Information for 1-AACGGG (Motif 64)

C G T A G T C A G T A C A T C G C T A G A C T G
Reverse Opposite:
A G T C A G T C A T G C A C T G A C G T A C G T
p-value:1e-7
log p-value:-1.818e+01
Information Content per bp:1.828
Number of Target Sequences with motif560.0
Percentage of Target Sequences with motif47.62%
Number of Background Sequences with motif1914.2
Percentage of Background Sequences with motif39.56%
Average Position of motif in Targets100.4 +/- 57.4bp
Average Position of motif in Background101.3 +/- 56.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.34
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AACGGG------
TTGACCGAGAATTCC
 A C G T A C G T A C G T C G T A G T C A G T A C A T C G C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AACGGG------
NNNACCGAGAGTNNN
 A C G T A C G T A C G T C G T A G T C A G T A C A T C G C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

OVOL2/MA1545.1/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AACGGG--
NNNNTAACGGTNN
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A G T A C A T C G C T A G A C T G A C G T A C G T
T A G C C T G A G T A C T C G A A G C T G T C A C T G A A G T C A T C G A T C G C G A T G C T A G A T C

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AACGGG------
GNNACCGAGAATNNN
 A C G T A C G T A C G T C G T A G T C A G T A C A T C G C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

TFCP2/MA0145.3/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AACGGG---
AAACCGGTTT
 A C G T C G T A G T C A G T A C A T C G C T A G A C T G A C G T A C G T A C G T
T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AACGGG--
NHAACBGYYV
 A C G T A C G T C G T A G T C A G T A C A T C G C T A G A C T G A C G T A C G T
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

GRHL2/MA1105.2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AACGGG----
AAAACAGGTTTT
 A C G T A C G T C G T A G T C A G T A C A T C G C T A G A C T G A C G T A C G T A C G T A C G T
T G C A T C G A C T G A C T G A T A G C G C T A C T A G T A C G G A C T G A C T A G C T C A G T

OVOL1/MA1544.1/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AACGGG---
NANATAACGGTTTT
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A G T A C A T C G C T A G A C T G A C G T A C G T A C G T
T A G C C T G A T C G A T C G A A C G T C G T A G T C A G T A C A C T G A C T G C G A T G C A T G A C T G C A T

GRHL1/MA0647.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AACGGG----
AAAACCGGTTTT
 A C G T A C G T C G T A G T C A G T A C A T C G C T A G A C T G A C G T A C G T A C G T A C G T
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

BARHL1/MA0877.2/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AACGGG
CTAAACGG-
 A C G T A C G T A C G T C G T A G T C A G T A C A T C G C T A G A C T G
T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G A C G T