Information for 20-CAGTGCAGGCTGGCT (Motif 63)

A G T C G T C A T A C G A C G T A C T G A G T C C G T A A C T G C A T G A T G C A C G T A T C G C T A G A G T C A G C T
Reverse Opposite:
C T G A A C T G A G T C A T G C C G T A A T C G G A T C A G T C G A C T A C T G A G T C G T C A A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.865e+01
Information Content per bp:1.830
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets101.7 +/- 29.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAGTGCAGGCTGGCT-
CAATGCATTGTGGGTA
 A G T C G T C A T A C G A C G T A C T G A G T C C G T A A C T G C A T G A T G C A C G T A T C G C T A G A G T C A G C T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CAGTGCAGGCTGGCT
AATCGCACTGCATTCCG---
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A T A C G A C G T A C T G A G T C C G T A A C T G C A T G A T G C A C G T A T C G C T A G A G T C A G C T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAGTGCAGGCTGGCT----
---NGTAGGTTGGCATNNN
 A G T C G T C A T A C G A C G T A C T G A G T C C G T A A C T G C A T G A T G C A C G T A T C G C T A G A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CAGTGCAGGCTGGCT
-----CTGTCTGG--
 A G T C G T C A T A C G A C G T A C T G A G T C C G T A A C T G C A T G A T G C A C G T A T C G C T A G A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CAGTGCAGGCTGGCT
-----TWGTCTGV--
 A G T C G T C A T A C G A C G T A C T G A G T C C G T A A C T G C A T G A T G C A C G T A T C G C T A G A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Zic2/MA1629.1/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CAGTGCAGGCTGGCT
CTCACAGCAGGGGG---
 A C G T A C G T A G T C G T C A T A C G A C G T A C T G A G T C C G T A A C T G C A T G A T G C A C G T A T C G C T A G A G T C A G C T
T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CAGTGCAGGCTGGCT
DCHCAGCAGGRGGCC-
 A C G T A G T C G T C A T A C G A C G T A C T G A G T C C G T A A C T G C A T G A T G C A C G T A T C G C T A G A G T C A G C T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CAGTGCAGGCTGGCT---
-NNTNNTGTCTGGNNTNG
 A G T C G T C A T A C G A C G T A C T G A G T C C G T A A C T G C A T G A T G C A C G T A T C G C T A G A G T C A G C T A C G T A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CAGTGCAGGCTGGCT
CACAGCAGGGGG---
 A G T C G T C A T A C G A C G T A C T G A G T C C G T A A C T G C A T G A T G C A C G T A T C G C T A G A G T C A G C T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CAGTGCAGGCTGGCT-
-AGGNCANNGTGACCT
 A G T C G T C A T A C G A C G T A C T G A G T C C G T A A C T G C A T G A T G C A C G T A T C G C T A G A G T C A G C T A C G T
A C G T C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T