Information for 16-TGCTTTCTTGCC (Motif 29)

A C G T C T A G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G G T A C G T A C
Reverse Opposite:
C A T G A C T G A G T C G T C A C G T A C T A G C G T A C G T A G T C A A C T G A G T C C G T A
p-value:1e-12
log p-value:-2.951e+01
Information Content per bp:1.852
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets123.6 +/- 61.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGCTTTCTTGCC
TGATTTATGGCC
 A C G T C T A G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G G T A C G T A C
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

CDX2/MA0465.2/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGCTTTCTTGCC-
-NTTTTATTGCNN
 A C G T C T A G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G G T A C G T A C A C G T
A C G T C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T

CDX4/MA1473.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGCTTTCTTGCC
-GTTTTATTGCC
 A C G T C T A G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G G T A C G T A C
A C G T T C A G C A G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G T C G T A C

CDX1/MA0878.2/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGCTTTCTTGCC
-GTTTTATGGCC
 A C G T C T A G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G G T A C G T A C
A C G T T C A G C A G T A G C T A C G T A G C T C G T A A C G T A C T G T C A G G A T C G T A C

HOXD13/MA0909.2/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGCTTTCTTGCC
-GTTTTATTGGG
 A C G T C T A G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G G T A C G T A C
A C G T A C T G A C G T A C G T A G C T A C G T C G T A A G C T A C G T A C T G A T C G A T C G

HOXD9/MA0913.2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCTTTCTTGCC
-NTTTTATTGC-
 A C G T C T A G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G G T A C G T A C
A C G T C T A G C A G T A C G T C G A T C G A T C G T A A G C T C A G T T C A G A G T C A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGCTTTCTTGCC
AAATGATTTATGGCT
 A C G T A C G T A C G T A C G T C T A G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G G T A C G T A C
C T G A C G T A C G T A C G A T C T A G C G T A C G A T C G A T C A G T T C G A A G C T C A T G C T A G A G T C G A C T

PBX2/MA1113.2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGCTTTCTTGCC
NNTGATTTATGNN-
 A C G T A C G T A C G T C T A G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G G T A C G T A C
C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C A C G T

HOXA13/MA0650.2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCTTTCTTGCC
-GTTTTATTGGN
 A C G T C T A G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G G T A C G T A C
A C G T C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGCTTTCTTGCC--
---NNACTTGCCTT
 A C G T C T A G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C T G G T A C G T A C A C G T A C G T
A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T