGTAAATA
--AAAGTAAACA
 A C G T C G T A C T A G C G T A C T G A A T C G C G A T G T C A C G T A C G T A C G A T C G T A
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA3/MA1683.1/Jaspar

Match Rank:9
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TAGAAGTAAATA--
---ATGTAAACATA
 A C G T C G T A C T A G C G T A C T G A A T C G C G A T G T C A C G T A C G T A C G A T C G T A A C G T A C G T
A C G T A C G T A C G T C T G A C G A T C T A G G A C T G T C A G T C A G C T A A G T C G C T A C G A T C G T A

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TAGAAGTAAATA--
--TAAGTAAACAAA
 A C G T C G T A C T A G C G T A C T G A A T C G C G A T G T C A C G T A C G T A C G A T C G T A A C G T A C G T
A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A