Information for 5-GCAGGTGCAT (Motif 28)

A C T G G T A C C G T A A C T G A C T G A C G T C T A G T G A C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A G T C T G C A G T A C G T A C C G A T A C T G G T A C
p-value:1e-12
log p-value:-2.951e+01
Information Content per bp:1.804
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets81.2 +/- 53.9bp
Average Position of motif in Background71.9 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGCAT
RGCAGGTGYA-
 A C G T A C T G G T A C C G T A A C T G A C T G A C G T C T A G T G A C C G T A A C G T
T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A A C G T

SNAI3/MA1559.1/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GCAGGTGCAT
AACAGGTGCA-
 A C G T A C T G G T A C C G T A A C T G A C T G A C G T C T A G T G A C C G T A A C G T
C T G A C T G A G A T C C T G A C T A G A T C G A C G T C T A G A G T C T C G A A C G T

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:3
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GCAGGTGCAT
NNGGCAGGTGCNN
 A C G T A C G T A C G T A C T G G T A C C G T A A C T G A C T G A C G T C T A G T G A C C G T A A C G T
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G

SNAI1/MA1558.1/Jaspar

Match Rank:4
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GCAGGTGCAT
GGCAGGTGCA-
 A C G T A C T G G T A C C G T A A C T G A C T G A C G T C T A G T G A C C G T A A C G T
C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A A C G T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:5
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGTGCAT
NNGCAGGTGNN-
 A C G T A C G T A C T G G T A C C G T A A C T G A C T G A C G T C T A G T G A C C G T A A C G T
T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G A C G T

TCF4/MA0830.2/Jaspar

Match Rank:6
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GCAGGTGCAT
NNGGCAGGTGCNN
 A C G T A C G T A C G T A C T G G T A C C G T A A C T G A C T G A C G T C T A G T G A C C G T A A C G T
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G A G C T A T C G A T G C G T A C T A C G

TCF3/MA0522.3/Jaspar

Match Rank:7
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGTGCAT
NNGCAGGTGNN-
 A C G T A C G T A C T G G T A C C G T A A C T G A C T G A C G T C T A G T G A C C G T A A C G T
T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGTGCAT
SDGCAGGTGCNS
 A C G T A C G T A C T G G T A C C G T A A C T G A C T G A C G T C T A G T G A C C G T A A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

ZEB1/MA0103.3/Jaspar

Match Rank:9
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGTGCAT
NNGCAGGTGNN-
 A C G T A C G T A C T G G T A C C G T A A C T G A C T G A C G T C T A G T G A C C G T A A C G T
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGCAT
NNCAGGTGNN-
 A C G T A C T G G T A C C G T A A C T G A C T G A C G T C T A G T G A C C G T A A C G T
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T