Information for 13-TAAHTGWAATSAAAT (Motif 41)

A C G T C G T A C T G A G T C A C A G T C T A G C G A T G T C A G C T A A C G T A T C G C G T A C T G A C G T A C G A T
Reverse Opposite:
G C T A C G A T A G C T A C G T T A G C C G T A C G A T A C G T C G T A A G T C G T C A C A G T G A C T G C A T G T C A
p-value:1e-11
log p-value:-2.619e+01
Information Content per bp:1.678
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets116.8 +/- 53.7bp
Average Position of motif in Background142.5 +/- 53.9bp
Strand Bias (log2 ratio + to - strand density)2.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.75
Offset:3
Orientation:forward strand
Alignment:TAAHTGWAATSAAAT
---HDGYAATGAAAN
 A C G T C G T A C T G A G T C A C A G T C T A G C G A T G T C A G C T A A C G T A T C G C G T A C T G A C G T A C G A T
A C G T A C G T A C G T G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:2
Score:0.73
Offset:4
Orientation:forward strand
Alignment:TAAHTGWAATSAAAT
----GGYAATGAAA-
 A C G T C G T A C T G A G T C A C A G T C T A G C G A T G T C A G C T A A C G T A T C G C G T A C T G A C G T A C G A T
A C G T A C G T A C G T A C G T C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TAAHTGWAATSAAAT---
--TAGGTAATAAAATTCA
 A C G T C G T A C T G A G T C A C A G T C T A G C G A T G T C A G C T A A C G T A T C G C G T A C T G A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TAAHTGWAATSAAAT
----GGCMATGAAA-
 A C G T C G T A C T G A G T C A C A G T C T A G C G A T G T C A G C T A A C G T A T C G C G T A C T G A C G T A C G A T
A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T C A T C G A A C G T T C A G C G T A C G T A C G T A A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TAAHTGWAATSAAAT--
-TAAGGTAATAAAATTA
 A C G T C G T A C T G A G T C A C A G T C T A G C G A T G T C A G C T A A C G T A T C G C G T A C T G A C G T A C G A T A C G T A C G T
A C G T C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TAAHTGWAATSAAAT-
----GGAAGTGAAAST
 A C G T C G T A C T G A G T C A C A G T C T A G C G A T G T C A G C T A A C G T A T C G C G T A C T G A C G T A C G A T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

HOXD9/MA0913.2/Jaspar

Match Rank:7
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TAAHTGWAATSAAAT
-----GCAATAAAAC
 A C G T C G T A C T G A G T C A C A G T C T A G C G A T G T C A G C T A A C G T A T C G C G T A C T G A C G T A C G A T
A C G T A C G T A C G T A C G T A C G T T C A G A G T C G T C A T C G A C G A T G C T A C G T A C G T A G T C A G A T C

HOXA10/MA0899.1/Jaspar

Match Rank:8
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TAAHTGWAATSAAAT
----GGTAATAAAAA
 A C G T C G T A C T G A G T C A C A G T C T A G C G A T G T C A G C T A A C G T A T C G C G T A C T G A C G T A C G A T
A C G T A C G T A C G T A C G T C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A

PH0013.1_Cdx2/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TAAHTGWAATSAAAT--
-AAAGGTAATAAAATTT
 A C G T C G T A C T G A G T C A C A G T C T A G C G A T G T C A G C T A A C G T A T C G C G T A C T G A C G T A C G A T A C G T A C G T
A C G T C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TAAHTGWAATSAAAT
------NATTCAAAT
 A C G T C G T A C T G A G T C A C A G T C T A G C G A T G T C A G C T A A C G T A T C G C G T A C T G A C G T A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T