Information for 23-TGCGAATCCT (Motif 66)

A C G T A C T G A T G C T A C G C G T A C T G A A C G T A G T C A G T C C G A T
Reverse Opposite:
C G T A A C T G A C T G C G T A A G C T A C G T A G T C A T C G A G T C C G T A
p-value:1e-7
log p-value:-1.683e+01
Information Content per bp:1.873
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets135.6 +/- 43.6bp
Average Position of motif in Background106.1 +/- 46.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGCGAATCCT
TATGCAAATC--
 A C G T A C G T A C G T A C T G A T G C T A C G C G T A C T G A A C G T A G T C A G T C C G A T
G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TGCGAATCCT
-GCTAATCC-
 A C G T A C T G A T G C T A C G C G T A C T G A A C G T A G T C A G T C C G A T
A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGCGAATCCT
TTATGCAAAT---
 A C G T A C G T A C G T A C G T A C T G A T G C T A C G C G T A C T G A A C G T A G T C A G T C C G A T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGCGAATCCT--
NNCTAATCCCNN
 A C G T A C T G A T G C T A C G C G T A C T G A A C G T A G T C A G T C C G A T A C G T A C G T
G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGCGAATCCT-
-NYTAATCCYB
 A C G T A C T G A T G C T A C G C G T A C T G A A C G T A G T C A G T C C G A T A C G T
A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

POU3F4/MA0789.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGCGAATCCT
TATGCAAAT---
 A C G T A C G T A C G T A C T G A T G C T A C G C G T A C T G A A C G T A G T C A G T C C G A T
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGCGAATCCT
ATATGCAAAT---
 A C G T A C G T A C G T A C G T A C T G A T G C T A C G C G T A C T G A A C G T A G T C A G T C C G A T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGCGAATCCT---
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T A C G T A C T G A T G C T A C G C G T A C T G A A C G T A G T C A G T C C G A T A C G T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGCGAATCCT
ATATGCAAATNNN
 A C G T A C G T A C G T A C G T A C T G A T G C T A C G C G T A C T G A A C G T A G T C A G T C C G A T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

PITX1/MA0682.2/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGCGAATCCT
--CTAATCCC
 A C G T A C T G A T G C T A C G C G T A C T G A A C G T A G T C A G T C C G A T
A C G T A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C