Information for 12-TTCGTAAGCC (Motif 46)

A G C T G A C T A G T C A C T G A C G T C G T A C G T A A C T G A T G C A G T C
Reverse Opposite:
A C T G A T C G A G T C A C G T C G A T C G T A G T A C A C T G C G T A C T G A
p-value:1e-11
log p-value:-2.578e+01
Information Content per bp:1.869
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets108.2 +/- 68.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TTCGTAAGCC--
----TAATCCCN
 A G C T G A C T A G T C A C T G A C G T C G T A C G T A A C T G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

GMEB2/MA0862.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTCGTAAGCC
TTACGTAA---
 A C G T A G C T G A C T A G T C A C T G A C G T C G T A C G T A A C T G A T G C A G T C
A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTCGTAAGCC-
---ATAATCCC
 A G C T G A C T A G T C A C T G A C G T C G T A C G T A A C T G A T G C A G T C A C G T
A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTCGTAAGCC-
--CTTAATCCC
 A G C T G A C T A G T C A C T G A C G T C G T A C G T A A C T G A T G C A G T C A C G T
A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

PITX1/MA0682.2/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTCGTAAGCC-
---CTAATCCC
 A G C T G A C T A G T C A C T G A C G T C G T A C G T A A C T G A T G C A G T C A C G T
A C G T A C G T A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C

HOXA9/MA0594.2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTCGTAAGCC
GTCGTAAACG
 A G C T G A C T A G T C A C T G A C G T C G T A C G T A A C T G A T G C A G T C
T C A G G A C T G T A C T C A G A G C T G C T A G C T A G C T A G A T C T A C G

ZBTB6/MA1581.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTCGTAAGCC--
GTCCTTGAGCCCG
 A C G T A G C T G A C T A G T C A C T G A C G T C G T A C G T A A C T G A T G C A G T C A C G T A C G T
C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTCGTAAGCC
--GCTAATCC
 A G C T G A C T A G T C A C T G A C G T C G T A C G T A A C T G A T G C A G T C
A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TTCGTAAGCC-
---TTAATCCG
 A G C T G A C T A G T C A C T G A C G T C G T A C G T A A C T G A T G C A G T C A C G T
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

PITX2/MA1547.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTCGTAAGCC-
---ATAATCCC
 A G C T G A C T A G T C A C T G A C G T C G T A C G T A A C T G A T G C A G T C A C G T
A C G T A C G T A C G T G T C A C G A T C T G A C G T A A C G T A G T C A G T C T G A C