Information for 4-CTGAAATTTG (Motif 23)

A G T C C A G T A C T G C G T A C G T A C G T A C G A T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A A C G T C G A T A C G T A G T C G C T A A C T G
p-value:1e-13
log p-value:-3.117e+01
Information Content per bp:1.909
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets105.7 +/- 39.8bp
Average Position of motif in Background114.2 +/- 36.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CTGAAATTTG-
TTGAATGAAATTCGA
 A C G T A C G T A C G T A C G T A G T C C A G T A C T G C G T A C G T A C G T A C G A T A C G T A C G T A C T G A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

HNF4A/MA0114.4/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTGAAATTTG--
NNTGGACTTTGNN
 A C G T A G T C C A G T A C T G C G T A C G T A C G T A C G A T A C G T A C G T A C T G A C G T A C G T
G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A

HNF4G/MA0484.2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTGAAATTTG--
NNTGGACTTTGNN
 A C G T A G T C C A G T A C T G C G T A C G T A C G T A C G A T A C G T A C G T A C T G A C G T A C G T
G A C T A G T C G C A T C T A G C T A G G T C A T G A C G A C T A G C T A G C T C T A G T C A G G T C A

TEAD1/MA0090.3/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTGAAATTTG-
NNCTGGAATGTNN
 A C G T A C G T A G T C C A G T A C T G C G T A C G T A C G T A C G A T A C G T A C G T A C T G A C G T
A C T G A T G C G A T C G C A T C T A G C A T G G C T A T C G A G A C T A C T G G A C T C T A G C T A G

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTGAAATTTG
TGCTGTGATTT-
 A C G T A C G T A G T C C A G T A C T G C G T A C G T A C G T A C G A T A C G T A C G T A C T G
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTGAAATTTG------
-TGWAAYCTGABACCB
 A G T C C A G T A C T G C G T A C G T A C G T A C G A T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A C T G C G T A G T C A C G T A A G C T G A T C A G C T A C T G C G T A A G T C G T C A A G T C A G T C A T C G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTGAAATTTG-------
-TGGACTTTGNNCTNTG
 A G T C C A G T A C T G C G T A C G T A C G T A C G A T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

SIX2/MA1119.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTGAAATTTG----
AACTGAAACCTGATAC
 A C G T A C G T A G T C C A G T A C T G C G T A C G T A C G T A C G A T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
G C T A G C T A T G A C C G A T C A T G G C T A G T C A C T G A G A T C G T A C G C A T C T A G C G T A A C G T G T C A G A T C

TEAD4/MA0809.2/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTGAAATTTG-
NCTGGAATGTNN
 A C G T A G T C C A G T A C T G C G T A C G T A C G T A C G A T A C G T A C G T A C T G A C G T
A T G C G A T C C G A T C T A G T C A G G C T A T C G A C G A T A C T G G A C T C T A G C T A G

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTGAAATTTG----
--GWAAYHTGABMC
 A G T C C A G T A C T G C G T A C G T A C G T A C G A T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C