Information for 15-ACATATAKCTAA (Motif 27)

C T G A G T A C G T C A G C A T G C T A C G A T C G T A C A T G A G T C G A C T C T G A G T C A
Reverse Opposite:
A C G T A G C T C T G A T C A G G T A C G C A T C G T A C G A T C G T A A C G T C A T G A G C T
p-value:1e-12
log p-value:-2.954e+01
Information Content per bp:1.745
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets107.5 +/- 51.1bp
Average Position of motif in Background86.1 +/- 53.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROG2/MA0669.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACATATAKCTAA
AACATATGTC---
 A C G T C T G A G T A C G T C A G C A T G C T A C G A T C G T A C A T G A G T C G A C T C T G A G T C A
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ACATATAKCTAA-----
ANNNCTAGTTAACNGNN
 C T G A G T A C G T C A G C A T G C T A C G A T C G T A C A T G A G T C G A C T C T G A G T C A A C G T A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PH0082.1_Irx2/Jaspar

Match Rank:3
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------ACATATAKCTAA
ANTNTTACATGTATNTA-
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T A C G T C A G C A T G C T A C G A T C G T A C A T G A G T C G A C T C T G A G T C A
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACATATAKCTAA---
-AATATTAATAAAGA
 C T G A G T A C G T C A G C A T G C T A C G A T C G T A C A T G A G T C G A C T C T G A G T C A A C G T A C G T A C G T
A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

Twist2/MA0633.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACATATAKCTAA
NACATATGGN---
 A C G T C T G A G T A C G T C A G C A T G C T A C G A T C G T A C A T G A G T C G A C T C T G A G T C A
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:6
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------ACATATAKCTAA
ANTNNTACATGTANNTN-
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T A C G T C A G C A T G C T A C G A T C G T A C A T G A G T C G A C T C T G A G T C A
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACATATAKCTAA-
CTAATATTGCTAAA
 A C G T C T G A G T A C G T C A G C A T G C T A C G A T C G T A C A T G A G T C G A C T C T G A G T C A A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACATATAKCTAA-
CTAATATTGCTAAA
 A C G T C T G A G T A C G T C A G C A T G C T A C G A T C G T A C A T G A G T C G A C T C T G A G T C A A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

NEUROG1/MA0623.2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACATATAKCTAA
GACATATGTC---
 A C G T C T G A G T A C G T C A G C A T G C T A C G A T C G T A C A T G A G T C G A C T C T G A G T C A
T C A G T G C A A G T C C T G A A G C T C T G A A G C T A T C G A C G T A G T C A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ACATATAKCTAA
GCTAAAAATAGC---
 A C G T A C G T A C G T C T G A G T A C G T C A G C A T G C T A C G A T C G T A C A T G A G T C G A C T C T G A G T C A
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T