Information for 10-AACTCGAG (Motif 70)

C G T A C G T A A G T C A C G T A G T C A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C T G C G T A A C T G A C G T C G A T
p-value:1e-6
log p-value:-1.529e+01
Information Content per bp:1.967
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets122.3 +/- 47.7bp
Average Position of motif in Background109.0 +/- 37.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AACTCGAG
RSCACTYRAG
 A C G T A C G T C G T A C G T A A G T C A C G T A G T C A C T G C G T A A C T G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AACTCGAG
CCACTTGAA
 A C G T C G T A C G T A A G T C A C G T A G T C A C T G C G T A A C T G
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AACTCGAG
NSCACTYVAV
 A C G T A C G T C G T A C G T A A G T C A C G T A G T C A C T G C G T A A C T G
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AACTCGAG--
GWAAYHTGAKMC
 A C G T A C G T C G T A C G T A A G T C A C G T A G T C A C T G C G T A A C T G A C G T A C G T
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

VDR/MA0693.2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AACTCGAG
TGAACTCA--
 A C G T A C G T C G T A C G T A A G T C A C G T A G T C A C T G C G T A A C T G
A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AACTCGAG-
ACCACTCAAAA
 A C G T A C G T C G T A C G T A A G T C A C G T A G T C A C T G C G T A A C T G A C G T
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

ZBTB6/MA1581.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AACTCGAG----
GTCCTTGAGCCCG
 A C G T C G T A C G T A A G T C A C G T A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T
C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G

PH0111.1_Nkx2-2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AACTCGAG----
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

ZBTB26/MA1579.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AACTCGAG-------
TACTCCAGAAAAGAT
 C G T A C G T A A G T C A C G T A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C G T A G A T C C G A T T G A C A G T C C T G A C T A G G T C A T C G A T G C A T G C A T C A G G T C A G A C T

CLOCK/MA0819.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AACTCGAG--
AACACGTGTT
 C G T A C G T A A G T C A C G T A G T C A C T G C G T A A C T G A C G T A C G T
C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T