Information for 2-TCTTTAATATTT (Motif 2)

A G C T G T A C C A G T A G C T A C G T C G T A C G T A C A G T G T C A C G A T C G A T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T G C T A A C G T A C G T G T C A C T G A G C T A A C T G C T G A
p-value:1e-23
log p-value:-5.363e+01
Information Content per bp:1.862
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets113.6 +/- 52.7bp
Average Position of motif in Background105.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TCTTTAATATTT
NNTTTTTCTTATNT
 A C G T A C G T A G C T G T A C C A G T A G C T A C G T C G T A C G T A C A G T G T C A C G A T C G A T A C G T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

TCF7L1/MA1421.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCTTTAATATTT
CCTTTGATCTTT
 A G C T G T A C C A G T A G C T A C G T C G T A C G T A C A G T G T C A C G A T C G A T A C G T
A G T C T A G C A G C T A C G T A C G T A C T G T G C A G C A T T A G C C G A T A G C T C G A T

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TCTTTAATATTT-----
---CTAATATTGCTAAA
 A G C T G T A C C A G T A G C T A C G T C G T A C G T A C A G T G T C A C G A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TCTTTAATATTT-----
---CTAATATTGCTAAA
 A G C T G T A C C A G T A G C T A C G T C G T A C G T A C A G T G T C A C G A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TCTTTAATATTT----
---TTAATGTTTAACC
 A G C T G T A C C A G T A G C T A C G T C G T A C G T A C A G T G T C A C G A T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

PH0150.1_Pou4f3/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TCTTTAATATTT
GACNTCATTAATAANN
 A C G T A C G T A C G T A C G T A G C T G T A C C A G T A G C T A C G T C G T A C G T A C A G T G T C A C G A T C G A T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

Arid3a/MA0151.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TCTTTAATATTT
--TTTAAT----
 A G C T G T A C C A G T A G C T A C G T C G T A C G T A C A G T G T C A C G A T C G A T A C G T
A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TCTTTAATATTT
AACCCTTTGATCTTT
 A C G T A C G T A C G T A G C T G T A C C A G T A G C T A C G T C G T A C G T A C A G T G T C A C G A T C G A T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

PB0129.1_Glis2_2/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCTTTAATATTT--
TCTTTANTAATANN
 A G C T G T A C C A G T A G C T A C G T C G T A C G T A C A G T G T C A C G A T C G A T A C G T A C G T A C G T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

Arid3b/MA0601.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCTTTAATATTT
NTAATTAATAT--
 A C G T A G C T G T A C C A G T A G C T A C G T C G T A C G T A C A G T G T C A C G A T C G A T A C G T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T