Information for 9-CGTTTTTTCC (Motif 40)

A G T C A T C G C G A T C A G T A C G T A G C T A G C T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C T G A C T G A C G T A G C T A C G T A T A G C C T A G
p-value:1e-11
log p-value:-2.667e+01
Information Content per bp:1.854
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif17.2
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets89.7 +/- 51.5bp
Average Position of motif in Background94.4 +/- 62.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.77
Offset:4
Orientation:forward strand
Alignment:CGTTTTTTCC-
----TTTTCCA
 A G T C A T C G C G A T C A G T A C G T A G C T A G C T A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.74
Offset:3
Orientation:forward strand
Alignment:CGTTTTTTCC---
---ATTTTCCATT
 A G T C A T C G C G A T C A G T A C G T A G C T A G C T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:3
Score:0.73
Offset:3
Orientation:forward strand
Alignment:CGTTTTTTCC---
---ATTTTCCATT
 A G T C A T C G C G A T C A G T A C G T A G C T A G C T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CGTTTTTTCC---
---ATTTTCCATT
 A G T C A T C G C G A T C A G T A C G T A G C T A G C T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFATC4/MA1525.1/Jaspar

Match Rank:5
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CGTTTTTTCC---
---ATTTTCCATN
 A G T C A T C G C G A T C A G T A C G T A G C T A G C T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C G T C A G T A C G T A C G T A G T C A G T C C T G A G A C T A G C T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CGTTTTTTCC---
---ATTTTCCATT
 A G T C A T C G C G A T C A G T A C G T A G C T A G C T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGTTTTTTCC----
TTTTTTTTCNNGTN
 A G T C A T C G C G A T C A G T A C G T A G C T A G C T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGTTTTTTCC----
WCATTTTGKCCTCYT
 A C G T A G T C A T C G C G A T C A G T A C G T A G C T A G C T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------CGTTTTTTCC----
NTGACTCANTTTTTCCANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G C G A T C A G T A C G T A G C T A G C T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGTTTTTTCC
GGGGATTTCC
 A G T C A T C G C G A T C A G T A C G T A G C T A G C T A C G T A G T C A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C