Information for 14-CATAAKACATRG (Motif 25)

A G T C C G T A A C G T C G T A C G T A C A G T G C T A A G T C C G T A A C G T C T A G C A T G
Reverse Opposite:
G A T C G A T C C G T A C G A T C T A G C G A T G T C A C G A T C G A T G T C A A C G T A C T G
p-value:1e-13
log p-value:-3.036e+01
Information Content per bp:1.740
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets94.0 +/- 55.0bp
Average Position of motif in Background69.9 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CATAAKACATRG
ATGCATWATGCATRW
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C A G T G C T A A G T C C G T A A C G T C T A G C A T G
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T

POU4F1/MA0790.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATAAKACATRG
ATGAATAATTAATG-
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C A G T G C T A A G T C C G T A A C G T C T A G C A T G
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATAAKACATRG-
ATGCATAATTAATGAG
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C A G T G C T A A G T C C G T A A C G T C T A G C A T G A C G T
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CATAAKACATRG
ATGAATWATTCATGA
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C A G T G C T A A G T C C G T A A C G T C T A G C A T G
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A

PBX2/MA1113.2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATAAKACATRG
GTCATAAATCATT-
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A C A G T G C T A A G T C C G T A A C G T C T A G C A T G
T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CATAAKACATRG
NNCCATAAATCATNN
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C A G T G C T A A G T C C G T A A C G T C T A G C A T G
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CATAAKACATRG-
NNAATTAGTCACGGT
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A C A G T G C T A A G T C C G T A A C G T C T A G C A T G A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CATAAKACATRG
TGAATTATGCAT--
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A C A G T G C T A A G T C C G T A A C G T C T A G C A T G
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CATAAKACATRG
GTCATCAATCATT-
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A C A G T G C T A A G T C C G T A A C G T C T A G C A T G
C T A G G A C T G A T C C T G A C A G T G T A C G T C A G C T A G C A T G T A C G C T A G C A T G C A T A C G T

POU4F2/MA0683.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CATAAKACATRG-
ATGCATAATTAATGAG
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C A G T G C T A A G T C C G T A A C G T C T A G C A T G A C G T
C T G A G A C T C T A G G T A C G C T A C G A T C G T A G C T A G C A T G C A T C T G A T C G A A C G T A C T G C T G A T C A G