Information for 2-TCCCTCSRGGTGHSCCCTTC (Motif 30)

A G C T G T A C G T A C A G T C G A C T A G T C T A C G T C A G C A T G A T C G C A G T A T C G G T A C T A C G A G T C A G T C G A T C G C A T C A G T A G T C
Reverse Opposite:
C T A G G T C A C G T A C T A G A C T G T C A G A T G C C A T G A T G C G T C A T A G C G T A C A G T C A T G C T C A G C T G A T C A G C A T G C A T G C T G A
p-value:1e-12
log p-value:-2.951e+01
Information Content per bp:1.653
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets86.0 +/- 53.3bp
Average Position of motif in Background107.0 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ebf2/MA1604.1/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTCSRGGTGHSCCCTTC
NNTCCCTTGGGAN---------
 A C G T A C G T A G C T G T A C G T A C A G T C G A C T A G T C T A C G T C A G C A T G A T C G C A G T A T C G G T A C T A C G A G T C A G T C G A T C G C A T C A G T A G T C
C T G A A C T G A G C T G A T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EBF3/MA1637.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTCSRGGTGHSCCCTTC
NNTCCCTTGGGAN---------
 A C G T A C G T A G C T G T A C G T A C A G T C G A C T A G T C T A C G T C A G C A T G A T C G C A G T A T C G G T A C T A C G A G T C A G T C G A T C G C A T C A G T A G T C
C G T A A C G T A G C T A G T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TCCCTCSRGGTGHSCCCTTC
CCCCCCCGGGGGNN------
 A G C T G T A C G T A C A G T C G A C T A G T C T A C G T C A G C A T G A T C G C A G T A T C G G T A C T A C G A G T C A G T C G A T C G C A T C A G T A G T C
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTCSRGGTGHSCCCTTC
NTCCCCTCAGGGANT-------
 A C G T A C G T A G C T G T A C G T A C A G T C G A C T A G T C T A C G T C A G C A T G A T C G C A G T A T C G G T A C T A C G A G T C A G T C G A T C G C A T C A G T A G T C
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TCCCTCSRGGTGHSCCCTTC
-CTCCCTGGGAGGCCN----
 A G C T G T A C G T A C A G T C G A C T A G T C T A C G T C A G C A T G A T C G C A G T A T C G G T A C T A C G A G T C A G T C G A T C G C A T C A G T A G T C
A C G T T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TCCCTCSRGGTGHSCCCTTC-
-----TTGGGGGCGCCCCTAG
 A G C T G T A C G T A C A G T C G A C T A G T C T A C G T C A G C A T G A T C G C A G T A T C G G T A C T A C G A G T C A G T C G A T C G C A T C A G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTCSRGGTGHSCCCTTC
NTCGCCTCAGGCAAT-------
 A C G T A C G T A G C T G T A C G T A C A G T C G A C T A G T C T A C G T C A G C A T G A T C G C A G T A T C G G T A C T A C G A G T C A G T C G A T C G C A T C A G T A G T C
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--TCCCTCSRGGTGHSCCCTTC
NGTCCCNNGGGA----------
 A C G T A C G T A G C T G T A C G T A C A G T C G A C T A G T C T A C G T C A G C A T G A T C G C A G T A T C G G T A C T A C G A G T C A G T C G A T C G C A T C A G T A G T C
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:TCCCTCSRGGTGHSCCCTTC
CCCCCCCGGGGGGGT-----
 A G C T G T A C G T A C A G T C G A C T A G T C T A C G T C A G C A T G A T C G C A G T A T C G G T A C T A C G A G T C A G T C G A T C G C A T C A G T A G T C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TCCCTCSRGGTGHSCCCTTC
NCCCCCCCGGGGGGN------
 A C G T A G C T G T A C G T A C A G T C G A C T A G T C T A C G T C A G C A T G A T C G C A G T A T C G G T A C T A C G A G T C A G T C G A T C G C A T C A G T A G T C
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T