Information for 1-CGCGSKSGCCMWGGCGYSCG (Motif 20)

T A G C A T C G A T G C T A C G A T G C A C T G A T C G T A C G A G T C A G T C G T A C C G A T A T C G A T C G A G T C A T C G A G C T A T C G A T G C A C T G
Reverse Opposite:
A G T C T A C G A T G C T C G A A T G C C T A G A T G C A T G C C G T A C A T G A C T G T A C G A T G C T A G C T G A C T A C G A G T C A T C G A T G C A T C G
p-value:1e-14
log p-value:-3.333e+01
Information Content per bp:1.652
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets92.3 +/- 50.2bp
Average Position of motif in Background80.6 +/- 0.5bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.64
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.60
Offset:12
Orientation:reverse strand
Alignment:CGCGSKSGCCMWGGCGYSCG
------------GGCGCGCT
 T A G C A T C G A T G C T A C G A T G C A C T G A T C G T A C G A G T C A G T C G T A C C G A T A T C G A T C G A G T C A T C G A G C T A T C G A T G C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CGCGSKSGCCMWGGCGYSCG--
-------ATAAAGGCGCGCGAT
 T A G C A T C G A T G C T A C G A T G C A C T G A T C G T A C G A G T C A G T C G T A C C G A T A T C G A T C G A G T C A T C G A G C T A T C G A T G C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CGCGSKSGCCMWGGCGYSCG--
-------ATAAGGGCGCGCGAT
 T A G C A T C G A T G C T A C G A T G C A C T G A T C G T A C G A G T C A G T C G T A C C G A T A T C G A T C G A G T C A T C G A G C T A T C G A T G C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.52
Offset:11
Orientation:forward strand
Alignment:CGCGSKSGCCMWGGCGYSCG-------
-----------TGGCGCGCGCGCCTGA
 T A G C A T C G A T G C T A C G A T G C A C T G A T C G T A C G A G T C A G T C G T A C C G A T A T C G A T C G A G T C A T C G A G C T A T C G A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CGCGSKSGCCMWGGCGYSCG
----GGGGCCGAGGCCTG--
 T A G C A T C G A T G C T A C G A T G C A C T G A T C G T A C G A G T C A G T C G T A C C G A T A T C G A T C G A G T C A T C G A G C T A T C G A T G C A C T G
A C G T A C G T A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:6
Score:0.50
Offset:11
Orientation:forward strand
Alignment:CGCGSKSGCCMWGGCGYSCG---
-----------CAACGTCCGCGG
 T A G C A T C G A T G C T A C G A T G C A C T G A T C G T A C G A G T C A G T C G T A C C G A T A T C G A T C G A G T C A T C G A G C T A T C G A T G C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

TCFL5/MA0632.2/Jaspar

Match Rank:7
Score:0.49
Offset:11
Orientation:reverse strand
Alignment:CGCGSKSGCCMWGGCGYSCG-
-----------GTGCGCGTGA
 T A G C A T C G A T G C T A C G A T G C A C T G A T C G T A C G A G T C A G T C G T A C C G A T A T C G A T C G A G T C A T C G A G C T A T C G A T G C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C A G T A T C G A G T C C T A G A G T C C T A G G A C T A C T G T G C A

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:8
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CGCGSKSGCCMWGGCGYSCG
----GTTGCCATGGCAACCG
 T A G C A T C G A T G C T A C G A T G C A C T G A T C G T A C G A G T C A G T C G T A C C G A T A T C G A T C G A G T C A T C G A G C T A T C G A T G C A C T G
A C G T A C G T A C G T A C G T C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.48
Offset:11
Orientation:forward strand
Alignment:CGCGSKSGCCMWGGCGYSCG-
-----------TWVGGTCCGC
 T A G C A T C G A T G C T A C G A T G C A C T G A T C G T A C G A G T C A G T C G T A C C G A T A T C G A T C G A G T C A T C G A G C T A T C G A T G C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.47
Offset:5
Orientation:reverse strand
Alignment:CGCGSKSGCCMWGGCGYSCG
-----ATGCCCGGGCATGT-
 T A G C A T C G A T G C T A C G A T G C A C T G A T C G T A C G A G T C A G T C G T A C C G A T A T C G A T C G A G T C A T C G A G C T A T C G A T G C A C T G
A C G T A C G T A C G T A C G T A C G T G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T